PI0020465 (gene) Melon (PI 482460) v1

Overview


Name	PI0020465
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gag/pol protein
Location	chr07: 13748411 .. 13751075 (-)
RNA-Seq Expression	PI0020465
Synteny	PI0020465

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGATCTTCAAGTCACCAAGATCAAACTAGAGTGCGTTCTGATGGCCCTAAATCAGAACGCCCCACATCACGGGGAAGTGGCGAACAAAGAACGCCACAATACACCTACTTGAAACACGGTAAGGGGAAGGTGTTACTGAAACCCCCGCCGGAAGCGTCTGACAATTTTTTGGAGGTAGAGGTTGATAACCAGGATACAGAGGCGGTGCTCAAATTTCTTAACGAACGAGCAAAGAAGAGGAAAGACGCTCACATCAAAAGAACCAAAGAAGGTCGTCACCGAAAGGACGAGCGTGAGCGAACAAGACTTGATGCAATTCGAAAGGCGAAGAACACATTAGAAATACGCTCACCGCTTAACGAAGTTGTAGAGCTTCACAAGAAGATCTCTGACAAGCTTGCACAAGTCTCGTTCGCCAAAACGAGGAAAACAATTGAGGAAGTTAAGGCGGCCTTAAAAAGGAAAGAAGAGAAGAAAAAGATGTTCGCAGAACTGAGCGAGCAAGTGGCAGAGCTCCCCGCGAAAGCAAGAGCATTGGAGCCAGAGAAAAACCTCAAAGCAATCGCAGAAGAATTCGAGGATGAGCTGGAGGCGAAGAGTCCACTTGATGACAGGCCACCGCCAAGAAAACCAAGGGAGGTCGCAGGACCAAGAGGAAGGAAGAAAGCTGGGCGTTCTGGACCTGAAGAGCGCTCATCAGGCGGCGACACCATAAGCAAAACACCCTCTATCAACTCTCTCATCAAAGTTGAGAAAGGACTGTTTCCGTTCAATGGTCAACTCCCAGACTTTCTCTACGCGCCAATTCAGGCGTTCGGATGGAAGTCATTTTTCAAAGGGCACACCAAAATAAGATTAGGAGTGGTGGAAAAGTTTTACACGGCTAAGCTCAACGCTGCAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAACGCGGAGGCCATCAACGCGTTGTATGATTTGCCCAATGACGTTGAAACCCTAGGGCAAATATACATAGACAGTCCTACGAAGAGGATGGCCCGTGAAGCGCTGGAAGTCATCGCATGGCCTGGGGCCACATGGGAAGTAACGCCAACATGGAAGTATCAGTTGTATCCACACCAGCTAACCACTGAAGCAAGCGTGTGGTTGTTCTTTATCAAGAAGAAGATCTTTCCAACGCGCCATGATAACACCATCAATTTAGAGTCAGCGATGCTACTCTATTGTATCCTGGCGAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTATCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCCTTAAAGTTGTGCCATTCTTATCCGCCATCCAAACCATCTCAATACAAGGCGGGCTGTGTAATCAAGTGGCCTTGAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTAGGCGACACACCTGAAGGAATGGCCCAAGCAGAAAGAAAAAGGAAATCCCCAGTCGTTGCATCAACCCCCCCACCTAAAGCCAAAAAAAACAAAGGTTCTTGCGACGAAGCAGCCTCCACTGAAATTTCTCCACTCCTCATCTCGCCCAATACAGCAAGCTCCCCCATCAGTCCAAAATTTCAGCAGCTCCAACCTTCCCCGCTCTTCTTCGCCCATTCCAATCACCCCACCATCACCAAACATCTCTCCCCGTCATTCACCTCTCCCCCACATTCATTCCCCTCTCAACATCCCTCACCTTTCCCCACGACCGCCTACCCCTTCGCCCACAAAATCTACTTCTCCTCTTCCTTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTGTTATTCTTTCGCCCATCATGGACCTGACCACTCTTCGCCATGACCAACCCGCGGCCAACATTGAGGTCATTGAGGTTTCTTCACCCATCACCCACCCGGCAAATCGTCCTTTGCGAACTTCTCCCATTCTTCTAATCTCAGAAGAGAACGCTCCTCCCACCAACCAATTGTCCCAACCATCACCACCGCCACCTATTATGGCTACCGCGGAAAATGTTGATGACCCACACGTTAAGGACAAAAACCCTATCCTTAATGAAGTTGGCGAGAGCGCTTCCTCTGCGCATACTCCCATCGCCCAACCTTCCACCACACTTCGAGACGATGAAGATTTTGGCGAAATATTGGGTTCCCTTGTGTGTAAGCCAATGATGGAACAGTTCGAACAAATTTTGGCTAACCAAGGGGACCAGGCGGTGCAACTCCATAATTTGCAAATTTGAGTTGACCAGTTGCAGCGTCCCAACGCCGAAAACCTTGTAACGCCCGCATCTTACGAAGACATCAACGTCTTGCGAAGCGAAATGAGGGACCTTTCGGCGAACAACGCCCAGATCTCCACCGCAATCTCCAATCTCTCCACTTCTGTCTACCACCTCACTTCCCTGGTCATGGCCCAATCAGAAATGATGCGGCAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGGAATACACGTATGCAGCAGTTGTGCAACGCGTGCCTGCCCCAATCATACCGCCAGATCTCGAAGCACCCTTCCCACCACTCATGCATCCTGGTGATCCTGCTCCCCGCCAAGACAACTAA

mRNA sequence

ATGGCCGGATCTTCAAGTCACCAAGATCAAACTAGAGTGCGTTCTGATGGCCCTAAATCAGAACGCCCCACATCACGGGGAAGTGGCGAACAAAGAACGCCACAATACACCTACTTGAAACACGGTAAGGGGAAGGTGTTACTGAAACCCCCGCCGGAAGCGTCTGACAATTTTTTGGAGGTAGAGGTTGATAACCAGGATACAGAGGCGGTGCTCAAATTTCTTAACGAACGAGCAAAGAAGAGGAAAGACGCTCACATCAAAAGAACCAAAGAAGGTCGTCACCGAAAGGACGAGCGTGAGCGAACAAGACTTGATGCAATTCGAAAGGCGAAGAACACATTAGAAATACGCTCACCGCTTAACGAAGTTGTAGAGCTTCACAAGAAGATCTCTGACAAGCTTGCACAAGTCTCGTTCGCCAAAACGAGGAAAACAATTGAGGAAGTTAAGGCGGCCTTAAAAAGGAAAGAAGAGAAGAAAAAGATGTTCGCAGAACTGAGCGAGCAAGTGGCAGAGCTCCCCGCGAAAGCAAGAGCATTGGAGCCAGAGAAAAACCTCAAAGCAATCGCAGAAGAATTCGAGGATGAGCTGGAGGCGAAGAGTCCACTTGATGACAGGCCACCGCCAAGAAAACCAAGGGAGGTCGCAGGACCAAGAGGAAGGAAGAAAGCTGGGCGTTCTGGACCTGAAGAGCGCTCATCAGGCGGCGACACCATAAGCAAAACACCCTCTATCAACTCTCTCATCAAAGTTGAGAAAGGACTGTTTCCGTTCAATGGTCAACTCCCAGACTTTCTCTACGCGCCAATTCAGGCGTTCGGATGGAAGTCATTTTTCAAAGGGCACACCAAAATAAGATTAGGAGTGGTGGAAAAGTTTTACACGGCTAAGCTCAACGCTGCAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAACGCGGAGGCCATCAACGCGTTGTATGATTTGCCCAATGACGTTGAAACCCTAGGGCAAATATACATAGACAGTCCTACGAAGAGGATGGCCCGTGAAGCGCTGGAAGTCATCGCATGGCCTGGGGCCACATGGGAAGTAACGCCAACATGGAAGTATCAGTTGTATCCACACCAGCTAACCACTGAAGCAAGCGTGTGGTTGTTCTTTATCAAGAAGAAGATCTTTCCAACGCGCCATGATAACACCATCAATTTAGAGTCAGCGATGCTACTCTATTGTATCCTGGCGAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTATCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCCTTAAAGTTGTGCCATTCTTATCCGCCATCCAAACCATCTCAATACAAGGCGGGCTGTGTAATCAAGTGGCCTTGAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTAGGCGACACACCTGAAGGAATGGCCCAAGCAGAAAGAAAAAGGAAATCCCCAGTCGTTGCATCAACCCCCCCACCTAAAGCCAAAAAAAACAAAGTCCAAAATTTCAGCAGCTCCAACCTTCCCCGCTCTTCTTCGCCCATTCCAATCACCCCACCATCACCAAACATCTCTCCCCGTCATTCACCTCTCCCCCACATTCATTCCCCTCTCAACATCCCTCACCTTTCCCCACGACCGCCTACCCCTTCGCCCACAAAATCTACTTCTCCTCTTCCTTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTGTTATTCTTTCGCCCATCATGGACCTGACCACTCTTCGCCATGACCAACCCGCGGCCAACATTGAGGTCATTGAGGTTTCTTCACCCATCACCCACCCGGCAAATCGTCCTTTGCGAACTTCTCCCATTCTTCTAATCTCAGAAGAGAACGCTCCTCCCACCAACCAATTGTCCCAACCATCACCACCGCCACCTATTATGGCTACCGCGGAAAATGTTGATGACCCACACGTTAAGGACAAAAACCCTATCCTTAATGAAGTTGGCGAGAGCGCTTCCTCTGCGCATACTCCCATCGCCCAACCTTCCACCACACTTCGAGACGATGAAGATTTTGGCGAAATATTGGGTTCCCTTCGTCCCAACGCCGAAAACCTTGTAACGCCCGCATCTTACGAAGACATCAACGTCTTGCGAAGCGAAATGAGGGACCTTTCGGCGAACAACGCCCAGATCTCCACCGCAATCTCCAATCTCTCCACTTCTGTCTACCACCTCACTTCCCTGGTCATGGCCCAATCAGAAATGATGCGGCAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGGAATACACGTATGCAGCAGTTGTGCAACGCGTGCCTGCCCCAATCATACCGCCAGATCTCGAAGCACCCTTCCCACCACTCATGCATCCTGGTGATCCTGCTCCCCGCCAAGACAACTAA

Coding sequence (CDS)

ATGGCCGGATCTTCAAGTCACCAAGATCAAACTAGAGTGCGTTCTGATGGCCCTAAATCAGAACGCCCCACATCACGGGGAAGTGGCGAACAAAGAACGCCACAATACACCTACTTGAAACACGGTAAGGGGAAGGTGTTACTGAAACCCCCGCCGGAAGCGTCTGACAATTTTTTGGAGGTAGAGGTTGATAACCAGGATACAGAGGCGGTGCTCAAATTTCTTAACGAACGAGCAAAGAAGAGGAAAGACGCTCACATCAAAAGAACCAAAGAAGGTCGTCACCGAAAGGACGAGCGTGAGCGAACAAGACTTGATGCAATTCGAAAGGCGAAGAACACATTAGAAATACGCTCACCGCTTAACGAAGTTGTAGAGCTTCACAAGAAGATCTCTGACAAGCTTGCACAAGTCTCGTTCGCCAAAACGAGGAAAACAATTGAGGAAGTTAAGGCGGCCTTAAAAAGGAAAGAAGAGAAGAAAAAGATGTTCGCAGAACTGAGCGAGCAAGTGGCAGAGCTCCCCGCGAAAGCAAGAGCATTGGAGCCAGAGAAAAACCTCAAAGCAATCGCAGAAGAATTCGAGGATGAGCTGGAGGCGAAGAGTCCACTTGATGACAGGCCACCGCCAAGAAAACCAAGGGAGGTCGCAGGACCAAGAGGAAGGAAGAAAGCTGGGCGTTCTGGACCTGAAGAGCGCTCATCAGGCGGCGACACCATAAGCAAAACACCCTCTATCAACTCTCTCATCAAAGTTGAGAAAGGACTGTTTCCGTTCAATGGTCAACTCCCAGACTTTCTCTACGCGCCAATTCAGGCGTTCGGATGGAAGTCATTTTTCAAAGGGCACACCAAAATAAGATTAGGAGTGGTGGAAAAGTTTTACACGGCTAAGCTCAACGCTGCAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAACGCGGAGGCCATCAACGCGTTGTATGATTTGCCCAATGACGTTGAAACCCTAGGGCAAATATACATAGACAGTCCTACGAAGAGGATGGCCCGTGAAGCGCTGGAAGTCATCGCATGGCCTGGGGCCACATGGGAAGTAACGCCAACATGGAAGTATCAGTTGTATCCACACCAGCTAACCACTGAAGCAAGCGTGTGGTTGTTCTTTATCAAGAAGAAGATCTTTCCAACGCGCCATGATAACACCATCAATTTAGAGTCAGCGATGCTACTCTATTGTATCCTGGCGAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTATCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCCTTAAAGTTGTGCCATTCTTATCCGCCATCCAAACCATCTCAATACAAGGCGGGCTGTGTAATCAAGTGGCCTTGAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTAGGCGACACACCTGAAGGAATGGCCCAAGCAGAAAGAAAAAGGAAATCCCCAGTCGTTGCATCAACCCCCCCACCTAAAGCCAAAAAAAACAAAGTCCAAAATTTCAGCAGCTCCAACCTTCCCCGCTCTTCTTCGCCCATTCCAATCACCCCACCATCACCAAACATCTCTCCCCGTCATTCACCTCTCCCCCACATTCATTCCCCTCTCAACATCCCTCACCTTTCCCCACGACCGCCTACCCCTTCGCCCACAAAATCTACTTCTCCTCTTCCTTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTGTTATTCTTTCGCCCATCATGGACCTGACCACTCTTCGCCATGACCAACCCGCGGCCAACATTGAGGTCATTGAGGTTTCTTCACCCATCACCCACCCGGCAAATCGTCCTTTGCGAACTTCTCCCATTCTTCTAATCTCAGAAGAGAACGCTCCTCCCACCAACCAATTGTCCCAACCATCACCACCGCCACCTATTATGGCTACCGCGGAAAATGTTGATGACCCACACGTTAAGGACAAAAACCCTATCCTTAATGAAGTTGGCGAGAGCGCTTCCTCTGCGCATACTCCCATCGCCCAACCTTCCACCACACTTCGAGACGATGAAGATTTTGGCGAAATATTGGGTTCCCTTCGTCCCAACGCCGAAAACCTTGTAACGCCCGCATCTTACGAAGACATCAACGTCTTGCGAAGCGAAATGAGGGACCTTTCGGCGAACAACGCCCAGATCTCCACCGCAATCTCCAATCTCTCCACTTCTGTCTACCACCTCACTTCCCTGGTCATGGCCCAATCAGAAATGATGCGGCAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGGAATACACGTATGCAGCAGTTGTGCAACGCGTGCCTGCCCCAATCATACCGCCAGATCTCGAAGCACCCTTCCCACCACTCATGCATCCTGGTGATCCTGCTCCCCGCCAAGACAACTAA

Protein sequence

MAGSSSHQDQTRVRSDGPKSERPTSRGSGEQRTPQYTYLKHGKGKVLLKPPPEASDNFLEVEVDNQDTEAVLKFLNERAKKRKDAHIKRTKEGRHRKDERERTRLDAIRKAKNTLEIRSPLNEVVELHKKISDKLAQVSFAKTRKTIEEVKAALKRKEEKKKMFAELSEQVAELPAKARALEPEKNLKAIAEEFEDELEAKSPLDDRPPPRKPREVAGPRGRKKAGRSGPEERSSGGDTISKTPSINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYTAKLNAAEFSVQISGKTVSFNAEAINALYDLPNDVETLGQIYIDSPTKRMAREALEVIAWPGATWEVTPTWKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTISIQGGLCNQVALNRMITFHGHKEMERRAKTLGDTPEGMAQAERKRKSPVVASTPPPKAKKNKVQNFSSSNLPRSSSPIPITPPSPNISPRHSPLPHIHSPLNIPHLSPRPPTPSPTKSTSPLPSKSPSPRRAEPLSPVILSPIMDLTTLRHDQPAANIEVIEVSSPITHPANRPLRTSPILLISEENAPPTNQLSQPSPPPPIMATAENVDDPHVKDKNPILNEVGESASSAHTPIAQPSTTLRDDEDFGEILGSLRPNAENLVTPASYEDINVLRSEMRDLSANNAQISTAISNLSTSVYHLTSLVMAQSEMMRQIAARHDRQFRTQMEYTYAAVVQRVPAPIIPPDLEAPFPPLMHPGDPAPRQDN

Homology

[Close]

BLAST of PI0020465 vs. ExPASy TrEMBL
Match: A0A5A7V6M5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00020 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.2e-43
Identity = 91/171 (53.22%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 285 KIRLGVVEKFYTAKLNAAEFSVQISGKTVSFNAEAINALYDLPNDVETLGQIYIDSPTKR 344
           KIR+ VV KFY  K N ++  + I  +   FN E IN LY+ PND E LGQ  +   TK 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 345 MAREALEVIAWPGATWEVTP-TWKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLES 404
           +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +D+TI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 405 AMLLYCILAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKVVPFL 455
            ++LYCI+ KK +NL E+I  +IL+WM  PK AMPFPS +E LCLK +P L
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSL 171

[Close]

BLAST of PI0020465 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-42
Identity = 116/304 (38.16%), Postives = 165/304 (54.28%), Query Frame = 0


Query: 135 LAQVSFAKTRKTIEEVKAALKRKEEKKKMFAELSEQVAELPAKARALEPEKNLKAIAEEF 194
           + +  F K  +  +E    LK++  K K+ A+  + +AE   + +    EK     ++EF
Sbjct: 9   IVESEFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERK----EKTTDEYSKEF 68

Query: 195 EDELEAKSPLDDR---PPPRKPREVAGPRGRK-----KAGRSGPEERSSGGDTISKTPSI 254
           E ELE  SPL+DR     P+K R + G    K     K  +   E + S  + +     +
Sbjct: 69  EKELEELSPLEDRVVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEEL 128

Query: 255 NSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYTAKLNAAEFSV 314
                +EKG+FPF GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N      
Sbjct: 129 GKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYA 188

Query: 315 QISGKTVSFNAEAINALYDLPNDVETLGQIYIDSPTKRMAREALEVIAWPGATWEVTPTW 374
            + GK V+F  + +N LY L     T+       P+    + ALE +AWPG  W++TP  
Sbjct: 189 IVKGKMVNFGPKVVNVLYGLRQ--TTVEYPIFKEPSDIDMQNALERVAWPGMKWDITPIK 248

Query: 375 KYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIATSI 431
           KYQL+PH L T ASVWL FIKK + PTRHDNTI+LE  MLLYCI+ +  +N+ E+I   I
Sbjct: 249 KYQLFPHNLKTTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPI 306

[Close]

BLAST of PI0020465 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-35
Identity = 107/285 (37.54%), Postives = 149/285 (52.28%), Query Frame = 0


Query: 192 EEF-EDELEAKSPL----DDRPPPRKPREVAGPRG--RKKAGRSGPEERSSGGDTISKTP 251
           +EF E++    SPL    +DR P +K + + G     R K  ++  EE S   +    + 
Sbjct: 32  DEFGEEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKTQQEEESQEIEDDVLSA 91

Query: 252 SINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYTAKLNAAEF 311
                  VEKG F F  QL  FL  PI+A GW+ F +G   IR GVV+ FY  K++  + 
Sbjct: 92  EERKHFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRSGVVKMFYNGKIDTEKH 151

Query: 312 SVQISGKTVSFNAEAINALYDLPNDVETLGQIYIDSPTKRMAREALEVIAWPGATWEVTP 371
              +  +               P+D +               +EALE +AW    W+VT 
Sbjct: 152 YAIVKERRE-------------PSDCD--------------MQEALERVAWARKKWDVTS 211

Query: 372 TWKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIAT 431
             KY+L+ H LTTEASVWL FIKKK+ PTRHDNTI+ E  MLLYCI+ +  V++ E+I  
Sbjct: 212 IKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIMEEIPVDVDEIICD 271

Query: 432 SILSWMRAPKGAMPFPSTIEALCLKVVPFL-SAIQTISIQGGLCN 469
            I +W++ P+GA PFP  IE LCL+    L  + Q   +Q G+CN
Sbjct: 272 HIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

[Close]

BLAST of PI0020465 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.9e-34
Identity = 83/163 (50.92%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 308  ISGKTVSFNAEAINALYDLPNDVETL-GQIYIDSPTKRMAREALEVIAWPGATWEVTPTW 367
            +  + V F  E IN LYDLPND+    GQ  I    +  A++ +++I WP A    TPT 
Sbjct: 1227 VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 1286

Query: 368  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIATSI 427
            + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++LYCI AKK  NLG ++  + 
Sbjct: 1287 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 1346

Query: 428  LSWMRAPKGAMPFPSTIEALCLKVV-PFLSAIQTISIQGGLCN 469
            LSWMR PK A PFP+T++ LCLK +      I  I + GG CN
Sbjct: 1347 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0020465 vs. ExPASy TrEMBL
Match: A0A5D3CVL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00870 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.9e-34
Identity = 83/163 (50.92%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 308 ISGKTVSFNAEAINALYDLPNDVETL-GQIYIDSPTKRMAREALEVIAWPGATWEVTPTW 367
           +  + V F  E IN LYDLPND+    GQ  I    +  A++ +++I WP A    TPT 
Sbjct: 66  VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 125

Query: 368 KYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIATSI 427
           + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++LYCI AKK  NLG ++  + 
Sbjct: 126 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 185

Query: 428 LSWMRAPKGAMPFPSTIEALCLKVV-PFLSAIQTISIQGGLCN 469
           LSWMR PK A PFP+T++ LCLK +      I  I + GG CN
Sbjct: 186 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 228

[Close]

BLAST of PI0020465 vs. NCBI nr
Match: KAA0062900.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 186.0 bits (471), Expect = 1.3e-42
Identity = 91/171 (53.22%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 285 KIRLGVVEKFYTAKLNAAEFSVQISGKTVSFNAEAINALYDLPNDVETLGQIYIDSPTKR 344
           KIR+ VV KFY  K N ++  + I  +   FN E IN LY+ PND E LGQ  +   TK 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 345 MAREALEVIAWPGATWEVTP-TWKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLES 404
           +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +D+TI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 405 AMLLYCILAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKVVPFL 455
            ++LYCI+ KK +NL E+I  +IL+WM  PK AMPFPS +E LCLK +P L
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSL 171

[Close]

BLAST of PI0020465 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 2.2e-42
Identity = 116/304 (38.16%), Postives = 165/304 (54.28%), Query Frame = 0


Query: 135 LAQVSFAKTRKTIEEVKAALKRKEEKKKMFAELSEQVAELPAKARALEPEKNLKAIAEEF 194
           + +  F K  +  +E    LK++  K K+ A+  + +AE   + +    EK     ++EF
Sbjct: 9   IVESEFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERK----EKTTDEYSKEF 68

Query: 195 EDELEAKSPLDDR---PPPRKPREVAGPRGRK-----KAGRSGPEERSSGGDTISKTPSI 254
           E ELE  SPL+DR     P+K R + G    K     K  +   E + S  + +     +
Sbjct: 69  EKELEELSPLEDRVVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEEL 128

Query: 255 NSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYTAKLNAAEFSV 314
                +EKG+FPF GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N      
Sbjct: 129 GKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYA 188

Query: 315 QISGKTVSFNAEAINALYDLPNDVETLGQIYIDSPTKRMAREALEVIAWPGATWEVTPTW 374
            + GK V+F  + +N LY L     T+       P+    + ALE +AWPG  W++TP  
Sbjct: 189 IVKGKMVNFGPKVVNVLYGLRQ--TTVEYPIFKEPSDIDMQNALERVAWPGMKWDITPIK 248

Query: 375 KYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIATSI 431
           KYQL+PH L T ASVWL FIKK + PTRHDNTI+LE  MLLYCI+ +  +N+ E+I   I
Sbjct: 249 KYQLFPHNLKTTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPI 306

[Close]

BLAST of PI0020465 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 161.8 bits (408), Expect = 2.6e-35
Identity = 107/285 (37.54%), Postives = 149/285 (52.28%), Query Frame = 0


Query: 192 EEF-EDELEAKSPL----DDRPPPRKPREVAGPRG--RKKAGRSGPEERSSGGDTISKTP 251
           +EF E++    SPL    +DR P +K + + G     R K  ++  EE S   +    + 
Sbjct: 32  DEFGEEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKTQQEEESQEIEDDVLSA 91

Query: 252 SINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYTAKLNAAEF 311
                  VEKG F F  QL  FL  PI+A GW+ F +G   IR GVV+ FY  K++  + 
Sbjct: 92  EERKHFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRSGVVKMFYNGKIDTEKH 151

Query: 312 SVQISGKTVSFNAEAINALYDLPNDVETLGQIYIDSPTKRMAREALEVIAWPGATWEVTP 371
              +  +               P+D +               +EALE +AW    W+VT 
Sbjct: 152 YAIVKERRE-------------PSDCD--------------MQEALERVAWARKKWDVTS 211

Query: 372 TWKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIAT 431
             KY+L+ H LTTEASVWL FIKKK+ PTRHDNTI+ E  MLLYCI+ +  V++ E+I  
Sbjct: 212 IKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIMEEIPVDVDEIICD 271

Query: 432 SILSWMRAPKGAMPFPSTIEALCLKVVPFL-SAIQTISIQGGLCN 469
            I +W++ P+GA PFP  IE LCL+    L  + Q   +Q G+CN
Sbjct: 272 HIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

[Close]

BLAST of PI0020465 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 1.4e-33
Identity = 83/163 (50.92%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 308  ISGKTVSFNAEAINALYDLPNDVETL-GQIYIDSPTKRMAREALEVIAWPGATWEVTPTW 367
            +  + V F  E IN LYDLPND+    GQ  I    +  A++ +++I WP A    TPT 
Sbjct: 1227 VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 1286

Query: 368  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIATSI 427
            + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++LYCI AKK  NLG ++  + 
Sbjct: 1287 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 1346

Query: 428  LSWMRAPKGAMPFPSTIEALCLKVV-PFLSAIQTISIQGGLCN 469
            LSWMR PK A PFP+T++ LCLK +      I  I + GG CN
Sbjct: 1347 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0020465 vs. NCBI nr
Match: TYK15967.1 (hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 1.4e-33
Identity = 83/163 (50.92%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 308 ISGKTVSFNAEAINALYDLPNDVETL-GQIYIDSPTKRMAREALEVIAWPGATWEVTPTW 367
           +  + V F  E IN LYDLPND+    GQ  I    +  A++ +++I WP A    TPT 
Sbjct: 66  VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 125

Query: 368 KYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCILAKKRVNLGELIATSI 427
           + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++LYCI AKK  NLG ++  + 
Sbjct: 126 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 185

Query: 428 LSWMRAPKGAMPFPSTIEALCLKVV-PFLSAIQTISIQGGLCN 469
           LSWMR PK A PFP+T++ LCLK +      I  I + GG CN
Sbjct: 186 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 228

The following BLAST results are available for this feature:

BLAST of PI0020465 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020465 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6M5	6.2e-43	53.22	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G0002...	[more]
A0A5A7TZE0	1.1e-42	38.16	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5D3DVQ6	1.3e-35	37.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U806	6.9e-34	50.92	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE...	[more]
A0A5D3CVL7	6.9e-34	50.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0020465 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062900.1	1.3e-42	53.22	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048500.1	2.2e-42	38.16	protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu...	[more]
KAA0054837.1	2.6e-35	37.54	hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777...	[more]
KAA0049609.1	1.4e-33	50.92	transposase [Cucumis melo var. makuwa]	[more]
TYK15967.1	1.4e-33	50.92	hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]	[more]

BLAST of PI0020465 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 518..535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 564..590
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 536..550
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..597

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020465.1	PI0020465.1	mRNA