PI0019822 (gene) Melon (PI 482460) v1

Overview


Name	PI0019822
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposable element Tf2
Location	chr06: 12774149 .. 12775896 (-)
RNA-Seq Expression	PI0019822
Synteny	PI0019822

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTCAAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGCCCGATAAAAACGATGCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAACCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAACCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCCTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAACAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCATCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATGTGAGCTCCGATTCCAGAAGAGGAGTCTCGTCTCACAACCTATGTGAGCTCCGAATCCAAATACCTATTTCAAAAAAAAAAAAAAAAAAAAAAAAGAAATAGGATCCAAATAAGAGTCTTCTAAAAAGAGACATCTATACAAAACATATTATTGATATTATTGTTATATATAAAAAAAAAAAAAAAAAAAAAACGTGATGTATATTCTCATCTCTAGTGTAATTAAAGAGTAAACTCTGTACATTTTCTAGTTTACTCAGTAAATATTGTTCCGTCATCCAGAAATCCAGGCGAAAAATGAAGACAACAAAGCTTCAAGAAATTGCGTATTTCATGGAGTATTCGACTACGTTAGATGGTCCCGGCAGTAAGTCGCAAGATTTGGCGCGGTGAGCCCGTTGGTCAGTCTGTAATCCGCCGTGGGGAATACGATTAG

mRNA sequence

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTCAAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGCCCGATAAAAACGATGCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAACCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAACCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCATCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATTTTACTCAGTAAATATTGTTCCGTCATCCAGAAATCCAGGCGAAAAATGAAGACAACAAAGCTTCAAGAAATTGCGTATTTCATGGAGTATTCGACTACGTTAGATGGTCCCGGCATAAGTCGCAAGATTTGGCGCGGTGAGCCCGTTGGTCAGTCTGTAATCCGCCGTGGGGAATACGATTAG

Coding sequence (CDS)

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTCAAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGCCCGATAAAAACGATGCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAACCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAACCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCATCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATTTTACTCAGTAAATATTGTTCCGTCATCCAGAAATCCAGGCGAAAAATGAAGACAACAAAGCTTCAAGAAATTGCGTATTTCATGGAGTATTCGACTACGTTAGATGGTCCCGGCATAAGTCGCAAGATTTGGCGCGGTGAGCCCGTTGGTCAGTCTGTAATCCGCCGTGGGGAATACGATTAG

Protein sequence

MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINQPIGTKEFLQKNPFQNLSYLNPTLTRITSKLGLELFENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSSSSSIQEDDELASPEYDLNDPFLDSQPILLSKYCSVIQKSRRKMKTTKLQEIAYFMEYSTTLDGPGISRKIWRGEPVGQSVIRRGEYD

Homology

[Close]

BLAST of PI0019822 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.4e-66
Identity = 141/178 (79.21%), Postives = 154/178 (86.52%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +RS GI I 
Sbjct: 1   MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEI 120
           SPTESSTPPRPS NL+RPS G+ QMRPPASP SN ESSTPPTTYSQAV P+KRF+PRPEI
Sbjct: 61  SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPEI 120

Query: 121 KTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTK 177
           K+YFQK +V+YDPIIE EYQSLT +ETVSKIFPE FNFL EDLRKTRKFYEFIL DTK
Sbjct: 121 KSYFQKPIVVYDPIIELEYQSLTSEETVSKIFPEDFNFLLEDLRKTRKFYEFILADTK 178

[Close]

BLAST of PI0019822 vs. ExPASy TrEMBL
Match: E5GCE6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.3e-59
Identity = 126/167 (75.45%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG RPSSS N  PSPMSA QY MDLGFT VTRS++R S I I 
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEI 120
           SPTESSTPPRPS NL+RPSGG+ QMRPPASP SN ESSTPPTTYSQAV  +KRF+PRPEI
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEI 120

Query: 121 KTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR 166
           K+YFQK +V+YDPIIEPEYQSLT++E VSKIFP+ FNFLPEDL+K +
Sbjct: 121 KSYFQKSIVVYDPIIEPEYQSLTLEEMVSKIFPKDFNFLPEDLKKKK 167

[Close]

BLAST of PI0019822 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-58
Identity = 158/321 (49.22%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+ PSSS N APSPMS DQYAMDLG+TTV +S+++SSGI I 
Sbjct: 1   MSSKKGSARGRTNSTSSKGNCPSSSSNSAPSPMSVDQYAMDLGYTTVIQSRSKSSGIWIR 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEI 120
           SP ESSTPPRPS NL+ P G + QMR  ASP SN ESST PTTYSQAV P+K+F+PR EI
Sbjct: 61  SPMESSTPPRPSVNLIHPFGEVIQMRSSASPSSNRESSTLPTTYSQAVTPDKQFVPRIEI 120

Query: 121 KTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSV 180
           K+YFQK +VIYDPIIE EYQ                                        
Sbjct: 121 KSYFQKPIVIYDPIIELEYQ---------------------------------------- 180

Query: 181 EITHVPDKNDASKIAYSKLKIFKAINQPIGTKEFLQKNPFQNLSYLNPTLTRITSKLGLE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 219

Query: 241 LFENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSSSSSIQ 300
             +NG LQDIDQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAVN S+SSK + S IQ
Sbjct: 241 --KNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 219

Query: 301 EDDELASPEYDLNDPFLDSQP 320
           ED+E    EYDL+DPFLDSQP
Sbjct: 301 EDEEQVDLEYDLDDPFLDSQP 219

[Close]

BLAST of PI0019822 vs. ExPASy TrEMBL
Match: A0A5D3E4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00750 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 9.1e-58
Identity = 125/165 (75.76%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+R SSS N APSPMSADQYAMDLGFT VTRS++R SGI I 
Sbjct: 1   MSSKKGNARGRTNSTSSKGNRLSSSSNSAPSPMSADQYAMDLGFTIVTRSRSRLSGIGIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEI 120
            PTESSTPPRPSANL+RP G + QM+PPASP SN +SSTPPTTYSQAV P+KRF+PRP+I
Sbjct: 61  FPTESSTPPRPSANLIRPFGRVVQMKPPASPSSNRKSSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK 164
           K YFQK +V+YDP IE EYQSLT++E VSKIFPE FNFLPEDLRK
Sbjct: 121 KFYFQKSIVVYDPTIELEYQSLTLEEAVSKIFPEDFNFLPEDLRK 165

[Close]

BLAST of PI0019822 vs. ExPASy TrEMBL
Match: A0A5D3BM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00180 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-53
Identity = 109/137 (79.56%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 31  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPL 90
           MSADQYAMDLGFTTVTRS++RSS IRIES TESSTPPRPSANL+RP GG  QMRPPASP 
Sbjct: 1   MSADQYAMDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPS 60

Query: 91  SNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIF 150
           SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK +V+YD IIEPEYQS+T+++TVSKIF
Sbjct: 61  SNRESSTPPTTYSQTVTPDKRFVPRPEIKSYFQKSIVVYDLIIEPEYQSITLEKTVSKIF 120

Query: 151 PEGFNFLPEDLRKTRKF 168
            + FN LPEDLRKTR F
Sbjct: 121 LDNFNLLPEDLRKTRNF 137

[Close]

BLAST of PI0019822 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 2.9e-66
Identity = 141/178 (79.21%), Postives = 154/178 (86.52%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +RS GI I 
Sbjct: 1   MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEI 120
           SPTESSTPPRPS NL+RPS G+ QMRPPASP SN ESSTPPTTYSQAV P+KRF+PRPEI
Sbjct: 61  SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPEI 120

Query: 121 KTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTK 177
           K+YFQK +V+YDPIIE EYQSLT +ETVSKIFPE FNFL EDLRKTRKFYEFIL DTK
Sbjct: 121 KSYFQKPIVVYDPIIELEYQSLTSEETVSKIFPEDFNFLLEDLRKTRKFYEFILADTK 178

[Close]

BLAST of PI0019822 vs. NCBI nr
Match: ADN34145.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 238.0 bits (606), Expect = 1.3e-58
Identity = 126/167 (75.45%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG RPSSS N  PSPMSA QY MDLGFT VTRS++R S I I 
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEI 120
           SPTESSTPPRPS NL+RPSGG+ QMRPPASP SN ESSTPPTTYSQAV  +KRF+PRPEI
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEI 120

Query: 121 KTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR 166
           K+YFQK +V+YDPIIEPEYQSLT++E VSKIFP+ FNFLPEDL+K +
Sbjct: 121 KSYFQKSIVVYDPIIEPEYQSLTLEEMVSKIFPKDFNFLPEDLKKKK 167

[Close]

BLAST of PI0019822 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 236.9 bits (603), Expect = 2.9e-58
Identity = 158/321 (49.22%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+ PSSS N APSPMS DQYAMDLG+TTV +S+++SSGI I 
Sbjct: 1   MSSKKGSARGRTNSTSSKGNCPSSSSNSAPSPMSVDQYAMDLGYTTVIQSRSKSSGIWIR 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEI 120
           SP ESSTPPRPS NL+ P G + QMR  ASP SN ESST PTTYSQAV P+K+F+PR EI
Sbjct: 61  SPMESSTPPRPSVNLIHPFGEVIQMRSSASPSSNRESSTLPTTYSQAVTPDKQFVPRIEI 120

Query: 121 KTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSV 180
           K+YFQK +VIYDPIIE EYQ                                        
Sbjct: 121 KSYFQKPIVIYDPIIELEYQ---------------------------------------- 180

Query: 181 EITHVPDKNDASKIAYSKLKIFKAINQPIGTKEFLQKNPFQNLSYLNPTLTRITSKLGLE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 219

Query: 241 LFENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSSSSSIQ 300
             +NG LQDIDQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAVN S+SSK + S IQ
Sbjct: 241 --KNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 219

Query: 301 EDDELASPEYDLNDPFLDSQP 320
           ED+E    EYDL+DPFLDSQP
Sbjct: 301 EDEEQVDLEYDLDDPFLDSQP 219

[Close]

BLAST of PI0019822 vs. NCBI nr
Match: KAA0026217.1 (hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK30739.1 hypothetical protein E5676_scaffold343G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-57
Identity = 125/165 (75.76%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+R SSS N APSPMSADQYAMDLGFT VTRS++R SGI I 
Sbjct: 1   MSSKKGNARGRTNSTSSKGNRLSSSSNSAPSPMSADQYAMDLGFTIVTRSRSRLSGIGIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEI 120
            PTESSTPPRPSANL+RP G + QM+PPASP SN +SSTPPTTYSQAV P+KRF+PRP+I
Sbjct: 61  FPTESSTPPRPSANLIRPFGRVVQMKPPASPSSNRKSSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK 164
           K YFQK +V+YDP IE EYQSLT++E VSKIFPE FNFLPEDLRK
Sbjct: 121 KFYFQKSIVVYDPTIELEYQSLTLEEAVSKIFPEDFNFLPEDLRK 165

[Close]

BLAST of PI0019822 vs. NCBI nr
Match: KAE8646253.1 (hypothetical protein Csa_023844, partial [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 3.5e-56
Identity = 118/153 (77.12%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 9   RVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPR 68
           R +STSS+G+RPSSS N APSPMSADQYAMDLGFTTVTRS+ARSS I+I SPT+SSTPPR
Sbjct: 1   RANSTSSRGNRPSSSSNSAPSPMSADQYAMDLGFTTVTRSRARSSRIQIGSPTKSSTPPR 60

Query: 69  PSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVI 128
            SANL+RPS  + QMRP ASPLSN ESSTPPTTYSQ + P+KRF+PR EIK+YFQK V++
Sbjct: 61  TSANLIRPSSEVVQMRPLASPLSNRESSTPPTTYSQVITPDKRFVPRLEIKSYFQKPVIV 120

Query: 129 YDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDL 162
           YD IIEPEYQSLT++ETVSKIFP+ FNFLP+DL
Sbjct: 121 YDSIIEPEYQSLTLEETVSKIFPDNFNFLPDDL 153

The following BLAST results are available for this feature:

BLAST of PI0019822 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019822 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TM80	1.4e-66	79.21	Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
E5GCE6	6.3e-59	75.45	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3BI61	1.4e-58	49.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E4J4	9.1e-58	75.76	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BM67	4.0e-53	79.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0019822 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043136.1	2.9e-66	79.21	putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative...	[more]
ADN34145.1	1.3e-58	75.45	hypothetical protein [Cucumis melo subsp. melo]	[more]
TYJ98361.1	2.9e-58	49.22	hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]	[more]
KAA0026217.1	1.9e-57	75.76	hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK3073...	[more]
KAE8646253.1	3.5e-56	77.12	hypothetical protein Csa_023844, partial [Cucumis sativus]	[more]

BLAST of PI0019822 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 112..203
None	No IPR available	PANTHER	PTHR46249:SF31	BNAC08G47480D PROTEIN	coord: 112..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019822.1	PI0019822.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding