PI0021180 (gene) Melon (PI 482460) v1

Overview


Name	PI0021180
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Zinc finger protein CONSTANS-LIKE 5
Location	chr01: 7452727 .. 7454522 (+)
RNA-Seq Expression	PI0021180
Synteny	PI0021180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATTCCTGATCAATTCTACTATGATGATCAGTATACATCCTTGGCAGCTCCTCCTCCAACCGCGGCGTCTGTGGGCATTGGCGGCGGCCCATTCTGGGGAGATGAAACTGCTGATAATTTAGTTCCTTTGTTGGAGGATGATAATTTTGGGGCTCTTCATCATCATCATCAACCTTATACTGATCATAATCAATATTATTGTTCTTCTAATATTATTGATCCGGCTACGAGGTCGTTTCCTCAACAAGACATGCTACCGTCGTTTCCTTCCCATTCCCATCAGAATAATAATAATGCAAGAGGATCATCATGTCAAGATTTTAATTGTCATCTTGGTTGTCAATTACCAGATCATCAGTTATTCTATGAATTTTCCGACGATGGTTTCGGATTGGTGCCTGAGATCAAACCATCATTTTACAATAATCCTCTCCCTCCCCATAATTGGGTATATATACATATATCTCTTCTCTTCTCTTCGTATGATTACTATTAAATTTATGTTTTAAGAAGTTTAATTATATATATGCAACAATCTCATTTCCTCCTCATCAATTAATAATATTGATTTGATTATATAGGACAATCAAAGCAATCAAGTTTCTGTAGCTGAGGACTCAAACATGAAAGTCGGCCGCTATTCTGAAGAAGTAAGAAAACAAAGGATTCTGCGTTATTTGAAGAAAAGAAATCAAAGAAATTTCAACAAAACCATCAAGGTATCTACCTATCTCTCTCTCTACAATAATTAATTGTAATAATCTTCTCCCACATATACAATATAACACATAATAATTAAATCATAACTATCATCTATATATGATTTTCATTTGGCTGTTCAACTATAAATAATCATATATATATAATAATAATAATAATAATAATAATAATTAAATTTATCATAGTAACACACTAGGGTTTTAACCATTTAGTATTGGGATTTTATAAAGCAATTCTGAAATGGTCAATTAAAATCAACCTCAACTGTTTTTTTAATCATTCAAACAAAAAATCAATGTTGATGATTTATATAAAATTTCTATTTAAAAATGTAAATTTTAATATTAAATTAATTTAAAGTGATTAAAGATATGTTTTCAAAACTTTTTTTATATAACACTTAGAGTAGTAGGAGTTTCTTATTTATATATTCGTATTAAAATATAAATATAATTAAATTTAATATAATCCATCAACTTTGAATACAGTATGCATGTCGGAAAACCTTAGCGGACCGAAGGATTCGAGTACGAGGGAGATTTGCAAGGAACAATGAAGCAATATCTGATCAAGAACTTAATCCAACGACAAAGAATAATGACACTTCTATTAAAAGAGACACTGAATTACTATACAACCACCATGATTTTGGTGTCCAGGTATCTTGTTTAATATTATAATTTCTTAAAATTAGAAAGGGTGATGACTTTTATTATAATGAAGAGAAAAGGAAAAAATTCGTAAATTGATAAAATATTTTATGGTTTGAATAACTTTTGCAGATGAAAAGGGATGAGGAAGAATGGCTACAAGAAATCTCGAGCCTAATGTATCTACCATATATCAGTAGTTGAGATATGGGGAATGGATGAAGATGATCAAAAGGAGCAGCAAAAAAGAGGAAATTCTTCAAATATTTTAATTATTATAATTGGTGGTGGTAGCTATATATATATATATAGCCTATTTTAATTAATTAATTAATTGACCAACTTAAACTGTTCCCGACTATGTGTTAATTTAATTTTAAGGTCATTCCTAGAATTTTGAAACATAGGAGAGACTAAC

mRNA sequence

ATGGCTTCAATTCCTGATCAATTCTACTATGATGATCAGTATACATCCTTGGCAGCTCCTCCTCCAACCGCGGCGTCTGTGGGCATTGGCGGCGGCCCATTCTGGGGAGATGAAACTGCTGATAATTTAGTTCCTTTGTTGGAGGATGATAATTTTGGGGCTCTTCATCATCATCATCAACCTTATACTGATCATAATCAATATTATTGTTCTTCTAATATTATTGATCCGGCTACGAGGTCGTTTCCTCAACAAGACATGCTACCGTCGTTTCCTTCCCATTCCCATCAGAATAATAATAATGCAAGAGGATCATCATGTCAAGATTTTAATTGTCATCTTGGTTGTCAATTACCAGATCATCAGTTATTCTATGAATTTTCCGACGATGGTTTCGGATTGGTGCCTGAGATCAAACCATCATTTTACAATAATCCTCTCCCTCCCCATAATTGGGACAATCAAAGCAATCAAGTTTCTGTAGCTGAGGACTCAAACATGAAAGTCGGCCGCTATTCTGAAGAAGTAAGAAAACAAAGGATTCTGCGTTATTTGAAGAAAAGAAATCAAAGAAATTTCAACAAAACCATCAAGTATGCATGTCGGAAAACCTTAGCGGACCGAAGGATTCGAGTACGAGGGAGATTTGCAAGGAACAATGAAGCAATATCTGATCAAGAACTTAATCCAACGACAAAGAATAATGACACTTCTATTAAAAGAGACACTGAATTACTATACAACCACCATGATTTTGGTGTCCAGATGAAAAGGGATGAGGAAGAATGGCTACAAGAAATCTCGAGCCTAATGTATCTACCATATATCAGTAGTTGAGATATGGGGAATGGATGAAGATGATCAAAAGGAGCAGCAAAAAAGAGGAAATTCTTCAAATATTTTAATTATTATAATTGGTGGTGGTAGCTATATATATATATATAGCCTATTTTAATTAATTAATTAATTGACCAACTTAAACTGTTCCCGACTATGTGTTAATTTAATTTTAAGGTCATTCCTAGAATTTTGAAACATAGGAGAGACTAAC

Coding sequence (CDS)

ATGGCTTCAATTCCTGATCAATTCTACTATGATGATCAGTATACATCCTTGGCAGCTCCTCCTCCAACCGCGGCGTCTGTGGGCATTGGCGGCGGCCCATTCTGGGGAGATGAAACTGCTGATAATTTAGTTCCTTTGTTGGAGGATGATAATTTTGGGGCTCTTCATCATCATCATCAACCTTATACTGATCATAATCAATATTATTGTTCTTCTAATATTATTGATCCGGCTACGAGGTCGTTTCCTCAACAAGACATGCTACCGTCGTTTCCTTCCCATTCCCATCAGAATAATAATAATGCAAGAGGATCATCATGTCAAGATTTTAATTGTCATCTTGGTTGTCAATTACCAGATCATCAGTTATTCTATGAATTTTCCGACGATGGTTTCGGATTGGTGCCTGAGATCAAACCATCATTTTACAATAATCCTCTCCCTCCCCATAATTGGGACAATCAAAGCAATCAAGTTTCTGTAGCTGAGGACTCAAACATGAAAGTCGGCCGCTATTCTGAAGAAGTAAGAAAACAAAGGATTCTGCGTTATTTGAAGAAAAGAAATCAAAGAAATTTCAACAAAACCATCAAGTATGCATGTCGGAAAACCTTAGCGGACCGAAGGATTCGAGTACGAGGGAGATTTGCAAGGAACAATGAAGCAATATCTGATCAAGAACTTAATCCAACGACAAAGAATAATGACACTTCTATTAAAAGAGACACTGAATTACTATACAACCACCATGATTTTGGTGTCCAGATGAAAAGGGATGAGGAAGAATGGCTACAAGAAATCTCGAGCCTAATGTATCTACCATATATCAGTAGTTGA

Protein sequence

MASIPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWGDETADNLVPLLEDDNFGALHHHHQPYTDHNQYYCSSNIIDPATRSFPQQDMLPSFPSHSHQNNNNARGSSCQDFNCHLGCQLPDHQLFYEFSDDGFGLVPEIKPSFYNNPLPPHNWDNQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPTTKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS

Homology

[Close]

BLAST of PI0021180 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 4.4e-06
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 147 LPPHNWDNQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLA 206
           +P  N +N  N+ ++   +     + S   R+ R+LRY +KR  R F KTI+YA RK  A
Sbjct: 255 VPDGNTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYA 314

Query: 207 DRRIRVRGRFARNNEAISD 226
           + R R++GRFA+  E  +D
Sbjct: 315 ESRPRIKGRFAKRTETEND 333

[Close]

BLAST of PI0021180 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 177 RKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELN 230
           R+ R+LRY +K+  R F KTI+YA RK  A++R R++GRFA+  +   D+E N
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDV--DEEAN 336

[Close]

BLAST of PI0021180 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 177 RKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 223
           R+ R+LRY +KR  R F KTI+YA RK  A+ R R++GRFA+  ++
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274

[Close]

BLAST of PI0021180 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.1e-04
Identity = 26/53 (49.06%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 177 RKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELN 230
           R+ R+LRY +KR  R F KTI+YA RK  A+ R RV GRFA+      +Q  N
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKREIEAEEQGFN 358

[Close]

BLAST of PI0021180 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.3e-04
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 177 RKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQE 228
           R+ R+LRY +K+  R F+KTI+YA RK  A+ R R++GRFA+  E  ++ E
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAE 328

[Close]

BLAST of PI0021180 vs. ExPASy TrEMBL
Match: A0A5A7U7B4 (Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G00300 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.3e-141
Identity = 262/287 (91.29%), Postives = 268/287 (93.38%), Query Frame = 0


Query: 1   MAS-IPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWG--DETADNLVPLLEDDNFGALH- 60
           MAS IPDQFYYDD YTS AAPPPTAASVGIGGGPFWG  DETADNLVPLLEDDNFGALH 
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGIGGGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  --HHHQPYTD-HNQYYCSSNIIDPATRSFPQQDMLPSFPSHSHQ-NNNNARGSSCQDFNC 120
              HHQPYTD HNQYY SS+IIDPAT SFPQQDMLPSFPSHSHQ NNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPDHQLFYEFSDDGFGLVPEIKPSFY-NNPLPPHNWDNQSNQVSVAEDSNMKVGR 180
           HLGCQLPDHQLFYEF DD FGLVPEIKPSFY NNPLP HN DNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPT 240
           YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQE+NPT
Sbjct: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           T NNDT+I++DTELLYNHHDFGVQMKRDEEEWLQEISS+MYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 287

[Close]

BLAST of PI0021180 vs. ExPASy TrEMBL
Match: A0A1S3BG50 (uncharacterized protein LOC103489646 OS=Cucumis melo OX=3656 GN=LOC103489646 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.2e-137
Identity = 258/287 (89.90%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MAS-IPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWG--DETADNLVPLLEDDNFGALH- 60
           MAS IPDQFYYDD YTS AAPPPTAASV   GGPFWG  DETADNLVPLLEDDNFGALH 
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASV---GGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  --HHHQPYTD-HNQYYCSSNIIDPATRSFPQQDMLPSFPSHSHQ-NNNNARGSSCQDFNC 120
              HHQPYTD HNQYY SS+IIDPAT SFPQQDMLPSFPSHSHQ NNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPDHQLFYEFSDDGFGLVPEIKPSFY-NNPLPPHNWDNQSNQVSVAEDSNMKVGR 180
           HLGCQLP HQLFYEF DD FGLVPEIKPSFY NNPLP HN DNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPT 240
           YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQE+NPT
Sbjct: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           T NNDT+I++DTELLYNHHDFGVQMKRDEEEWLQEISS+MYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284

[Close]

BLAST of PI0021180 vs. ExPASy TrEMBL
Match: A0A0A0K3I7 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.0e-136
Identity = 249/280 (88.93%), Postives = 256/280 (91.43%), Query Frame = 0


Query: 1   MASIPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWGDETA-DNLVPLLEDDNFGALHHHH 60
           MASIPDQFY+DDQYTSLAAPPPT  SVGIG    WGDETA DNLVPLLEDDNFGAL  HH
Sbjct: 1   MASIPDQFYHDDQYTSLAAPPPTTPSVGIG----WGDETADDNLVPLLEDDNFGAL--HH 60

Query: 61  QPYTDHNQYYCSSNIIDPATRSFPQQDMLPSFPS-HSHQNNNNARGSSCQDFNCHLGCQL 120
           QPYT  NQYYCSSN+ID AT SFPQQDMLP FPS HSHQNN NARGSSCQDFN HLGCQL
Sbjct: 61  QPYTHPNQYYCSSNVIDSATWSFPQQDMLPPFPSAHSHQNNKNARGSSCQDFNSHLGCQL 120

Query: 121 PDHQLFYEFSDDGFGLVPEIKPSFYNNPLPPHNWDNQSNQVSVAEDSNMKVGRYSEEVRK 180
           PDHQLF EF DD FGLVPEIKPSFYNNPLP HNWDNQSNQVSVAEDSNMKVGRYSEEVRK
Sbjct: 121 PDHQLFSEFHDDCFGLVPEIKPSFYNNPLPTHNWDNQSNQVSVAEDSNMKVGRYSEEVRK 180

Query: 181 QRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPTTKNNDTS 240
           +RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFAR NEAISDQELNPT KNNDT+
Sbjct: 181 ERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARKNEAISDQELNPTIKNNDTT 240

Query: 241 IKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           I++DTELLYNHHDFGVQMK DEEEWLQ+ISSLMYLPYISS
Sbjct: 241 IQKDTELLYNHHDFGVQMKGDEEEWLQDISSLMYLPYISS 274

[Close]

BLAST of PI0021180 vs. ExPASy TrEMBL
Match: A0A5D3BX03 (Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00030 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.2e-125
Identity = 239/287 (83.28%), Postives = 245/287 (85.37%), Query Frame = 0


Query: 1   MAS-IPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWG--DETADNLVPLLEDDNFGALH- 60
           MAS IPDQFYYDD YTS AAPPPTAASVGIGGGPFWG  DETADNLVPLLEDDNFGALH 
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGIGGGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  --HHHQPYTD-HNQYYCSSNIIDPATRSFPQQDMLPSFPSHSHQ-NNNNARGSSCQDFNC 120
              HHQPYTD HNQYY SS+IIDPAT SFPQQDMLPSFPSHSHQ NNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPDHQLFYEFSDDGFGLVPEIKPSFY-NNPLPPHNWDNQSNQVSVAEDSNMKVGR 180
           HLGCQLPDHQLFYEF DD FGLVPEIKPSFY NNPLP HN DNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPT 240
           YSEE                       YACRKTLADRRIRVRGRFARNNEAISDQE+NPT
Sbjct: 181 YSEE-----------------------YACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           T NNDT+I++DTELLYNHHDFGVQMKRDEEEWLQEISS+MYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 264

[Close]

BLAST of PI0021180 vs. ExPASy TrEMBL
Match: A0A6J1JLF7 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486274 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 4.2e-68
Identity = 170/290 (58.62%), Postives = 199/290 (68.62%), Query Frame = 0


Query: 1   MASIPDQFYYDDQYTSLAA----------PPPTAASVGIGGGPFWGDETADNLVPLLEDD 60
           MASIP QF+Y D YT+  +          PPPTA    +GGG  WG+ET   LVPL +D 
Sbjct: 1   MASIP-QFFYTD-YTATTSLIPNDFCEQRPPPTAPP--LGGGVLWGEET---LVPLFDD- 60

Query: 61  NFGALHHHHQPYTDHNQYYCSSNIIDPATRSFPQQDM--LPSFPSHSHQNNNNARGSSCQ 120
            FG    HHQP    +QY      + P   SFP QDM  LP   + S    NNA  + CQ
Sbjct: 61  -FGL---HHQPPISPSQYSSHKPGLTPT--SFPHQDMIALPELNTPSMCATNNA--APCQ 120

Query: 121 DFNCHLGCQLPDHQLFYEFSDDGFGLVPEIKPSFYNNPLPPHNWDNQSNQVSVAEDSNMK 180
           +F C +G Q  DH LF ++ DD F LVPE +P ++  PLPP NW+ QSNQV V+EDSNMK
Sbjct: 121 NF-C-VGYQPDDHPLF-QYPDDCFRLVPETEPLYH--PLPPDNWEIQSNQVPVSEDSNMK 180

Query: 181 VGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEL 240
           VGRYSEEVRK+RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA  DQ+L
Sbjct: 181 VGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA-CDQQL 240

Query: 241 NPTTKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           NPT  N+ +  K DT+LLYN    G Q K+DEEEW++E++ LMYLPYISS
Sbjct: 241 NPTKINHTSIHKVDTQLLYNQDHVGAQRKKDEEEWVEEMTGLMYLPYISS 268

[Close]

BLAST of PI0021180 vs. NCBI nr
Match: KAA0051090.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis melo var. makuwa])

HSP 1 Score: 512.3 bits (1318), Expect = 2.6e-141
Identity = 262/287 (91.29%), Postives = 268/287 (93.38%), Query Frame = 0


Query: 1   MAS-IPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWG--DETADNLVPLLEDDNFGALH- 60
           MAS IPDQFYYDD YTS AAPPPTAASVGIGGGPFWG  DETADNLVPLLEDDNFGALH 
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGIGGGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  --HHHQPYTD-HNQYYCSSNIIDPATRSFPQQDMLPSFPSHSHQ-NNNNARGSSCQDFNC 120
              HHQPYTD HNQYY SS+IIDPAT SFPQQDMLPSFPSHSHQ NNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPDHQLFYEFSDDGFGLVPEIKPSFY-NNPLPPHNWDNQSNQVSVAEDSNMKVGR 180
           HLGCQLPDHQLFYEF DD FGLVPEIKPSFY NNPLP HN DNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPT 240
           YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQE+NPT
Sbjct: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           T NNDT+I++DTELLYNHHDFGVQMKRDEEEWLQEISS+MYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 287

[Close]

BLAST of PI0021180 vs. NCBI nr
Match: XP_008447123.1 (PREDICTED: uncharacterized protein LOC103489646 [Cucumis melo])

HSP 1 Score: 497.7 bits (1280), Expect = 6.7e-137
Identity = 258/287 (89.90%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MAS-IPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWG--DETADNLVPLLEDDNFGALH- 60
           MAS IPDQFYYDD YTS AAPPPTAASV   GGPFWG  DETADNLVPLLEDDNFGALH 
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASV---GGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  --HHHQPYTD-HNQYYCSSNIIDPATRSFPQQDMLPSFPSHSHQ-NNNNARGSSCQDFNC 120
              HHQPYTD HNQYY SS+IIDPAT SFPQQDMLPSFPSHSHQ NNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPDHQLFYEFSDDGFGLVPEIKPSFY-NNPLPPHNWDNQSNQVSVAEDSNMKVGR 180
           HLGCQLP HQLFYEF DD FGLVPEIKPSFY NNPLP HN DNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPT 240
           YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQE+NPT
Sbjct: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           T NNDT+I++DTELLYNHHDFGVQMKRDEEEWLQEISS+MYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284

[Close]

BLAST of PI0021180 vs. NCBI nr
Match: XP_011659034.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KAE8646103.1 hypothetical protein Csa_016552 [Cucumis sativus])

HSP 1 Score: 493.0 bits (1268), Expect = 1.6e-135
Identity = 249/280 (88.93%), Postives = 256/280 (91.43%), Query Frame = 0


Query: 1   MASIPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWGDETA-DNLVPLLEDDNFGALHHHH 60
           MASIPDQFY+DDQYTSLAAPPPT  SVGIG    WGDETA DNLVPLLEDDNFGAL  HH
Sbjct: 3   MASIPDQFYHDDQYTSLAAPPPTTPSVGIG----WGDETADDNLVPLLEDDNFGAL--HH 62

Query: 61  QPYTDHNQYYCSSNIIDPATRSFPQQDMLPSFPS-HSHQNNNNARGSSCQDFNCHLGCQL 120
           QPYT  NQYYCSSN+ID AT SFPQQDMLP FPS HSHQNN NARGSSCQDFN HLGCQL
Sbjct: 63  QPYTHPNQYYCSSNVIDSATWSFPQQDMLPPFPSAHSHQNNKNARGSSCQDFNSHLGCQL 122

Query: 121 PDHQLFYEFSDDGFGLVPEIKPSFYNNPLPPHNWDNQSNQVSVAEDSNMKVGRYSEEVRK 180
           PDHQLF EF DD FGLVPEIKPSFYNNPLP HNWDNQSNQVSVAEDSNMKVGRYSEEVRK
Sbjct: 123 PDHQLFSEFHDDCFGLVPEIKPSFYNNPLPTHNWDNQSNQVSVAEDSNMKVGRYSEEVRK 182

Query: 181 QRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPTTKNNDTS 240
           +RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFAR NEAISDQELNPT KNNDT+
Sbjct: 183 ERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARKNEAISDQELNPTIKNNDTT 242

Query: 241 IKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           I++DTELLYNHHDFGVQMK DEEEWLQ+ISSLMYLPYISS
Sbjct: 243 IQKDTELLYNHHDFGVQMKGDEEEWLQDISSLMYLPYISS 276

[Close]

BLAST of PI0021180 vs. NCBI nr
Match: TYK02679.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis melo var. makuwa])

HSP 1 Score: 458.4 bits (1178), Expect = 4.5e-125
Identity = 239/287 (83.28%), Postives = 245/287 (85.37%), Query Frame = 0


Query: 1   MAS-IPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWG--DETADNLVPLLEDDNFGALH- 60
           MAS IPDQFYYDD YTS AAPPPTAASVGIGGGPFWG  DETADNLVPLLEDDNFGALH 
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGIGGGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  --HHHQPYTD-HNQYYCSSNIIDPATRSFPQQDMLPSFPSHSHQ-NNNNARGSSCQDFNC 120
              HHQPYTD HNQYY SS+IIDPAT SFPQQDMLPSFPSHSHQ NNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPDHQLFYEFSDDGFGLVPEIKPSFY-NNPLPPHNWDNQSNQVSVAEDSNMKVGR 180
           HLGCQLPDHQLFYEF DD FGLVPEIKPSFY NNPLP HN DNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPT 240
           YSEE                       YACRKTLADRRIRVRGRFARNNEAISDQE+NPT
Sbjct: 181 YSEE-----------------------YACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           T NNDT+I++DTELLYNHHDFGVQMKRDEEEWLQEISS+MYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 264

[Close]

BLAST of PI0021180 vs. NCBI nr
Match: XP_038888885.1 (two-component response regulator-like APRR1 [Benincasa hispida])

HSP 1 Score: 357.8 bits (917), Expect = 8.2e-95
Identity = 205/287 (71.43%), Postives = 224/287 (78.05%), Query Frame = 0


Query: 1   MASIPDQFYYDDQYTSLAAPPPTAASVGIGGGPFWGDETADNLVPLLEDDNFGALHHHHQ 60
           MASIP QFY D   + +AAPP TAASVG GGGPFWG++   NLVPLL+D  FG LH    
Sbjct: 1   MASIP-QFYCDQYSSVVAAPPSTAASVGTGGGPFWGEDQT-NLVPLLDD--FGLLHDQPT 60

Query: 61  PYTDHNQYYCSSNI-IDPATRSFPQQDML--------PSFPSHSHQNNNNARGSSCQDFN 120
            Y+ ++       + IDPAT SF QQDML        PS     H +N  A     Q+F 
Sbjct: 61  QYSSNSDKIIIPALPIDPATTSFSQQDMLAFPQLNIIPSSMCGIHDHNAAAPAEGSQNF- 120

Query: 121 CHLGCQLPDHQLFYEFSDDGFGLVPEIKPSFYNNPLPPHNWDNQSNQVSVAEDSNMKVGR 180
           CHLGCQ PDHQ FYEFSDD FGLVPEIKP ++  PLPPHNW+NQSNQV VAEDSNMKVGR
Sbjct: 121 CHLGCQ-PDHQ-FYEFSDDCFGLVPEIKPLYH--PLPPHNWENQSNQVPVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPT 240
           YSEEVRK+RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA SDQE+NPT
Sbjct: 181 YSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA-SDQEINPT 240

Query: 241 TKNNDTSIKRDTELLYNHHDFGVQMKRDEEEWLQEISSLMYLPYISS 279
           TK NDTSI +DTELLYN+HDFGVQMKRDEEEWLQEI+SLM LPYISS
Sbjct: 241 TK-NDTSIHKDTELLYNNHDFGVQMKRDEEEWLQEITSLMCLPYISS 276

[Close]

BLAST of PI0021180 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-27
Identity = 74/156 (47.44%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 120 DHQLFYEFSDDGFGLVPEIKPSFYNNPLPPHNWDNQSNQVSVAEDSNMKVGRYSEEVRKQ 179
           DHQ +Y FS       PEIKP F        +W N  ++  +  + N KVGRYS E RK 
Sbjct: 92  DHQEYYGFS-------PEIKPLF-RPATGEQSWGN--SEGGIQAEPNTKVGRYSVEERKD 151

Query: 180 RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQELNPTTKNNDTSI 239
           RI+RYLKK+NQRNFNKTIKY CRKTLADRR+RVRGRFARNN+   +Q     +KN++   
Sbjct: 152 RIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFARNNDTCEEQP--HMSKNHNNHS 211

Query: 240 KRDTELLYNHHDFGVQMKRDEEEWLQE-ISSLMYLP 275
           +++ ++     D+ +QM+ D + WL E +S+L+  P
Sbjct: 212 EKEEDMFSGSDDYLIQMEHD-DGWLHEAMSNLIPFP 234

[Close]

BLAST of PI0021180 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-17
Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 154 NQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVR 213
           ++++ +  +E+ N KVGRYS E RK++I +Y  KRNQRNF KTIKYACRKTLAD R R+R
Sbjct: 192 SENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIR 251

Query: 214 GRFARNNEAI 224
           GRFARN+E +
Sbjct: 252 GRFARNDEVV 261

[Close]

BLAST of PI0021180 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-17
Identity = 67/162 (41.36%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 81  SFPQQDMLPSFPSHSHQNNNNARGSSCQDFNCHLGCQL-PDHQLFYEFSDDGFGLV--PE 140
           SF     LP++ + +    N   GS     N HLG    P H    E   D  GL     
Sbjct: 173 SFLGNTGLPTYMTVTGNMMNTGLGSGFYSGNIHLGSDFKPSHDQLMEIQADNGGLFCPDP 232

Query: 141 IKPSFYNNPLPPH-----NWDNQSNQVS-------------VAEDSNMKVGRYSEEVRKQ 200
           IKP F  NP   H       +NQ++ V+             + + S  KVG+ S E RK+
Sbjct: 233 IKPIF--NPGDHHLQGLDGVENQNHMVAQPVLPQLGTEITGLDDPSFNKVGKLSAEQRKE 292

Query: 201 RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE 222
           +I RY+KKRN+RNF+K IKYACRKTLAD R RVRGRFA+N+E
Sbjct: 293 KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDE 332

[Close]

BLAST of PI0021180 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 82.4 bits (202), Expect = 6.2e-16
Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 143 YNNPLPPHNWDNQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACR 202
           Y++PL     ++    V   ++ +++VGRYS E RK++I +Y  KR QRNF KTIKYACR
Sbjct: 161 YSSPLAA---ESSPTTVFSGDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACR 220

Query: 203 KTLADRRIRVRGRFARNNEAISDQELNPTTKNNDTSIKRDTEL 246
           KTLAD R RVRGRFARN+E       NP   ++ T  + D +L
Sbjct: 221 KTLADNRPRVRGRFARNDEVFE----NPKIASSFTRQENDDDL 256

[Close]

BLAST of PI0021180 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-15
Identity = 58/130 (44.62%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 111 NCHLGCQL-PDHQLFYEFSDD--GFGLVPEIKPSFYNNPLPP--HNWDNQSN-------- 170
           N H+G ++   H    +F  D  GF     IK  F    L       +NQS+        
Sbjct: 225 NIHVGSEINKPHDPLMDFQADNGGFFCPDSIKRMFNPEDLQALGGGAENQSHLVTPQAHP 284

Query: 171 -----QVSVAEDSNM-KVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIR 222
                 ++  EDS + KVG+ S E RK++I RY+KKRN+RNFNK IKYACRKTLAD R R
Sbjct: 285 ALGPVDINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPR 344

The following BLAST results are available for this feature:

BLAST of PI0021180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHH8	4.4e-06	37.97	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
O50055	1.1e-04	47.17	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q9SK53	2.4e-04	50.00	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q39057	4.1e-04	49.06	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]
Q96502	5.3e-04	47.06	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1...	[more]

BLAST of PI0021180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7B4	1.3e-141	91.29	Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BG50	3.2e-137	89.90	uncharacterized protein LOC103489646 OS=Cucumis melo OX=3656 GN=LOC103489646 PE=...	[more]
A0A0A0K3I7	8.0e-136	88.93	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV...	[more]
A0A5D3BX03	2.2e-125	83.28	Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1JLF7	4.2e-68	58.62	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of PI0021180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051090.1	2.6e-141	91.29	zinc finger protein CONSTANS-LIKE 5 [Cucumis melo var. makuwa]	[more]
XP_008447123.1	6.7e-137	89.90	PREDICTED: uncharacterized protein LOC103489646 [Cucumis melo]	[more]
XP_011659034.1	1.6e-135	88.93	zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KAE8646103.1 hypothetical...	[more]
TYK02679.1	4.5e-125	83.28	zinc finger protein CONSTANS-LIKE 5 [Cucumis melo var. makuwa]	[more]
XP_038888885.1	8.2e-95	71.43	two-component response regulator-like APRR1 [Benincasa hispida]	[more]

BLAST of PI0021180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12890.1	1.2e-27	47.44	activator of spomin::LUC2	[more]
AT5G41380.1	1.5e-17	61.43	CCT motif family protein	[more]
AT1G04500.1	1.9e-17	41.36	CCT motif family protein	[more]
AT1G63820.1	6.2e-16	47.57	CCT motif family protein	[more]
AT2G33350.2	1.4e-15	44.62	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 177..219 e-value: 3.0E-16 score: 59.2
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 177..219 score: 14.802668
None	No IPR available	PANTHER	PTHR31717:SF56	ACTIVATOR OF SPOMIN::LUC2	coord: 1..278
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021180.1	PI0021180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding