PI0019941 (gene) Melon (PI 482460) v1

Overview


Name	PI0019941
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11: 6232706 .. 6236460 (-)
RNA-Seq Expression	PI0019941
Synteny	PI0019941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAGTGATATCGCACGTCCCATTAGCACCATTCTGGACGGTTCAAATTATATCACCTGGGCTCACCAAATGAGAAGTTTTTTGATTGGTCGAAAATTATGGCGCATAGTTACTGGCGACATCACCAAGCCTGTCAAACCAACTAAGAATGATGATGTAGATACTACCATTCAAGAGACTACTACCGAAAACAAGTACATTGAAAGTCTTGAGGACTGGGATAGCAAAAATCATCAAATCATCACATGGTTGGGTAACACCTCTATTCCAGCTATTCATACACAATTTGATGTTTTTGACACTGCAAAAGAACTTTGGGATTTTCTGTCCACACGCTTTCAATCTATTGGTCTGGCACATTATTATCAATTACATTCTTGCCTTGTTAGTCTAAACCAAGAAGTTGAACAACCTGTGAATGAATACCTTGCCACTCTTCAGCCCATATGGACTCATTAGATCAGGCAAAAATCAGTCCTGATCATATCTGTCTCATCAAAGTACTTATGGGACTCCGTCCAGAGTATGAATCTGTTCGGGCTGTCCTCTTACACCGCAACCCTCTACCATCTCTTGATGCCGCCGTTCAGGAAATCCTATTTGAGGAGAAAAGACTTGGCATTAGCTCCTCTATGCACTCTGATACTGCCCCCGCAACCACTCATTCACGGCCTACTAATGAGTTCACCTTCTGCAAATATTGTAAACTCCAGGGACACAAGCTTGCTAATTGTCCTACATTAAGTGCAGGTACTGTCACAAGCAAGGTCACATCTTGGAAAACTATCCAACTCGTCCACCGCGCCCTCCTGGTCACTCACACAAACCCAAGTCCTCACCTAATTCGGGTTCTTCATCTGTGGTTGCTGCTGCCACCTCATCTGACACTACACCATCTCCAAGCTTTCAGTTACATGATCTCCATGACTTACTGAAACAGGTGATCTCTTCCAACTCTACTGCCTTTGCTGCCACATCAGGTACTTCCTGGCTCCTTGATTCCGCTTGTTGCAACCATATGACCTCTGACATTTCATTATTGTCTTCCCCTACCCCTGTCCAATCCATTCCACCAATCCACTCTGCTGATGGTAATCAAATGGCTATTTCTCATATTGGAACTGTTCACACACCCACCATCAACCTTTCACACACTTATCATGTTCCAAATCTAACATTCAACCTAGCCTCTGTTGGCCAATTATGTGACCTTGGACTTAACATTATCTTTTCCTCTAATGGTTGTCAGGTTCAGGATCCTCAGACAGGCCACGTGATTGGTACGGGACGGAAGGTGGGAGATTATTTGAGCTCACTTCTCTTAACCACCCCTCTGTGCTTCCACCCATCTCTGCATCCGCCACAGACAATACAATATATCAGTGGCATCTTCGCCTTGGCCACGCCTCATCAGATAAACTTCGTAACCTAGTTTCTACTGGCACTTTAAATAATATTTCTAATTTAGTTCCTTTGATTGTTTAAATTGCAAACTTGCAAAATAACCTGCATTGTCATTTCCTATTTCTACTTCATTATGTGAAACACCTTTTGGCCTAATCCATTCTGACATTTGGGGTCCTGCTCCTTGTACTACTGTTAATGGCTATCGATACTTTGTCTTATTTATTGATGACTATTCTCGTTTTACTTGGATTTACTTTCTTAAACACCGTTCTTCCTTACCTCAAATTTACATTGACTTTGCCAATATGATTAAAACTCAATTCTCCAGCACAATTAAAATTCTTCGCACAGATAATGCGATGGAATAAAAAAACTCGCGCCTCCTGTCCTTCCTTACCCAACAGGGCACTCTCATCCAACGCTTATGTCCTCATACCTCCTAGCAAAATGGAAGAGCAGAACGCAAACACCGTCACATTCTAGACTCTGTTCGCGCTCAACTTCTATCTACCTCTTGTCCTGAAAATTTTTGGGGAGAAGCTGCCCTCACCTCTATTTATATCATCAACCGCCTTCCTTCTCTGGTCATTCACAATGTCTCTCCTTTTGAACGTCTATACGATACCTCCCCTTCTTACACTACTCTCAAAGTTTTTGGTTGTGCCTGTTTTGTGCTATTACCCCCTCATGAACATACCAAACTTGAACCTCGAGCCCGCCTATGCTGCTTCTTGGGATATGGTACTGAACATAAAGGTTTTCGTTGCTGGGATCCCATCTCTCAACGATTACGTATATCTTGACATGTCACTTTTTGGGAACATTGTATGTTTTCTAGTCTTTCTTCATTCCATACATCGCTATCTAGTCCCCATTCATTCTTCACCAACCCCTCTACTGATCTCTTCTCCCCCACTAACTCTCCACCTGATCCTACATCCACATCTGAGCTCACTCAATCTCACTCTACCTCTACGCTCCCGGTCCATCCATCTGCCCCCTCTGAGGAAGCTGAACCTGCACTTGTCCGCCGCTCCACTCGGGTAAGAGAAACTCCTTCTCATTTCCAAGATTACCATTGTTTTTCCACTATCATGTCTTTGGTTGAACCTTTTTCTTACAAGGGAGCCAGTACTAATCCCTTGTGGCAGCAAGCAATGGATGACGAACTTCGAGCCTTAGAAAAGACTCACACTTGGGACTATGTTGACTTGCCATCTGGCAAGAAACCTATTGGCTGTAAGTGGATATTCAAAATCAAAACTCACTCTGATGGGTCCATTGAAAGATATAAAGCTCGCCTTGTGGCCAAAGGCTATTCCCAGGAATATGGCATTAACTATGAAGAAACTTTTGCTCCTGTAGCTCACATGACGTCTGTCCGCAGTCTGTTAGCCATTGCCGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTCAAAAATGTGTTCCTCAATGGTACCCTATCTGAAGAAGTCTATATGAAACCTCCACCTGGTACTACTCCGCCAACTCAGAAAGTGTGTCTTCTTCGCCGTGCTCTTTGTGGTCTCAAACAAGCTCCCAGAGCGTGGTTTGCAACATTCAGTTCCACTATTACCCAACTTAGGTTCACCTCCAACTCTCATGACTTAGCCTTGTTTACTCGCCAGACACCCAGTGATATTGTTCTTGTCCTTTTATATGTTGATGACATGATCATTACAGGTGATGATCCCCAAGCCATATCGGACCTGCAATGTTACCTGGGTAAGCACTTTGAGATGAAGGACTTAGGCACCCTCAACTATTTTCTTGGCCTTGAGATATCATCATCTTCCTTTGGATATTACTTATCTCAAGCTAAGTATGCCTCTTATCTTCTCAACCGTTCTGGTATTACTGATTCTGCCACCTCCTCCACACCTCTGGATCCAAATGTTCGTCTCACCCCATTTGATGGTGTGCCCCTTGACGATCCCACCTTGTATCGGCAACTCGTTGGCAGCTTGATTTACCTAACTGTGACACGCCCAAATATTGCATATGTTGTTCACATTGTTAGTCAATTCATGGCTGCTCCCCGTACCATTCATTTCACTGCTGTCTTTCGTATACTACGCTATATAAAAGGCACTATAGGTCATGGTTTACAGTCCTCCTTAGTTCTCTCTGGCTTCTCTGATGCGGATTTGGTAGGAGATCCTACTGATCGTCGATCCACAACTGGTTACTGTTTCTACTTAGGTGATGCTCTTATCGGTTGGTGCAGCAAGAAACAATCTATTGTTTCCCGATTGAGCACAGAATCTGAATATCGTGCTCTTGTTGATGCCACTTCAGAACTTCTATGGCTCCGATGA

mRNA sequence

ATGGAGAAGAGTGATATCGCACGTCCCATTAGCACCATTCTGGACGGTTCAAATTATATCACCTGGGCTCACCAAATGAGAAGTTTTTTGATTGGTCGAAAATTATGGCGCATAGTTACTGGCGACATCACCAAGCCTGTCAAACCAACTAAGAATGATGATGTAGATACTACCATTCAAGAGACTACTACCGAAAACAAGTACATTGAAAGTCTTGAGGACTGGGATAGCAAAAATCATCAAATCATCACATGGTTGGCCCATATGGACTCATTAGATCAGGCAAAAATCAGTCCTGATCATATCTGTCTCATCAAAGTACTTATGGGACTCCGTCCAGAGTATGAATCTGTTCGGGCTGTCCTCTTACACCGCAACCCTCTACCATCTCTTGATGCCGCCGTTCAGGAAATCCTATTTGAGGAGAAAAGACTTGGCATTAGCTCCTCTATGCACTCTGATACTGCCCCCGCAACCACTCATTCACGGCCTACTAATGAGTACTGTCACAAGCAAGGTCACATCTTGGAAAACTATCCAACTCGTCCACCGCGCCCTCCTGGTCACTCACACAAACCCAAGTCCTCACCTAATTCGGGTTCTTCATCTGTGGTTGCTGCTGCCACCTCATCTGACACTACACCATCTCCAAGCTTTCAGTTACATGATCTCCATGACTTACTGAAACAGGTGATCTCTTCCAACTCTACTGCCTTTGCTGCCACATCAGGTACTTCCTGGCTCCTTGATTCCGCTTGTTGCAACCATATGACCTCTGACATTTCATTATTGTCTTCCCCTACCCCTGTCCAATCCATTCCACCAATCCACTCTGCTGATGGTAATCAAATGGCTATTTCTCATATTGGAACTGTTCACACACCCACCATCAACCTTTCACACACTTATCATGTTCCAAATCTAACATTCAACCTAGCCTCTGTTGGCCAATTATGTGACCTTGGACTTAACATTATCTTTTCCTCTAATGGTTGTCAGGTTCAGGATCCTCAGACAGGCCACGTGATTGGTACGGGACGGAAGCTCACTCAATCTCACTCTACCTCTACGCTCCCGGTCCATCCATCTGCCCCCTCTGAGGAAGCTGAACCTGCACTTGTCCGCCGCTCCACTCGGGTAAGAGAAACTCCTTCTCATTTCCAAGATTACCATTATCCTACTGATCGTCGATCCACAACTGGTTACTGTTTCTACTTAGGTGATGCTCTTATCGGTTGGTGCAGCAAGAAACAATCTATTGTTTCCCGATTGAGCACAGAATCTGAATATCGTGCTCTTGTTGATGCCACTTCAGAACTTCTATGGCTCCGATGA

Coding sequence (CDS)

ATGGAGAAGAGTGATATCGCACGTCCCATTAGCACCATTCTGGACGGTTCAAATTATATCACCTGGGCTCACCAAATGAGAAGTTTTTTGATTGGTCGAAAATTATGGCGCATAGTTACTGGCGACATCACCAAGCCTGTCAAACCAACTAAGAATGATGATGTAGATACTACCATTCAAGAGACTACTACCGAAAACAAGTACATTGAAAGTCTTGAGGACTGGGATAGCAAAAATCATCAAATCATCACATGGTTGGCCCATATGGACTCATTAGATCAGGCAAAAATCAGTCCTGATCATATCTGTCTCATCAAAGTACTTATGGGACTCCGTCCAGAGTATGAATCTGTTCGGGCTGTCCTCTTACACCGCAACCCTCTACCATCTCTTGATGCCGCCGTTCAGGAAATCCTATTTGAGGAGAAAAGACTTGGCATTAGCTCCTCTATGCACTCTGATACTGCCCCCGCAACCACTCATTCACGGCCTACTAATGAGTACTGTCACAAGCAAGGTCACATCTTGGAAAACTATCCAACTCGTCCACCGCGCCCTCCTGGTCACTCACACAAACCCAAGTCCTCACCTAATTCGGGTTCTTCATCTGTGGTTGCTGCTGCCACCTCATCTGACACTACACCATCTCCAAGCTTTCAGTTACATGATCTCCATGACTTACTGAAACAGGTGATCTCTTCCAACTCTACTGCCTTTGCTGCCACATCAGGTACTTCCTGGCTCCTTGATTCCGCTTGTTGCAACCATATGACCTCTGACATTTCATTATTGTCTTCCCCTACCCCTGTCCAATCCATTCCACCAATCCACTCTGCTGATGGTAATCAAATGGCTATTTCTCATATTGGAACTGTTCACACACCCACCATCAACCTTTCACACACTTATCATGTTCCAAATCTAACATTCAACCTAGCCTCTGTTGGCCAATTATGTGACCTTGGACTTAACATTATCTTTTCCTCTAATGGTTGTCAGGTTCAGGATCCTCAGACAGGCCACGTGATTGGTACGGGACGGAAGCTCACTCAATCTCACTCTACCTCTACGCTCCCGGTCCATCCATCTGCCCCCTCTGAGGAAGCTGAACCTGCACTTGTCCGCCGCTCCACTCGGGTAAGAGAAACTCCTTCTCATTTCCAAGATTACCATTATCCTACTGATCGTCGATCCACAACTGGTTACTGTTTCTACTTAGGTGATGCTCTTATCGGTTGGTGCAGCAAGAAACAATCTATTGTTTCCCGATTGAGCACAGAATCTGAATATCGTGCTCTTGTTGATGCCACTTCAGAACTTCTATGGCTCCGATGA

Protein sequence

MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTTENKYIESLEDWDSKNHQIITWLAHMDSLDQAKISPDHICLIKVLMGLRPEYESVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNEYCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSVVAAATSSDTTPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLLSSPTPVQSIPPIHSADGNQMAISHIGTVHTPTINLSHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQVQDPQTGHVIGTGRKLTQSHSTSTLPVHPSAPSEEAEPALVRRSTRVRETPSHFQDYHYPTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR

Homology

[Close]

BLAST of PI0019941 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.7e-08
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 396 RRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLW 443
           RRSTTG+C +LG  +I W +K+Q  VSR STE+EYRAL    +EL W
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of PI0019941 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.1e-06
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 396 RRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWL 444
           RRST+GY F L    + W SKKQ  V+  STE EY AL +AT E +WL
Sbjct: 86  RRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVWL 133

[Close]

BLAST of PI0019941 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.0e-06
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 395  DRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWL 444
            D  ST GY  YLG   I W SKKQ  V R STE+EYR++ + +SEL W+
Sbjct: 1306 DYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWI 1354

[Close]

BLAST of PI0019941 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 9.1e-06
Identity = 37/109 (33.94%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 352  SHSTSTLPVHPSAPSEEAEPALVRRSTRVRETPSH--------------FQDYHYPTDRR 411
            S++ + L      P+EE   AL R    +  TP+H              + D  +  D+ 
Sbjct: 1263 SYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKD 1322

Query: 412  ---STTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWL 444
               ST GY  YLG   I W SKKQ  V R STE+EYR++ + +SE+ W+
Sbjct: 1323 DYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWI 1371

[Close]

BLAST of PI0019941 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 52.8 bits (125), Expect = 1.2e-05
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 395  DRRSTTGYCFYLGD-ALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            DR+STTGY F + D  LI W +K+Q+ V+  STE+EY AL +A  E LWL+
Sbjct: 1262 DRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLK 1312

[Close]

BLAST of PI0019941 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 5.1e-145
Identity = 292/424 (68.87%), Postives = 313/424 (73.82%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQ 60
           MEK+D+ARPISTILDG+NYITWAHQMRSFLIGRKLWRIVTGDITKPVKP         + 
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP--------IVH 60

Query: 61  ETTTEN-KYIESLEDWDSKNHQIITW--LAH----------------------------- 120
           ET+ E+ +YIE LEDWDSKNHQIITW  LAH                             
Sbjct: 61  ETSAEDIQYIERLEDWDSKNHQIITWLGLAHYYQLHSTLVSLNQEMGQSVNEYLATLQPI 120

Query: 121 MDSLDQAKISPDHICLIKVLMGLRPEYESVRAVLLHRNPLPSLDAAVQEILFEEKRLGIS 180
              LDQAKISPDHI LIKVLMGLRPEYESVRA LLHRNPLPSLDAAVQEILFEEKRLGI 
Sbjct: 121 WTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIV 180

Query: 181 SSMHSDTAPATTHSRPTNE-----------------------YCHKQGHILENYPTRPPR 240
           SS+HSD A ATTH R  NE                       YCHK+GHIL+N PTRPPR
Sbjct: 181 SSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPR 240

Query: 241 PPGHSHKPKSSPNSGSSSVVAAATSSDTTPSPSFQLHDLHDLLKQVISSNSTAFAATSGT 300
           PPGHSHKPK S  +GSSSVVAAATS  T PS S QL DLHDLLKQVISS STA A T GT
Sbjct: 241 PPGHSHKPKFSHKAGSSSVVAAATSDITEPS-SLQLTDLHDLLKQVISSQSTALAVTPGT 300

Query: 301 SWLLDSACCNHMTSDISLLSSPTPVQSIPPIHSADGNQMAISHIGTVHTPTINLSHTYHV 360
           SWLLDSACCNHMTSDISLLSS  PVQS+PPIHSADGN M+ISHIGTV+TPTI LS+TYHV
Sbjct: 301 SWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHV 360

Query: 361 PNLTFNLASVGQLCDLGLNIIFSSNGCQVQDPQTGHVIGTGRKLTQSHSTSTLPVHPSAP 370
           PNLTFNLASVGQLCDLGL IIFSS+GCQVQD QTG VIGTGRK+ +    ++L   P  P
Sbjct: 361 PNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFP 415

[Close]

BLAST of PI0019941 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.0e-17
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 393  PTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            PTDRRSTTGYCFYLGDALI W SKKQS+VSR STESEYRAL DATSEL+WLR
Sbjct: 1169 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLR 1220

HSP 2 Score: 512.3 bits (1318), Expect = 2.0e-141
Identity = 290/456 (63.60%), Postives = 312/456 (68.42%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQ 60
           MEK+D+ARPISTILDG+NYITWAHQMRSFLIGRKLWRIVTGDITKPVKP         + 
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP--------IVH 60

Query: 61  ETTTEN-KYIESLEDWDSKNHQIITWLAHMD----------------------------- 120
           ET+ E+ +YIE LEDWDSKNHQIITWL +                               
Sbjct: 61  ETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIG 120

Query: 121 ----------------------------------SLDQAKISPDHICLIKVLMGLRPEYE 180
                                              LDQAKISPDHI LIKVLMGLRPEYE
Sbjct: 121 LAHYYQLHSTLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE 180

Query: 181 SVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNE--------- 240
           SVRA LLHRNPLPSLDAAVQEILFEEKRLGI SS+HSD A ATTH R  NE         
Sbjct: 181 SVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKL 240

Query: 241 --------------YCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSVVAAATSSDT 300
                         YCHK+GHIL+N PTRPPRPPGHSHKPK S  +GSSSVVAAATS  T
Sbjct: 241 HGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDIT 300

Query: 301 TPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLLSSPTPVQSI 360
            PS S QL DLHDLLKQVISS STA A T GTSWLLDSACCNHMTSDISLLSS  PVQS+
Sbjct: 301 EPS-SLQLTDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSL 360

Query: 361 PPIHSADGNQMAISHIGTVHTPTINLSHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQ 370
           PPIHSADGN M+ISHIGTV+TPTI LS+TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQ
Sbjct: 361 PPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQ 420

[Close]

BLAST of PI0019941 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.0e-17
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 393  PTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            PTDRRSTTGYCFYLGDALI W SKKQS+VSR STESEYRAL DATSEL+WLR
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLR 1252

HSP 2 Score: 510.4 bits (1313), Expect = 7.7e-141
Identity = 289/456 (63.38%), Postives = 311/456 (68.20%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQ 60
           MEK+D+ARPISTILDG+NYITWAHQMRSFLIGRKLWRIVTGDITKPVKP         + 
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP--------IVH 60

Query: 61  ETTTEN-KYIESLEDWDSKNHQIITWLAHMD----------------------------- 120
           ET+ E+ +YIE LEDWDSKNHQIITWL +                               
Sbjct: 61  ETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIG 120

Query: 121 ----------------------------------SLDQAKISPDHICLIKVLMGLRPEYE 180
                                              LDQAKISPDHI LIKVLMGLRPEYE
Sbjct: 121 LAHYYQLHSTLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE 180

Query: 181 SVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNE--------- 240
            VRA LLHRNPLPSLDAAVQEILFEEKRLGI SS+HSD A ATTH R  NE         
Sbjct: 181 PVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKL 240

Query: 241 --------------YCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSVVAAATSSDT 300
                         YCHK+GHIL+N PTRPPRPPGHSHKPK S  +GSSSVVAAATS  T
Sbjct: 241 HGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDIT 300

Query: 301 TPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLLSSPTPVQSI 360
            PS S QL DLHDLLKQVISS STA A T GTSWLLDSACCNHMTSDISLLSS  PVQS+
Sbjct: 301 EPS-SLQLTDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSL 360

Query: 361 PPIHSADGNQMAISHIGTVHTPTINLSHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQ 370
           PPIHSADGN M+ISHIGTV+TPTI LS+TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQ
Sbjct: 361 PPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQ 420

[Close]

BLAST of PI0019941 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.0e-17
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 393  PTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            PTDRRSTTGYCFYLGDALI W SKKQS+VSR STESEYRAL DATSEL+WLR
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLR 1252

HSP 2 Score: 509.2 bits (1310), Expect = 1.7e-140
Identity = 289/456 (63.38%), Postives = 310/456 (67.98%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQ 60
           MEK+D+ARPISTILDG+NYITWAHQMRSFLIGRKLWRIVTGDITKPVKP         + 
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP--------IVH 60

Query: 61  ETTTEN-KYIESLEDWDSKNHQIITWLAHMD----------------------------- 120
           ET+ EN +YIE LEDWDSKNHQIITWL +                               
Sbjct: 61  ETSAENIQYIEKLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKKLWDFLYTRFQSIG 120

Query: 121 ----------------------------------SLDQAKISPDHICLIKVLMGLRPEYE 180
                                              LDQAKISPDHI LIKVLMGLRPEYE
Sbjct: 121 LAHYYQLHSTLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE 180

Query: 181 SVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNE--------- 240
            VRA LLHRN LPSLDAAVQEILFEEKRLGI SS+HSD A ATTH R  NE         
Sbjct: 181 FVRAALLHRNSLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKL 240

Query: 241 --------------YCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSVVAAATSSDT 300
                         YCHK+GHIL+N PTRPPRPPGHSHKPK    +GSSSVVAAATS  T
Sbjct: 241 HGHKFANCPTIECKYCHKRGHILDNCPTRPPRPPGHSHKPKFFHKAGSSSVVAAATSDIT 300

Query: 301 TPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLLSSPTPVQSI 360
            PS S QL DLHDLLKQVISS STA A T GTSWLLDSACCNHMTSDISLLSS TPVQS+
Sbjct: 301 EPS-SLQLTDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHTPVQSL 360

Query: 361 PPIHSADGNQMAISHIGTVHTPTINLSHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQ 370
           PPIHSADGN M+ISHIGTV+TPTI LS+TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQ
Sbjct: 361 PPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQ 420

[Close]

BLAST of PI0019941 vs. ExPASy TrEMBL
Match: A0A5A7UVX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006520 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.0e-17
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 393  PTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            PTDRRSTTGYCFYLGDALI W SKKQS+VSR STESEYRAL DATSEL+WLR
Sbjct: 1118 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLR 1169

HSP 2 Score: 456.4 bits (1173), Expect = 1.3e-124
Identity = 266/454 (58.59%), Postives = 297/454 (65.42%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP------TKNDD 60
           MEKSDIARPIST LDGSNYITWAHQMRSFLIGRKLW IVTGDITKPVKP      T  + 
Sbjct: 1   MEKSDIARPIST-LDGSNYITWAHQMRSFLIGRKLWHIVTGDITKPVKPIPPVQSTGQNS 60

Query: 61  V---DTTIQETTTEN-KYIESLEDWDSKNHQIITWLAHMD-------------------- 120
           +   D    +TT E+ KYIE LEDWD KNHQIITWL +                      
Sbjct: 61  IEHNDIMDHDTTAEDIKYIERLEDWDRKNHQIITWLGNTSIPVIHTQFDAFDTAKELWDF 120

Query: 121 -------------------------------------------SLDQAKISPDHICLIKV 180
                                                       L+QAKIS DHI LIKV
Sbjct: 121 LYTRFQSIGLAHYYQLHSTLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISLDHIHLIKV 180

Query: 181 LMGLRPEYESVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNE 240
           LMGLRPEYESV A LLHRNPLPSLD A+Q+ILFEEKRL I SS+ SD A  T+  +PT+E
Sbjct: 181 LMGLRPEYESVYAALLHRNPLPSLDVAIQKILFEEKRLDIFSSLPSDVALTTSQLQPTHE 240

Query: 241 -----------------------YCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSV 300
                                  YCHK+GHIL++ PTRPPRPPGHSHKPK SP +G+SSV
Sbjct: 241 ISFCKNCKLHGHGFANCPTIECRYCHKRGHILDHCPTRPPRPPGHSHKPKFSPKAGTSSV 300

Query: 301 VAAATSSDTTPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLL 359
           VAAAT SD T   +FQL DLHDLLKQVISSNSTA A T GTSWLLD AC NHMTS+   L
Sbjct: 301 VAAATPSDITAPSTFQLTDLHDLLKQVISSNSTALAVTLGTSWLLDLACYNHMTSE---L 360

[Close]

BLAST of PI0019941 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 524.2 bits (1349), Expect = 1.1e-144
Identity = 292/424 (68.87%), Postives = 313/424 (73.82%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQ 60
           MEK+D+ARPISTILDG+NYITWAHQMRSFLIGRKLWRIVTGDITKPVKP         + 
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP--------IVH 60

Query: 61  ETTTEN-KYIESLEDWDSKNHQIITW--LAH----------------------------- 120
           ET+ E+ +YIE LEDWDSKNHQIITW  LAH                             
Sbjct: 61  ETSAEDIQYIERLEDWDSKNHQIITWLGLAHYYQLHSTLVSLNQEMGQSVNEYLATLQPI 120

Query: 121 MDSLDQAKISPDHICLIKVLMGLRPEYESVRAVLLHRNPLPSLDAAVQEILFEEKRLGIS 180
              LDQAKISPDHI LIKVLMGLRPEYESVRA LLHRNPLPSLDAAVQEILFEEKRLGI 
Sbjct: 121 WTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIV 180

Query: 181 SSMHSDTAPATTHSRPTNE-----------------------YCHKQGHILENYPTRPPR 240
           SS+HSD A ATTH R  NE                       YCHK+GHIL+N PTRPPR
Sbjct: 181 SSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPR 240

Query: 241 PPGHSHKPKSSPNSGSSSVVAAATSSDTTPSPSFQLHDLHDLLKQVISSNSTAFAATSGT 300
           PPGHSHKPK S  +GSSSVVAAATS  T PS S QL DLHDLLKQVISS STA A T GT
Sbjct: 241 PPGHSHKPKFSHKAGSSSVVAAATSDITEPS-SLQLTDLHDLLKQVISSQSTALAVTPGT 300

Query: 301 SWLLDSACCNHMTSDISLLSSPTPVQSIPPIHSADGNQMAISHIGTVHTPTINLSHTYHV 360
           SWLLDSACCNHMTSDISLLSS  PVQS+PPIHSADGN M+ISHIGTV+TPTI LS+TYHV
Sbjct: 301 SWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHV 360

Query: 361 PNLTFNLASVGQLCDLGLNIIFSSNGCQVQDPQTGHVIGTGRKLTQSHSTSTLPVHPSAP 370
           PNLTFNLASVGQLCDLGL IIFSS+GCQVQD QTG VIGTGRK+ +    ++L   P  P
Sbjct: 361 PNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFP 415

[Close]

BLAST of PI0019941 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-16
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 393  PTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            PTDRRSTTGYCFYLGDALI W SKKQS+VSR STESEYRAL DATSEL+WLR
Sbjct: 1169 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLR 1220

HSP 2 Score: 512.3 bits (1318), Expect = 4.2e-141
Identity = 290/456 (63.60%), Postives = 312/456 (68.42%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQ 60
           MEK+D+ARPISTILDG+NYITWAHQMRSFLIGRKLWRIVTGDITKPVKP         + 
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP--------IVH 60

Query: 61  ETTTEN-KYIESLEDWDSKNHQIITWLAHMD----------------------------- 120
           ET+ E+ +YIE LEDWDSKNHQIITWL +                               
Sbjct: 61  ETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIG 120

Query: 121 ----------------------------------SLDQAKISPDHICLIKVLMGLRPEYE 180
                                              LDQAKISPDHI LIKVLMGLRPEYE
Sbjct: 121 LAHYYQLHSTLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE 180

Query: 181 SVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNE--------- 240
           SVRA LLHRNPLPSLDAAVQEILFEEKRLGI SS+HSD A ATTH R  NE         
Sbjct: 181 SVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKL 240

Query: 241 --------------YCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSVVAAATSSDT 300
                         YCHK+GHIL+N PTRPPRPPGHSHKPK S  +GSSSVVAAATS  T
Sbjct: 241 HGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDIT 300

Query: 301 TPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLLSSPTPVQSI 360
            PS S QL DLHDLLKQVISS STA A T GTSWLLDSACCNHMTSDISLLSS  PVQS+
Sbjct: 301 EPS-SLQLTDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSL 360

Query: 361 PPIHSADGNQMAISHIGTVHTPTINLSHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQ 370
           PPIHSADGN M+ISHIGTV+TPTI LS+TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQ
Sbjct: 361 PPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQ 420

[Close]

BLAST of PI0019941 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-16
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 393  PTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            PTDRRSTTGYCFYLGDALI W SKKQS+VSR STESEYRAL DATSEL+WLR
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLR 1252

HSP 2 Score: 510.4 bits (1313), Expect = 1.6e-140
Identity = 289/456 (63.38%), Postives = 311/456 (68.20%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQ 60
           MEK+D+ARPISTILDG+NYITWAHQMRSFLIGRKLWRIVTGDITKPVKP         + 
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP--------IVH 60

Query: 61  ETTTEN-KYIESLEDWDSKNHQIITWLAHMD----------------------------- 120
           ET+ E+ +YIE LEDWDSKNHQIITWL +                               
Sbjct: 61  ETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIG 120

Query: 121 ----------------------------------SLDQAKISPDHICLIKVLMGLRPEYE 180
                                              LDQAKISPDHI LIKVLMGLRPEYE
Sbjct: 121 LAHYYQLHSTLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE 180

Query: 181 SVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNE--------- 240
            VRA LLHRNPLPSLDAAVQEILFEEKRLGI SS+HSD A ATTH R  NE         
Sbjct: 181 PVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKL 240

Query: 241 --------------YCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSVVAAATSSDT 300
                         YCHK+GHIL+N PTRPPRPPGHSHKPK S  +GSSSVVAAATS  T
Sbjct: 241 HGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDIT 300

Query: 301 TPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLLSSPTPVQSI 360
            PS S QL DLHDLLKQVISS STA A T GTSWLLDSACCNHMTSDISLLSS  PVQS+
Sbjct: 301 EPS-SLQLTDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSL 360

Query: 361 PPIHSADGNQMAISHIGTVHTPTINLSHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQ 370
           PPIHSADGN M+ISHIGTV+TPTI LS+TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQ
Sbjct: 361 PPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQ 420

[Close]

BLAST of PI0019941 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-16
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 393  PTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            PTDRRSTTGYCFYLGDALI W SKKQS+VSR STESEYRAL DATSEL+WLR
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLR 1252

HSP 2 Score: 509.2 bits (1310), Expect = 3.5e-140
Identity = 289/456 (63.38%), Postives = 310/456 (67.98%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTKNDDVDTTIQ 60
           MEK+D+ARPISTILDG+NYITWAHQMRSFLIGRKLWRIVTGDITKPVKP         + 
Sbjct: 1   MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP--------IVH 60

Query: 61  ETTTEN-KYIESLEDWDSKNHQIITWLAHMD----------------------------- 120
           ET+ EN +YIE LEDWDSKNHQIITWL +                               
Sbjct: 61  ETSAENIQYIEKLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKKLWDFLYTRFQSIG 120

Query: 121 ----------------------------------SLDQAKISPDHICLIKVLMGLRPEYE 180
                                              LDQAKISPDHI LIKVLMGLRPEYE
Sbjct: 121 LAHYYQLHSTLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE 180

Query: 181 SVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNE--------- 240
            VRA LLHRN LPSLDAAVQEILFEEKRLGI SS+HSD A ATTH R  NE         
Sbjct: 181 FVRAALLHRNSLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKL 240

Query: 241 --------------YCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSVVAAATSSDT 300
                         YCHK+GHIL+N PTRPPRPPGHSHKPK    +GSSSVVAAATS  T
Sbjct: 241 HGHKFANCPTIECKYCHKRGHILDNCPTRPPRPPGHSHKPKFFHKAGSSSVVAAATSDIT 300

Query: 301 TPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLLSSPTPVQSI 360
            PS S QL DLHDLLKQVISS STA A T GTSWLLDSACCNHMTSDISLLSS TPVQS+
Sbjct: 301 EPS-SLQLTDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHTPVQSL 360

Query: 361 PPIHSADGNQMAISHIGTVHTPTINLSHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQ 370
           PPIHSADGN M+ISHIGTV+TPTI LS+TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQ
Sbjct: 361 PPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQ 420

[Close]

BLAST of PI0019941 vs. NCBI nr
Match: KAA0058316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-16
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 393  PTDRRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWLR 445
            PTDRRSTTGYCFYLGDALI W SKKQS+VSR STESEYRAL DATSEL+WLR
Sbjct: 1118 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLR 1169

HSP 2 Score: 456.4 bits (1173), Expect = 2.7e-124
Identity = 266/454 (58.59%), Postives = 297/454 (65.42%), Query Frame = 0


Query: 1   MEKSDIARPISTILDGSNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP------TKNDD 60
           MEKSDIARPIST LDGSNYITWAHQMRSFLIGRKLW IVTGDITKPVKP      T  + 
Sbjct: 1   MEKSDIARPIST-LDGSNYITWAHQMRSFLIGRKLWHIVTGDITKPVKPIPPVQSTGQNS 60

Query: 61  V---DTTIQETTTEN-KYIESLEDWDSKNHQIITWLAHMD-------------------- 120
           +   D    +TT E+ KYIE LEDWD KNHQIITWL +                      
Sbjct: 61  IEHNDIMDHDTTAEDIKYIERLEDWDRKNHQIITWLGNTSIPVIHTQFDAFDTAKELWDF 120

Query: 121 -------------------------------------------SLDQAKISPDHICLIKV 180
                                                       L+QAKIS DHI LIKV
Sbjct: 121 LYTRFQSIGLAHYYQLHSTLVSLNQEVGQSVNEYLATLQPIWTQLEQAKISLDHIHLIKV 180

Query: 181 LMGLRPEYESVRAVLLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTAPATTHSRPTNE 240
           LMGLRPEYESV A LLHRNPLPSLD A+Q+ILFEEKRL I SS+ SD A  T+  +PT+E
Sbjct: 181 LMGLRPEYESVYAALLHRNPLPSLDVAIQKILFEEKRLDIFSSLPSDVALTTSQLQPTHE 240

Query: 241 -----------------------YCHKQGHILENYPTRPPRPPGHSHKPKSSPNSGSSSV 300
                                  YCHK+GHIL++ PTRPPRPPGHSHKPK SP +G+SSV
Sbjct: 241 ISFCKNCKLHGHGFANCPTIECRYCHKRGHILDHCPTRPPRPPGHSHKPKFSPKAGTSSV 300

Query: 301 VAAATSSDTTPSPSFQLHDLHDLLKQVISSNSTAFAATSGTSWLLDSACCNHMTSDISLL 359
           VAAAT SD T   +FQL DLHDLLKQVISSNSTA A T GTSWLLD AC NHMTS+   L
Sbjct: 301 VAAATPSDITAPSTFQLTDLHDLLKQVISSNSTALAVTLGTSWLLDLACYNHMTSE---L 360

[Close]

BLAST of PI0019941 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-11
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 396 RRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLWL 444
           RRST GYC +LG +LI W SKKQ +VS+ S E+EYRAL  AT E++WL
Sbjct: 457 RRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504

[Close]

BLAST of PI0019941 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 6.9e-09
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 396 RRSTTGYCFYLGDALIGWCSKKQSIVSRLSTESEYRALVDATSELLW 443
           RRSTTG+C +LG  +I W +K+Q  VSR STE+EYRAL    +EL W
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:

BLAST of PI0019941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92519	9.7e-08	57.45	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0CV72	3.1e-06	54.17	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q9ZT94	7.0e-06	53.06	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	9.1e-06	33.94	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.2e-05	52.94	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of PI0019941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDW0	5.1e-145	68.87	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VDW0	7.0e-17	88.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DG18	7.0e-17	88.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SZ66	7.0e-17	88.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UVX4	7.0e-17	88.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of PI0019941 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065380.1	1.1e-144	68.87	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0065380.1	1.4e-16	88.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0043149.1	1.4e-16	88.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0036574.1	1.4e-16	88.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0058316.1	1.4e-16	88.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of PI0019941 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.5e-11	62.50	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.9e-09	57.45	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 14..39 e-value: 9.1E-8 score: 31.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..218
None	No IPR available	PANTHER	PTHR37610	FAMILY NOT NAMED	coord: 158..348
None	No IPR available	PANTHER	PTHR37610:SF52	SUBFAMILY NOT NAMED	coord: 158..348
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 393..444 e-value: 1.22103E-23 score: 94.0721

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019941.1	PI0019941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding