PI0020608 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGCGACGTTGCGTCCTCCCCTTATCCACTTTTCCCAAAATTCCTCATTCCAATTCAAACCGCTCCATCTTTTCCATTCCTTCTCATTCTTCTCTTCTTCTCCTCTTCTCCTCCATTTCCATCCCGATCTTCTTGTTCTTCAAGATCTTCCCTATTCACCTACTTCATTTTCCCTCAATTTCCCACCAACCCCACTTCTTAATTCTTCCTAACTTTCTTCAATCCCTTCGATTTCGTCAGATTTTTCGTCCATTTTAATGGCTGACGCTCTCAGCAAGGTTGCTTTTCTTGCTCCTTTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTCATCGTCATCTTCATCATCTTTCTATACCTTTTCCCGGCTTTAAATCGGTTGATTCTTCTTCCCATCCCTTTAATTGGCAACGAATTTCTGTGAAATTACCATCCACCTCGGGGCCGTTTTCTAGCAGTCACTCCTATGGCAGAAGAATTGAGTTTACTGAAAGGAATTCTGTTTCTCCTCCACGATCTTCGACGATTTCCCATGTTTGTATTGCTATCTATCTCTAATTTTAATCTCTAACGCCCTTGAATTTTTGTCTGGTGTTAGGGTTTTTGGATTTACTTTGTGACTTTTGTTTGTATTGTTAGCTTCTTTGTGTTTGTTTTATATTTTGATTCTGATTGGGAATCTCAGCTGTCTCTTCATGGTTGTAATTTGGGTTTTTATGAACCGAAATAGTTGCTGTATGCCTTTATATTTCTGTATTTTAATCCTTTTTCTTGTCTGGAATATGTAGTGATAAATTCCGATGTTGATATTTCATTTATGGAAGAATCCCACTTTTGCAATTCGGTTAGCACTTGATTATGTATATTGTTTATTAACCCTTTTGTTTGCTATTCAATAGAGTGGCTTTCGGATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGGCTACAACCTAATATGAAAGAGGTGACCGGTGCACATGATCTTGTGGATTCTCTTTTAAATGCTGGGGATAAGCTTGTTATTGTCGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGGTCTTTCTCATTCTTTAGTGTCTAGAAAAATCTATCTTCTAAGTTTTTCTTAGTCCTGAAGTTTATATATTGTACGCAGTTATGCCAATTTGCTGAGATGTATCCTGATATCCAATTTTTGCAAGTGAACTATGAAGAACACAAATCCATGTGTTATAGTCTTGGTGTCCATGTGCTTCCCTTCTTCCGCTTTTACAGAGGCGCTCAAGGTCGTCTTTGCAGCTTTAGCTGCACTAATGCAACGGTAAGAAATCTTTAAGTATATTGGAAGTTTTCTGCTTTTGTAATGTTATTAGATGATTAGATCATAATATTTGATTTTGGATGTCTCTTCTTTGAGAGAAGCATGCTTTTCCTGATTTTTCCTCACTTCGGTTTGGTCTACTAAATTAGCAGTTGTTTATAGTACAATACTGCATTTCAATAGAGTATGTACTGTGCAGTATTGTTGTCCTTTCATCAATGTTGGCCTGTTAATTATCGGTTCTAATTTTTCATTTAACCACATTTGAAATGATTTATTTGTTATCGAGCTGTTTTGTGGTTTCGTCTAAGCCTCATGAGTATCAGAAATCCTGTTTCTTTTTCTTCTCTGCTAATGCACTTGTTTCTCCATAAACTTATTGATAACAAATGGGTCTAATCTCACAGATTAAGAAATTCAAGGATGCGTTAGCCAAGCACAACACTGATCGATGCAGCCTTGGCCCCACGCAAGGGTTGGAGGAAAAAGATCTCGTGGCACTTGCCGCCAACAAAGAATTGTCTTTCAACTACACACCTAAACCAGCAGAAGAGGTCCCTATCCCCATCCCCATCCCCATCCCCATCCCCGCCACAGTGGGAGGGGTAAGAACTTCGGAATCAGAACGTTCACATTCGGATTTGGAACAACTGCCTATTCCTCTTCCTTCAACTATCCTCAAGTCGTCTGGCCAAGCTCCCAAGGAGAATGCCTATGCGGGATGAAGCCGACCCCGCCCATATCCTATACTTAGTATGAGTGCTTTTGGTTGTAAAGGTTCAGGGGTCCTATATTAACGAGACCCAATGAAATAGTAGGGTTTGTTTCTTCTTTCTTTGTTTCTTTTGGTGGCTTGGATCCCAGCCTGCTGATTCTTTAGAACATCAGCAGTCAGCTGTGTGATCGATTATATATATAGTTGCGTTTTGTACATGGTTGTATAAAGCTTCTCTGCAAGATTATGAGTTAAATATTTCTGTAAGATTGTAACTAGTAAATTGGTGTGAAACCAATGAAAAAACTTGTGTACGTTGATGAATATCATTCTGAAAACCACCGTTGCTAATTA AATGCGACGTTGCGTCCTCCCCTTATCCACTTTTCCCAAAATTCCTCATTCCAATTCAAACCGCTCCATCTTTTCCATTCCTTCTCATTCTTCTCTTCTTCTCCTCTTCTCCTCCATTTCCATCCCGATCTTCTTGTTCTTCAAGATCTTCCCTATTCACCTACTTCATTTTCCCTCAATTTCCCACCAACCCCACTTCTTAATTCTTCCTAACTTTCTTCAATCCCTTCGATTTCGTCAGATTTTTCGTCCATTTTAATGGCTGACGCTCTCAGCAAGGTTGCTTTTCTTGCTCCTTTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTCATCGTCATCTTCATCATCTTTCTATACCTTTTCCCGGCTTTAAATCGGTTGATTCTTCTTCCCATCCCTTTAATTGGCAACGAATTTCTGTGAAATTACCATCCACCTCGGGGCCGTTTTCTAGCAGTCACTCCTATGGCAGAAGAATTGAGTTTACTGAAAGGAATTCTGTTTCTCCTCCACGATCTTCGACGATTTCCCATAGTGGCTTTCGGATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGGCTACAACCTAATATGAAAGAGGTGACCGGTGCACATGATCTTGTGGATTCTCTTTTAAATGCTGGGGATAAGCTTGTTATTGTCGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGTTATGCCAATTTGCTGAGATGTATCCTGATATCCAATTTTTGCAAGTGAACTATGAAGAACACAAATCCATGTGTTATAGTCTTGGTGTCCATGTGCTTCCCTTCTTCCGCTTTTACAGAGGCGCTCAAGGTCGTCTTTGCAGCTTTAGCTGCACTAATGCAACGATTAAGAAATTCAAGGATGCGTTAGCCAAGCACAACACTGATCGATGCAGCCTTGGCCCCACGCAAGGGTTGGAGGAAAAAGATCTCGTGGCACTTGCCGCCAACAAAGAATTGTCTTTCAACTACACACCTAAACCAGCAGAAGAGGTCCCTATCCCCATCCCCATCCCCATCCCCATCCCCGCCACAGTGGGAGGGGTAAGAACTTCGGAATCAGAACGTTCACATTCGGATTTGGAACAACTGCCTATTCCTCTTCCTTCAACTATCCTCAAGTCGTCTGGCCAAGCTCCCAAGGAGAATGCCTATGCGGGATGAAGCCGACCCCGCCCATATCCTATACTTAGTATGAGTGCTTTTGGTTGTAAAGGTTCAGGGGTCCTATATTAACGAGACCCAATGAAATAGTAGGGTTTGTTTCTTCTTTCTTTGTTTCTTTTGGTGGCTTGGATCCCAGCCTGCTGATTCTTTAGAACATCAGCAGTCAGCTGTGTGATCGATTATATATATAGTTGCGTTTTGTACATGGTTGTATAAAGCTTCTCTGCAAGATTATGAGTTAAATATTTCTGTAAGATTGTAACTAGTAAATTGGTGTGAAACCAATGAAAAAACTTGTGTACGTTGATGAATATCATTCTGAAAACCACCGTTGCTAATTA ATGAAAGAGGTGACCGGTGCACATGATCTTGTGGATTCTCTTTTAAATGCTGGGGATAAGCTTGTTATTGTCGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGTTATGCCAATTTGCTGAGATGTATCCTGATATCCAATTTTTGCAAGTGAACTATGAAGAACACAAATCCATGTGTTATAGTCTTGGTGTCCATGTGCTTCCCTTCTTCCGCTTTTACAGAGGCGCTCAAGGTCGTCTTTGCAGCTTTAGCTGCACTAATGCAACGATTAAGAAATTCAAGGATGCGTTAGCCAAGCACAACACTGATCGATGCAGCCTTGGCCCCACGCAAGGGTTGGAGGAAAAAGATCTCGTGGCACTTGCCGCCAACAAAGAATTGTCTTTCAACTACACACCTAAACCAGCAGAAGAGGTCCCTATCCCCATCCCCATCCCCATCCCCATCCCCGCCACAGTGGGAGGGGTAAGAACTTCGGAATCAGAACGTTCACATTCGGATTTGGAACAACTGCCTATTCCTCTTCCTTCAACTATCCTCAAGTCGTCTGGCCAAGCTCCCAAGGAGAATGCCTATGCGGGATGA MKEVTGAHDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKLCQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPAEEVPIPIPIPIPIPATVGGVRTSESERSHSDLEQLPIPLPSTILKSSGQAPKENAYAG Homology
BLAST of PI0020608 vs. ExPASy Swiss-Prot
Match: O64654 (Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570 PE=2 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 5.6e-72 Identity = 126/162 (77.78%), Postives = 143/162 (88.27%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 4.2e-67 Identity = 120/146 (82.19%), Postives = 129/146 (88.36%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy Swiss-Prot
Match: Q6Z4N3 (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0684100 PE=2 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.2e-61 Identity = 115/179 (64.25%), Postives = 134/179 (74.86%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.4e-59 Identity = 100/139 (71.94%), Postives = 121/139 (87.05%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy Swiss-Prot
Match: Q9XFI1 (Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440 PE=2 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.1e-50 Identity = 88/136 (64.71%), Postives = 112/136 (82.35%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy TrEMBL
Match: A0A0A0LD91 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G844860 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 7.5e-104 Identity = 186/200 (93.00%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy TrEMBL
Match: A0A1S4E558 (thioredoxin-like 1-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502978 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 7.8e-101 Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy TrEMBL
Match: A0A5A7U7I3 (Thioredoxin-like 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00160 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 7.8e-101 Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy TrEMBL
Match: A0A6J1EYA1 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439903 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 5.1e-92 Identity = 169/200 (84.50%), Postives = 179/200 (89.50%), Query Frame = 0
BLAST of PI0020608 vs. ExPASy TrEMBL
Match: A0A6J1ICM9 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471322 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 8.6e-92 Identity = 169/200 (84.50%), Postives = 179/200 (89.50%), Query Frame = 0
BLAST of PI0020608 vs. NCBI nr
Match: XP_031738085.1 (thioredoxin-like 1-1, chloroplastic isoform X3 [Cucumis sativus]) HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103 Identity = 186/200 (93.00%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of PI0020608 vs. NCBI nr
Match: XP_004141145.1 (thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis sativus] >KGN59768.1 hypothetical protein Csa_002050 [Cucumis sativus]) HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103 Identity = 186/200 (93.00%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of PI0020608 vs. NCBI nr
Match: XP_016903368.1 (PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis melo] >XP_016903369.1 PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis melo]) HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100 Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 0
BLAST of PI0020608 vs. NCBI nr
Match: KAA0051274.1 (thioredoxin-like 1-1 [Cucumis melo var. makuwa] >TYK29986.1 thioredoxin-like 1-1 [Cucumis melo var. makuwa]) HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100 Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 0
BLAST of PI0020608 vs. NCBI nr
Match: XP_038906024.1 (thioredoxin-like 1-1, chloroplastic [Benincasa hispida]) HSP 1 Score: 369.8 bits (948), Expect = 1.5e-98 Identity = 182/200 (91.00%), Postives = 186/200 (93.00%), Query Frame = 0
BLAST of PI0020608 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 ) HSP 1 Score: 271.9 bits (694), Expect = 4.0e-73 Identity = 126/162 (77.78%), Postives = 143/162 (88.27%), Query Frame = 0
BLAST of PI0020608 vs. TAIR 10
Match: AT1G08570.2 (atypical CYS HIS rich thioredoxin 4 ) HSP 1 Score: 271.9 bits (694), Expect = 4.0e-73 Identity = 126/162 (77.78%), Postives = 143/162 (88.27%), Query Frame = 0
BLAST of PI0020608 vs. TAIR 10
Match: AT1G08570.3 (atypical CYS HIS rich thioredoxin 4 ) HSP 1 Score: 271.9 bits (694), Expect = 4.0e-73 Identity = 126/162 (77.78%), Postives = 143/162 (88.27%), Query Frame = 0
BLAST of PI0020608 vs. TAIR 10
Match: AT1G08570.4 (atypical CYS HIS rich thioredoxin 4 ) HSP 1 Score: 271.9 bits (694), Expect = 4.0e-73 Identity = 126/162 (77.78%), Postives = 143/162 (88.27%), Query Frame = 0
BLAST of PI0020608 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 ) HSP 1 Score: 228.8 bits (582), Expect = 3.9e-60 Identity = 100/139 (71.94%), Postives = 121/139 (87.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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