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PI0020195 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGATCTTCTTCAACCTGATCAGGTACGTTGTGCTGAATTTGAATTTTAAGTTATATATTATTTTTTTACTATTATTTGTTTCATATAATATATTGTGTTTCAGATTATCTGGGAGCCGTACAAAGCTGTCTTGAATAATTTGTCGAATTTCTATAAGAACGGTCACGCCATATGGAAGATGGTTAGTCCTCTCATATGTGTTCACATGTGTAAGTGGCATCATCCTGACAGAACACTCAAACAGTTTGGTACTAAACAAGATGTTCTAGTTGATTGTAAAACTGAACCACTATTGCACAACATTGACCTGAGAACGACTGATTGGTCCGGTAGAGTTGCCCATTTGGTGATGCGATGACTAAATCGCAAAAGATTTATTGCTATGCGACTTTCGATTGGGCAATTTAATGATGTTGTAACTCGAGAATACATTGGTACAAAAATATTACCAGGCTTTATATCACTCGACCGGGAGCTGTTGTGGGTCATTTGGTACATATTTAAATATTGTCTACTTGTTTTTAGTACAAATTTATTTTGAATAGTTTCTAATTTATTTTAATATTTCACAGAGGTCGAACAATAGTAGGCTTCGGGATGTTGTAGATGATCCACAACAGATTCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGTTGTACCTATTGTACCTACACCAGTTCAAAGGATAACTTGTAGAAATACAAGTTATTGTAGCTTTTCAGGTAGAATAATGAAGTCATAATGCATCAGAAATAGAAAAAAATGGCATAAATTGATAAATGAAGAAGATAATTTGTCTCGTAGATTGTAAAAGGGTCATATTCCTGTTTTACGTGTTTTATCATGTCTTATGCAAACTTTTAAGGCGAAAAGAGAAGCAGCCACGTGAAGAAAACGTCAGGCGAGGAACTAGGCGTGCCGCAACGCAAGGCTAG ATGTTTGATCTTCTTCAACCTGATCAGATTATCTGGGAGCCGTACAAAGCTGTCTTGAATAATTTGTCGAATTTCTATAAGAACGGTCACGCCATATGGAAGATGAGGTCGAACAATAGTAGGCTTCGGGATGTTGTAGATGATCCACAACAGATTCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGCGAAAAGAGAAGCAGCCACGTGAAGAAAACGTCAGGCGAGGAACTAGGCGTGCCGCAACGCAAGGCTAG ATGTTTGATCTTCTTCAACCTGATCAGATTATCTGGGAGCCGTACAAAGCTGTCTTGAATAATTTGTCGAATTTCTATAAGAACGGTCACGCCATATGGAAGATGAGGTCGAACAATAGTAGGCTTCGGGATGTTGTAGATGATCCACAACAGATTCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGCGAAAAGAGAAGCAGCCACGTGAAGAAAACGTCAGGCGAGGAACTAGGCGTGCCGCAACGCAAGGCTAG MFDLLQPDQIIWEPYKAVLNNLSNFYKNGHAIWKMRSNNSRLRDVVDDPQQILDICNNNERYMENIHYMRKEKQPREENVRRGTRRAATQG Homology
BLAST of PI0020195 vs. ExPASy TrEMBL
Match: A0A5A7VEC1 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001470 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.9e-18 Identity = 53/99 (53.54%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of PI0020195 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.6e-16 Identity = 48/69 (69.57%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of PI0020195 vs. ExPASy TrEMBL
Match: A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.7e-16 Identity = 52/115 (45.22%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of PI0020195 vs. ExPASy TrEMBL
Match: A0A5D3CH23 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00320 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.7e-16 Identity = 52/115 (45.22%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of PI0020195 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.1e-13 Identity = 52/138 (37.68%), Postives = 59/138 (42.75%), Query Frame = 0
BLAST of PI0020195 vs. NCBI nr
Match: KAA0064245.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK18615.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17 Identity = 53/99 (53.54%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of PI0020195 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 3.3e-16 Identity = 48/69 (69.57%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of PI0020195 vs. NCBI nr
Match: KAA0038951.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 5.6e-16 Identity = 52/115 (45.22%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of PI0020195 vs. NCBI nr
Match: TYK11193.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 5.6e-16 Identity = 52/115 (45.22%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of PI0020195 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 4.4e-13 Identity = 52/138 (37.68%), Postives = 59/138 (42.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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