PI0020706 (gene) Melon (PI 482460) v1

Overview


Name	PI0020706
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Serine-rich adhesin for platelets-like
Location	chr11: 25463727 .. 25464756 (+)
RNA-Seq Expression	PI0020706
Synteny	PI0020706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATCCCGAATGATGCACCCATCAGTCTGGTGGTCCGAGGGTCGCACCTAATCAGTCTGGTGATCCCAAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCTATTAGTCTGGTGATCCCGGAGGAAACACCCATAAGTGCATGCAGGTACACTATCATAGATAAAGATAATTGTTCACCCATTCATGCATAACACAATAATCATCATACTACCCAGAATAATCATCCAAATATAGAGCCTCAAACAGTCATACTTAGCGGCATACATTCCACAATCACGGGTAAGCATAACATATAGTTTCATGGAAAAAGGTCCACTCATAACAATCAGCTTAACATAAACTGAATTTAAATTCCACATCGTAGTCTCTCATAGCATTTCATGCATCCATATGTTCCTCATTTCACTAAATGGTAGAGAAACCCCTTACCTCGGATGTACTAAGTCCGAAATGCACTACGCAGCAAGGGATGTCCAAAACGCGAGATGGGCAGGCTCCAAACGCCCACTTCTTCGGCGAAAACACAACGCTACGCGGCAAGACAAACACGAGGCGGGAAGACTTAGATCCACGAAATCGAAGAAGCAAAACCAAACCGCGTTAGAGGAGACTTACCTCGCGACAAGAAGAGGCGACCAGAGGGACTCAGAGCGCGACACGGCCCCTCAACTCGCGGGCAAGGAATGGAAAAACCAACTGAATGCGAGGTTGTTCGCGGACGAGGCTAGCGGCAAGAGTACTCACGAACCACACTTCCTTTCGCGAACTAACTCTTCAGCTCGCGATCAAGGGCTTACAGAAAGCTAA

mRNA sequence

ATGGTGATCCCGAATGATGCACCCATCAGTCTGGTGGTCCGAGGGTCGCACCTAATCAGTCTGGTGATCCCAAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCTATTAGTCTGGTGATCCCGGAGGAAACACCCATAAGTGCATGCAGAGAAACCCCTTACCTCGGATGTACTAAGTCCGAAATGCACTACGCAGCAAGGGATGTCCAAAACGCGAGATGGGCAGGCTCCAAACGCCCACTTCTTCGGCGAAAACACAACGCTACGCGGCAAGACAAACACGAGGCGGGAAGACTTAGATCCACGAAATCGAAGAAGCAAAACCAAACCGCGTTAGAGGAGACTTACCTCGCGACAAGAAGAGGCGACCAGAGGGACTCAGAGCGCGACACGGCCCCTCAACTCGCGGGCAAGGAATGGAAAAACCAACTGAATGCGAGGTTGTTCGCGGACGAGGCTAGCGGCAAGAGTACTCACGAACCACACTTCCTTTCGCGAACTAACTCTTCAGCTCGCGATCAAGGGCTTACAGAAAGCTAA

Coding sequence (CDS)

ATGGTGATCCCGAATGATGCACCCATCAGTCTGGTGGTCCGAGGGTCGCACCTAATCAGTCTGGTGATCCCAAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCTATTAGTCTGGTGATCCCGGAGGAAACACCCATAAGTGCATGCAGAGAAACCCCTTACCTCGGATGTACTAAGTCCGAAATGCACTACGCAGCAAGGGATGTCCAAAACGCGAGATGGGCAGGCTCCAAACGCCCACTTCTTCGGCGAAAACACAACGCTACGCGGCAAGACAAACACGAGGCGGGAAGACTTAGATCCACGAAATCGAAGAAGCAAAACCAAACCGCGTTAGAGGAGACTTACCTCGCGACAAGAAGAGGCGACCAGAGGGACTCAGAGCGCGACACGGCCCCTCAACTCGCGGGCAAGGAATGGAAAAACCAACTGAATGCGAGGTTGTTCGCGGACGAGGCTAGCGGCAAGAGTACTCACGAACCACACTTCCTTTCGCGAACTAACTCTTCAGCTCGCGATCAAGGGCTTACAGAAAGCTAA

Protein sequence

MVIPNDAPISLVVRGSHLISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPISLVISKETPISLVISKETPISLVIPKETPISLVIPKETPISLVIPEETPISACRETPYLGCTKSEMHYAARDVQNARWAGSKRPLLRRKHNATRQDKHEAGRLRSTKSKKQNQTALEETYLATRRGDQRDSERDTAPQLAGKEWKNQLNARLFADEASGKSTHEPHFLSRTNSSARDQGLTES

Homology

[Close]

BLAST of PI0020706 vs. ExPASy TrEMBL
Match: A0A5A7U297 (Adhesive plaque matrix protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001980 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.5e-20
Identity = 75/117 (64.10%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 1   MVIPNDAPISLVVRGSHLISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPIS 60
           +VIP++A ISLV+     ISLVIPK+T  S VI K+T ISLVIPK+  ISLVI K+  IS
Sbjct: 41  LVIPSNAHISLVIPKDAHISLVIPKDTHSSPVISKDTHISLVIPKDAHISLVISKDAHIS 100

Query: 61  LVIPKETPISLVISKETPISLVISKETPISLVIPKETPISLVIPKETPISLVIPEET 118
           LVIPK+   SLVI K+T ISLVI K+T ISLVIPK   ISLVIPK+  ISLVIP++T
Sbjct: 101 LVIPKDIHSSLVIPKDTHISLVIPKDTHISLVIPKHAHISLVIPKDAHISLVIPKDT 157

[Close]

BLAST of PI0020706 vs. ExPASy TrEMBL
Match: A0A5D3C8A8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G002070 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.4e-19
Identity = 75/117 (64.10%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 9   ISLVVRGSHLISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETP 68
           ISLV+     ISLVIPK+  ISLVIPK+T  SLVI K+T  SLVIPK+  ISL+IPK+  
Sbjct: 15  ISLVIPSDAHISLVIPKDAHISLVIPKDTHSSLVILKDTHSSLVIPKDVHISLMIPKDAH 74

Query: 69  ISLVISKET-PISLVISKETPISLVIPKETPISLVIPKETPISLVIPEET-PISACR 124
           ISLVI K+T PISLVI K+T  SLVIPK+  ISL+IPK+  ISLVIP++T PIS+ R
Sbjct: 75  ISLVIPKDTVPISLVILKDTHSSLVIPKDVHISLMIPKDAHISLVIPKDTVPISSTR 131

[Close]

BLAST of PI0020706 vs. ExPASy TrEMBL
Match: A0A5A7UNU4 (Adhesive plaque matrix protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00180 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-16
Identity = 69/116 (59.48%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MVIPNDAPISLVVRGSHLISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPIS 60
           +VIP+DA ISLV+     IS VIPK+    +VI K+  ISLVIPK+  ISLVIPK+  IS
Sbjct: 7   LVIPSDAHISLVIPKDAHISRVIPKD----IVILKDAHISLVIPKDAHISLVIPKDAHIS 66

Query: 61  LVIPKETPISLVISKETPISLVISKETPISLVIPKETPISLVIPKETPISLVIPEE 117
           LVIPK+  ISLVI K+  ISLVI  +  I+LVIPK+  IS VIPK+T ISLVIP++
Sbjct: 67  LVIPKDAYISLVIPKDAHISLVIPNDAYITLVIPKDAHISRVIPKDTHISLVIPKD 118

[Close]

BLAST of PI0020706 vs. ExPASy TrEMBL
Match: A0A5A7VAS1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00700 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.0e-14
Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = 0


Query: 27  TPISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPISLVISKETPISLVISKE 86
           T ISLVIP +  ISLVI K+  ISLVIPK+T  SLVIPK+T I LVI K+  ISLVISK+
Sbjct: 3   TSISLVIPSDAHISLVILKDAHISLVIPKDTHSSLVIPKDTHICLVILKDVHISLVISKD 62

Query: 87  TPISLVIPKETPISLVIPKETPISLVIPEET 118
           T  SLVIPK+T ISLVIPK+  ISLVI ++T
Sbjct: 63  THSSLVIPKDTHISLVIPKDAHISLVISKDT 93

[Close]

BLAST of PI0020706 vs. ExPASy TrEMBL
Match: A0A672HSW1 (Uncharacterized protein OS=Salarias fasciatus OX=181472 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.5e-13
Identity = 54/120 (45.00%), Postives = 80/120 (66.67%), Query Frame = 0


Query: 1   MVIPNDAPISLVVRGSHLISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPIS 60
           +V+    P+SLV++ S  +SLV+   TP+S V+   TP+ LV+   TP+SLV+   TP+S
Sbjct: 55  LVLQVSTPLSLVLQVSTPLSLVLQVSTPLSPVLQVSTPLILVLQVSTPLSLVLQVSTPLS 114

Query: 61  LVIPKETPISLVISKETPISLVISKETPISLVIPKETPISLVIPKETPISLVIPEETPIS 120
           LV+   TP+SLV+   TP+ LV+   TP+SLV+   TP+SLV+   TP+SLV+   TP+S
Sbjct: 115 LVLQVSTPLSLVLQVSTPLILVLQVSTPLSLVLQVSTPLSLVLQVSTPLSLVLQVSTPLS 174

[Close]

BLAST of PI0020706 vs. NCBI nr
Match: KAA0050013.1 (Adhesive plaque matrix protein [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-19
Identity = 75/117 (64.10%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 1   MVIPNDAPISLVVRGSHLISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPIS 60
           +VIP++A ISLV+     ISLVIPK+T  S VI K+T ISLVIPK+  ISLVI K+  IS
Sbjct: 41  LVIPSNAHISLVIPKDAHISLVIPKDTHSSPVISKDTHISLVIPKDAHISLVISKDAHIS 100

Query: 61  LVIPKETPISLVISKETPISLVISKETPISLVIPKETPISLVIPKETPISLVIPEET 118
           LVIPK+   SLVI K+T ISLVI K+T ISLVIPK   ISLVIPK+  ISLVIP++T
Sbjct: 101 LVIPKDIHSSLVIPKDTHISLVIPKDTHISLVIPKHAHISLVIPKDAHISLVIPKDT 157

[Close]

BLAST of PI0020706 vs. NCBI nr
Match: TYK07474.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-18
Identity = 75/117 (64.10%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 9   ISLVVRGSHLISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETP 68
           ISLV+     ISLVIPK+  ISLVIPK+T  SLVI K+T  SLVIPK+  ISL+IPK+  
Sbjct: 15  ISLVIPSDAHISLVIPKDAHISLVIPKDTHSSLVILKDTHSSLVIPKDVHISLMIPKDAH 74

Query: 69  ISLVISKET-PISLVISKETPISLVIPKETPISLVIPKETPISLVIPEET-PISACR 124
           ISLVI K+T PISLVI K+T  SLVIPK+  ISL+IPK+  ISLVIP++T PIS+ R
Sbjct: 75  ISLVIPKDTVPISLVILKDTHSSLVIPKDVHISLMIPKDAHISLVIPKDTVPISSTR 131

[Close]

BLAST of PI0020706 vs. NCBI nr
Match: KAA0056768.1 (Adhesive plaque matrix protein [Cucumis melo var. makuwa] >TYJ97591.1 Adhesive plaque matrix protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 4.1e-16
Identity = 69/116 (59.48%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MVIPNDAPISLVVRGSHLISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPIS 60
           +VIP+DA ISLV+     IS VIPK+    +VI K+  ISLVIPK+  ISLVIPK+  IS
Sbjct: 7   LVIPSDAHISLVIPKDAHISRVIPKD----IVILKDAHISLVIPKDAHISLVIPKDAHIS 66

Query: 61  LVIPKETPISLVISKETPISLVISKETPISLVIPKETPISLVIPKETPISLVIPEE 117
           LVIPK+  ISLVI K+  ISLVI  +  I+LVIPK+  IS VIPK+T ISLVIP++
Sbjct: 67  LVIPKDAYISLVIPKDAHISLVIPNDAYITLVIPKDAHISRVIPKDTHISLVIPKD 118

[Close]

BLAST of PI0020706 vs. NCBI nr
Match: KAA0064107.1 (hypothetical protein E6C27_scaffold548G00130 [Cucumis melo var. makuwa] >TYK28640.1 hypothetical protein E5676_scaffold2030G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13
Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = 0


Query: 27  TPISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPISLVISKETPISLVISKE 86
           T ISLVIP +  ISLVI K+  ISLVIPK+T  SLVIPK+T I LVI K+  ISLVISK+
Sbjct: 3   TSISLVIPSDAHISLVILKDAHISLVIPKDTHSSLVIPKDTHICLVILKDVHISLVISKD 62

Query: 87  TPISLVIPKETPISLVIPKETPISLVIPEET 118
           T  SLVIPK+T ISLVIPK+  ISLVI ++T
Sbjct: 63  THSSLVIPKDTHISLVIPKDAHISLVISKDT 93

[Close]

BLAST of PI0020706 vs. NCBI nr
Match: RAQ42777.1 (cell surface protein, partial [Aspergillus flavus])

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-13
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 0


Query: 23  IPKETPISLVIPKETPISLVIPKETPISLVIPKETPISLVIPKETPISLVISKETPISLV 82
           +P ETP+  V+P ETP+   +P ETP+  V+P ETP+  V+P ETP+  V+  ETP+   
Sbjct: 367 VPGETPVQPVVPGETPVQPSVPGETPVQPVVPGETPVQPVVPGETPVQPVVPGETPVQPS 426

Query: 83  ISKETPISLVIPKETPISLVIPKETPISLVIPEETPI--SACRETP 127
           +  ETP+  V+P ETP+  V+P ETP+  V+P ETP+  S   ETP
Sbjct: 427 VPGETPVQPVVPGETPVQPVVPGETPVQPVVPGETPVQPSVPGETP 472

The following BLAST results are available for this feature:

BLAST of PI0020706 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U297	6.5e-20	64.10	Adhesive plaque matrix protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3C8A8	9.4e-19	64.10	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G002070 P...	[more]
A0A5A7UNU4	2.0e-16	59.48	Adhesive plaque matrix protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7VAS1	7.0e-14	67.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A672HSW1	4.5e-13	45.00	Uncharacterized protein OS=Salarias fasciatus OX=181472 PE=4 SV=1	[more]

BLAST of PI0020706 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050013.1	1.3e-19	64.10	Adhesive plaque matrix protein [Cucumis melo var. makuwa]	[more]
TYK07474.1	1.9e-18	64.10	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056768.1	4.1e-16	59.48	Adhesive plaque matrix protein [Cucumis melo var. makuwa] >TYJ97591.1 Adhesive p...	[more]
KAA0064107.1	1.4e-13	67.03	hypothetical protein E6C27_scaffold548G00130 [Cucumis melo var. makuwa] >TYK2864...	[more]
RAQ42777.1	1.9e-13	46.23	cell surface protein, partial [Aspergillus flavus]	[more]

BLAST of PI0020706 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020706.1	PI0020706.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane