PI0020654 (gene) Melon (PI 482460) v1

Overview


Name	PI0020654
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	ribosome maturation protein SBDS
Location	chr03: 21561767 .. 21564858 (+)
RNA-Seq Expression	PI0020654
Synteny	PI0020654

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGATTTAAAATTGGAATAGTTTGTATTTTGTAGAAGGCTGGAGAGGCAAACATTGTAAGTAAACCCCGTTAAGCATATATATATATAAACCAAGTGGAGGGACAAACCTCCGTTGTAATATCAGTATTATCATCGTTTCCCTTTTTAATCCAATCGCCAAACTTTAACGAAGATGTCCCGATCGCTGGTGCAGCCGATCGGGCAGAAACGCCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAAGGTCCTTTCATGGCGTTCTGGCGTGTAAGCTCCCTTAAACTCTATCCTTTCCTCTCTCTCAATTATCGGATTTTCTCTAGTTGTTTGATGGGTTCTTATGATTAAGAAGATGGTATAGCTTTGATGTCATAATAGGACAGTAATTGCAACCAATTTATGATTTATTTGTTAAATGGAGGATCCCCTTGGCTAACCGATTAGGAAAAAGAAAAACATCTTCTAATTGCTAGTGACAACATTAGTTTGAGTGGTAAATTGTCGAAGTAGATGGATATGAGTATAATCCATCAGATCAGTTTTAGATTTTAGGGCTCGAGTTGCAAAGTGTATTATTTGACCTACTTTGGTACTGGTTTACTTTATATTTTATTATTTGTGTTGTATAATTAAATGTGACCAATACGAACTTGAAAATGATGTTGTATAACAGGGAGAAAGATTTGGATGAGGTTTTGCAATCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGAAAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGGTTGGTGGAATTCCTGAATGAATTGTTTTTTTTAATGTTTTTATATCGCATCTAGTAATTTATGGATGATTCTTTTTTTTTGGTGTGTGCATTTGTGATCATTTTTTTAACTGATGAGATTGTTAACTTCCTGGTACTAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTTCGTGATATCGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTATTGATCCAAATCACAGCTCAAAGAAACAGGTAGGTTGATGCTTTTTGCTGAATGTGAGATGAACATTCTTCTGCTTTAGATTCGTATAACTATTAATTCAAGGCCACAATTTTCGGCTGATGTTTTTTATGATATGCAGGCACTAGAGGTTATTCATGAGCTCCAGAAACAGTTCCCAATTAAACGGTCACCTATGAGGTTACGATATATCGTACCCGAACAAAACGTCCCATCTCTCCTTGATAAATTAAATGCTTGGGGTGCTAGTATCGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATTGTGAGTCCGAGTTTCTTCATTGCAATTGTTGCTTTGCTTATGTTCTCCAATTTGCTATCATTTCACTCTTCTTCTAGAACAACTTGAATTCTTTTATTGGTTGTTGGTTCCTGCATGGGTGTCAATGTGGCATTAGTTGCCTATGTGTTGTGTTGGACTAGGCCATGTACGCCTGTATGATATTGCATGATAAATCCTGGGAACGAAGACTTTAGGAAGCAGGCCATCTTGACCTAACCACGAACACAGAAAATTCACCTCTGTTTTCTATGTGAGAAGAATTTCAAGCGAGTCATGCTTAAAAGCAGCTAGTGTTAAGACACATTGAAATGTGAATATTAGTTACTTATATTATTGTGTCACCATTTCTTTTTGCTGGTGGAGTGGGATTGAGAGAAGGAAATCGATTGAAACACTTTACTCAAGGCGTGGATGTATTCGTACCGGTAAATGTATATTTGATAATTAATTGCCATCCTCATGGCAATCAAAGGGATGTATGAGAACGGAGATAGGTAGTAGTGGAAGCCTTTGTATTTATTGTACTTATCATCTCTTTGAAATGGTAACCTGTTTCTATACAGTTGTGATCTTGATGAATTACTTGTAGTACTCGTGACTAACGAGCCGTCCAGAGCTGTTGGTGTTCACTTATTATTAGCTAAAGCTAGTTTCTGCGTTAGTGATCATTCAAGGCATCAATCATTGAAATCATTTTTATGTTGTCAAGTTCCATGGTTTCTCTGGAGTCATCTCCTTGGTATCATTGAAGGCTTCTGCTCACAAGGAGGCTGTTTCTCTGCTTCTCTTTGTTGGTTCAAATGCTCAGTGATCGAGTTTAGACTGTTAAGTTAGTTATTGATTATTAACTTCATATGTGCACTTCCAATTAAGTACTGACAATACTTTGTAGTAGGTTGCACTTCAATGATACTGGGAACTGAGTTTTCATCTTTTTTGGTTGTTCAACAGATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGTAATCCATTAATGAGTGAACTACATGGAAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGAGGACGATTGTGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAATCGGAATCGGCTATTCCTCAGCTAAGTGAAGGTTTACAAAAGCAGACAATCTCTGTCAACAGTGAGAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGGGATGCTACAAAGTTTAGAGAGCATCACAAGAGTGAGTGGCATAAACATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACCGAAGAGGAGTGCACGGTAGAATTGGCAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCATTTTGAACCACCTGTCATGTTATGCTTTGTTGAATAGCTGTGAGGTTTTTGTTCTTCAGTTTTGGTGTGGAAACAATACTATCATTGGCTAGTTGTAACTTACACTTGTTTGACGTTCTCAACATGTCACGCATCGTGTAATGATCTCAGTTTCATAGTTTTGACATTTTAGTGCTTTATGGTCGCGTTGTAAATCAATTCCGTTTTTTTTTTTTT

mRNA sequence

GTAGATTTAAAATTGGAATAGTTTGTATTTTGTAGAAGGCTGGAGAGGCAAACATTGTAAGTAAACCCCGTTAAGCATATATATATATAAACCAAGTGGAGGGACAAACCTCCGTTGTAATATCAGTATTATCATCGTTTCCCTTTTTAATCCAATCGCCAAACTTTAACGAAGATGTCCCGATCGCTGGTGCAGCCGATCGGGCAGAAACGCCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAAGGTCCTTTCATGGCGTTCTGGCGTGGAGAAAGATTTGGATGAGGTTTTGCAATCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGAAAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTTCGTGATATCGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTATTGATCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTTATTCATGAGCTCCAGAAACAGTTCCCAATTAAACGGTCACCTATGAGGTTACGATATATCGTACCCGAACAAAACGTCCCATCTCTCCTTGATAAATTAAATGCTTGGGGTGCTAGTATCGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATTATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGTAATCCATTAATGAGTGAACTACATGGAAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGAGGACGATTGTGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAATCGGAATCGGCTATTCCTCAGCTAAGTGAAGGTTTACAAAAGCAGACAATCTCTGTCAACAGTGAGAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGGGATGCTACAAAGTTTAGAGAGCATCACAAGAGTGAGTGGCATAAACATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACCGAAGAGGAGTGCACGGTAGAATTGGCAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCATTTTGAACCACCTGTCATGTTATGCTTTGTTGAATAGCTGTGAGGTTTTTGTTCTTCAGTTTTGGTGTGGAAACAATACTATCATTGGCTAGTTGTAACTTACACTTGTTTGACGTTCTCAACATGTCACGCATCGTGTAATGATCTCAGTTTCATAGTTTTGACATTTTAGTGCTTTATGGTCGCGTTGTAAATCAATTCCGTTTTTTTTTTTTT

Coding sequence (CDS)

ATGTCCCGATCGCTGGTGCAGCCGATCGGGCAGAAACGCCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAAGGTCCTTTCATGGCGTTCTGGCGTGGAGAAAGATTTGGATGAGGTTTTGCAATCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGAAAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTTCGTGATATCGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTATTGATCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTTATTCATGAGCTCCAGAAACAGTTCCCAATTAAACGGTCACCTATGAGGTTACGATATATCGTACCCGAACAAAACGTCCCATCTCTCCTTGATAAATTAAATGCTTGGGGTGCTAGTATCGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATTATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGTAATCCATTAATGAGTGAACTACATGGAAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGAGGACGATTGTGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAATCGGAATCGGCTATTCCTCAGCTAAGTGAAGGTTTACAAAAGCAGACAATCTCTGTCAACAGTGAGAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGGGATGCTACAAAGTTTAGAGAGCATCACAAGAGTGAGTGGCATAAACATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACCGAAGAGGAGTGCACGGTAGAATTGGCAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCATTTTGA

Protein sequence

MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

Homology

[Close]

BLAST of PI0020654 vs. ExPASy Swiss-Prot
Match: P70122 (Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4)

HSP 1 Score: 257.7 bits (657), Expect = 2.0e-67
Identity = 137/247 (55.47%), Postives = 177/247 (71.66%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MRLR+I+P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      + S D S  QQ  I+C +DP  +R+ + L+   ++  G  EVLS 
Sbjct: 182 EGKKLKEKLKPLMKVVESEDYS--QQLEIVCLIDPGCFREIDELIKKETKGRGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of PI0020654 vs. ExPASy Swiss-Prot
Match: Q5RK30 (Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.4e-67
Identity = 136/247 (55.06%), Postives = 177/247 (71.66%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MRLR+++P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLPVN 181

Query: 184 NVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      + S D S  QQ  I+C +DP  +R+ + L+   ++  G  EVLS 
Sbjct: 182 EGKKLKEKLKPLMKVVESEDYS--QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of PI0020654 vs. ExPASy Swiss-Prot
Match: Q3SWZ6 (Ribosome maturation protein SBDS OS=Bos taurus OX=9913 GN=SBDS PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 7.5e-67
Identity = 137/247 (55.47%), Postives = 176/247 (71.26%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MRLR+I+P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      I S D    QQ  I+C +DP  +R+ + L+   ++  G  EVLS 
Sbjct: 182 EGKKLKEKLKPLIKVIESEDY--GQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of PI0020654 vs. ExPASy Swiss-Prot
Match: Q9Y3A5 (Ribosome maturation protein SBDS OS=Homo sapiens OX=9606 GN=SBDS PE=1 SV=4)

HSP 1 Score: 251.5 bits (641), Expect = 1.4e-65
Identity = 135/247 (54.66%), Postives = 175/247 (70.85%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH+++  N S+K+QALEVI +L+++  I+R+ MRLR+I+P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      I S D    QQ  I+C +DP  +R+ + L+   ++  G  EVL+ 
Sbjct: 182 EGKKLKEKLKPLIKVIESEDY--GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of PI0020654 vs. ExPASy Swiss-Prot
Match: Q5RAZ2 (Ribosome maturation protein SBDS OS=Pongo abelii OX=9601 GN=SBDS PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.4e-65
Identity = 135/247 (54.66%), Postives = 175/247 (70.85%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQ 183
           PETKRPYT+ +IER M++IH+++  N S+K+QALEVI +L+++  I+R+ MRLR+I+P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSF 243
               L +KL      I S D    QQ  I+C +DP  +R+ + L+   ++  G  EVL+ 
Sbjct: 182 EGKKLKEKLKPLIKVIESEDY--GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of PI0020654 vs. ExPASy TrEMBL
Match: A0A5A7UXA4 (Ribosome maturation protein SBDS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00400 PE=3 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 1.1e-198
Identity = 351/359 (97.77%), Postives = 356/359 (99.16%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAW ASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC 300
           CLHEEGDTNVDQYEDD ENVELLPRQLKE+ES+IPQLSE LQKQTISVNS+NAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGDATKFREHHKS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of PI0020654 vs. ExPASy TrEMBL
Match: A0A1S3CRW0 (ribosome maturation protein SBDS OS=Cucumis melo OX=3656 GN=LOC103504043 PE=3 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 1.1e-198
Identity = 351/359 (97.77%), Postives = 356/359 (99.16%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAW ASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC 300
           CLHEEGDTNVDQYEDD ENVELLPRQLKE+ES+IPQLSE LQKQTISVNS+NAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGDATKFREHHKS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of PI0020654 vs. ExPASy TrEMBL
Match: A0A0A0KIY6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G397690 PE=3 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 4.8e-194
Identity = 342/359 (95.26%), Postives = 352/359 (98.05%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVERDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKELKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMR+IHFA+DPNHSSKKQALEVIHELQK FPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKHFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAW ASIVS+DQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSDDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC 300
           CLHEEGDTNVDQYEDD ENVEL PRQLKE++S IPQLSE LQKQTIS+NS+NAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELPPRQLKETKSVIPQLSEALQKQTISINSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGD TKFREH+KSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDVTKFREHYKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of PI0020654 vs. ExPASy TrEMBL
Match: A0A6J1F6G6 (ribosome maturation protein SBDS OS=Cucurbita moschata OX=3662 GN=LOC111442780 PE=3 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 5.4e-185
Identity = 328/360 (91.11%), Postives = 341/360 (94.72%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLN+W ASI+SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR 300
           CLHEEGDTNVDQY +DD ENVEL PR +KESESAIPQLSE LQKQ ISV+  N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           CSTCNV VGDA +FREHHKSEWHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

[Close]

BLAST of PI0020654 vs. ExPASy TrEMBL
Match: A0A6J1IK36 (ribosome maturation protein SBDS OS=Cucurbita maxima OX=3661 GN=LOC111474460 PE=3 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 1.6e-184
Identity = 326/360 (90.56%), Postives = 341/360 (94.72%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLN+W ASI+SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR 300
           CLHEEGDTNVDQY +DD ENVEL PR +KESESAIPQLSE LQKQ ISV+  N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTQKEGKR 300

Query: 301 CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           CSTCNV VGDA +FREHHKSEWHKHN+KRKTKNLPPLTEEEC VE+A+GDSESDLKEYSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNIKRKTKNLPPLTEEECMVEIAIGDSESDLKEYSF 360

[Close]

BLAST of PI0020654 vs. NCBI nr
Match: XP_008466694.1 (PREDICTED: ribosome maturation protein SBDS [Cucumis melo] >KAA0059838.1 ribosome maturation protein SBDS [Cucumis melo var. makuwa] >TYK24793.1 ribosome maturation protein SBDS [Cucumis melo var. makuwa])

HSP 1 Score: 702.2 bits (1811), Expect = 2.3e-198
Identity = 351/359 (97.77%), Postives = 356/359 (99.16%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAW ASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC 300
           CLHEEGDTNVDQYEDD ENVELLPRQLKE+ES+IPQLSE LQKQTISVNS+NAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGDATKFREHHKS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of PI0020654 vs. NCBI nr
Match: XP_004146781.1 (ribosome maturation protein SBDS [Cucumis sativus] >KGN47741.1 hypothetical protein Csa_004177 [Cucumis sativus])

HSP 1 Score: 686.8 bits (1771), Expect = 1.0e-193
Identity = 342/359 (95.26%), Postives = 352/359 (98.05%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVERDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKELKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMR+IHFA+DPNHSSKKQALEVIHELQK FPIKRSPMRLRYIV
Sbjct: 121 TFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKHFPIKRSPMRLRYIV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQNVPSLLDKLNAW ASIVS+DQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSDDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC 300
           CLHEEGDTNVDQYEDD ENVEL PRQLKE++S IPQLSE LQKQTIS+NS+NAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELPPRQLKETKSVIPQLSEALQKQTISINSDNAPKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNVAVGD TKFREH+KSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Sbjct: 301 STCNVAVGDVTKFREHYKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of PI0020654 vs. NCBI nr
Match: XP_038886377.1 (ribosome maturation protein SBDS [Benincasa hispida])

HSP 1 Score: 683.7 bits (1763), Expect = 8.5e-193
Identity = 341/359 (94.99%), Postives = 350/359 (97.49%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQTEICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RYIV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYIV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLNAW ASI+SNDQSGNQQRSIICELDPSFYRDCNPLMSEL GRFEVLSF
Sbjct: 181 PEQNFPSLLDKLNAWSASIISNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC 300
           CLHEEGDTNVDQY+DD ENVEL PRQ+KESESAIPQL+E LQKQTISVNSENA KEGKRC
Sbjct: 241 CLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLNEALQKQTISVNSENAMKEGKRC 300

Query: 301 STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           STCNV VGDAT+FREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGD+ESDLKEYSF
Sbjct: 301 STCNVVVGDATQFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDTESDLKEYSF 359

[Close]

BLAST of PI0020654 vs. NCBI nr
Match: XP_022936066.1 (ribosome maturation protein SBDS [Cucurbita moschata] >KAG7025021.1 Ribosome maturation protein SBDS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 656.8 bits (1693), Expect = 1.1e-184
Identity = 328/360 (91.11%), Postives = 341/360 (94.72%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLN+W ASI+SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR 300
           CLHEEGDTNVDQY +DD ENVEL PR +KESESAIPQLSE LQKQ ISV+  N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           CSTCNV VGDA +FREHHKSEWHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

[Close]

BLAST of PI0020654 vs. NCBI nr
Match: XP_023535044.1 (ribosome maturation protein SBDS [Cucurbita pepo subsp. pepo])

HSP 1 Score: 656.0 bits (1691), Expect = 1.9e-184
Identity = 329/360 (91.39%), Postives = 340/360 (94.44%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           PEQN PSLLDKLNAW ASI+SND SGNQQRSIICELDPSFYRDCNPLMSEL G+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNAWSASIISNDPSGNQQRSIICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR 300
           CLHEEGDTNVDQY +DD ENVEL PR +KESESAIPQLSE LQKQ ISV+  N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 360
           CSTCNV VGDA +FREHHKSEWHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

[Close]

BLAST of PI0020654 vs. TAIR 10
Match: AT1G43860.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-128
Identity = 230/371 (61.99%), Postives = 288/371 (77.63%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MS++LVQP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKD+DEVLQS  VYS
Sbjct: 1   MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAK+KDL  +FG+DD T+IC+ IL++GELQVAGKERE+Q S+QFRDIATIVMQK
Sbjct: 61  NVSKGVLAKSKDLMKSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180
           T NPET+RPYTISM+ERLM EIHFA+DP+ +SKKQAL+VI ELQK FPIKRSPMRLR  V
Sbjct: 121 TINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 180

Query: 181 PEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240
           P QN PSLL+KL  W  S+VS D+SG Q  S +CE++P  +R+C+  +  + GR E+L+ 
Sbjct: 181 PVQNFPSLLEKLKEWDGSVVSKDESGTQM-STVCEMEPGLFRECDSHVRSIQGRLEILAV 240

Query: 241 CLHEEGDTNVDQYEDDCE-----NVELLP--RQLKESESAIPQLSEGLQKQTISVNSE-- 300
            +H EGDT++D Y++  +     +  LLP   + K+    + +LS+ LQKQ IS      
Sbjct: 241 SVHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNIK 300

Query: 301 ---NAPKEGKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMG 360
                 K+G +CSTCN  VG+A ++REH KS+WHKHN+KRKT+ LPP++ +EC  E+ M 
Sbjct: 301 QEGGEEKKGTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPISADECMSEIDMD 360

[Close]

BLAST of PI0020654 vs. TAIR 10
Match: AT2G24500.1 (Zinc finger protein 622 )

HSP 1 Score: 43.5 bits (101), Expect = 4.1e-04
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 0


Query: 297 GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE 339
           G  C++CN    D  + + H+KSEWH++N+KRK   +P +TE
Sbjct: 3   GLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTE 44

[Close]

BLAST of PI0020654 vs. TAIR 10
Match: AT4G31420.1 (Zinc finger protein 622 )

HSP 1 Score: 43.1 bits (100), Expect = 5.4e-04
Identity = 17/42 (40.48%), Postives = 27/42 (64.29%), Query Frame = 0


Query: 297 GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE 339
           G  C+ CN+   D  +   H+KS+WH++N+KRK   +P +TE
Sbjct: 3   GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTE 44

[Close]

BLAST of PI0020654 vs. TAIR 10
Match: AT4G31420.2 (Zinc finger protein 622 )

HSP 1 Score: 43.1 bits (100), Expect = 5.4e-04
Identity = 17/42 (40.48%), Postives = 27/42 (64.29%), Query Frame = 0


Query: 297 GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE 339
           G  C+ CN+   D  +   H+KS+WH++N+KRK   +P +TE
Sbjct: 3   GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTE 44

The following BLAST results are available for this feature:

BLAST of PI0020654 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P70122	2.0e-67	55.47	Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4	[more]
Q5RK30	4.4e-67	55.06	Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1	[more]
Q3SWZ6	7.5e-67	55.47	Ribosome maturation protein SBDS OS=Bos taurus OX=9913 GN=SBDS PE=2 SV=1	[more]
Q9Y3A5	1.4e-65	54.66	Ribosome maturation protein SBDS OS=Homo sapiens OX=9606 GN=SBDS PE=1 SV=4	[more]
Q5RAZ2	1.4e-65	54.66	Ribosome maturation protein SBDS OS=Pongo abelii OX=9601 GN=SBDS PE=2 SV=1	[more]

BLAST of PI0020654 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXA4	1.1e-198	97.77	Ribosome maturation protein SBDS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CRW0	1.1e-198	97.77	ribosome maturation protein SBDS OS=Cucumis melo OX=3656 GN=LOC103504043 PE=3 SV...	[more]
A0A0A0KIY6	4.8e-194	95.26	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G397690 P...	[more]
A0A6J1F6G6	5.4e-185	91.11	ribosome maturation protein SBDS OS=Cucurbita moschata OX=3662 GN=LOC111442780 P...	[more]
A0A6J1IK36	1.6e-184	90.56	ribosome maturation protein SBDS OS=Cucurbita maxima OX=3661 GN=LOC111474460 PE=...	[more]

BLAST of PI0020654 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466694.1	2.3e-198	97.77	PREDICTED: ribosome maturation protein SBDS [Cucumis melo] >KAA0059838.1 ribosom...	[more]
XP_004146781.1	1.0e-193	95.26	ribosome maturation protein SBDS [Cucumis sativus] >KGN47741.1 hypothetical prot...	[more]
XP_038886377.1	8.5e-193	94.99	ribosome maturation protein SBDS [Benincasa hispida]	[more]
XP_022936066.1	1.1e-184	91.11	ribosome maturation protein SBDS [Cucurbita moschata] >KAG7025021.1 Ribosome mat...	[more]
XP_023535044.1	1.9e-184	91.39	ribosome maturation protein SBDS [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0020654 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43860.1	1.2e-128	61.99	sequence-specific DNA binding transcription factors	[more]
AT2G24500.1	4.1e-04	42.86	Zinc finger protein 622	[more]
AT4G31420.1	5.4e-04	40.48	Zinc finger protein 622	[more]
AT4G31420.2	5.4e-04	40.48	Zinc finger protein 622	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily	GENE3D	1.10.10.900		coord: 100..172 e-value: 1.4E-29 score: 103.9
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily	SUPERFAMILY	109728	Hypothetical protein AF0491, middle domain	coord: 98..171
None	No IPR available	GENE3D	3.30.70.240		coord: 174..251 e-value: 2.0E-11 score: 45.7
None	No IPR available	PANTHER	PTHR10927:SF3	BNAANNG06530D PROTEIN	coord: 1..359
IPR018978	Ribosome maturation protein Sdo1/SBDS, C-terminal	PFAM	PF09377	SBDS_C	coord: 110..225 e-value: 3.5E-27 score: 94.7
IPR002140	Ribosome maturation protein Sdo1/SBDS	TIGRFAM	TIGR00291	TIGR00291	coord: 13..231 e-value: 3.4E-51 score: 171.9
IPR019783	Ribosome maturation protein Sdo1/SBDS, N-terminal	PFAM	PF01172	SBDS	coord: 16..102 e-value: 2.5E-29 score: 101.1
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily	GENE3D	3.30.1250.10		coord: 1..96 e-value: 1.3E-39 score: 136.2
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily	SUPERFAMILY	89895	FYSH domain	coord: 13..96
IPR039100	Ribosome maturation protein Sdo1/SBDS-like	PANTHER	PTHR10927	RIBOSOME MATURATION PROTEIN SBDS	coord: 1..359
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 300..322
IPR018023	Ribosome maturation protein SBDS, conserved site	PROSITE	PS01267	UPF0023	coord: 46..65
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 286..329

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020654.1	PI0020654.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042256	mature ribosome assembly
biological_process	GO:0042254	ribosome biogenesis
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding