PI0019532 (gene) Melon (PI 482460) v1

Overview


Name	PI0019532
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	zinc finger homeobox protein 4-like isoform X1
Location	chr03: 2386319 .. 2387523 (+)
RNA-Seq Expression	PI0019532
Synteny	PI0019532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTTGTCGTTGATTTCATTTGGGATATTGGAATCAGAAATTTCAATATTTGGAAACCATTGATAAATTGACCCACCAGAATCAAGCTCTGGTAGAGGTCAGTTCTTCTTCTTTTTTTGTCTTTTATAGCAAATTTTATTTACTTTTGATGCTATTATCTTCTTCTCTGCTTTTGTTTATTTTATTAAATTTTATTTTTCACTTAAACACAACAGGACGTTAAAGCTATGAAGCAACGTTTTGTTCGTCTGAAAACTATCAATTCGGAGTTGAAGGCCAAGAAGCAAGAGGTTCCTATGATTCTTGGTGGTTCCATTAACCAATCAAAACTTCCAGAAATTGGGGCCTCAAGTTCGGGTACGAAATCCTCAGACCCAAATGTGGAGAATAAGCACGATGAATGTGAACCGTCGATGAAGAATCAGACGGCTCCTATGGCAGAACAGAGTAACGATAATCAGAATTACCAAATTCCAATTGGGGAAATTCCTTTACATGACCCTTCACTGGAACCAATGGGGATTCCTGATTTGAACCTACCATTGGAACAACTTATTCAGAAGAATTTCACAAGACATTTGGCTGCCACAGCAAGACGTAACAGGATTCGGATCAGGAAGAACAAGAAGAACAACAGCAATGGACCTGCAAATTAACAATCCTAATTCCATAATTTATTTTTAAACCTAAGGATTCAATCAATCAATTTTATGGGAGAACTGTTTTGAATCTTGGGGTAGTTTTTTTTTCCCCCTTTATTAATTGGGATACTCAAATTGTGAAGGTAGATAGAATCCCAAAGTATTTATCTGGATATATATTTTTTAGTTTTTTGTTAGGTTATTTTTTATTTATTACTTTTCTTTTTTGAGCTATTTGGATGGAGTGTTATTTTGTTGTTGAGA

mRNA sequence

TTCTTTGTCGTTGATTTCATTTGGGATATTGGAATCAGAAATTTCAATATTTGGAAACCATTGATAAATTGACCCACCAGAATCAAGCTCTGGTAGAGGACGTTAAAGCTATGAAGCAACGTTTTGTTCGTCTGAAAACTATCAATTCGGAGTTGAAGGCCAAGAAGCAAGAGGTTCCTATGATTCTTGGTGGTTCCATTAACCAATCAAAACTTCCAGAAATTGGGGCCTCAAGTTCGGGTACGAAATCCTCAGACCCAAATGTGGAGAATAAGCACGATGAATGTGAACCGTCGATGAAGAATCAGACGGCTCCTATGGCAGAACAGAGTAACGATAATCAGAATTACCAAATTCCAATTGGGGAAATTCCTTTACATGACCCTTCACTGGAACCAATGGGGATTCCTGATTTGAACCTACCATTGGAACAACTTATTCAGAAGAATTTCACAAGACATTTGGCTGCCACAGCAAGACGTAACAGGATTCGGATCAGGAAGAACAAGAAGAACAACAGCAATGGACCTGCAAATTAACAATCCTAATTCCATAATTTATTTTTAAACCTAAGGATTCAATCAATCAATTTTATGGGAGAACTGTTTTGAATCTTGGGGTAGTTTTTTTTTCCCCCTTTATTAATTGGGATACTCAAATTGTGAAGGTAGATAGAATCCCAAAGTATTTATCTGGATATATATTTTTTAGTTTTTTGTTAGGTTATTTTTTATTTATTACTTTTCTTTTTTGAGCTATTTGGATGGAGTGTTATTTTGTTGTTGAGA

Coding sequence (CDS)

ATGAAGCAACGTTTTGTTCGTCTGAAAACTATCAATTCGGAGTTGAAGGCCAAGAAGCAAGAGGTTCCTATGATTCTTGGTGGTTCCATTAACCAATCAAAACTTCCAGAAATTGGGGCCTCAAGTTCGGGTACGAAATCCTCAGACCCAAATGTGGAGAATAAGCACGATGAATGTGAACCGTCGATGAAGAATCAGACGGCTCCTATGGCAGAACAGAGTAACGATAATCAGAATTACCAAATTCCAATTGGGGAAATTCCTTTACATGACCCTTCACTGGAACCAATGGGGATTCCTGATTTGAACCTACCATTGGAACAACTTATTCAGAAGAATTTCACAAGACATTTGGCTGCCACAGCAAGACGTAACAGGATTCGGATCAGGAAGAACAAGAAGAACAACAGCAATGGACCTGCAAATTAA

Protein sequence

MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSSGTKSSDPNVENKHDECEPSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQKNFTRHLAATARRNRIRIRKNKKNNSNGPAN

Homology

[Close]

BLAST of PI0019532 vs. ExPASy TrEMBL
Match: A0A5A7VA15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004980 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.6e-47
Identity = 109/143 (76.22%), Postives = 122/143 (85.31%), Query Frame = 0


Query: 1   MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSSGTKSSDPNVENKHDECE 60
           MKQ FV LKTINSELKAKKQEVPMILGGS NQS++PEIG SSSGTKSS  NVEN   EC+
Sbjct: 140 MKQHFVHLKTINSELKAKKQEVPMILGGSTNQSEIPEIGTSSSGTKSSHSNVENNLHECQ 199

Query: 61  PSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQKNFTRHLAA 120
           PSMKNQTAP+AEQSN NQN+QIP GEIPL    L+PMGIPDLNL +EQ +Q N+T+++AA
Sbjct: 200 PSMKNQTAPVAEQSNHNQNHQIPTGEIPL----LDPMGIPDLNLTIEQNVQMNYTKYMAA 259

Query: 121 TARRNRIRIRKNKK-NNSNGPAN 143
            AR+NRIRI KNKK NNSNGPAN
Sbjct: 260 KARQNRIRIWKNKKNNNSNGPAN 278

[Close]

BLAST of PI0019532 vs. ExPASy TrEMBL
Match: A0A1S3BC34 (uncharacterized protein LOC103488048 OS=Cucumis melo OX=3656 GN=LOC103488048 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.6e-47
Identity = 109/143 (76.22%), Postives = 122/143 (85.31%), Query Frame = 0


Query: 1   MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSSGTKSSDPNVENKHDECE 60
           MKQ FV LKTINSELKAKKQEVPMILGGS NQS++PEIG SSSGTKSS  NVEN   EC+
Sbjct: 140 MKQHFVHLKTINSELKAKKQEVPMILGGSTNQSEIPEIGTSSSGTKSSHSNVENNLHECQ 199

Query: 61  PSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQKNFTRHLAA 120
           PSMKNQTAP+AEQSN NQN+QIP GEIPL    L+PMGIPDLNL +EQ +Q N+T+++AA
Sbjct: 200 PSMKNQTAPVAEQSNHNQNHQIPTGEIPL----LDPMGIPDLNLTIEQNVQMNYTKYMAA 259

Query: 121 TARRNRIRIRKNKK-NNSNGPAN 143
            AR+NRIRI KNKK NNSNGPAN
Sbjct: 260 KARQNRIRIWKNKKNNNSNGPAN 278

[Close]

BLAST of PI0019532 vs. ExPASy TrEMBL
Match: A0A0A0LRP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368820 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.6e-39
Identity = 97/146 (66.44%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 1   MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSS--------GTKSSDPNV 60
           MK+ F+ LKTINSELKAKKQE   ILGG  N S  P+ G S+S          KSSD NV
Sbjct: 150 MKRHFINLKTINSELKAKKQE---ILGGFSNLSVNPKFGTSTSVAMEIAKLTVKSSDSNV 209

Query: 61  ENKHDECEPSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQK 120
           EN HDECEPSMKNQT P+AEQSN  QNYQIPIG IPL+DPSL PMGIPDLNL LE ++ K
Sbjct: 210 ENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGGIPLYDPSLGPMGIPDLNLSLEDILHK 269

Query: 121 NFTRHLAATARRNRIRIRKNKKNNSN 139
           N+T++LAA AR+NRI+I KNK NN+N
Sbjct: 270 NYTKYLAAKARQNRIQIWKNKNNNNN 292

[Close]

BLAST of PI0019532 vs. ExPASy TrEMBL
Match: A0A0A0LL74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368810 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.3e-38
Identity = 98/153 (64.05%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 2   KQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSSGTKSSDPNVENKHDECEP 61
           KQRF   KTINSELKAKKQE  MILGGS N+S++PE G S+SGTKSSD N+EN   ECEP
Sbjct: 144 KQRFAHPKTINSELKAKKQEASMILGGSTNRSEIPENGTSTSGTKSSDLNMENNLHECEP 203

Query: 62  SMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQKNFTRHLAAT 121
           S KNQTAPMAEQSNDNQN+QIPI EIPL    L+ MGIPDLNL +EQ  + N+ + LAA 
Sbjct: 204 STKNQTAPMAEQSNDNQNHQIPIDEIPL----LDLMGIPDLNLTVEQNCRVNYKKQLAAK 263

Query: 122 ARRNRIRI------------RKNKKNNSNGPAN 143
           AR+NR RI            ++NK+NN NGPAN
Sbjct: 264 ARQNRARICKNKRNKKNKRNKRNKRNNGNGPAN 292

[Close]

BLAST of PI0019532 vs. ExPASy TrEMBL
Match: A0A5A7VHE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004970 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.1e-38
Identity = 97/147 (65.99%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 1   MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSS--------GTKSSDPNV 60
           MK+ F+ LKTINSELKAKKQE   IL G  N S  PEIG SSS          KSS  NV
Sbjct: 150 MKRHFINLKTINSELKAKKQE---ILDGFGNVSVNPEIGTSSSVAMEVAKLTVKSSYSNV 209

Query: 61  ENKHDECEPSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQK 120
           EN HDECEPSMKNQT P AEQ N N+NYQIPIG IPL+DPSL PMGIPDLNL LE +  K
Sbjct: 210 ENNHDECEPSMKNQTVPTAEQGNSNRNYQIPIGGIPLYDPSLGPMGIPDLNLSLEDIFHK 269

Query: 121 NFTRHLAATARRNRIRIRKNKKNNSNG 140
           ++T++LAA AR+NRI+I KNK NN+NG
Sbjct: 270 SYTKYLAARARQNRIQIWKNKNNNNNG 293

[Close]

BLAST of PI0019532 vs. NCBI nr
Match: XP_008444812.1 (PREDICTED: uncharacterized protein LOC103488048 [Cucumis melo] >KAA0065162.1 uncharacterized protein E6C27_scaffold82G004980 [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 9.5e-47
Identity = 109/143 (76.22%), Postives = 122/143 (85.31%), Query Frame = 0


Query: 1   MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSSGTKSSDPNVENKHDECE 60
           MKQ FV LKTINSELKAKKQEVPMILGGS NQS++PEIG SSSGTKSS  NVEN   EC+
Sbjct: 140 MKQHFVHLKTINSELKAKKQEVPMILGGSTNQSEIPEIGTSSSGTKSSHSNVENNLHECQ 199

Query: 61  PSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQKNFTRHLAA 120
           PSMKNQTAP+AEQSN NQN+QIP GEIPL    L+PMGIPDLNL +EQ +Q N+T+++AA
Sbjct: 200 PSMKNQTAPVAEQSNHNQNHQIPTGEIPL----LDPMGIPDLNLTIEQNVQMNYTKYMAA 259

Query: 121 TARRNRIRIRKNKK-NNSNGPAN 143
            AR+NRIRI KNKK NNSNGPAN
Sbjct: 260 KARQNRIRIWKNKKNNNSNGPAN 278

[Close]

BLAST of PI0019532 vs. NCBI nr
Match: XP_011649664.1 (myocardin-related transcription factor A [Cucumis sativus] >KGN62681.1 hypothetical protein Csa_022065 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 9.5e-39
Identity = 97/146 (66.44%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 1   MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSS--------GTKSSDPNV 60
           MK+ F+ LKTINSELKAKKQE   ILGG  N S  P+ G S+S          KSSD NV
Sbjct: 150 MKRHFINLKTINSELKAKKQE---ILGGFSNLSVNPKFGTSTSVAMEIAKLTVKSSDSNV 209

Query: 61  ENKHDECEPSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQK 120
           EN HDECEPSMKNQT P+AEQSN  QNYQIPIG IPL+DPSL PMGIPDLNL LE ++ K
Sbjct: 210 ENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGGIPLYDPSLGPMGIPDLNLSLEDILHK 269

Query: 121 NFTRHLAATARRNRIRIRKNKKNNSN 139
           N+T++LAA AR+NRI+I KNK NN+N
Sbjct: 270 NYTKYLAAKARQNRIQIWKNKNNNNN 292

[Close]

BLAST of PI0019532 vs. NCBI nr
Match: XP_011649663.1 (uncharacterized protein LOC105434650 [Cucumis sativus] >KGN62680.1 hypothetical protein Csa_022360 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 4.7e-38
Identity = 98/153 (64.05%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 2   KQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSSGTKSSDPNVENKHDECEP 61
           KQRF   KTINSELKAKKQE  MILGGS N+S++PE G S+SGTKSSD N+EN   ECEP
Sbjct: 144 KQRFAHPKTINSELKAKKQEASMILGGSTNRSEIPENGTSTSGTKSSDLNMENNLHECEP 203

Query: 62  SMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQKNFTRHLAAT 121
           S KNQTAPMAEQSNDNQN+QIPI EIPL    L+ MGIPDLNL +EQ  + N+ + LAA 
Sbjct: 204 STKNQTAPMAEQSNDNQNHQIPIDEIPL----LDLMGIPDLNLTVEQNCRVNYKKQLAAK 263

Query: 122 ARRNRIRI------------RKNKKNNSNGPAN 143
           AR+NR RI            ++NK+NN NGPAN
Sbjct: 264 ARQNRARICKNKRNKKNKRNKRNKRNNGNGPAN 292

[Close]

BLAST of PI0019532 vs. NCBI nr
Match: XP_008444813.1 (PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo] >KAA0065161.1 uncharacterized protein E6C27_scaffold82G004970 [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-37
Identity = 97/147 (65.99%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 1   MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASSS--------GTKSSDPNV 60
           MK+ F+ LKTINSELKAKKQE   IL G  N S  PEIG SSS          KSS  NV
Sbjct: 150 MKRHFINLKTINSELKAKKQE---ILDGFGNVSVNPEIGTSSSVAMEVAKLTVKSSYSNV 209

Query: 61  ENKHDECEPSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQK 120
           EN HDECEPSMKNQT P AEQ N N+NYQIPIG IPL+DPSL PMGIPDLNL LE +  K
Sbjct: 210 ENNHDECEPSMKNQTVPTAEQGNSNRNYQIPIGGIPLYDPSLGPMGIPDLNLSLEDIFHK 269

Query: 121 NFTRHLAATARRNRIRIRKNKKNNSNG 140
           ++T++LAA AR+NRI+I KNK NN+NG
Sbjct: 270 SYTKYLAARARQNRIQIWKNKNNNNNG 293

[Close]

BLAST of PI0019532 vs. NCBI nr
Match: XP_038886209.1 (uncharacterized protein LOC120076447 [Benincasa hispida])

HSP 1 Score: 121.3 bits (303), Expect = 6.6e-24
Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 1   MKQRFVRLKTINSELKAKKQEVPMILGGSINQSKLPEIGASS--------SGTKSSDPNV 60
           MKQ +  LK INSELKAKKQE  MI+GGS  QS++PEIG S+           +SS  N+
Sbjct: 1   MKQHYNHLKAINSELKAKKQE--MIVGGSNYQSEIPEIGTSTLVAMEIAKLTMESSASNL 60

Query: 61  ENKHDECEPSMKNQTAPMAEQSNDNQNYQIPIGEIPLHDPSLEPMGIPDLNLPLEQLIQK 120
           E    +CEPS+KNQTA M EQS    N++IP G IPL+D S+ PMGIPDLN   ++L ++
Sbjct: 61  EIDLHQCEPSIKNQTASMEEQS----NFEIPNGGIPLYDHSMGPMGIPDLNFSFDELSER 120

Query: 121 NFTRHLAATARRNRIRIRKNKKNNSNGPAN 143
            +++++AA AR+ R++I KNK NN+N  A+
Sbjct: 121 YYSKYMAAKARQKRMQICKNKNNNNNNGAS 144

The following BLAST results are available for this feature:

BLAST of PI0019532 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VA15	4.6e-47	76.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BC34	4.6e-47	76.22	uncharacterized protein LOC103488048 OS=Cucumis melo OX=3656 GN=LOC103488048 PE=...	[more]
A0A0A0LRP1	4.6e-39	66.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368820 PE=4 SV=1	[more]
A0A0A0LL74	2.3e-38	64.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368810 PE=4 SV=1	[more]
A0A5A7VHE1	5.1e-38	65.99	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0019532 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444812.1	9.5e-47	76.22	PREDICTED: uncharacterized protein LOC103488048 [Cucumis melo] >KAA0065162.1 unc...	[more]
XP_011649664.1	9.5e-39	66.44	myocardin-related transcription factor A [Cucumis sativus] >KGN62681.1 hypotheti...	[more]
XP_011649663.1	4.7e-38	64.05	uncharacterized protein LOC105434650 [Cucumis sativus] >KGN62680.1 hypothetical ...	[more]
XP_008444813.1	1.1e-37	65.99	PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo] >KAA0065161.1 unc...	[more]
XP_038886209.1	6.6e-24	50.67	uncharacterized protein LOC120076447 [Benincasa hispida]	[more]

BLAST of PI0019532 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..49
None	No IPR available	PANTHER	PTHR37614	OS02G0121400 PROTEIN	coord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019532.1	PI0019532.1	mRNA