PI0019504 (gene) Melon (PI 482460) v1

Overview


Name	PI0019504
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ubiquitin-like domain-containing protein
Location	chr04: 30049137 .. 30051845 (-)
RNA-Seq Expression	PI0019504
Synteny	PI0019504

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCGACGGCGTTTGTACACTTGACGTTGTTGACTTTACTCCCCCGCCCTCGACGACCCTCGAGAAGCATCGTAGATCCTTCTCGTTGCTTTCATCTCCTTTCATGATTGTTGGCCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCCGCCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTGTTTCGGTAATTTTTTTTCTGTGGCTGTTTTTTAATAATGTGGATTAAATTTAATTCGATTTGGGGTAATTTGTGGTAGTTTGTGATGATGCTGGAGAAATGGAGATTATTTTCTGCTCGTGAGTTTTGTTTGGTTTTATTTAGGGCAGAGATATTGACGGTTTTGAAATGGTTTTATTTGATCACAGAAAGTGAGAAAACTGATTTCTTAAATTTGAAGAATAAGAATGTCTTCGTTTGCAACCTCTTTTAATATAGGAGGACTTCAATGAATTGAGATGTTTGACACAGATATTCAAGTTAAGAGATCGGCTACTGTTGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGAACGGACCGGGAAGATTTCGTGGTTGGTACATTTAATTATTTTACCATTTAATTTTAAGAATGAGATTGATTACTTTTATCTGCTGTCAGATCCTATTGTGAATTTGTTTATTTATCAATGCTGGGCCAAAACTATATGCACGACATTTTGATGATATGTTGAAAGTTTGAAGGACATGCTTAATAGAATAGAACTACTTATCTGCTCTAAATTATCAACTTCCTAAGACTTTGTCTACCTTATTCTTAACTTAACAAGAAAAACTTAATCTGGATATCTTTTCACTTTGACACAAAAGTTTATAGAAGAGTACTTCTTAATTGAAATGTTTCCTGTTCTTGTTTGATTCATGGAGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTAGTTGATGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGGTATGTAGTTTGTTGTATAGTAGTAGTTTATGTTGTCTTTTGTGTGAATGATTTCATTTTCCTGTGATGTTGGATCACTAGATTTCAACATGACATAAATCAGAGCATTGTTTCATTGAAGATCAATTCAAGTTTCTTTAAATGAGTAACTGTTTCGTTGCTTATTACATTTGATTCTTGATGCATTATTTGTGAATCTAGTTACCGTCAGGAATGTGTTTCCAGGATGTTAATGAAATATGAAAAGAAAGAGTATAAAATTACCCAACTTTAAGCTTATGTTAATTGGATTTCCCTGTTTTAACATGTTCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAGGAAACGTGTGGTTTCCTCAAAACTGATCAGTAGGTAAGACTCTTATCTCTTAAATAGTGATCCTTGATGGGGAAAAACTGTATTGACGCAAAAATAGACAGGGACTTGAGCATTAAAAAAAATTTCAAAAGCTTGAGACGACAAAAAACGTCCATTTTGAAATGGGTAAAATATGCTGTTAGAAATTTTGGGTATTGTATTGAACTAAGAAATGTTAAATAACATAAGATTTTTCTTGAAATTTTCTTATTATTCAATAAGTCTCTTGAAAGACAATTTGGGTCATTGGATCTTACCGCTTGTCCAAGATCAGTTAGTGACTATTAGATCTTTCACATTATCCAAGGTCAATTTGTAACCATTAGATCCTCCACGTTCTTTAAGGTTAATTTCAAGTCATTGGATTTGCTTGATGGCTAAGTTTCTTTGTGCTATAAATAGGTGGATACACATGGTTTCCAAATCATCCCAAAATCTCTTTAATGATCACCTATAGGTGCTTGAGGTTTCTCCTTATTTCATTTATTCAATGAAACGTTTCTACTCTAAAAAAAAACCATCCTAAAATCTCAAATTAAGTGTGTTATTCCTCTGTAAGAAATTTCAAATAGAGAAAGTTTATTCTAACAATAGATTTTGTTATTCCTCTACAAGAAAGAAAGTTTGTAACTCCTATTTTAATTTGTATAGTGCATTTCATCTATTTTTCCTGTAATTTTTACCCTAACTTGTTTAGGAGTTGCCACATAAAATCATTGGGTTATTCTCTCCCTTTTACTTCATTATTGTTCTTAACCTATTGTAGTTGCAATCTTACTCTATTCAGTCACAGTCATTTTCACAACAAGAAATATTATAAGATATCCATTCCTTTAGTGATTTATTAATCTAATTAATGTACTTTTACATTGCTATCGTCTCACCGATCTCTTATTTCCAATTACCAATCTGTTCTGCTTACTATAGAATTCTAATCAACTTCTCAGGATATCCTCTCGATCAAAAAGCTACAAGCAAAATGATCAGGAAGATATGGAAAGATACAACTACAACGACATAGAAAGTGGAAGGTTTCGACATAATGGCAACAATGATCTGTTCATGAACCATGAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCCGCAGGAAAGATGAGCATCAAGAGCCTGGTACGTCCATCGGTAACTCGCCCTAGTTTGGTGCGTGGTTTCAAGAATTTAATACAATTATGCCGCGAAAAACAACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTCTGA

mRNA sequence

ATGGCTGTCGACGGCGTTTGTACACTTGACGTTGTTGACTTTACTCCCCCGCCCTCGACGACCCTCGAGAAGCATCGTAGATCCTTCTCGTTGCTTTCATCTCCTTTCATGATTGTTGGCCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCCGCCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTGTTTCGATATTCAAGTTAAGAGATCGGCTACTGTTGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGAACGGACCGGGAAGATTTCGTGGTTGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTAGTTGATGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAGGAAACGTGTGGTTTCCTCAAAACTGATCAGTAGGATATCCTCTCGATCAAAAAGCTACAAGCAAAATGATCAGGAAGATATGGAAAGATACAACTACAACGACATAGAAAGTGGAAGGTTTCGACATAATGGCAACAATGATCTGTTCATGAACCATGAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCCGCAGGAAAGATGAGCATCAAGAGCCTGGTACGTCCATCGGTAACTCGCCCTAGTTTGGTGCGTGGTTTCAAGAATTTAATACAATTATGCCGCGAAAAACAACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTCTGA

Coding sequence (CDS)

ATGGCTGTCGACGGCGTTTGTACACTTGACGTTGTTGACTTTACTCCCCCGCCCTCGACGACCCTCGAGAAGCATCGTAGATCCTTCTCGTTGCTTTCATCTCCTTTCATGATTGTTGGCCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCCGCCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTGTTTCGATATTCAAGTTAAGAGATCGGCTACTGTTGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGAACGGACCGGGAAGATTTCGTGGTTGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTAGTTGATGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAGGAAACGTGTGGTTTCCTCAAAACTGATCAGTAGGATATCCTCTCGATCAAAAAGCTACAAGCAAAATGATCAGGAAGATATGGAAAGATACAACTACAACGACATAGAAAGTGGAAGGTTTCGACATAATGGCAACAATGATCTGTTCATGAACCATGAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCCGCAGGAAAGATGAGCATCAAGAGCCTGGTACGTCCATCGGTAACTCGCCCTAGTTTGGTGCGTGGTTTCAAGAATTTAATACAATTATGCCGCGAAAAACAACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTCTGA

Protein sequence

MAVDGVCTLDVVDFTPPPSTTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLSVLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQEDMERYNYNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRPSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV

Homology

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BLAST of PI0019504 vs. ExPASy Swiss-Prot
Match: Q84WS8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 56  LMLSVLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPG-RFRGWLHVWWHFCLCY 115
           + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G R   W HVW +FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 116 AGQKLVDDADYIASFGIKDGDQLQFVRHV 144
             +KL+DD   +   GI++  Q+ F+ +V
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

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BLAST of PI0019504 vs. ExPASy Swiss-Prot
Match: Q9BV90 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-06
Identity = 27/87 (31.03%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 56  LMLSVLKLDGSCFDIQVKRSATVAELKGAVE-LVFSHMPQNGPGRFRGWLHVWWHFCLCY 115
           + + V K+DG    + V +SATV +LK A++  V     + G  +   W +VW  + L  
Sbjct: 41  MTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTS 100

Query: 116 AGQKLVDDADYIASFGIKDGDQLQFVR 142
           AG+KL +D   +  +GI++ D++ F++
Sbjct: 101 AGEKLTEDRKKLRDYGIRNRDEVSFIK 127

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BLAST of PI0019504 vs. ExPASy Swiss-Prot
Match: Q3ZBQ4 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-06
Identity = 26/87 (29.89%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 56  LMLSVLKLDGSCFDIQVKRSATVAELKGAVE-LVFSHMPQNGPGRFRGWLHVWWHFCLCY 115
           + + V K+DG    + V ++ATV +LK A++  V     + G  +   W +VW  + L  
Sbjct: 32  MTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTS 91

Query: 116 AGQKLVDDADYIASFGIKDGDQLQFVR 142
           AG+KL +D   +  +GI++ D++ F++
Sbjct: 92  AGEKLTEDRKKLRDYGIRNRDEVSFIK 118

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BLAST of PI0019504 vs. ExPASy Swiss-Prot
Match: Q8VIK1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-06
Identity = 26/87 (29.89%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 56  LMLSVLKLDGSCFDIQVKRSATVAELKGAVE-LVFSHMPQNGPGRFRGWLHVWWHFCLCY 115
           + + V K+DG    + V ++ATV +LK A++  V     + G  +   W +VW  + L  
Sbjct: 32  MTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTS 91

Query: 116 AGQKLVDDADYIASFGIKDGDQLQFVR 142
           AG+KL +D   +  +GI++ D++ F++
Sbjct: 92  AGEKLTEDRKKLRDYGIRNRDEVSFIK 118

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BLAST of PI0019504 vs. ExPASy TrEMBL
Match: A0A0A0LH97 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877630 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.6e-136
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPSTTL-EKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLS 60
           MAVDGVC LDVVDF P  STT  EKHRRSFSLLSSP MIVGLSRKNVLYRQLPH PLMLS
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKL 120
           VLKLDGS FDIQV+RSATVAELKGAVELVFSHMPQ+GPG+   WLHVWWHFCLCYAGQKL
Sbjct: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKI-SWLHVWWHFCLCYAGQKL 120

Query: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQ 180
           VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQS+K VVSSKLISRISSRSKS+KQNDQ
Sbjct: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQ 180

Query: 181 EDMERYNYNDIESGRFRHNG--NNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240
           +DMERYNYNDIESGR +H+G  NNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR
Sbjct: 181 KDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV 276
           PSVTRPSLVRGFKNLIQLCREK+HYEKVNKKKRSIIGV
Sbjct: 241 PSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of PI0019504 vs. ExPASy TrEMBL
Match: A0A5A7T9I3 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003750 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.0e-135
Identity = 251/278 (90.29%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPS-TTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLS 60
           MAVDGVCTLDVVDF PP S TT EKHRRSFSLLSSP MIVGLSRKNVLYRQLPH PLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKL 120
           VLKLDGSCFDIQV+RSATVAELKGAVELVFSHMPQNGPG+   WLHVWWHFCLCY GQKL
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKI-SWLHVWWHFCLCYDGQKL 120

Query: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQ 180
           +DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQS+KR VSSKLISRISSRSKS+KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 EDMERYN--YNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240
           +DMERYN  YNDIESGR +HNGNNDLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLVR
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNNDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV 276
           PSVTRPSLV G KNLIQLCREK+HYEKVNKKKRSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of PI0019504 vs. ExPASy TrEMBL
Match: A0A5D3E6G8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007520 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 250/278 (89.93%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPS-TTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLS 60
           MAVDGVCTLDVVDF PP S TT EKHRRSFSLLSSP MIVGLSRKNVLYRQLPH PLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKL 120
           VLKLDGSCFDIQV+RSATVAELKGAVELVFSHMPQNGPG+   WLHVWWHFCLCY GQKL
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKI-SWLHVWWHFCLCYDGQKL 120

Query: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQ 180
           +DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQS+KR VSSKLISRISSRSKS+KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 EDMERYN--YNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240
           +DMERYN  YNDIESGR +HNGN+DLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLVR
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV 276
           PSVTRPSLV G KNLIQLCREK+HYEKVNKKKRSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of PI0019504 vs. ExPASy TrEMBL
Match: A0A1S3CR65 (uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 250/278 (89.93%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPS-TTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLS 60
           MAVDGVCTLDVVDF PP S TT EKHRRSFSLLSSP MIVGLSRKNVLYRQLPH PLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKL 120
           VLKLDGSCFDIQV+RSATVAELKGAVELVFSHMPQNGPG+   WLHVWWHFCLCY GQKL
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKI-SWLHVWWHFCLCYDGQKL 120

Query: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQ 180
           +DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQS+KR VSSKLISRISSRSKS+KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 EDMERYN--YNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240
           +DMERYN  YNDIESGR +HNGN+DLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLVR
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV 276
           PSVTRPSLV G KNLIQLCREK+HYEKVNKKKRSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of PI0019504 vs. ExPASy TrEMBL
Match: A0A6J1FBK4 (uncharacterized protein LOC111442589 OS=Cucurbita moschata OX=3662 GN=LOC111442589 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 7.4e-118
Identity = 223/272 (81.99%), Postives = 240/272 (88.24%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPSTTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLSV 60
           MAVDG   LD    +PPP TT+EK+RRS SLLSSP MIVGLS+KNVLYRQLPH PLMLSV
Sbjct: 1   MAVDGFGKLDAA-HSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSV 60

Query: 61  LKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKLV 120
           LKLDGSCFDIQVKRSATVAELKGAVE VFSHMPQNGPG+   WLHVWW+FCLCYAGQKLV
Sbjct: 61  LKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKI-SWLHVWWYFCLCYAGQKLV 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQE 180
           DD DYIA+FGIKDGDQLQFVRHVTTGYNV+RKQS+K VVSSKL+SRISSRSKSYKQND+E
Sbjct: 121 DDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKE 180

Query: 181 DMERYNYNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRPSV 240
           DMERY YND ESGRF+H+GNN      EPK+V+FLGGWFSHTK AS GK SI SL RPS 
Sbjct: 181 DMERY-YNDAESGRFQHHGNN------EPKVVLFLGGWFSHTKQASTGKRSINSLARPSG 240

Query: 241 TRPSLVRGFKNLIQLCREKQHYEKVNKKKRSI 273
           +RPSLVRGFKNLIQLCREK+HYEKVNK KRSI
Sbjct: 241 SRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI 263

[Close]

BLAST of PI0019504 vs. NCBI nr
Match: XP_038899214.1 (uncharacterized protein LOC120086568 [Benincasa hispida])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 247/278 (88.85%), Postives = 260/278 (93.53%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDF---TPPPSTTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLM 60
           MA+DGVCTLDVV+F    PPP TT+EKHRRSFSLLSSP MIVGLSRKNVLYRQLPH PLM
Sbjct: 1   MAIDGVCTLDVVEFPPPPPPPPTTVEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQ 120
           LSVLKLDGSCFDIQVKRSATVAELKGAVE VFSHMPQNGPG+   WLHVWWHFCLCYAGQ
Sbjct: 61  LSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKI-SWLHVWWHFCLCYAGQ 120

Query: 121 KLVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQN 180
           KLVDDADYIA+FGIKDGDQLQFVRHVTTGYN IRKQS+K VVSSKL+SRIS RSK+Y+QN
Sbjct: 121 KLVDDADYIANFGIKDGDQLQFVRHVTTGYNAIRKQSKKCVVSSKLLSRISYRSKNYEQN 180

Query: 181 DQEDMERYNYNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240
           DQEDMERYNYNDIESGRF+H+GNN+LFMNHEPKMVVFLGGWFSHTKLASAGK  I SLVR
Sbjct: 181 DQEDMERYNYNDIESGRFQHHGNNELFMNHEPKMVVFLGGWFSHTKLASAGKTRINSLVR 240

Query: 241 PSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV 276
           PS TRPSLVRGFKNLIQLCREK+HYEKVNKKKRSIIGV
Sbjct: 241 PSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of PI0019504 vs. NCBI nr
Match: XP_004136480.1 (uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical protein Csa_001701 [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 3.3e-136
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPSTTL-EKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLS 60
           MAVDGVC LDVVDF P  STT  EKHRRSFSLLSSP MIVGLSRKNVLYRQLPH PLMLS
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKL 120
           VLKLDGS FDIQV+RSATVAELKGAVELVFSHMPQ+GPG+   WLHVWWHFCLCYAGQKL
Sbjct: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKI-SWLHVWWHFCLCYAGQKL 120

Query: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQ 180
           VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQS+K VVSSKLISRISSRSKS+KQNDQ
Sbjct: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQ 180

Query: 181 EDMERYNYNDIESGRFRHNG--NNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240
           +DMERYNYNDIESGR +H+G  NNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR
Sbjct: 181 KDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV 276
           PSVTRPSLVRGFKNLIQLCREK+HYEKVNKKKRSIIGV
Sbjct: 241 PSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of PI0019504 vs. NCBI nr
Match: KAA0038816.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 491.1 bits (1263), Expect = 6.2e-135
Identity = 251/278 (90.29%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPS-TTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLS 60
           MAVDGVCTLDVVDF PP S TT EKHRRSFSLLSSP MIVGLSRKNVLYRQLPH PLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKL 120
           VLKLDGSCFDIQV+RSATVAELKGAVELVFSHMPQNGPG+   WLHVWWHFCLCY GQKL
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKI-SWLHVWWHFCLCYDGQKL 120

Query: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQ 180
           +DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQS+KR VSSKLISRISSRSKS+KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 EDMERYN--YNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240
           +DMERYN  YNDIESGR +HNGNNDLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLVR
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNNDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV 276
           PSVTRPSLV G KNLIQLCREK+HYEKVNKKKRSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of PI0019504 vs. NCBI nr
Match: XP_008466420.1 (PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 489.2 bits (1258), Expect = 2.3e-134
Identity = 250/278 (89.93%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPS-TTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLS 60
           MAVDGVCTLDVVDF PP S TT EKHRRSFSLLSSP MIVGLSRKNVLYRQLPH PLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKL 120
           VLKLDGSCFDIQV+RSATVAELKGAVELVFSHMPQNGPG+   WLHVWWHFCLCY GQKL
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKI-SWLHVWWHFCLCYDGQKL 120

Query: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQ 180
           +DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQS+KR VSSKLISRISSRSKS+KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 EDMERYN--YNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240
           +DMERYN  YNDIESGR +HNGN+DLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLVR
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PSVTRPSLVRGFKNLIQLCREKQHYEKVNKKKRSIIGV 276
           PSVTRPSLV G KNLIQLCREK+HYEKVNKKKRSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of PI0019504 vs. NCBI nr
Match: XP_022935765.1 (uncharacterized protein LOC111442589 [Cucurbita moschata])

HSP 1 Score: 433.3 bits (1113), Expect = 1.5e-117
Identity = 223/272 (81.99%), Postives = 240/272 (88.24%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFTPPPSTTLEKHRRSFSLLSSPFMIVGLSRKNVLYRQLPHPPLMLSV 60
           MAVDG   LD    +PPP TT+EK+RRS SLLSSP MIVGLS+KNVLYRQLPH PLMLSV
Sbjct: 1   MAVDGFGKLDAA-HSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSV 60

Query: 61  LKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKLV 120
           LKLDGSCFDIQVKRSATVAELKGAVE VFSHMPQNGPG+   WLHVWW+FCLCYAGQKLV
Sbjct: 61  LKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKI-SWLHVWWYFCLCYAGQKLV 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSKLISRISSRSKSYKQNDQE 180
           DD DYIA+FGIKDGDQLQFVRHVTTGYNV+RKQS+K VVSSKL+SRISSRSKSYKQND+E
Sbjct: 121 DDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKE 180

Query: 181 DMERYNYNDIESGRFRHNGNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRPSV 240
           DMERY YND ESGRF+H+GNN      EPK+V+FLGGWFSHTK AS GK SI SL RPS 
Sbjct: 181 DMERY-YNDAESGRFQHHGNN------EPKVVLFLGGWFSHTKQASTGKRSINSLARPSG 240

Query: 241 TRPSLVRGFKNLIQLCREKQHYEKVNKKKRSI 273
           +RPSLVRGFKNLIQLCREK+HYEKVNK KRSI
Sbjct: 241 SRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI 263

[Close]

BLAST of PI0019504 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 4.0e-31
Identity = 72/162 (44.44%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 26  RRSFSLLSSPFMIV-GLSRKNVL-YRQLPHPPLMLSVLKLDGSCFDIQVKRSATVAELKG 85
           RRS +   SP  ++ GL R+    Y Q+P  P+ L+VLKLDGS F IQV ++ATV ELK 
Sbjct: 6   RRSLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVGELKM 65

Query: 86  AVELVFSHMPQNGPGRFRGWLHVWWHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHV 145
           AVE  FSH+P +GPG+   W HVW  FCL Y  ++L+++++Y+  FGIKDGDQL+F+RH+
Sbjct: 66  AVEAAFSHLPISGPGKI-SWPHVWGQFCLSYEDKRLINESEYLTEFGIKDGDQLRFIRHI 125

Query: 146 TTGYNVIRKQSRK--RVVSSKLISRISSRSKSYKQNDQEDME 184
           +    ++ K   K  RV S K +   S+  ++ K+N   ++E
Sbjct: 126 SNYCMLMVKHKSKTPRVSSFKQLKLFSTTPETRKKNVIREVE 166

[Close]

BLAST of PI0019504 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 4.9e-29
Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 43  RKNVLYRQLPHPPLMLSVLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRG 102
           R+   Y +LP+ P+ LSVLKLDGS FD+ V  SATV +LK A+E  FSH+P+ GP +   
Sbjct: 6   RRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKI-S 65

Query: 103 WLHVWWHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSK 162
           W HVW HFCLC+ GQKL+ D D I ++G+KDGD+++F  HV+   N +  +   R    K
Sbjct: 66  WSHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSG--NAVLSKGYSRKSKQK 125

Query: 163 LISRISSRSKSYKQNDQEDMERYNYNDIESG 194
            + R+  +      N  E+++  +++D+E G
Sbjct: 126 NLERVLPKDGDEVLNRIEEIDD-SWDDLERG 152

[Close]

BLAST of PI0019504 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 2.5e-25
Identity = 60/135 (44.44%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 51  LPHPPLMLSVLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRGWLHVWWHF 110
           +P  P+ L+VLKLDGS F   V ++ATV ELK AVE  FSH+P +GPG+   W HVW  F
Sbjct: 1   MPEEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKI-SWPHVWGQF 60

Query: 111 CLCYAGQKLVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRK--RVVSSKLISRIS 170
           CL Y  ++L+++++Y+  FGIKDGDQL+F+RH++    ++ K   K  RV S K +   S
Sbjct: 61  CLSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSKTPRVSSFKQLKLFS 120

Query: 171 SRSKSYKQNDQEDME 184
           +  ++ K+N   ++E
Sbjct: 121 TTPETRKKNVIREVE 131

[Close]

BLAST of PI0019504 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-22
Identity = 64/180 (35.56%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 43  RKNVLYRQLPHPPLMLSVLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPGRFRG 102
           R++   +  P   + LSV+KL+GS FD++V +  +VAELK AVE VF+  P  G G    
Sbjct: 40  RRSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGMI-S 99

Query: 103 WLHVWWHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSRKRVVSSK 162
           W HVW HFCLCY  Q+LV+D   I   G+ DGDQL FVRH++  ++ + K+S+       
Sbjct: 100 WSHVWGHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLSIDHSPMNKRSKSPSCKRY 159

Query: 163 LISRISSRSKSYKQNDQEDMERYNYNDIESGRFR-HNGNNDLFMNHEPKMVVFLGGWFSH 222
           L   +SS     +  +Q      N N ++    + + G  D     E ++V  + GW  +
Sbjct: 160 LELDVSSIVNEIQIQNQ------NQNGVDDVAEKCYPGAQDELPAAESRLVNLIKGWLPY 212

[Close]

BLAST of PI0019504 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 9.2e-12
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 56  LMLSVLKLDGSCFDIQVKRSATVAELKGAVELVFSHMPQNGPG-RFRGWLHVWWHFCLCY 115
           + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G R   W HVW +FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 116 AGQKLVDDADYIASFGIKDGDQLQFVRHV 144
             +KL+DD   +   GI++  Q+ F+ +V
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

The following BLAST results are available for this feature:

BLAST of PI0019504 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WS8	1.3e-10	39.33	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana O...	[more]
Q9BV90	2.5e-06	31.03	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 G...	[more]
Q3ZBQ4	4.3e-06	29.89	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=...	[more]
Q8VIK1	4.3e-06	29.89	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 ...	[more]

BLAST of PI0019504 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH97	1.6e-136	91.01	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877...	[more]
A0A5A7T9I3	3.0e-135	90.29	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A5D3E6G8	1.1e-134	89.93	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A1S3CR65	1.1e-134	89.93	uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=...	[more]
A0A6J1FBK4	7.4e-118	81.99	uncharacterized protein LOC111442589 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]

BLAST of PI0019504 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899214.1	1.1e-136	88.85	uncharacterized protein LOC120086568 [Benincasa hispida]	[more]
XP_004136480.1	3.3e-136	91.01	uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical ...	[more]
KAA0038816.1	6.2e-135	90.29	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. m...	[more]
XP_008466420.1	2.3e-134	89.93	PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U...	[more]
XP_022935765.1	1.5e-117	81.99	uncharacterized protein LOC111442589 [Cucurbita moschata]	[more]

BLAST of PI0019504 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32270.1	4.0e-31	44.44	Ubiquitin-like superfamily protein	[more]
AT5G25340.1	4.9e-29	42.38	Ubiquitin-like superfamily protein	[more]
AT4G32270.2	2.5e-25	44.44	Ubiquitin-like superfamily protein	[more]
AT1G80060.1	1.2e-22	35.56	Ubiquitin-like superfamily protein	[more]
AT3G07860.1	9.2e-12	39.33	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 54..148 e-value: 4.9E-30 score: 105.3
None	No IPR available	PANTHER	PTHR14942:SF2	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 15..266
IPR040610	SNRNP25, ubiquitin-like domain	PFAM	PF18036	Ubiquitin_4	coord: 58..143 e-value: 7.7E-23 score: 80.4
IPR040610	SNRNP25, ubiquitin-like domain	CDD	cd17058	Ubl_SNRNP25	coord: 56..142 e-value: 4.27577E-30 score: 106.834
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein	PANTHER	PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	coord: 15..266
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 52..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019504.1	PI0019504.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex