PI0021074 (gene) Melon (PI 482460) v1

Overview


Name	PI0021074
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transposon Tf2-1 polyprotein isoform X1
Location	chr12: 15467414 .. 15467566 (-)
RNA-Seq Expression	PI0021074
Synteny	PI0021074

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAAAAACGAATTGAAGAGAAGCTCGAAACGTTCGATCAGGAAATCTCTCGAATACGAGTAGAATTGCACAAATTACCAGCGATTGAGGAGAATCTGCTTTCGTTAGCAAAAAGTATAGAGAGGTTGGGAGTGCAAGTAGAGAAATAA

mRNA sequence

ATGGCTCAAAAACGAATTGAAGAGAAGCTCGAAACGTTCGATCAGGAAATCTCTCGAATACGAGTAGAATTGCACAAATTACCAGCGATTGAGGAGAATCTGCTTTCGTTAGCAAAAAGTATAGAGAGGTTGGGAGTGCAAGTAGAGAAATAA

Coding sequence (CDS)

ATGGCTCAAAAACGAATTGAAGAGAAGCTCGAAACGTTCGATCAGGAAATCTCTCGAATACGAGTAGAATTGCACAAATTACCAGCGATTGAGGAGAATCTGCTTTCGTTAGCAAAAAGTATAGAGAGGTTGGGAGTGCAAGTAGAGAAATAA

Protein sequence

MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK

Homology

[Close]

BLAST of PI0021074 vs. ExPASy TrEMBL
Match: A0A5A7UKU8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00900 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.2e-12
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1  MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
          MAQKRIEEKLE FDQ+IS IRVELHKLP IEENL S AKSIERLG+Q EK
Sbjct: 1  MAQKRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEK 50

[Close]

BLAST of PI0021074 vs. ExPASy TrEMBL
Match: A0A5A7TFW5 (tRNA dimethylallyltransferase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001280 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.2e-11
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1   MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
           MAQKR EEKLE FD +IS +RVELH+LPAIEENL++LAKSIERLGVQ EK
Sbjct: 432 MAQKRFEEKLEAFDHKISGMRVELHELPAIEENLMTLAKSIERLGVQEEK 481

[Close]

BLAST of PI0021074 vs. ExPASy TrEMBL
Match: A0A5A7TAD6 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G001160 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.5e-11
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1  MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
          MA KRIEEKLETFDQEI+ I+ +LHKLP IEENL+S AKSIERLG+Q EK
Sbjct: 1  MAHKRIEEKLETFDQEITGIQTKLHKLPTIEENLVSSAKSIERLGIQAEK 50

[Close]

BLAST of PI0021074 vs. ExPASy TrEMBL
Match: A0A5A7TWS7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004600 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-10
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1  MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
          MAQKRIEEKLET DQEIS IR ELH LP+I+E++ SLAKSIERLGVQ E+
Sbjct: 1  MAQKRIEEKLETVDQEISGIRAELHGLPSIKEDISSLAKSIERLGVQAEQ 50

[Close]

BLAST of PI0021074 vs. ExPASy TrEMBL
Match: A0A5D3DHM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00650 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.9e-10
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
          MAQKRIEEKL+  DQ+ S IRVELHKL  IEENL S+AKSIERLG+Q EK
Sbjct: 1  MAQKRIEEKLKPVDQDTSSIRVELHKLSTIEENLASMAKSIERLGIQAEK 50

[Close]

BLAST of PI0021074 vs. NCBI nr
Match: KAA0054161.1 (uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 4.6e-12
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1  MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
          MAQKRIEEKLE FDQ+IS IRVELHKLP IEENL S AKSIERLG+Q EK
Sbjct: 1  MAQKRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEK 50

[Close]

BLAST of PI0021074 vs. NCBI nr
Match: KAA0040936.1 (tRNA dimethylallyltransferase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 6.6e-11
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1   MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
           MAQKR EEKLE FD +IS +RVELH+LPAIEENL++LAKSIERLGVQ EK
Sbjct: 432 MAQKRFEEKLEAFDHKISGMRVELHELPAIEENLMTLAKSIERLGVQEEK 481

[Close]

BLAST of PI0021074 vs. NCBI nr
Match: KAA0038345.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYJ97050.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1  MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
          MA KRIEEKLETFDQEI+ I+ +LHKLP IEENL+S AKSIERLG+Q EK
Sbjct: 1  MAHKRIEEKLETFDQEITGIQTKLHKLPTIEENLVSSAKSIERLGIQAEK 50

[Close]

BLAST of PI0021074 vs. NCBI nr
Match: KAA0045921.1 (uncharacterized protein E6C27_scaffold243G004600 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 9.5e-10
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1  MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
          MAQKRIEEKLET DQEIS IR ELH LP+I+E++ SLAKSIERLGVQ E+
Sbjct: 1  MAQKRIEEKLETVDQEISGIRAELHGLPSIKEDISSLAKSIERLGVQAEQ 50

[Close]

BLAST of PI0021074 vs. NCBI nr
Match: KAA0049778.1 (uncharacterized protein E6C27_scaffold76G001330 [Cucumis melo var. makuwa] >TYK23085.1 uncharacterized protein E5676_scaffold142G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.6e-09
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  MAQKRIEEKLETFDQEISRIRVELHKLPAIEENLLSLAKSIERLGVQVEK 51
          MAQKRIEEKL+  DQ+ S IRVELHKL  IEENL S+AKSIERLG+Q EK
Sbjct: 1  MAQKRIEEKLKPVDQDTSSIRVELHKLSTIEENLASMAKSIERLGIQAEK 50

The following BLAST results are available for this feature:

BLAST of PI0021074 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021074 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKU8	2.2e-12	84.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TFW5	3.2e-11	80.00	tRNA dimethylallyltransferase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7TAD6	5.5e-11	78.00	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G001160...	[more]
A0A5A7TWS7	4.6e-10	78.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DHM5	7.9e-10	76.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0021074 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054161.1	4.6e-12	84.00	uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa]	[more]
KAA0040936.1	6.6e-11	80.00	tRNA dimethylallyltransferase 2 [Cucumis melo var. makuwa]	[more]
KAA0038345.1	1.1e-10	78.00	peroxidase 64 [Cucumis melo var. makuwa] >TYJ97050.1 peroxidase 64 [Cucumis melo...	[more]
KAA0045921.1	9.5e-10	78.00	uncharacterized protein E6C27_scaffold243G004600 [Cucumis melo var. makuwa]	[more]
KAA0049778.1	1.6e-09	76.00	uncharacterized protein E6C27_scaffold76G001330 [Cucumis melo var. makuwa] >TYK2...	[more]

BLAST of PI0021074 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021074.1	PI0021074.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0015074	DNA integration
biological_process	GO:0032259	methylation
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups