PI0020108 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTTCACCTTCATTTTCATCCTTTATCTTAGAGTCGTCTCGATCAACATCAGCCTCTGTCCATCTTGTCCTCATCCTCGAGCAAGTTATTCAATAACCAAATTTTAGATTATCCAATTACCTTAACCCTTTGCTTTTCATTCTCTCCTCCTCTCTAACCAAAAGATGAATAGTCTGTTCAAGAGAAGCACAATAAATAAGGGTAAGAAAGTGATTACAAATACAAAATGTAACAGATTTTTGGTGTCTATCAATGTCCTTGGGAGCACAGGACCAATTAGGTTTGTGGCAAATGAAGATGATTTGGTTTGTGAAGTTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAATTTTATTCTCTATTGTGTTAATGATGAAAAAAGGGATGGTATGTCTTTCACAAAACCGTACTTTAAATTTTCTTTTAACCATTATCATTTTGTTTTCATTCTTTTTTTTTTCTTTCTTTCTTTCTAACAGCTCTAAGCCCAAGGGAAAGCATAGGATCAAAGCAAGTAAGACACTTTTTGCTATGTAAGAAGCAAGGGACTTCACATCCATTATTGCTTAATGAGAAAATCTCAAAGCAAATGGAAGAAGAAAGGGGGAGAAATCATTGGAAGACATGGCTCAACAAATCATTGAGTTACAACATTCAATCTCAATGCATGCTGTAATTTTGCTGTAATTGATCCACGTGTTCTATAAATAATGGAGATCGATTCTCGTCCTATTTTCGTTTGTAAAAGTTGAAGACACGTATACAATGAATAAACTTTTTCGACACAACCTACTAGCTAATTAGTTAGTGGACAAAATAATTATCATCTCAAATGTTGATGGTTTG CTCTCTTCACCTTCATTTTCATCCTTTATCTTAGAGTCGTCTCGATCAACATCAGCCTCTGTCCATCTTGTCCTCATCCTCGAGCAAGTTATTCAATAACCAAATTTTAGATTATCCAATTACCTTAACCCTTTGCTTTTCATTCTCTCCTCCTCTCTAACCAAAAGATGAATAGTCTGTTCAAGAGAAGCACAATAAATAAGGGTAAGAAAGTGATTACAAATACAAAATGTAACAGATTTTTGGTGTCTATCAATGTCCTTGGGAGCACAGGACCAATTAGGTTTGTGGCAAATGAAGATGATTTGGTTTGTGAAGTTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAATTTTATTCTCTATTGTGTTAATGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAAGCATAGGATCAAAGCAAGTAAGACACTTTTTGCTATGTAAGAAGCAAGGGACTTCACATCCATTATTGCTTAATGAGAAAATCTCAAAGCAAATGGAAGAAGAAAGGGGGAGAAATCATTGGAAGACATGGCTCAACAAATCATTGAGTTACAACATTCAATCTCAATGCATGCTGTAATTTTGCTGTAATTGATCCACGTGTTCTATAAATAATGGAGATCGATTCTCGTCCTATTTTCGTTTGTAAAAGTTGAAGACACGTATACAATGAATAAACTTTTTCGACACAACCTACTAGCTAATTAGTTAGTGGACAAAATAATTATCATCTCAAATGTTGATGGTTTG ATGAATAGTCTGTTCAAGAGAAGCACAATAAATAAGGGTAAGAAAGTGATTACAAATACAAAATGTAACAGATTTTTGGTGTCTATCAATGTCCTTGGGAGCACAGGACCAATTAGGTTTGTGGCAAATGAAGATGATTTGGTTTGTGAAGTTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAATTTTATTCTCTATTGTGTTAATGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAAGCATAGGATCAAAGCAAGTAAGACACTTTTTGCTATGTAAGAAGCAAGGGACTTCACATCCATTATTGCTTAATGAGAAAATCTCAAAGCAAATGGAAGAAGAAAGGGGGAGAAATCATTGGAAGACATGGCTCAACAAATCATTGAGTTACAACATTCAATCTCAATGCATGCTGTAA MNSLFKRSTINKGKKVITNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEVIKTSLTLYARQARLPILGTNVDNFILYCVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHPLLLNEKISKQMEEERGRNHWKTWLNKSLSYNIQSQCML Homology
BLAST of PI0020108 vs. ExPASy TrEMBL
Match: A0A0A0L707 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 6.4e-71 Identity = 133/151 (88.08%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of PI0020108 vs. ExPASy TrEMBL
Match: A0A1S3C4I6 (uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.8e-65 Identity = 129/151 (85.43%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of PI0020108 vs. ExPASy TrEMBL
Match: A0A6J1CNZ1 (uncharacterized protein LOC111013214 OS=Momordica charantia OX=3673 GN=LOC111013214 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43 Identity = 97/128 (75.78%), Postives = 109/128 (85.16%), Query Frame = 0
BLAST of PI0020108 vs. ExPASy TrEMBL
Match: A0A6J1G8Y8 (uncharacterized protein LOC111452042 OS=Cucurbita moschata OX=3662 GN=LOC111452042 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.6e-42 Identity = 95/144 (65.97%), Postives = 111/144 (77.08%), Query Frame = 0
BLAST of PI0020108 vs. ExPASy TrEMBL
Match: A0A6J1K9B8 (uncharacterized protein LOC111492858 OS=Cucurbita maxima OX=3661 GN=LOC111492858 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.6e-40 Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 0
BLAST of PI0020108 vs. NCBI nr
Match: XP_011651392.1 (uncharacterized protein LOC105434881 [Cucumis sativus] >KGN57775.1 hypothetical protein Csa_010444 [Cucumis sativus]) HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70 Identity = 133/151 (88.08%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of PI0020108 vs. NCBI nr
Match: XP_038907220.1 (uncharacterized protein LOC120092999 [Benincasa hispida]) HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67 Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of PI0020108 vs. NCBI nr
Match: XP_008457016.1 (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]) HSP 1 Score: 258.5 bits (659), Expect = 3.7e-65 Identity = 129/151 (85.43%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of PI0020108 vs. NCBI nr
Match: XP_022143314.1 (uncharacterized protein LOC111013214 [Momordica charantia]) HSP 1 Score: 186.0 bits (471), Expect = 2.3e-43 Identity = 97/128 (75.78%), Postives = 109/128 (85.16%), Query Frame = 0
BLAST of PI0020108 vs. NCBI nr
Match: XP_022948336.1 (uncharacterized protein LOC111452042 [Cucurbita moschata]) HSP 1 Score: 181.0 bits (458), Expect = 7.5e-42 Identity = 95/144 (65.97%), Postives = 111/144 (77.08%), Query Frame = 0
BLAST of PI0020108 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 4.4e-24 Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 0
BLAST of PI0020108 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23 Identity = 63/139 (45.32%), Postives = 83/139 (59.71%), Query Frame = 0
BLAST of PI0020108 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 105.9 bits (263), Expect = 2.9e-23 Identity = 62/127 (48.82%), Postives = 81/127 (63.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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