PI0019721 (gene) Melon (PI 482460) v1

Overview


Name	PI0019721
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	serine-rich protein-related
Location	chr06: 26978376 .. 26980009 (-)
RNA-Seq Expression	PI0019721
Synteny	PI0019721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATATGAACAAAAATTAAGAATATCTTGCTTTTCATACCCTCTCTCTCTCATTTGGTAGAGACGCAGGGTTCCAGTCTTCTCCCTAAACACAAGCTAAGGTATTTATTTTTGTAAGTTTATTGTAATTGATTTGTGTTTTACTTCGTCGGGAGATACCGACGGTCGATTTTGTATTTATAGCGTCAGAAGATCAACTCCTGATCACATTACTGACAAATTTTCGTGTATTTCTTGTAGTTAACCTTACTGCTTTAAATGTTTCAATGATTCAAATGTTTTTTTGTCATTGTTAAAAGATAGGTTAATTAACTAACCATTTTGAGTGTTCTTATAGTTTATGTTTGCTTTAACATGTTTGTATCGATTCGTTTAAAGCATGTATTTGGATATGATTGATCGTGTCGGAAGGAGACAATGAATTCATGTTCATGAAAAAAATGTAACACAATAAATATTAGGTAGATATTGTTAGATATTAAATAGAGCTATAAAAGATTAAATTAAAATCTTAAAAATTATATTGGACCAAATTGAAACCCTCACACACCCTAAAATTAATTTGTTGTTTAATTTTAACTTTCAATTGTGTTTAAGTTAACTTTTTTTTTTTTTGTTAGTTCCAGTGTTTAATTTTGAAAACAAATCATTTTATAAAATTTAAATTGTTTGATAACCACTTAAAATTGTTTTACGAACCCTTTCAAAATTTATTATAAACAGTTTCTAACAAAAGAAATTAAACAAAAAATTGTTTCTTTCTCTAATCAATCTACATAAACCCGTTATAAAATAATGAAAAAAAAAAAACAATAAAATCATTTCAATACATGTTAGGTAGAGACTATTTATAAAAGTATTATCAAATCATAAAAATTAAATTCTAAGTTTCGAACCAAATTTATAATTTTAACCAAAAGTAAATTAATGTGTTTGGTTGTTGAGTATTTATAATGAATAATAATTTTAAGGATAATTTATTTTTAAAAATTATTGTAAGAGAGTTCTTTATGAAAAAAATGTTGAAATATATATATATATTTGAAACTTTCTTATAATTTGTAGATAAATGGAGGGAAGAGTGGAGGGGAAAACTGAGAGTTCAAAAATGGGAGCATTGCCGGAATACGACATGGAAGAGCTAAAGAAAACGCCAAATTTATTGCTCTCACCCACAGCTTTATCTCGCTTCTCAAAATCCAATTGTTTGTGTTCTCCTACCACTCACATTGGTTCTTTTCGATGTCGCCGTCACCGGAGCTCTGCCATGACTCGTGGTGGCTCCGTCGGCTCCAACCTCTCTGATTTGGCTCGCAACTCCGACGACTCTGCCAGTGACTCGGTTTGAGGTTTCAAATTCAATCATTTTACTAAAAACCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTAACCTTATAGGGAAAATTAAAGCTTACAATGAATTCTATTGCTGTGTTCATTTTATAAAACCATGTAATAGCTATTAACTTTATTTTGAATTTACTTTGTTTGATAATTATATTTAATGTTCGAGAAATCATACGAATCGTTGTAAAGAGGTAAGGATCTTTACCTTTAACTTCTTACTCGTTGATAATGTTTTGGTGAAAATATAAGTAATTTGTTT

mRNA sequence

AAAAAATATGAACAAAAATTAAGAATATCTTGCTTTTCATACCCTCTCTCTCTCATTTGGTAGAGACGCAGGGTTCCAGTCTTCTCCCTAAACACAAGCTAAGATAAATGGAGGGAAGAGTGGAGGGGAAAACTGAGAGTTCAAAAATGGGAGCATTGCCGGAATACGACATGGAAGAGCTAAAGAAAACGCCAAATTTATTGCTCTCACCCACAGCTTTATCTCGCTTCTCAAAATCCAATTGTTTGTGTTCTCCTACCACTCACATTGGTTCTTTTCGATGTCGCCGTCACCGGAGCTCTGCCATGACTCGTGGTGGCTCCGTCGGCTCCAACCTCTCTGATTTGGCTCGCAACTCCGACGACTCTGCCAGTGACTCGGTTTGAGGTTTCAAATTCAATCATTTTACTAAAAACCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTAACCTTATAGGGAAAATTAAAGCTTACAATGAATTCTATTGCTGTGTTCATTTTATAAAACCATGTAATAGCTATTAACTTTATTTTGAATTTACTTTGTTTGATAATTATATTTAATGTTCGAGAAATCATACGAATCGTTGTAAAGAGGTAAGGATCTTTACCTTTAACTTCTTACTCGTTGATAATGTTTTGGTGAAAATATAAGTAATTTGTTT

Coding sequence (CDS)

ATGGAGGGAAGAGTGGAGGGGAAAACTGAGAGTTCAAAAATGGGAGCATTGCCGGAATACGACATGGAAGAGCTAAAGAAAACGCCAAATTTATTGCTCTCACCCACAGCTTTATCTCGCTTCTCAAAATCCAATTGTTTGTGTTCTCCTACCACTCACATTGGTTCTTTTCGATGTCGCCGTCACCGGAGCTCTGCCATGACTCGTGGTGGCTCCGTCGGCTCCAACCTCTCTGATTTGGCTCGCAACTCCGACGACTCTGCCAGTGACTCGGTTTGA

Protein sequence

MEGRVEGKTESSKMGALPEYDMEELKKTPNLLLSPTALSRFSKSNCLCSPTTHIGSFRCRRHRSSAMTRGGSVGSNLSDLARNSDDSASDSV

Homology

[Close]

BLAST of PI0019721 vs. ExPASy TrEMBL
Match: A0A6J1CNY2 (uncharacterized protein LOC111013367 OS=Momordica charantia OX=3673 GN=LOC111013367 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19
Identity = 59/83 (71.08%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 8  KTESSKMGALPEYDMEELKKTP-NLLLSPTALSRFS-----KSNCLCSPTTHIGSFRCRR 67
          KT ++K  ALPE D++ELKK+  NL++SPTALSR S     KSNCLCSPTTHIGSFRCRR
Sbjct: 16 KTPTAK-SALPELDLDELKKSSHNLVMSPTALSRMSKSPSTKSNCLCSPTTHIGSFRCRR 75

Query: 68 HRSSAMTRGGSVGSNLSDLARNS 85
          HRS+A++RGGSVGSNLSDLA+ S
Sbjct: 76 HRSTAISRGGSVGSNLSDLAQKS 97

[Close]

BLAST of PI0019721 vs. ExPASy TrEMBL
Match: A0A0A0L7C7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045050 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.8e-18
Identity = 54/83 (65.06%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 8  KTESSKMGALPEYDMEELKKTPNLLLSPTALSRFS-----KSNCLCSPTTHIGSFRCRRH 67
          KT +SK  A+ E + ++LKK  NLL+SPTALSR +     KSNCLCSPTTHIGSFRCRRH
Sbjct: 16 KTPTSK-SAMVETEFDDLKKNANLLMSPTALSRMTKSRSIKSNCLCSPTTHIGSFRCRRH 75

Query: 68 RSSAMTRGGSVGSNLSDLARNSD 86
          RS++++RGGSVGSNLSDL + S+
Sbjct: 76 RSTSISRGGSVGSNLSDLVQKSE 97

[Close]

BLAST of PI0019721 vs. ExPASy TrEMBL
Match: A0A5D3D753 (Putative PGPS/D10 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00180 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17
Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 8  KTESSKMGALPEYDMEELKKTPNLLLSPTALSRFS-----KSNCLCSPTTHIGSFRCRRH 67
          KT +SK  A+ E + ++LKK  +LL+SPTALSR +     KSNCLCSPTTHIGSFRCRRH
Sbjct: 16 KTPTSK-SAMVETEFDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRH 75

Query: 68 RSSAMTRGGSVGSNLSDLARNSD 86
          RS+AM+RG SVGSNLSDL + S+
Sbjct: 76 RSTAMSRGASVGSNLSDLGQKSE 97

[Close]

BLAST of PI0019721 vs. ExPASy TrEMBL
Match: A0A151S4K4 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028449 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.7e-13
Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 1  MEGRVEGKTESSKMGALPEYDMEELKKTPNLLLSPTALSRFSKS-----NCLCSPTTHIG 60
          ME +VE K    K+   PE D+E LKK  ++L+SPT+ S   K+     NCLCSPTTH+G
Sbjct: 1  MEPKVEQKPPKIKLSNSPEIDVETLKKNSHMLVSPTSQSITRKNSNGRLNCLCSPTTHVG 60

Query: 61 SFRCRRHRSSAMTRGGSVGSNLSDLARNSDDSASDSV 93
          SFRCR HRS+ M RG S+GSNL+ L   +  S SDS+
Sbjct: 61 SFRCRHHRSAVMRRGRSIGSNLAALGSEA-GSISDSL 96

[Close]

BLAST of PI0019721 vs. ExPASy TrEMBL
Match: A0A0A0K3W3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278200 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.2e-13
Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 16  ALPEYDMEELKKTPNLLLSPTALSRF-------SKSNCLCSPTTHIGSFRCRRHRSSAMT 75
           A  + ++E+LK+ P +L+SP+  S         +K+NCLCSPTTHIGSFRCR HR S M 
Sbjct: 33  AFTDLNLEDLKQNPRILVSPSPPSSIAARTPSSAKANCLCSPTTHIGSFRCRHHRHSGMI 92

Query: 76  RGGSVGSNLSDLAR 83
           RGGSVGSNLSDL R
Sbjct: 93  RGGSVGSNLSDLTR 106

[Close]

BLAST of PI0019721 vs. NCBI nr
Match: XP_022143490.1 (uncharacterized protein LOC111013367 [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 2.4e-19
Identity = 59/83 (71.08%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 8  KTESSKMGALPEYDMEELKKTP-NLLLSPTALSRFS-----KSNCLCSPTTHIGSFRCRR 67
          KT ++K  ALPE D++ELKK+  NL++SPTALSR S     KSNCLCSPTTHIGSFRCRR
Sbjct: 16 KTPTAK-SALPELDLDELKKSSHNLVMSPTALSRMSKSPSTKSNCLCSPTTHIGSFRCRR 75

Query: 68 HRSSAMTRGGSVGSNLSDLARNS 85
          HRS+A++RGGSVGSNLSDLA+ S
Sbjct: 76 HRSTAISRGGSVGSNLSDLAQKS 97

[Close]

BLAST of PI0019721 vs. NCBI nr
Match: KGN55991.1 (hypothetical protein Csa_011649 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 7.9e-18
Identity = 54/83 (65.06%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 8  KTESSKMGALPEYDMEELKKTPNLLLSPTALSRFS-----KSNCLCSPTTHIGSFRCRRH 67
          KT +SK  A+ E + ++LKK  NLL+SPTALSR +     KSNCLCSPTTHIGSFRCRRH
Sbjct: 16 KTPTSK-SAMVETEFDDLKKNANLLMSPTALSRMTKSRSIKSNCLCSPTTHIGSFRCRRH 75

Query: 68 RSSAMTRGGSVGSNLSDLARNSD 86
          RS++++RGGSVGSNLSDL + S+
Sbjct: 76 RSTSISRGGSVGSNLSDLVQKSE 97

[Close]

BLAST of PI0019721 vs. NCBI nr
Match: TYK19387.1 (putative PGPS/D10 protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 2.3e-17
Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 8  KTESSKMGALPEYDMEELKKTPNLLLSPTALSRFS-----KSNCLCSPTTHIGSFRCRRH 67
          KT +SK  A+ E + ++LKK  +LL+SPTALSR +     KSNCLCSPTTHIGSFRCRRH
Sbjct: 16 KTPTSK-SAMVETEFDDLKKNAHLLMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRH 75

Query: 68 RSSAMTRGGSVGSNLSDLARNSD 86
          RS+AM+RG SVGSNLSDL + S+
Sbjct: 76 RSTAMSRGASVGSNLSDLGQKSE 97

[Close]

BLAST of PI0019721 vs. NCBI nr
Match: XP_020232817.1 (uncharacterized protein LOC109813106 [Cajanus cajan])

HSP 1 Score: 85.1 bits (209), Expect = 3.4e-13
Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 1   MEGRVEGKTESSKMGALPEYDMEELKKTPNLLLSPTALSRFSKS-----NCLCSPTTHIG 60
           ME +VE K    K+   PE D+E LKK  ++L+SPT+ S   K+     NCLCSPTTH+G
Sbjct: 15  MEPKVEQKPPKIKLSNSPEIDVETLKKNSHMLVSPTSQSITRKNSNGRLNCLCSPTTHVG 74

Query: 61  SFRCRRHRSSAMTRGGSVGSNLSDLARNSDDSASDSV 93
           SFRCR HRS+ M RG S+GSNL+ L   +  S SDS+
Sbjct: 75  SFRCRHHRSAVMRRGRSIGSNLAALGSEA-GSISDSL 110

[Close]

BLAST of PI0019721 vs. NCBI nr
Match: KYP49765.1 (hypothetical protein KK1_028449 [Cajanus cajan])

HSP 1 Score: 85.1 bits (209), Expect = 3.4e-13
Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 1  MEGRVEGKTESSKMGALPEYDMEELKKTPNLLLSPTALSRFSKS-----NCLCSPTTHIG 60
          ME +VE K    K+   PE D+E LKK  ++L+SPT+ S   K+     NCLCSPTTH+G
Sbjct: 1  MEPKVEQKPPKIKLSNSPEIDVETLKKNSHMLVSPTSQSITRKNSNGRLNCLCSPTTHVG 60

Query: 61 SFRCRRHRSSAMTRGGSVGSNLSDLARNSDDSASDSV 93
          SFRCR HRS+ M RG S+GSNL+ L   +  S SDS+
Sbjct: 61 SFRCRHHRSAVMRRGRSIGSNLAALGSEA-GSISDSL 96

[Close]

BLAST of PI0019721 vs. TAIR 10
Match: AT5G55980.1 (serine-rich protein-related )

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-10
Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 0


Query: 28  TPNLLLSPTALSRFSKSNCLCSPTTHIGSFRCRRHRSSAMTRGGSVGSNLSDLARNSDDS 87
           +P+L    ++  + ++ NCLCSPTTH GSFRCR HR  ++TR GS+GSNL+ L  +    
Sbjct: 46  SPSLKRWRSSSGKSTRLNCLCSPTTHAGSFRCRYHRVDSLTRAGSIGSNLAVLLSSKSSR 105

Query: 88  ASDSV 93
            SDS+
Sbjct: 106 FSDSL 110

[Close]

BLAST of PI0019721 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 43  KSNCLCSPTTHIGSFRCRRHRSSA---MTRGGSVGSNLSDLARNSDDS 88
           + NCLC+PTTH GSFRCR HR +A   M+RG SV SNLS LA    +S
Sbjct: 62  RQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSNLSMLAGGDSNS 109

[Close]

BLAST of PI0019721 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 2.8e-05
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 42 SKSNCLCSPTTHIGSFRCRRHRSSAMTRGGSV-GSNLSDLARNSDDSAS 90
          +K+NCLCSPTTH GSFRCR HRS ++ R  S+  ++L D      DS S
Sbjct: 40 TKTNCLCSPTTHPGSFRCRIHRSLSLQRTKSIEAASLLDSPPKPADSPS 88

[Close]

BLAST of PI0019721 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 45.4 bits (106), Expect = 2.8e-05
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 42 SKSNCLCSPTTHIGSFRCRRHRSSAMTRGGSV-GSNLSDLARNSDDSAS 90
          +K+NCLCSPTTH GSFRCR HRS ++ R  S+  ++L D      DS S
Sbjct: 40 TKTNCLCSPTTHPGSFRCRIHRSLSLQRTKSIEAASLLDSPPKPADSPS 88

[Close]

BLAST of PI0019721 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related )

HSP 1 Score: 44.7 bits (104), Expect = 4.8e-05
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 0


Query: 39 SRFSKSNCLCSPTTHIGSFRCRRHRSSAMTRGGS 73
          +R  K+ C+C+PT H GSFRCR HRSSA + G +
Sbjct: 58 NRLGKTVCICAPTKHEGSFRCRLHRSSATSHGAA 91

The following BLAST results are available for this feature:

BLAST of PI0019721 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNY2	1.2e-19	71.08	uncharacterized protein LOC111013367 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0L7C7	3.8e-18	65.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045050 PE=4 SV=1	[more]
A0A5D3D753	1.1e-17	65.06	Putative PGPS/D10 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A151S4K4	1.7e-13	51.55	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028449 PE=4 SV=1	[more]
A0A0A0K3W3	2.2e-13	58.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278200 PE=4 SV=1	[more]

BLAST of PI0019721 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143490.1	2.4e-19	71.08	uncharacterized protein LOC111013367 [Momordica charantia]	[more]
KGN55991.1	7.9e-18	65.06	hypothetical protein Csa_011649 [Cucumis sativus]	[more]
TYK19387.1	2.3e-17	65.06	putative PGPS/D10 protein [Cucumis melo var. makuwa]	[more]
XP_020232817.1	3.4e-13	51.55	uncharacterized protein LOC109813106 [Cajanus cajan]	[more]
KYP49765.1	3.4e-13	51.55	hypothetical protein KK1_028449 [Cajanus cajan]	[more]

BLAST of PI0019721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55980.1	4.9e-10	47.69	serine-rich protein-related	[more]
AT3G13227.1	3.0e-07	60.42	serine-rich protein-related	[more]
AT1G67910.1	2.8e-05	53.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67910.2	2.8e-05	53.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G56500.1	4.8e-05	55.88	serine-rich protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..92
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 27..91
None	No IPR available	PANTHER	PTHR33132:SF73	SERINE-RICH PROTEIN-LIKE PROTEIN	coord: 27..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019721.1	PI0019721.1	mRNA