PI0021166 (gene) Melon (PI 482460) v1

Overview


Name	PI0021166
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	conserved peptide upstream open reading frame 37
Location	chr01: 1536591 .. 1536863 (-)
RNA-Seq Expression	PI0021166
Synteny	PI0021166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCATTGAAACATGAAAATGGGATTGCTGGGAAGCCAACAATTATTGTTAAAGTGATAGCATGTTTTCAACCTTTGCAGAATTGCCAGGTATCCACAGCTTGGTTTCTTAACCCTATACATGGTCAATAATTTTTGTTACTGAAGATCATCGACTCCTGGAACTATATGGTTAACCTTCCCGTGGTTTTTTTTTTCCAGGCCGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

mRNA sequence

ATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCATTGAAACATGAAAATGGGATTGCTGGGAAGCCAACAATTATTGTTAAAGTGATAGCATGTTTTCAACCTTTGCAGAATTGCCAGGCCGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

Coding sequence (CDS)

ATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCATTGAAACATGAAAATGGGATTGCTGGGAAGCCAACAATTATTGTTAAAGTGATAGCATGTTTTCAACCTTTGCAGAATTGCCAGGCCGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

Protein sequence

MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT

Homology

[Close]

BLAST of PI0021166 vs. ExPASy TrEMBL
Match: A0A0A0K458 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. ExPASy TrEMBL
Match: A0A1S4E0J3 (uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495379 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. ExPASy TrEMBL
Match: W9R7U4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.5e-22
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. ExPASy TrEMBL
Match: A0A2P5AUS4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_298860 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-21
Identity = 50/53 (94.34%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAG+PTIIV+VIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGRPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. ExPASy TrEMBL
Match: A0A2P5EP76 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_168420 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-21
Identity = 50/53 (94.34%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAG+PTIIV+VIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGRPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. NCBI nr
Match: XP_016901746.1 (PREDICTED: uncharacterized protein LOC103495379 isoform X2 [Cucumis melo])

HSP 1 Score: 114.8 bits (286), Expect = 2.3e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. NCBI nr
Match: KAE8645821.1 (hypothetical protein Csa_023855, partial [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 2.3e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 7  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 59

[Close]

BLAST of PI0021166 vs. NCBI nr
Match: KAG7022534.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 113.2 bits (282), Expect = 6.7e-22
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGI GKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIGGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. NCBI nr
Match: EXB57311.1 (hypothetical protein L484_011398 [Morus notabilis])

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. NCBI nr
Match: KAF3435071.1 (hypothetical protein FNV43_RR22158 [Rhamnella rubrinervis])

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of PI0021166 vs. TAIR 10
Match: AT5G50011.1 (conserved peptide upstream open reading frame 37 )

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-18
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQ+A QTRFR LKHE+GI G   I+V+VIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 1  MVCQSAGQTRFRTLKHEHGITG--NIVVRVIACFQPLQDCQAEYFRQLLKPVT 51

[Close]

BLAST of PI0021166 vs. TAIR 10
Match: AT5G09461.1 (conserved peptide upstream open reading frame 43 )

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-17
Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHE-NGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MV Q+A QTRFR  K+E NG + +PTI+V+VIACFQP+ NCQAEYFRH+LKPVT
Sbjct: 1  MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYFRHILKPVT 54

[Close]

BLAST of PI0021166 vs. TAIR 10
Match: AT5G64341.1 (conserved peptide upstream open reading frame 40 )

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-16
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 54
          MVCQ+  +TRFR LK+E G A + TI+V+VI C+QP+ NCQAEYFR LLKPVT
Sbjct: 1  MVCQSPGKTRFRGLKYETGNANESTIVVRVIECYQPMDNCQAEYFRLLLKPVT 53

The following BLAST results are available for this feature:

BLAST of PI0021166 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K458	1.1e-22	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1	[more]
A0A1S4E0J3	1.1e-22	100.00	uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
W9R7U4	9.5e-22	96.23	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1	[more]
A0A2P5AUS4	2.1e-21	94.34	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_298860 PE...	[more]
A0A2P5EP76	2.1e-21	94.34	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_168420 PE=4 SV...	[more]

BLAST of PI0021166 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901746.1	2.3e-22	100.00	PREDICTED: uncharacterized protein LOC103495379 isoform X2 [Cucumis melo]	[more]
KAE8645821.1	2.3e-22	100.00	hypothetical protein Csa_023855, partial [Cucumis sativus]	[more]
KAG7022534.1	6.7e-22	98.11	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
EXB57311.1	2.0e-21	96.23	hypothetical protein L484_011398 [Morus notabilis]	[more]
KAF3435071.1	2.0e-21	96.23	hypothetical protein FNV43_RR22158 [Rhamnella rubrinervis]	[more]

BLAST of PI0021166 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50011.1	1.3e-18	77.36	conserved peptide upstream open reading frame 37	[more]
AT5G09461.1	1.1e-17	70.37	conserved peptide upstream open reading frame 43	[more]
AT5G64341.1	2.6e-16	66.04	conserved peptide upstream open reading frame 40	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35281:SF4	SUBFAMILY NOT NAMED	coord: 1..53
None	No IPR available	PANTHER	PTHR35281	BNAA02G34170D PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021166.1	PI0021166.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity