![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
PI0020484 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAACAAGAGGCGAATGTGAGAGAGGTTGTCCCCAGTAAAGGTGATGAGCTGGCTATTGTGACTTGTGGAGATGTTGTGTTGGAGTCCTTAGCAATTAGAGGAAGGTGAAGCAAAGGGATCCCCGATTAGGCAGGTATCGCACGTTCAACGTGATGTGGGTAAACAAGATGATTTCACCCTTGTGACTCGTAAGAAGGAGTTGGTTTCAGTGAGCGATCGTGGGAAAGGGAAAAGTTTGGAGACTCTGCAGAACTCTTTTGGCATTTTACTGATTTGAGGGAGGGAGATAACTAGGCTTTGGCCCTGCATGATGGTTCCCTTCCACCATTAAAGGTTGTTGGTAGTGATATTGTTATGACTATTTTGAGTCCGGATGGAGGTCCTATGGGTCACTTGTTAATGATAGTTCCCAGATTAGTTGGTGTTCGTAGAATGTGCGGAGTCTTAATGACCTAGTGAAGTGCACGATGGTGATTGATTTTCTGAGTGTGTCCTCTATAGGTTTTTGTTGTCTTTTGGAGACGAGAGTTCACGAGGGTAATTTTTGTTATGTTTCTGTCCGGTTTGGTGATGTATAGGGTTACTCTTGTAGCTATAGTAGTAGTGGTGTTGGTCGTATTTGGGTGATGTGGAAACAGGGTAGATTCGATTTTACTCCTGGTGTGGTGGATGAGCAGTTTGTTTCTGGTGTGCTAACTGATTTGCATTCTGGGGTTACTGTGGAGGTGTTTTGTGTTTATGCCTCTAACAGTAATGTGGATAGATGTTTGCTTTGGTGTCGATTAGTTGAGATCACTTCTAGTTGGTCGGTTTTGGGTGTTGTTATGGATGATTTTGATGCTATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTAGTTTTTGGTGATATGGAGGAGTTTGATCTTGCGGTTCGTGAGGCTGAGTTAGTTGAGCCTTCGGTCCAAGGTAACTGGTTCACTTGGACGAGTAAGGTGTGTAGACACAGTATTTTGTCCTTATTTATTCTTTTATTTATTTTTATTTTATTTTATTTTATTTTATTTATTTATTGATTTATCTATCTATTTATTTATTTACCTTTATTTACCTTTATTTTATTTTATTTTATTAATTTAATTTAATTTAATTTAATTTTGTTTTTTTAAAATAAGGAAACAAAATAG ATGCAACAAGAGGCGAATGTGAGAGAGGTTGTCCCCAGTAAAGGTGATGAGCTGGCTATTGTGACTTGTGGAGATGTTGTGTTGGAGTCCTTAGCAATTAGAGGAAGCTATAGTAGTAGTGGTGTTGGTCGTATTTGGGTGATGTGGAAACAGGGTAGATTCGATTTTACTCCTGGTGTGGTGGATGAGCAGTTTGTTTCTGGTGTGCTAACTGATTTGCATTCTGGGGTTACTGTGGAGGTGTTTTGTGTTTATGCCTCTAACAGTAATGTGGATAGATGTTTGCTTTGGTGTCGATTAGTTGAGATCACTTCTAGTTGGTCGGTTTTGGGTGTTGTTATGGATGATTTTGATGCTATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTAGTTTTTGGTGATATGGAGGAGTTTGATCTTGCGGTTCGTGAGGCTGAGTTAGTTGAGCCTTCGGTCCAAGGTAACTGGTTCACTTGGACGAGTAAGGAAACAAAATAG ATGCAACAAGAGGCGAATGTGAGAGAGGTTGTCCCCAGTAAAGGTGATGAGCTGGCTATTGTGACTTGTGGAGATGTTGTGTTGGAGTCCTTAGCAATTAGAGGAAGCTATAGTAGTAGTGGTGTTGGTCGTATTTGGGTGATGTGGAAACAGGGTAGATTCGATTTTACTCCTGGTGTGGTGGATGAGCAGTTTGTTTCTGGTGTGCTAACTGATTTGCATTCTGGGGTTACTGTGGAGGTGTTTTGTGTTTATGCCTCTAACAGTAATGTGGATAGATGTTTGCTTTGGTGTCGATTAGTTGAGATCACTTCTAGTTGGTCGGTTTTGGGTGTTGTTATGGATGATTTTGATGCTATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTAGTTTTTGGTGATATGGAGGAGTTTGATCTTGCGGTTCGTGAGGCTGAGTTAGTTGAGCCTTCGGTCCAAGGTAACTGGTTCACTTGGACGAGTAAGGAAACAAAATAG MQQEANVREVVPSKGDELAIVTCGDVVLESLAIRGSYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGDMEEFDLAVREAELVEPSVQGNWFTWTSKETK Homology
BLAST of PI0020484 vs. ExPASy TrEMBL
Match: A0A5A7U3C2 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00410 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 8.9e-50 Identity = 97/128 (75.78%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of PI0020484 vs. ExPASy TrEMBL
Match: A0A5A7SPE5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00620 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 7.5e-49 Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of PI0020484 vs. ExPASy TrEMBL
Match: A0A5D3DXE4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00020 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 7.5e-49 Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of PI0020484 vs. ExPASy TrEMBL
Match: A0A5A7V275 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00430 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 3.7e-48 Identity = 95/127 (74.80%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of PI0020484 vs. ExPASy TrEMBL
Match: A0A5D3DXQ8 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001370 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 3.7e-48 Identity = 95/131 (72.52%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of PI0020484 vs. NCBI nr
Match: KAA0049770.1 (hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa] >TYK12107.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49 Identity = 97/128 (75.78%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of PI0020484 vs. NCBI nr
Match: TYK28099.1 (uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48 Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of PI0020484 vs. NCBI nr
Match: KAA0026071.1 (uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]) HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48 Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of PI0020484 vs. NCBI nr
Match: XP_008466769.1 (PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]) HSP 1 Score: 201.1 bits (510), Expect = 7.7e-48 Identity = 95/127 (74.80%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of PI0020484 vs. NCBI nr
Match: KAA0059841.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK24796.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 201.1 bits (510), Expect = 7.7e-48 Identity = 95/127 (74.80%), Postives = 110/127 (86.61%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|