PI0019973 (gene) Melon (PI 482460) v1

Overview


Name	PI0019973
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Legume-specific protein
Location	chr08: 22405967 .. 22406756 (+)
RNA-Seq Expression	PI0019973
Synteny	PI0019973

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAATCCCCCTCTCTCTCTCTTTTCCTTTTTTCTCCTCTCCACTGTCTCACAAATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCCCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCTACCACCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTGACAACTCGGCGGGTTGCTGCCTAATCCGATTGCCGGAGGTGGGTTTTTATCGGAAAAGGAAAAAGAAGTGTTTAATTTGTAATATTTGGGTTATATTTTGTCTGATTTAAAAAAAAAAAAAAAAAAAAAAGGAATCTTGAAGTGTACGGAAAGCCGAAAGGCACCGACGCTTGGGATATGATATGTGTAAATTGTGAATATTGATGAATGTATGGAAGTTTGATTAATTGGGTTGTTATTGTTTTGTTTTGATATTATGTTGGGACTGGGAGTAGTTAGATGTCAAATCCAAATGAAGCCATTAATAATAATAAAGAAGAAAAGAATATAGTAAGCAATGGGGGAGAGTTGTTGAAAAATCAAAGGGAGTATTAAATTGTATATGTATATATAGAAGAAAAGCGATGGGCTTCTTAAAATTGAAGAGATGGATGTGTAGCTTATACAAGTGAAAAAAATATATTTATAAATCCACTTAATTTCATTTTCGTA

mRNA sequence

TTCAAATCCCCCTCTCTCTCTCTTTTCCTTTTTTCTCCTCTCCACTGTCTCACAAATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCCCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCTACCACCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTGACAACTCGGCGGGTTGCTGCCTAATCCGATTGCCGGAGGTGGGTTTTTATCGGAAAAGGAAAAAGAAGTGTTTAATTTGTAATATTTGGGTTATATTTTGTCTGATTTAAAAAAAAAAAAAAAAAAAAAAGGAATCTTGAAGTGTACGGAAAGCCGAAAGGCACCGACGCTTGGGATATGATATGTGTAAATTGTGAATATTGATGAATGTATGGAAGTTTGATTAATTGGGTTGTTATTGTTTTGTTTTGATATTATGTTGGGACTGGGAGTAGTTAGATGTCAAATCCAAATGAAGCCATTAATAATAATAAAGAAGAAAAGAATATAGTAAGCAATGGGGGAGAGTTGTTGAAAAATCAAAGGGAGTATTAAATTGTATATGTATATATAGAAGAAAAGCGATGGGCTTCTTAAAATTGAAGAGATGGATGTGTAGCTTATACAAGTGAAAAAAATATATTTATAAATCCACTTAATTTCATTTTCGTA

Coding sequence (CDS)

ATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCCCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCTACCACCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTGACAACTCGGCGGGTTGCTGCCTAA

Protein sequence

MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTSSTTTQILVSTGVQSPLRHLTTRRVAA

Homology

[Close]

BLAST of PI0019973 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 TSSTTTQILVSTGVQSPLRHLTTRRVAA 89
          TSSTTTQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTTQILVSTGVQSPLRHLTTRRVAA 88

[Close]

BLAST of PI0019973 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.2e-38
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 TSSTT-TQILVSTGVQSPLRHLTTRRVAA 89
          TSSTT TQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89

[Close]

BLAST of PI0019973 vs. ExPASy TrEMBL
Match: K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.4e-22
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
          MEGLIPFVYKAI+QYK +K    I SWLC+SPS SY+RLP+GDSGRFQ Q      S AS
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSSKSPTSSTTTQILVSTGVQSPLRHLTTRRVAA 89
          PSS +P SS+ TQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

[Close]

BLAST of PI0019973 vs. ExPASy TrEMBL
Match: A0A0B2P904 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.5e-21
Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
          MEGLIPFVYKAI+QYK +K    I SWLC+SPS SY+RLP+GDSGRFQ Q      S AS
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSSKSPTSSTTTQILVSTGVQSPLRHLTTRRVAA 89
          PSS +P SS+ TQI+VS+GVQSP + LT R +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

[Close]

BLAST of PI0019973 vs. ExPASy TrEMBL
Match: C6SZB5 (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.3e-20
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
          ME LIPFVYKAI+QYK  K    I SWLC+SPS SY+RLP+GDSGRFQ +      S AS
Sbjct: 1  MESLIPFVYKAIMQYKGGKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIRAPASSFSAAS 60

Query: 61 PSSKSPTSSTTTQILVSTGVQSPLRHLTTRRVAA 89
          PSS +P SS+ TQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

[Close]

BLAST of PI0019973 vs. NCBI nr
Match: KAE8650999.1 (hypothetical protein Csa_002313 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 3.8e-38
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 3   GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS 62
           GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS
Sbjct: 109 GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS 168

Query: 63  STTTQILVSTGVQSPLRHLTTRRVAA 89
           STTTQILVSTGVQSPLRHLTTRRVAA
Sbjct: 169 STTTQILVSTGVQSPLRHLTTRRVAA 194

[Close]

BLAST of PI0019973 vs. NCBI nr
Match: KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 6.5e-38
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 TSSTT-TQILVSTGVQSPLRHLTTRRVAA 89
          TSSTT TQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89

[Close]

BLAST of PI0019973 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 80/90 (88.89%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ--FQSDASPSSK 60
          MEG+IPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ    S ASPSSK
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQDGSYSAASPSSK 60

Query: 61 SPTSSTTTQILVSTGVQSPLRHLTTRRVAA 89
          S  SSTTTQIL+STGVQSPLRHLT RRVAA
Sbjct: 61 S-ASSTTTQILISTGVQSPLRHLTPRRVAA 89

[Close]

BLAST of PI0019973 vs. NCBI nr
Match: KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.4 bits (363), Expect = 4.5e-31
Identity = 79/90 (87.78%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ--FQSDASPSSK 60
          MEG+IPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ    S ASPSSK
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQDGSYSAASPSSK 60

Query: 61 SPTSSTTTQILVSTGVQSPLRHLTTRRVAA 89
          S  SSTTTQIL+STGVQSPLRHLT RRV A
Sbjct: 61 S-ASSTTTQILISTGVQSPLRHLTPRRVVA 89

[Close]

BLAST of PI0019973 vs. NCBI nr
Match: KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.5 bits (319), Expect = 5.7e-26
Identity = 69/91 (75.82%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
          MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQSD S ++ SP
Sbjct: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYTATSP 60

Query: 61 T---SSTTTQILVSTGVQSPLRHLTTRRVAA 89
          +   SST TQILV+TGVQSPLR L   RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91

[Close]

BLAST of PI0019973 vs. TAIR 10
Match: AT2G37750.1 (unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQ--YKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSD------ 60
          MEGLIP VYKA++Q  Y NE Q            S+ Y+RLP GDSGRF  +SD      
Sbjct: 1  MEGLIPLVYKAVMQIRYGNESQ---------QLSSSYYVRLP-GDSGRF-VRSDLDVSGP 60

Query: 61 -ASPSSKSPTSSTTTQILVSTGVQSPL 79
           ++ S+++ +S++TT   V  GVQSP+
Sbjct: 61 GSNSSNRASSSTSTTTFAVYAGVQSPV 76

[Close]

BLAST of PI0019973 vs. TAIR 10
Match: AT5G02090.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05
Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTS--YIRLPSGDSGRFQ 49
          MEGLIPF+YKAIV YK E    ++      SPS +  Y+RLP   S RF+
Sbjct: 1  MEGLIPFLYKAIVMYKREGSFSSVLLSDHHSPSNAGYYMRLPGDSSSRFR 50

The following BLAST results are available for this feature:

BLAST of PI0019973 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019973 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD26	1.3e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1	[more]
A0A5D3DNC7	3.2e-38	98.88	Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
K7MT87	5.4e-22	65.96	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1	[more]
A0A0B2P904	3.5e-21	64.89	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1	[more]
C6SZB5	2.3e-20	63.83	Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of PI0019973 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650999.1	3.8e-38	100.00	hypothetical protein Csa_002313 [Cucumis sativus]	[more]
KAA0044116.1	6.5e-38	98.88	legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific p...	[more]
KAG7017269.1	1.6e-31	88.89	hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6580521.1	4.5e-31	87.78	hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6596392.1	5.7e-26	75.82	hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0019973 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37750.1	1.4e-06	43.68	unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bact...	[more]
AT5G02090.1	2.0e-05	50.00	unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..69
None	No IPR available	PANTHER	PTHR34670	EXPRESSED PROTEIN	coord: 1..88
None	No IPR available	PANTHER	PTHR34670:SF10	LEGUME-SPECIFIC PROTEIN	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019973.1	PI0019973.1	mRNA