PI0020649 (gene) Melon (PI 482460) v1

Overview
NamePI0020649
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionLa-related protein 6A
Locationchr04: 1180592 .. 1186070 (+)
RNA-Seq ExpressionPI0020649
SyntenyPI0020649
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGCGATTGACTCCTAGAAATTGCGGGCAAAACATGAAATTCAAAAGCCCTTAACGAAAAGGTGAAATGTTCAAATTACCCTCAACAATGGAGGGTGTTGTCGGCTATTGATATAAAATGGTCCGCGCAAGAACTCATTGAAGTTAGGAGAAACGGAGGGCGTGAAGGTACTTTGTGTTCTTACCGCCTAACGCTTTTCTCCTCCTCACCATGGCCGGCGATGAGCCTCCGACTAAGTCCTCAACCGCCGCCGTCTCTTCCTATGTCGCCGACTCCATCCTCTCGCCCCCACATCAAGATCCCGTCGGATCACCCAGTCACGATGTGCCGGAGATTCATCATTGATATCCGAAGACGATCATGACCAGGGATCCAGGGAGAATCACGATCACGGCCACGAACCCGCGGTTAGAGCCGCTGTTCTCCCTGAGGATCTGAAACAAAGGATTGTTAAGCAGGTAACTCTACCGCCTCTCCCTTCCCCACTCTCCACCGCCCTTCCAATTGAACCTCAAATTTCTTTTCCTTTAGGTTTTGCCTGGTATACAATTTTTGGATTTGTGAATCAGTATGTAAATCCGTTTTTTCCCTCTTGCACATGTATTTGAATTGCAACATGTGACTTTTTGTATATATACTTGCATCGGTTAGTGCAAATATTAGAACGTTAGGAAGCTTATGGTTAGACCATCAACTGCAAAGGGAGTTATGGGATCAATTGGTCATTTCACGTTTGATGCTTTGTTATGTCATTTTTAGTATAGTCTTTTGATGTAAGACCTGAAGAGAGCATTTAGATTTTGACAATTGAATTTCAATTCATTCAGTTTTTTATTATTTTGTTGAGTGTTTCAGTATGCGATCGTCGTCTCATGATTGGTCTAAATATCTTCGCAGGTTGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGGTATGTTACTTGGGTAATGTTCACTTTTATGGAGATTTATTATCTTTCAATGGGAATGGAAACTCCCAGCAGTATTGACCTTCAAATTTTGAACTATTATCTGGAAGAATTTCCTCCCGAGCTAAACATAAAACAATTGAAATTAAGAAAGATTTATACACTTTTAATTGCCTTTTCTACTGTATGACTTATGGAAACCGAGAAGCTTTGATCGCTCTCATTTCACTGATACGGATTGCCTTAAAAATTCCAATATAGCTTTCGTAGACATTTTTAGTTTGTAGTCTAATTTGGCAGCATTTTTTCTTCGAACATAGGAGTTGCTAAGAGTATTAATTTGGAAAAAAGATTCATTCTATGGAAATGCTTCAGGAGTTATTTGTTAGGTCTATTGCTGTGACTTCAATTCTTTAATCAATAAGCAAGGGTTTATTTTCAGATTTTAATTTTTAATCAATCAATTTTTAGTATCAAACTTGAAACTAAGATTATTATTACAAAAGGAATGAAGCCTAACGGATGGCCTAGTTGTGACTAGTGAATTCTTGGGTGTTCAATCATCTGAAACACCCTGTGATTACTTGAACATATCTTGTTGATATAGAAGAGCTCGGGAGGTGGTCTTTCATGTTTTATTCTCTTTTTTTTTTTCCATATTTCCCCCCGTAACTTGGACATTAGTGTAATTTAATAGAATGGTTATATTTTACATGATAACTTGACTAGAGACGAGATGGGGTGATGAGCCATGTAAGAACTTCACAAGTAGCATTTCTTGGACATTTTTTGGTGTAGCATATGATGAATTTTCATGGACCGTTCTGAATTATGCATGGTTAATTGCTGATCGTTTGCTTCTCTATTCATGACATTTTGGGCTTTGATACATGCGGAACACATTTCGTGTGAAGGACCAGAACAAACTAACAGCAATTTATCTCCCAAAGGATTCTAGCCTTTGTTACTTTTGACATCACCTGCACAGCTTCTTTCCCTAGCAATATAGTTTGTTCAATAATATATACTTTTGAATCTGGCGCCGTACAAAAACTATTTACACTTCACTTGAGCTAGAATGTGCCAGATTCTCCTATTTGTTTGCTCATTTTCTCTCGCACTCATATCTTTATTGTTTGCTCATTTCCCTTTTGTCATTGTTCTTCTCTCTCTCTCTCTCTCTTTTAATTGTCCGTAGATTCTGATTTTCCGTAATATCTTGTAGTAACCAATACTGTTATCAATGTACAAATAAATTGAAATTCATTTTCTCTTTATTTTTCTAGTTCCTATAGCTATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCATTCATTTATCACTGCTGCACTGAGGGAGTCCTCTGTTCTTGTAAGATACTTCATTCTTCCTTGTAATTATAGCAACCAATGCCTCTTTTTGCCTGATGCCACGACCACATTTTAATTTACTTGCCAACCACAGGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCTGAGACTAGGGATCCTAAGGTATTTGCTTGTGTACTTATGAAATTAACAATTGTTGTGTAACTTAAACTTATGGTAACTTTATTACATTTCTATGTGGAGTATAGTTATTTACCATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAACGAATTTTTGGAGTGGCTGGACGGTATGCCATTCCTGTTTCCAAAACTATGTAAATATTTCTACATTCACACTTCACTGCATGATTAATTTTTTATTTTTTGTATTTTTAGCATAAGAAGTATCACCATTTGTGACCCACATGTCGTAGACAAGTTGGGGAAAAGCAGCAAGGGTGATGTGCTGATCAGTAATAAGGTAAATTGTGTAACCAGCTGATAGGAATAAAAAAATCAGTTTCTGATTAGAGGGGACATTGTGGTGATGCTTGTGCTTCCCATTTCAGCTCTCGTAATGATTCTGAGGATTGTGGTATATGTTGGTGGATATTTTGCTTCCTTTGTTTCTTTATATTCTCACATTAACCATGAAAGAGTGTTGTCTCAATTTGTTTTCTTTTTTCGAAATCATCATATGTAGACTTTGTAGCAGGACTGACATTTATGAAAAGGTAGTTAGGAAATTTATAAAAAATTGAAGAAGGGTTTTCTTTCACCAGACTGAAATTTTGTTGAAAGTAGCATGTTGGTCCTGAAGATAAGGAGGGAGGACTAATACAACGTCAGTTTGATTGTGCAGGTGGAGAGAAAATTATACGTGTGCACTGTTCAATACAGTATGTTGTATCCAATGTTTTAAGAGTGATGTATCCAATGTTTTAAAAAACTATTGAGGCTTAAGTGTGGTTGCTCGCCTCAAGGCAAGACTCTAACTTTTAGCCTCGACACTTGCGTCTTCATGAAACGCATTGAGACTTAAAATCTCCACACCCTTCCTAATATAGAGGTTTGATTAGAAAAACATTAGTGATTTGCCTTGTTCTTAAAAAATATTGGGGGTTTTTGAGGCCTTGAGTTGGTTATTATATTCCGTAGTTATTATATCCTATGGGTTATAATAGTCTGTGTTTAAGAGGTATACTATTTTAGTATGGGTTAATGAGGAGGGGAGAGTATGTGTGGAAAATAATAAATATCGTAACAAGGAGAGATTTGAAATTAATTATGGGTTACAATAGTTGGAAACACCAACTTCCAACTATTATAATTCGAAGCCCAAACAGTTTGTGGGATGTAGTAGTGTCCACCCAATTGAAGTTGGGGGCCCAAACAGCCCCATAGAGGTTTGAGCTGTGACAAGTTGAACTACTACTTCACTACCATGACCTTGAAAACATTCCAGACAAATTTATTGTATAAATCAATCCTATTAATGAATAGTAGTGATGTTAAAGACATCGTTTTAGAATTTTTGTTTTAAGTGAAAATTTTGGGGTGATTTTTTTCTTTTCACTTTTATAATGACCATTATGTTTAGCAATACTTAATCATATCAATTTAAGATTTGCAAAATATTTTTAATTAATTTGAAGGTAATACCTCTTACTGCCTTGCCTCTTCAAATGGAAAAAGCCTCTCTTTAGACATTGAAAACATTCATGCAGCTATGCTTTGTCTCAGATTTCTTGACGTAAATTGAGTTTACATTAAAAGATCGAACTAACTATGTTTACTCATTCCGCCTTTTTCTTGGTCACTGTATAGTTGCATGCTCTAGTGGAGTATGAGACTCTGGAGGCTTCTGAGAAAGCTGTGAGTAATCAATATGTGCTCTATTTTCTTTAACTTGATAATTATACTGTGTTTGATTTGATATCAATAATCGTTTTTCTGATTGTTCATTAGGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGGTACTGTATCTCATTTCACTTGCATACTTTAAGTTGATTGTATTCACAACGTAGTTTTCAACTTCAGAGTAAGCATGGCCAGAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAACTGACCAGAATGGTCCTGACAAGAACATACCTGGGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCAGAACGTTGTAAATGAGCATCATGACGATGTGCCTGATGAGGAGGTTAACATTGCTCTTATATCTTCTTTTTCTGAGCGCATTTTATTGGGCACACATTTTAATTACAATTTGTTCTTGATTTTTCATCATGTGTTGGTTATTCTCTTCCAACTCCCCTTGGATTGTGAAAATTTCTATGAAGATGTGAGTGCAAGAAAATGCTTGTTGTGTTTGATAACAATATCAACTTTGCCAAATTTAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCGAAATCAAGGACGAACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTACCGACTGATCTGATCACGTTATCTTAAATTTCATGTTAAGAGAAATTTATCTTGATAATCTTTGCACACTTTGTAGGTCATGGAACTACAACTTCTACTCATCACATTGAACTTTCGAAGCCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAATGATAATTTCATCAAAATGGGTCTGTAGAAATTTAACTTTCTATGTTTTTTACTTTGATTGATGGGCATGCTAGAACGCGTCCTGGTATATGTCCAAGTAGTTTGGCCAAAATGTATCTAACCTCAAAAGATTTGTGTCTCGAGAAAATGTTATCTTGTATATTGTTCACTTGTATGCTATGTTTAAATTTGGTGGTTTTGAATTTTTCAACCGAGTCTAATTAAAAATCAAACATTTATTTTAAAATATGAAAACTGTTTATTTAGTTCAATAGGGTGGGGAATTTGAAATAGTAATCCTTTTGTAGAGTA

mRNA sequence

CGGCGATTGACTCCTAGAAATTGCGGGCAAAACATGAAATTCAAAAGCCCTTAACGAAAAGGTGAAATGTTCAAATTACCCTCAACAATGGAGGGTGTTGTCGGCTATTGATATAAAATGGTCCGCGCAAGAACTCATTGAAGTTAGGAGAAACGGAGGGCGTGAAGGTACTTTGTGTTCTTACCGCCTAACGCTTTTCTCCTCCTCACCATGGCCGGCGATGAGCCTCCGACTAAGTCCTCAACCGCCGCCGTCTCTTCCTATGTCGCCGACTCCATCCTCTCGCCCCCACATCAAGATCCCGTCGGATCACCCAGTCACGATGTGCCGGAGATTCATCATTGATATCCGAAGACGATCATGACCAGGGATCCAGGGAGAATCACGATCACGGCCACGAACCCGCGGTTAGAGCCGCTGTTCTCCCTGAGGATCTGAAACAAAGGATTGTTAAGCAGGTTGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGTTCCTATAGCTATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCATTCATTTATCACTGCTGCACTGAGGGAGTCCTCTGTTCTTGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCTGAGACTAGGGATCCTAAGTTATTTACCATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAACGAATTTTTGGAGTGGCTGGACGCATAAGAAGTATCACCATTTGTGACCCACATGTCGTAGACAAGTTGGGGAAAAGCAGCAAGGGTGATGTGCTGATCAGTAATAAGTTGCATGCTCTAGTGGAGTATGAGACTCTGGAGGCTTCTGAGAAAGCTGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGAGTAAGCATGGCCAGAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAACTGACCAGAATGGTCCTGACAAGAACATACCTGGGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCAGAACGTTGTAAATGAGCATCATGACGATGTGCCTGATGAGGAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCGAAATCAAGGACGAACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTCATGGAACTACAACTTCTACTCATCACATTGAACTTTCGAAGCCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAATGATAATTTCATCAAAATGGGTCTGTAGAAATTTAACTTTCTATGTTTTTTACTTTGATTGATGGGCATGCTAGAACGCGTCCTGGTATATGTCCAAGTAGTTTGGCCAAAATGTATCTAACCTCAAAAGATTTGTGTCTCGAGAAAATGTTATCTTGTATATTGTTCACTTGTATGCTATGTTTAAATTTGGTGGTTTTGAATTTTTCAACCGAGTCTAATTAAAAATCAAACATTTATTTTAAAATATGAAAACTGTTTATTTAGTTCAATAGGGTGGGGAATTTGAAATAGTAATCCTTTTGTAGAGTA

Coding sequence (CDS)

ATGAAGAAACTTACACACGATCATTCATTTATCACTGCTGCACTGAGGGAGTCCTCTGTTCTTGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCTGAGACTAGGGATCCTAAGTTATTTACCATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAACGAATTTTTGGAGTGGCTGGACGCATAAGAAGTATCACCATTTGTGACCCACATGTCGTAGACAAGTTGGGGAAAAGCAGCAAGGGTGATGTGCTGATCAGTAATAAGTTGCATGCTCTAGTGGAGTATGAGACTCTGGAGGCTTCTGAGAAAGCTGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGAGTAAGCATGGCCAGAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAACTGACCAGAATGGTCCTGACAAGAACATACCTGGGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCAGAACGTTGTAAATGAGCATCATGACGATGTGCCTGATGAGGAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCGAAATCAAGGACGAACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTCATGGAACTACAACTTCTACTCATCACATTGAACTTTCGAAGCCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAA

Protein sequence

MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Homology
[Close]
BLAST of PI0020649 vs. ExPASy Swiss-Prot
Match: Q94A38 (La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.0e-71
Identity = 151/281 (53.74%), Postives = 204/281 (72.60%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLT DH+ I +AL+ESS LVVS++ KKVKRL P  LPE RDPK+FT+LVENLPEDHS 
Sbjct: 149 MKKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDHSN 208

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA ATL
Sbjct: 209 ENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATL 268

Query: 121 NDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQN 180
           N+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   + T ++
Sbjct: 269 NNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKN---KKTREH 328

Query: 181 GDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTH 240
            +  +      HH D P +++G +  KDK+G++GR  G+ RRQ ++G NG+GHGT +S+ 
Sbjct: 329 QNHRL------HHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSS 388

Query: 241 H-----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS 273
           H     +E+SK PPGP+MPDGTRGFTMGRG+   PPTS Q+
Sbjct: 389 HPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 418

[Close]
BLAST of PI0020649 vs. ExPASy Swiss-Prot
Match: Q9LHL3 (La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 103/282 (36.52%), Postives = 150/282 (53.19%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           +K LT +H  ++ ALR SS LVVS +GKKVKR    +  +  + +  T++ ENLP+DHS 
Sbjct: 190 IKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSY 249

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           +N+++IFGV G +++I IC  H  +      KGD L+SNK+HAL+EY+    ++KAV  L
Sbjct: 250 QNLEKIFGVVGNVKAIRIC--HPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKL 309

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDE++WR G+RV+ L   S     K         +N  G + D   P        + ++G
Sbjct: 310 NDERNWRKGLRVRLLLRCSPKSVLKNR-------RNFDGILIDDELP--------SYESG 369

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGH-------- 240
           ++  +  + E   D     +GD  +      +GR +GR R  +   V G G         
Sbjct: 370 EDSPRLHLTESQLD----NDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGV 429

Query: 241 --GTTTSTHHIELSKP---PPGPKMPDGTRGFTMGRGRPPTS 270
             G  +   H E S P     GP+MPDGTRGFTMGRG+P  S
Sbjct: 430 SLGIPSLGSH-ESSSPKTATKGPRMPDGTRGFTMGRGKPSIS 449

[Close]
BLAST of PI0020649 vs. ExPASy Swiss-Prot
Match: O80567 (La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-25
Identity = 100/317 (31.55%), Postives = 153/317 (48.26%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           +K + +++S + A L+ S+ L VS +GKKV+R+ PI+     + +   I+ ENLPEDH  
Sbjct: 239 IKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCY 298

Query: 61  ENIKRIFGVAGRIRSITICDPH-----VVDKLGKSSKGD-VLISNKLHALVEYETLEASE 120
           +N+ +IF   G +++I  C P             ++K D  L SNK+HA VEYE +E +E
Sbjct: 299 QNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAE 358

Query: 121 KAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPG 180
           +AV  L++  +WR+G++V+  LKH +K           EP K   GR   + G D ++  
Sbjct: 359 RAVTELSEAGNWRSGLKVRLMLKHQTK-----------EP-KQGQGR--GRKGHDADVEH 418

Query: 181 RVTDQNGDEEIQNVVNEHHDDVPDEEE--------GDHQHKDKHG------HRGRNQGRT 240
              D    E  Q  + +  DD   E +        G+ Q  +K        +RGR +GR 
Sbjct: 419 EEDDATTSE--QQPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRG 478

Query: 241 RRQKYKGV------------NGMGHGTTTSTHHIEL------------------SKPPPG 267
           R Q ++              N  G G     HH ++                   + PPG
Sbjct: 479 RGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPG 538

[Close]
BLAST of PI0020649 vs. ExPASy Swiss-Prot
Match: Q05CL8 (La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-08
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLT D   I  AL+ SSV+ +   G +++R  P+     +D +  T+ VE LP++ + 
Sbjct: 74  MKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTH 133

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
             I+R+FG  G +  I+I  PH        S GD     K  A VE+ET E + KA+  L
Sbjct: 134 SWIERVFGKCGNVVYISI--PHY------KSTGD----PKGFAFVEFETKEQAAKAIEFL 182

Query: 121 ND 123
           N+
Sbjct: 194 NN 182

[Close]
BLAST of PI0020649 vs. ExPASy Swiss-Prot
Match: Q5XI01 (La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-08
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLT D   I  AL+ SSV+ +   G +++R  P+     +D +  T+ VE LP++ + 
Sbjct: 75  MKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTH 134

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
             I+R+FG  G +  I+I  PH        S GD     K  A VE+ET E + KA+  L
Sbjct: 135 SWIERVFGKCGNVVYISI--PHY------KSTGD----PKGFAFVEFETKEQAAKAIEFL 183

Query: 121 ND 123
           N+
Sbjct: 195 NN 183

[Close]
BLAST of PI0020649 vs. ExPASy TrEMBL
Match: A0A5D3CMV4 (La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008960 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.7e-146
Identity = 265/273 (97.07%), Postives = 267/273 (97.80%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSE
Sbjct: 119 MKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSE 178

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENIKRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNKLHALVEYETLEASEKAVATL
Sbjct: 179 ENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATL 238

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRI DQNGPDKNIP RVTDQNG
Sbjct: 239 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQNG 298

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH 240
           DEEI NVVNEHHD VPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHH
Sbjct: 299 DEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHH 358

Query: 241 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 274
           IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 359 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 391

[Close]
BLAST of PI0020649 vs. ExPASy TrEMBL
Match: A0A0A0KI36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523320 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145
Identity = 263/273 (96.34%), Postives = 267/273 (97.80%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           M+KLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE
Sbjct: 116 MRKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 175

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           EN+KRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL
Sbjct: 176 ENMKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 235

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDEQDWRNGMRVKPLK MSKHGQRKQHWRGPEPDK SSGRI DQNGPDKNIPGRVTDQNG
Sbjct: 236 NDEQDWRNGMRVKPLKLMSKHGQRKQHWRGPEPDKTSSGRIADQNGPDKNIPGRVTDQNG 295

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH 240
           +EEI NVVNEHHDDVPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHH
Sbjct: 296 NEEIPNVVNEHHDDVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHH 355

Query: 241 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 274
           IELSKPPPGPKMPDGTRGFTMGRGRPPTS QSI
Sbjct: 356 IELSKPPPGPKMPDGTRGFTMGRGRPPTSTQSI 388

[Close]
BLAST of PI0020649 vs. ExPASy TrEMBL
Match: A0A1S3AYU2 (la-related protein 6A OS=Cucumis melo OX=3656 GN=LOC103484374 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.0e-145
Identity = 263/273 (96.34%), Postives = 266/273 (97.44%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSE
Sbjct: 122 MKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSE 181

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENIKRIFGVAGRIRSITICDPHVVDKLGKS+K DVLISNKLHALVEYETLEASEKAVATL
Sbjct: 182 ENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATL 241

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRI DQNGP+KNIP RVTDQNG
Sbjct: 242 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNG 301

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH 240
           DEEI NVVNEHHD VPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHH
Sbjct: 302 DEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHH 361

Query: 241 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 274
           IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 362 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394

[Close]
BLAST of PI0020649 vs. ExPASy TrEMBL
Match: A0A5A7UBI5 (La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001510 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.3e-142
Identity = 265/297 (89.23%), Postives = 267/297 (89.90%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSE
Sbjct: 119 MKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSE 178

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENIKRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNKLHALVEYETLEASEKAVATL
Sbjct: 179 ENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATL 238

Query: 121 NDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDKN 180
           NDEQDWRNGMRVKPLKHM                        SKHGQRKQHWRGPEPDKN
Sbjct: 239 NDEQDWRNGMRVKPLKHMVLYLISLAFFKLIVFYSQCSFQLQSKHGQRKQHWRGPEPDKN 298

Query: 181 SSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQ 240
           SSGRI DQNGPDKNIP RVTDQNGDEEI NVVNEHHD VPDEEEGDHQHKDKHGHRG+NQ
Sbjct: 299 SSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQ 358

Query: 241 GRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 274
           GRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 359 GRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 415

[Close]
BLAST of PI0020649 vs. ExPASy TrEMBL
Match: A0A6J1EHU6 (la-related protein 6A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433532 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.1e-129
Identity = 237/272 (87.13%), Postives = 248/272 (91.18%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLT DHSFI AALRESSVLVVS NGKKVKRLHPI LPETRDPKLFTILVENLPEDHSE
Sbjct: 118 MKKLTQDHSFIAAALRESSVLVVSPNGKKVKRLHPIPLPETRDPKLFTILVENLPEDHSE 177

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENI+RIFG AGRI+SITICDPHVV+K GKSSKG VLISNKLHALVEYETLEASEKAVATL
Sbjct: 178 ENIQRIFGAAGRIKSITICDPHVVEKSGKSSKGGVLISNKLHALVEYETLEASEKAVATL 237

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDEQDWRNGMRVKP KH+ KHGQ+KQHWR  +PDKN +GR+TD + PDKN  GR TDQN 
Sbjct: 238 NDEQDWRNGMRVKPFKHLVKHGQKKQHWRVSDPDKNGTGRLTDHSCPDKNSTGRTTDQNV 297

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH 240
           DEEIQN + EHH+DVPDEEEGDHQHKDKH HRGRNQGRTRRQKYKGVN MGHGTTTS HH
Sbjct: 298 DEEIQN-ITEHHEDVPDEEEGDHQHKDKHRHRGRNQGRTRRQKYKGVNAMGHGTTTSAHH 357

Query: 241 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQS 273
           IEL KPPPGPKMPDGTRGFTMGRGRPPTSNQS
Sbjct: 358 IELPKPPPGPKMPDGTRGFTMGRGRPPTSNQS 388

[Close]
BLAST of PI0020649 vs. NCBI nr
Match: TYK13277.1 (la-related protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 527.3 bits (1357), Expect = 7.7e-146
Identity = 265/273 (97.07%), Postives = 267/273 (97.80%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSE
Sbjct: 119 MKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSE 178

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENIKRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNKLHALVEYETLEASEKAVATL
Sbjct: 179 ENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATL 238

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRI DQNGPDKNIP RVTDQNG
Sbjct: 239 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQNG 298

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH 240
           DEEI NVVNEHHD VPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHH
Sbjct: 299 DEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHH 358

Query: 241 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 274
           IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 359 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 391

[Close]
BLAST of PI0020649 vs. NCBI nr
Match: XP_004134576.1 (la-related protein 6A [Cucumis sativus] >KGN49390.1 hypothetical protein Csa_002950 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 5.0e-145
Identity = 263/273 (96.34%), Postives = 267/273 (97.80%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           M+KLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE
Sbjct: 116 MRKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 175

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           EN+KRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL
Sbjct: 176 ENMKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 235

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDEQDWRNGMRVKPLK MSKHGQRKQHWRGPEPDK SSGRI DQNGPDKNIPGRVTDQNG
Sbjct: 236 NDEQDWRNGMRVKPLKLMSKHGQRKQHWRGPEPDKTSSGRIADQNGPDKNIPGRVTDQNG 295

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH 240
           +EEI NVVNEHHDDVPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHH
Sbjct: 296 NEEIPNVVNEHHDDVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHH 355

Query: 241 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 274
           IELSKPPPGPKMPDGTRGFTMGRGRPPTS QSI
Sbjct: 356 IELSKPPPGPKMPDGTRGFTMGRGRPPTSTQSI 388

[Close]
BLAST of PI0020649 vs. NCBI nr
Match: XP_008439642.1 (PREDICTED: la-related protein 6A [Cucumis melo])

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144
Identity = 263/273 (96.34%), Postives = 266/273 (97.44%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSE
Sbjct: 122 MKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSE 181

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENIKRIFGVAGRIRSITICDPHVVDKLGKS+K DVLISNKLHALVEYETLEASEKAVATL
Sbjct: 182 ENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATL 241

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRI DQNGP+KNIP RVTDQNG
Sbjct: 242 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNG 301

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH 240
           DEEI NVVNEHHD VPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHH
Sbjct: 302 DEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHH 361

Query: 241 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 274
           IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 362 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394

[Close]
BLAST of PI0020649 vs. NCBI nr
Match: XP_038882123.1 (la-related protein 6A [Benincasa hispida])

HSP 1 Score: 517.3 bits (1331), Expect = 8.0e-143
Identity = 258/271 (95.20%), Postives = 264/271 (97.42%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLT DHSFITAALRESSVLV+SSNGKKVKRLHPI LPETRDPKLFTILVENLPEDHSE
Sbjct: 122 MKKLTQDHSFITAALRESSVLVISSNGKKVKRLHPIPLPETRDPKLFTILVENLPEDHSE 181

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENIKRIFG AGRIRSITICDPHVV+KLGKSSKGDVLISNKLHALVEYETLEASEKAVATL
Sbjct: 182 ENIKRIFGAAGRIRSITICDPHVVEKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 241

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDEQDWRNGMRVKPLKH+SKHGQRKQHWRGP+PDKNS+GRITDQ+GPDKNIPGR TDQNG
Sbjct: 242 NDEQDWRNGMRVKPLKHLSKHGQRKQHWRGPDPDKNSTGRITDQSGPDKNIPGRTTDQNG 301

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH 240
           DEEI N VNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTS HH
Sbjct: 302 DEEIHN-VNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSAHH 361

Query: 241 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ 272
           IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ
Sbjct: 362 IELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ 391

[Close]
BLAST of PI0020649 vs. NCBI nr
Match: KAA0052548.1 (la-related protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 513.8 bits (1322), Expect = 8.8e-142
Identity = 265/297 (89.23%), Postives = 267/297 (89.90%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSE
Sbjct: 119 MKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSE 178

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENIKRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNKLHALVEYETLEASEKAVATL
Sbjct: 179 ENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATL 238

Query: 121 NDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDKN 180
           NDEQDWRNGMRVKPLKHM                        SKHGQRKQHWRGPEPDKN
Sbjct: 239 NDEQDWRNGMRVKPLKHMVLYLISLAFFKLIVFYSQCSFQLQSKHGQRKQHWRGPEPDKN 298

Query: 181 SSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQ 240
           SSGRI DQNGPDKNIP RVTDQNGDEEI NVVNEHHD VPDEEEGDHQHKDKHGHRG+NQ
Sbjct: 299 SSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQ 358

Query: 241 GRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 274
           GRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 359 GRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 415

[Close]
BLAST of PI0020649 vs. TAIR 10
Match: AT5G46250.1 (RNA-binding protein )

HSP 1 Score: 269.2 bits (687), Expect = 3.5e-72
Identity = 151/281 (53.74%), Postives = 204/281 (72.60%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLT DH+ I +AL+ESS LVVS++ KKVKRL P  LPE RDPK+FT+LVENLPEDHS 
Sbjct: 149 MKKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDHSN 208

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA ATL
Sbjct: 209 ENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATL 268

Query: 121 NDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQN 180
           N+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   + T ++
Sbjct: 269 NNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKN---KKTREH 328

Query: 181 GDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTH 240
            +  +      HH D P +++G +  KDK+G++GR  G+ RRQ ++G NG+GHGT +S+ 
Sbjct: 329 QNHRL------HHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSS 388

Query: 241 H-----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS 273
           H     +E+SK PPGP+MPDGTRGFTMGRG+   PPTS Q+
Sbjct: 389 HPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 418

[Close]
BLAST of PI0020649 vs. TAIR 10
Match: AT5G46250.2 (RNA-binding protein )

HSP 1 Score: 192.6 bits (488), Expect = 4.2e-49
Identity = 109/202 (53.96%), Postives = 142/202 (70.30%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLT DH+ I +AL+ESS LVVS++ KKVKRL P  LPE RDPK+FT+LVENLPEDHS 
Sbjct: 149 MKKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDHSN 208

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA ATL
Sbjct: 209 ENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATL 268

Query: 121 NDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQN 180
           N+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   R     
Sbjct: 269 NNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR----- 328

Query: 181 GDEEIQNVVNEHHDDVPDEEEG 202
              E QN    H D+  D+ +G
Sbjct: 329 ---EHQNHRLHHSDNPADDVKG 340

[Close]
BLAST of PI0020649 vs. TAIR 10
Match: AT5G46250.3 (RNA-binding protein )

HSP 1 Score: 192.6 bits (488), Expect = 4.2e-49
Identity = 109/202 (53.96%), Postives = 142/202 (70.30%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           MKKLT DH+ I +AL+ESS LVVS++ KKVKRL P  LPE RDPK+FT+LVENLPEDHS 
Sbjct: 149 MKKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDHSN 208

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKAV TL
Sbjct: 209 ENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAVTTL 268

Query: 121 NDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQN 180
           N+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   R     
Sbjct: 269 NNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR----- 328

Query: 181 GDEEIQNVVNEHHDDVPDEEEG 202
              E QN    H D+  D+ +G
Sbjct: 329 ---EHQNHRLHHSDNPADDVKG 340

[Close]
BLAST of PI0020649 vs. TAIR 10
Match: AT3G19090.1 (RNA-binding protein )

HSP 1 Score: 138.3 bits (347), Expect = 9.4e-33
Identity = 103/282 (36.52%), Postives = 150/282 (53.19%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           +K LT +H  ++ ALR SS LVVS +GKKVKR    +  +  + +  T++ ENLP+DHS 
Sbjct: 190 IKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSY 249

Query: 61  ENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATL 120
           +N+++IFGV G +++I IC  H  +      KGD L+SNK+HAL+EY+    ++KAV  L
Sbjct: 250 QNLEKIFGVVGNVKAIRIC--HPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKL 309

Query: 121 NDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNG 180
           NDE++WR G+RV+ L   S     K         +N  G + D   P        + ++G
Sbjct: 310 NDERNWRKGLRVRLLLRCSPKSVLKNR-------RNFDGILIDDELP--------SYESG 369

Query: 181 DEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGH-------- 240
           ++  +  + E   D     +GD  +      +GR +GR R  +   V G G         
Sbjct: 370 EDSPRLHLTESQLD----NDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGV 429

Query: 241 --GTTTSTHHIELSKP---PPGPKMPDGTRGFTMGRGRPPTS 270
             G  +   H E S P     GP+MPDGTRGFTMGRG+P  S
Sbjct: 430 SLGIPSLGSH-ESSSPKTATKGPRMPDGTRGFTMGRGKPSIS 449

[Close]
BLAST of PI0020649 vs. TAIR 10
Match: AT2G43970.1 (RNA-binding protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-26
Identity = 100/317 (31.55%), Postives = 153/317 (48.26%), Query Frame = 0 

Query: 1   MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSE 60
           +K + +++S + A L+ S+ L VS +GKKV+R+ PI+     + +   I+ ENLPEDH  
Sbjct: 239 IKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCY 298

Query: 61  ENIKRIFGVAGRIRSITICDPH-----VVDKLGKSSKGD-VLISNKLHALVEYETLEASE 120
           +N+ +IF   G +++I  C P             ++K D  L SNK+HA VEYE +E +E
Sbjct: 299 QNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAE 358

Query: 121 KAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPG 180
           +AV  L++  +WR+G++V+  LKH +K           EP K   GR   + G D ++  
Sbjct: 359 RAVTELSEAGNWRSGLKVRLMLKHQTK-----------EP-KQGQGR--GRKGHDADVEH 418

Query: 181 RVTDQNGDEEIQNVVNEHHDDVPDEEE--------GDHQHKDKHG------HRGRNQGRT 240
              D    E  Q  + +  DD   E +        G+ Q  +K        +RGR +GR 
Sbjct: 419 EEDDATTSE--QQPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRG 478

Query: 241 RRQKYKGV------------NGMGHGTTTSTHHIEL------------------SKPPPG 267
           R Q ++              N  G G     HH ++                   + PPG
Sbjct: 479 RGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPG 538

The following BLAST results are available for this feature:
BLAST of PI0020649 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94A385.0e-7153.74La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1[more]
Q9LHL31.3e-3136.52La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1[more]
O805672.4e-2531.55La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2[more]
Q05CL82.1e-0836.07La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2[more]
Q5XI012.1e-0836.07La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2[more]
BLAST of PI0020649 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CMV43.7e-14697.07La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25... [more]
A0A0A0KI362.4e-14596.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523320 PE=4 SV=1[more]
A0A1S3AYU27.0e-14596.34la-related protein 6A OS=Cucumis melo OX=3656 GN=LOC103484374 PE=4 SV=1[more]
A0A5A7UBI54.3e-14289.23La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold12... [more]
A0A6J1EHU67.1e-12987.13la-related protein 6A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433532 P... [more]
BLAST of PI0020649 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK13277.17.7e-14697.07la-related protein 6A [Cucumis melo var. makuwa][more]
XP_004134576.15.0e-14596.34la-related protein 6A [Cucumis sativus] >KGN49390.1 hypothetical protein Csa_002... [more]
XP_008439642.11.5e-14496.34PREDICTED: la-related protein 6A [Cucumis melo][more]
XP_038882123.18.0e-14395.20la-related protein 6A [Benincasa hispida][more]
KAA0052548.18.8e-14289.23la-related protein 6A [Cucumis melo var. makuwa][more]
BLAST of PI0020649 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G46250.13.5e-7253.74RNA-binding protein [more]
AT5G46250.24.2e-4953.96RNA-binding protein [more]
AT5G46250.34.2e-4953.96RNA-binding protein [more]
AT3G19090.19.4e-3336.52RNA-binding protein [more]
AT2G43970.11.7e-2631.55RNA-binding protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 48..133
e-value: 0.0057
score: 25.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 49..123
e-value: 4.5E-7
score: 29.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 47..133
score: 9.865582
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 39..145
e-value: 5.9E-11
score: 44.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..273
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 1..268
NoneNo IPR availablePANTHERPTHR22792:SF102LA-RELATED PROTEIN 6Acoord: 1..268
IPR006630La-type HTH domainPROSITEPS50961HTH_LAcoord: 1..40
score: 9.690447
IPR034878Plant La-related protein, RNA recognition motifCDDcd12288RRM_La_like_plantcoord: 47..135
e-value: 8.56217E-39
score: 129.174
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 34..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0020649.1PI0020649.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005844 polysome
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding