PI0020496 (gene) Melon (PI 482460) v1

Overview


Name	PI0020496
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Serine/arginine repetitive matrix protein 2, putative isoform 2
Location	chr04: 16201268 .. 16204047 (+)
RNA-Seq Expression	PI0020496
Synteny	PI0020496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACCGATCCTTGTAGGATAAAATTAAATTGAATTAGCAATTCCCAATTCTAATCCTCACCCACAGTTCTTCTGGCTCTCTATCAGCTTCTCCATTTTTCCATTTATCTCCGAATTCCTTATGTCTCTCTCTTCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCGTCCTCACATCTTCCGCCGTACTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCTCTGAATCTCCTTCCTCCTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGTATACTCGTTCGCCGATCTGCTCCGGATTGGCTCCCCTTCGTTCCCGGCGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCTAACGTTCTTCGTAACTTGGCTAACCCTCTTTCTCCTGAACAATCCTTGTCTACCACTACTGTTCGTGGCTGGCCCTCTTCTCATTACTTTATTCACGGTATTCCTCTTCTTTCGTATTTCGTGTTCATTTTATCTCTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATTATTTATTTAGGAAAAAAATACCCTTTCATCATAGGTCCGCATCTTCCTTCTCTTGATCCGGAGGTTGACCCCACGTCGACTGAATTCGATGCTTCCCTTGACCACGAGGAAGGATGAGAACCCGATCTGGGTGTGTTCCTATTAGTTCTCATACTAAACTAGTTTCTGCCGTTACAATGAAGTCTGAATTATATTTTCTTTTGCCCTGCAAGTTATTTAGATTTGTATATTGATAGACTTTTAATCAAAGAATTAGCTTGATAGCTCCTTTATTGTGGTTAATTTCTACAAATTAACACTCTTCAGATTGTCAAGTTCTCTACTTTCCTCTATGCTCACTTCATATTGTAACGAGAAGCACGTTTATAATCCCGAATAGTGATAGCACATTGTATACTCCTATGATCGATTCCTAATTAAAGATTCAGAGATTACTATATTTTTTTGGAGTGATTTTCAAAGTTGAAGTTTACACCAGTTTATAGCAGAGGACGATAAGTTTTCAACTTTTGACTTTGGTTTGCAGCTTGCTTGGTGTTGTTTGAAATCTTGTGTAATTTTTGGAAGATCATTCCTTTTTAGCTTTGTTGGGTTCATCTACTCGGCTCGTGGCTGTTACCTTTCTCTTTTGATATTGTAACCTTGTTTCTTAAAAACAAAAAACTGTAGTTTTTGGGCATCTATTGTAATGAGCATTCTTTATGTTGGAAGAATAAGGGGGAAAAAATTAGAAATGCCATGAACTGGTAGTGTTCTCAAGTGGGCGAGTTAAGGATATTTTCTCTTTTTCTGGCTGTTGGAACTTATTTATGTATGATATTTTAGTGTCATTAACGGAATTAGTTTTGCATTCTACTATGCGGTTGGAAATTAATAGAGTTCTGGAAGGATTTCAAACTGAGGTATGCATCCTTGAACTGTGCAAAGCTTGCATCAGTCATGATTATGAATGCAAATTGCCATTGATCTGTAGGTCATCCCATGAATTTGATTAGAAGTGAGTTAGGATGGATTTTAATCTTTCGAGTTATCATTTATAGATCATTTGAGAACTAAATAACATTTTGTTGTAAAAAATACAAGATCCTAGAGATAATGAAAGTAATACAAATGATGGCATTTTCTTCTACTACTATTTTTTGCAGTTCGCCCTGCCTTGTAAACCAATATAGAAGAAGACAACCGAATAACAGACGAGCAAAGATGCCGAGCAAGGAGTAGGAGCTTGTACAGATGTGAACTGGTTGGCGAGTGTTATTTATCGAATGGCCCTTCGTCCATCATTTCGAAGTTTCTGCTCTTGAACGCTTTTTTAAATGTTTTTCCTTTAGAGTAATTTCTTTCTTTCAACTTTCAGCATATGTATTGTGTTCTCTTGTATTTTAAATGTTTATTTCTTTCAATTTTAAGCATTACAAAATATGATTCTCCTCCCTCCGACCCCATGCCTCATGGGCGGGGGACTATTCTGGTTTGAGAAGCTGTTGACTTGTAGTTTCAGATTAGGACACTAAACCACATATGTTGCAGTTCATGCAAGTTAGCTTATTTAGATCCAAATATATTAATTCTGCTCGACTAGTCCGTTTTGGATGGCCCATGATATCTTCATCTGTATTGGCAAGAGGCAACGCAAATTAAAGTTCTATCTGTGATCTAAACCGCCTCTTGATTATTCTTTTTTGCAAGCAAGTATCGAGGTGACAGCTTAGAATGGAAGAAAAGTTTGAAGATTTGCATATTATAATTTGGAAGAAATGCAACTATTTGTATGTGAATGAAGCGAAGGTAAAGTCTTGTAAAGACTGTTCCTGTTTCAAATAGGATTGTTTGTGAAAAGGAATGGGGAGAATCTTGTGAGTATAGACGAGGAAGGTGCAACTGGGGGGAACTTTTCCTTTTTTGACCTTTGGTAAAATGTGTGTTGGAGGATTCTTCTTGGGGTATGTTGTCCTATAGCTTAGATGTTGCGTTTTTTTTTTTCGTGCAAAGAGGAATGTTATTTATGCTTCTCGACAGGGAAAGACATGTTGAGGGCTGTTATGAGAAAGATGGAGCGACTAGATAAATGACCATACAATTAGCTGTTTTGTAAAACAAGTTAAACCTTCATTTTTCAAAATGGCTAAATTCTAATTTTAAACATAGTTATGAAGGATCTTTTTGGTAATTAGTTTGTTTTCTGTTTTTTTCTGT

mRNA sequence

AGAACCGATCCTTGTAGGATAAAATTAAATTGAATTAGCAATTCCCAATTCTAATCCTCACCCACAGTTCTTCTGGCTCTCTATCAGCTTCTCCATTTTTCCATTTATCTCCGAATTCCTTATGTCTCTCTCTTCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCGTCCTCACATCTTCCGCCGTACTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCTCTGAATCTCCTTCCTCCTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGTATACTCGTTCGCCGATCTGCTCCGGATTGGCTCCCCTTCGTTCCCGGCGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCTAACGTTCTTCGTAACTTGGCTAACCCTCTTTCTCCTGAACAATCCTTGTCTACCACTACTGTTCGTGGCTGGCCCTCTTCTCATTACTTTATTCACGGTCCGCATCTTCCTTCTCTTGATCCGGAGGTTGACCCCACGTCGACTGAATTCGATGCTTCCCTTGACCACGAGGAAGGATGAGAACCCGATCTGGGTGTGTTCCTATTAGTTCTCATACTAAACTAGTTTCTGCCGTTACAATGAAGTCTGAATTATATTTTCTTTTGCCCTGCAAGTTATTTAGATTTGTATATTGATAGACTTTTAATCAAAGAATTAGCTTGATAGCTCCTTTATTGTGGTTAATTTCTACAAATTAACACTCTTCAGATTGTCAAGTTCTCTACTTTCCTCTATGCTCACTTCATATTGTAACGAGAAGCACGTTTATAATCCCGAATAGTGATAGCACATTGTATACTCCTATGATCGATTCCTAATTAAAGATTCAGAGATTACTATATTTTTTTGGAGTGATTTTCAAAGTTGAAGTTTACACCAGTTTATAGCAGAGGACGATAAGTTTTCAACTTTTGACTTTGGTTTGCAGCTTGCTTGGTGTTGTTTGAAATCTTGTGTAATTTTTGGAAGATCATTCCTTTTTAGCTTTGTTGGGTTCATCTACTCGGCTCGTGGCTGTTACCTTTCTCTTTTGATATTGTAACCTTGTTTCTTAAAAACAAAAAACTGTAGTTTTTGGGCATCTATTGTAATGAGCATTCTTTATGTTGGAAGAATAAGGGGGAAAAAATTAGAAATGCCATGAACTGGTAGTGTTCTCAAGTGGGCGAGTTAAGGATATTTTCTCTTTTTCTGGCTGTTGGAACTTATTTATGTATGATATTTTAGTGTCATTAACGGAATTAGTTTTGCATTCTACTATGCGGTTGGAAATTAATAGAGTTCTGGAAGGATTTCAAACTGAGGTATGCATCCTTGAACTGTGCAAAGCTTGCATCAGTCATGATTATGAATGCAAATTGCCATTGATCTGTAGGTCATCCCATGAATTTGATTAGAAGTGAGTTAGGATGGATTTTAATCTTTCGAGTTATCATTTATAGATCATTTGAGAACTAAATAACATTTTGTTGTAAAAAATACAAGATCCTAGAGATAATGAAAGTAATACAAATGATGGCATTTTCTTCTACTACTATTTTTTGCAGTTCGCCCTGCCTTGTAAACCAATATAGAAGAAGACAACCGAATAACAGACGAGCAAAGATGCCGAGCAAGGAGTAGGAGCTTGTACAGATGTGAACTGGTTGGCGAGTGTTATTTATCGAATGGCCCTTCGTCCATCATTTCGAAGTTTCTGCTCTTGAACGCTTTTTTAAATGTTTTTCCTTTAGAGTAATTTCTTTCTTTCAACTTTCAGCATATGTATTGTGTTCTCTTGTATTTTAAATGTTTATTTCTTTCAATTTTAAGCATTACAAAATATGATTCTCCTCCCTCCGACCCCATGCCTCATGGGCGGGGGACTATTCTGGTTTGAGAAGCTGTTGACTTGTAGTTTCAGATTAGGACACTAAACCACATATGTTGCAGTTCATGCAAGTTAGCTTATTTAGATCCAAATATATTAATTCTGCTCGACTAGTCCGTTTTGGATGGCCCATGATATCTTCATCTGTATTGGCAAGAGGCAACGCAAATTAAAGTTCTATCTGTGATCTAAACCGCCTCTTGATTATTCTTTTTTGCAAGCAAGTATCGAGGTGACAGCTTAGAATGGAAGAAAAGTTTGAAGATTTGCATATTATAATTTGGAAGAAATGCAACTATTTGTATGTGAATGAAGCGAAGGTAAAGTCTTGTAAAGACTGTTCCTGTTTCAAATAGGATTGTTTGTGAAAAGGAATGGGGAGAATCTTGTGAGTATAGACGAGGAAGGTGCAACTGGGGGGAACTTTTCCTTTTTTGACCTTTGGTAAAATGTGTGTTGGAGGATTCTTCTTGGGGTATGTTGTCCTATAGCTTAGATGTTGCGTTTTTTTTTTTCGTGCAAAGAGGAATGTTATTTATGCTTCTCGACAGGGAAAGACATGTTGAGGGCTGTTATGAGAAAGATGGAGCGACTAGATAAATGACCATACAATTAGCTGTTTTGTAAAACAAGTTAAACCTTCATTTTTCAAAATGGCTAAATTCTAATTTTAAACATAGTTATGAAGGATCTTTTTGGTAATTAGTTTGTTTTCTGTTTTTTTCTGT

Coding sequence (CDS)

ATGTCTCTCTCTTCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCGTCCTCACATCTTCCGCCGTACTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCTCTGAATCTCCTTCCTCCTCCGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGTATACTCGTTCGCCGATCTGCTCCGGATTGGCTCCCCTTCGTTCCCGGCGCTTCCTATTGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCCCATTGCTAACGTTCTTCGTAACTTGGCTAACCCTCTTTCTCCTGAACAATCCTTGTCTACCACTACTGTTCGTGGCTGGCCCTCTTCTCATTACTTTATTCACGGTCCGCATCTTCCTTCTCTTGATCCGGAGGTTGACCCCACGTCGACTGAATTCGATGCTTCCCTTGACCACGAGGAAGGATGA

Protein sequence

MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLDPEVDPTSTEFDASLDHEEG

Homology

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BLAST of PI0020496 vs. ExPASy TrEMBL
Match: A0A0A0K9L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 143/151 (94.70%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MSLS+LSKPKSLTLTLNLLRPH+FRR FSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120

Query: 121 YFIHGPHLPSLDPEVDPTSTEFDASLDHEEG 152
           YFI G HLPSLDPEVD TSTE DASLDHEEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDHEEG 151

[Close]

BLAST of PI0020496 vs. ExPASy TrEMBL
Match: A0A1S3CC43 (uncharacterized protein LOC103499150 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.4e-72
Identity = 141/151 (93.38%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MS SSLSKPKSL LTLNLLRPHIFRRTFSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIHGPHLPSLDPEVDPTSTEFDASLDHEEG 152
           YFI G HLPSLDPEVD TSTE DASLD EEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151

[Close]

BLAST of PI0020496 vs. ExPASy TrEMBL
Match: A0A5A7VD84 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00450 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.4e-72
Identity = 141/151 (93.38%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MS SSLSKPKSL LTLNLLRPHIFRRTFSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIHGPHLPSLDPEVDPTSTEFDASLDHEEG 152
           YFI G HLPSLDPEVD TSTE DASLD EEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151

[Close]

BLAST of PI0020496 vs. ExPASy TrEMBL
Match: A0A1S3CC81 (uncharacterized protein LOC103499150 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 119/125 (95.20%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MS SSLSKPKSL LTLNLLRPHIFRRTFSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIHG 126
           YFI G
Sbjct: 121 YFIQG 125

[Close]

BLAST of PI0020496 vs. ExPASy TrEMBL
Match: A0A1S3CBN8 (uncharacterized protein LOC103499150 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.6e-59
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MS SSLSKPKSL LTLNLLRPHIFRRTFSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFI 124
           YFI
Sbjct: 121 YFI 123

[Close]

BLAST of PI0020496 vs. NCBI nr
Match: XP_004135962.1 (uncharacterized protein LOC101214133 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 2.6e-74
Identity = 143/151 (94.70%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MSLS+LSKPKSLTLTLNLLRPH+FRR FSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120

Query: 121 YFIHGPHLPSLDPEVDPTSTEFDASLDHEEG 152
           YFI G HLPSLDPEVD TSTE DASLDHEEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDHEEG 151

[Close]

BLAST of PI0020496 vs. NCBI nr
Match: KAE8646378.1 (hypothetical protein Csa_015587 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 2.6e-74
Identity = 143/151 (94.70%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MSLS+LSKPKSLTLTLNLLRPH+FRR FSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120

Query: 121 YFIHGPHLPSLDPEVDPTSTEFDASLDHEEG 152
           YFI G HLPSLDPEVD TSTE DASLDHEEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDHEEG 151

[Close]

BLAST of PI0020496 vs. NCBI nr
Match: XP_008460271.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_008460272.1 PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_008460273.1 PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >KAA0065598.1 uncharacterized protein E6C27_scaffold90G00420 [Cucumis melo var. makuwa] >TYK07168.1 uncharacterized protein E5676_scaffold606G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 280.4 bits (716), Expect = 9.1e-72
Identity = 141/151 (93.38%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MS SSLSKPKSL LTLNLLRPHIFRRTFSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIHGPHLPSLDPEVDPTSTEFDASLDHEEG 152
           YFI G HLPSLDPEVD TSTE DASLD EEG
Sbjct: 121 YFIQGTHLPSLDPEVDTTSTECDASLDREEG 151

[Close]

BLAST of PI0020496 vs. NCBI nr
Match: XP_008460275.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X3 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 2.3e-59
Identity = 119/125 (95.20%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MS SSLSKPKSL LTLNLLRPHIFRRTFSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFIHG 126
           YFI G
Sbjct: 121 YFIQG 125

[Close]

BLAST of PI0020496 vs. NCBI nr
Match: XP_008460274.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X2 [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-58
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MSLSSLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSESPSSSDPLLRNLEDAIQRI 60
           MS SSLSKPKSL LTLNLLRPHIFRRTFSSPSDHDLTDL ESPSSSDPLLRNLEDAIQRI
Sbjct: 1   MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWPSSH 120
           LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIA+VLRNLANPLS EQSLSTTTVRGWPSSH
Sbjct: 61  LVRRSAPDWLPFVPGASYWVPLPSNSHLPPIASVLRNLANPLSHEQSLSTTTVRGWPSSH 120

Query: 121 YFI 124
           YFI
Sbjct: 121 YFI 123

[Close]

BLAST of PI0020496 vs. TAIR 10
Match: AT1G16840.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 71/152 (46.71%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 5   SLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSE------SPSSSDPLLRNLEDAIQ 64
           SLSK +    + +LL P     +F S S     DL E      S S SDPL++ LEDA+ 
Sbjct: 10  SLSKGRFAAASSSLL-PSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLEDAVH 69

Query: 65  RILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWP 124
           RI VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+ E+SLST +  GWP
Sbjct: 70  RIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSSHGWP 129

Query: 125 SSHYFIHGPHLPSLDPEVDPTSTEFDASLDHE 150
           SS YF+ G     ++ + + TS     S D E
Sbjct: 130 SSDYFLKGVQPQLMETKTETTSNSESHSEDEE 160

[Close]

BLAST of PI0020496 vs. TAIR 10
Match: AT1G16840.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 71/152 (46.71%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 5   SLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSE------SPSSSDPLLRNLEDAIQ 64
           SLSK +    + +LL P     +F S S     DL E      S S SDPL++ LEDA+ 
Sbjct: 10  SLSKGRFAAASSSLL-PSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLEDAVH 69

Query: 65  RILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWP 124
           RI VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+ E+SLST +  GWP
Sbjct: 70  RIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSSHGWP 129

Query: 125 SSHYFIHGPHLPSLDPEVDPTSTEFDASLDHE 150
           SS YF+ G     ++ + + TS     S D E
Sbjct: 130 SSDYFLKGVQPQLMETKTETTSNSESHSEDEE 160

[Close]

BLAST of PI0020496 vs. TAIR 10
Match: AT1G16840.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 71/152 (46.71%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 5   SLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSE------SPSSSDPLLRNLEDAIQ 64
           SLSK +    + +LL P     +F S S     DL E      S S SDPL++ LEDA+ 
Sbjct: 10  SLSKGRFAAASSSLL-PSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLEDAVH 69

Query: 65  RILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWP 124
           RI VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+ E+SLST +  GWP
Sbjct: 70  RIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSSHGWP 129

Query: 125 SSHYFIHGPHLPSLDPEVDPTSTEFDASLDHE 150
           SS YF+ G     ++ + + TS     S D E
Sbjct: 130 SSDYFLKGVQPQLMETKTETTSNSESHSEDEE 160

[Close]

BLAST of PI0020496 vs. TAIR 10
Match: AT1G78890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 67/138 (48.55%), Postives = 89/138 (64.49%), Query Frame = 0


Query: 5   SLSKPKSLTLTLNLLRPH---IFRRTFSS---PSDHDLTDLSESPSSSDPLLRNLEDAIQ 64
           SLS  +      +LL P    IF R+ SS    + + L  + E   ++DPL+  LEDA+ 
Sbjct: 8   SLSLSRYRFAAASLLLPSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAADPLVNKLEDAVH 67

Query: 65  RILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWP 124
           RI+VRRSAPDWLPFVPGAS+WVP P S SH   IA ++  LANP+S E+S+S ++VRGWP
Sbjct: 68  RIMVRRSAPDWLPFVPGASFWVPPPRSQSH--GIAKLVEKLANPISDEESISISSVRGWP 127

Query: 125 SSHYFIHGPHLPSLDPEV 136
            S YFI G    S++ E+
Sbjct: 128 CSDYFIKGVKPQSVETEM 143

[Close]

BLAST of PI0020496 vs. TAIR 10
Match: AT1G16840.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 66/130 (50.77%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 5   SLSKPKSLTLTLNLLRPHIFRRTFSSPSDHDLTDLSE------SPSSSDPLLRNLEDAIQ 64
           SLSK +    + +LL P     +F S S     DL E      S S SDPL++ LEDA+ 
Sbjct: 10  SLSKGRFAAASSSLL-PSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLEDAVH 69

Query: 65  RILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIANVLRNLANPLSPEQSLSTTTVRGWP 124
           RI VRR+ PDWLPFVPGASYWVP P S S    IA ++  LANPL+ E+SLST +  GWP
Sbjct: 70  RIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSSHGWP 129

Query: 125 SSHYFIHGPH 128
           SS YF+ G +
Sbjct: 130 SSDYFLKGSY 138

The following BLAST results are available for this feature:

BLAST of PI0020496 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9L9	1.2e-74	94.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1	[more]
A0A1S3CC43	4.4e-72	93.38	uncharacterized protein LOC103499150 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7VD84	4.4e-72	93.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CC81	1.1e-59	95.20	uncharacterized protein LOC103499150 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CBN8	5.6e-59	95.93	uncharacterized protein LOC103499150 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of PI0020496 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135962.1	2.6e-74	94.70	uncharacterized protein LOC101214133 [Cucumis sativus]	[more]
KAE8646378.1	2.6e-74	94.70	hypothetical protein Csa_015587 [Cucumis sativus]	[more]
XP_008460271.1	9.1e-72	93.38	PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_008460275.1	2.3e-59	95.20	PREDICTED: uncharacterized protein LOC103499150 isoform X3 [Cucumis melo]	[more]
XP_008460274.1	1.2e-58	95.93	PREDICTED: uncharacterized protein LOC103499150 isoform X2 [Cucumis melo]	[more]

BLAST of PI0020496 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16840.4	1.0e-25	46.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.3	1.0e-25	46.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.1	1.0e-25	46.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G78890.1	1.2e-24	48.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.2	2.0e-24	50.77	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..151
None	No IPR available	PANTHER	PTHR33972:SF16	REPETITIVE MATRIX PROTEIN 2, PUTATIVE ISOFORM 1-RELATED	coord: 22..147
None	No IPR available	PANTHER	PTHR33972	EXPRESSED PROTEIN	coord: 22..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020496.1	PI0020496.1	mRNA