PI0019459 (gene) Melon (PI 482460) v1

Overview


Name	PI0019459
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DNA-directed RNA polymerase
Location	chr06: 27734781 .. 27752151 (+)
RNA-Seq Expression	PI0019459
Synteny	PI0019459

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCTGCCGAAGACTTTCGACCAGGCCAGAAGGTATAGTTTTCAAGGCGATATTGCAGTTGAGCCTTGAACCTGTAGTTCTAGAGTTGAATCATCCCTTTAACTCGTATTGTATCCAACAACTCATTGTTTATTTCTATTATATAAATTTTCCACTTATATCCCTTCTTCCAGTTGAAGGCTTTCGTTAAATGTTATTGCTGTGACTGCTTTATTATTATTATTTTTTTGGCATCGGTTCCTGACCAACATCTCTCCATGCTTTCCTTCTAAGTTATTGTGGTGACTACTTTCTTTTGGGTTCCGGTTCCTGACCAACATCTCTTGACGCTTTCTTTCATGATTTAGATGCAATATAGTTTAAATAATTTATTTCAAATGCACTAGGTGATGATCCATATGGAAGATGAACAGGATGGCGAGCTACCAATTCCATCTGGTCTCCTTACTGGCGTAAACTTTAGTGTCTCAAATCAGCAAGATATAGTAAGTATTTTAATTTTGATTTATAAACCTCATATACTACTTTAGGAAGTAAATAATTTTCAAGAACAATCTCTTATTATATGTGTATATGGATAAAGTTCAGGGCCAGGGTTTGTTTTTGTTTGTAATGGATTCTTGCGTTGGGTACACTAGGGTTTTTAAAATTTGGAATAACTTGGATGTCTGTGTAATTAACACGGTATTGATTACCTTGACCGCTACCGCTTTGTGTAGTTTGCCTCCTTTTTGTGGGCTTTATTTTCTAGCTGTCTGAGTATTCTTTCATTTTTCCTCAATAAAAGTTCAATCACTCATTCAAAAAGAAGAACCACTTCTTTTGTCATGGAGGACTGGGGATCTTTTCAACAAAGTAACAATGCCTTACTACTGAAATGACTTTGGAGATTCACTCAAGAAGAGTATCTCTAGGGAAGAACGTTTTTTCTAGCACGGTCATAGTGTGTGTGTATATATATATAGGTAGAAAAAATACCCAATCACATCTCTCCTTAGGTTTATATTTAGTTGGTGTCACATTTGCTCAGAGATGACAACAAACTTCTATTTAATTCCAACATTTTGGTTGGGAAGCAATGTTGTAGCAAGATCTTGACCCACATAGGGTCTCAGCTCAAGCACAATCAACTCTCTAAATCATAAGATTAACAATGAAAAACAAAATTTAGTTATTGGAAGGTGAACACTTGTCTTGTTCTTCTTTTTCCCCTACATTTATCTTAATTTTTATTCTATTAATGTTTGTAAGGAAAATAAATTTTTTATTTTTGTTTCATATATAAAAAGTATTGTTCTTGGATAAAAAACTGAAGGTGACTTAAACTTGTGAGTTTATATGTGCCTTTAATTTTGTATAGTGTTGTGTTGCTATACAGGATTTGACTTTTAATATTCTGATGTGAAAATAATTTTTATTGATGTAACAGGAGAATATAGCGGTAATAACAGTTGATGCAGCCAGCGAGGTATCTGATCCTAAGTTGGGACTTCCAAATCCATCTTATCAGTGCACCACATGTGGTGCTAGCTCTCTAAAATTTTGTGAAGGTAATTAACTAGTCATGTTACAAAAGTGTTACTTGTTTTCTTTCACACATGGCTGCGTACTAACATTTTTGTTTGAATGGTTTTGGAAGGTCATTTTGGGGTTATCAAATTCCCATATACTATAATCCATCCTTATTTTCTCTCGGAAGTTGCACAAGTGTTGAATAAAGTTTGTCCAGGGTGTAAATCTATCAGGCAGGAACTATGGGGCAAGGTCAGGTACCTCACTTATTGTGATGAACCTTGAATTATTGTAATTAGTTTAAAAGTTATGGCTTTTTGCTATTAAACGACACAGTTATCTTGCCTATTTGGATATGTAGATTCTCACAGAAAAATGCAGTTTCTTCTTTCCGTCCATGTTTTGAGGAAAATTCTTTGAATTATGATTCAATTGAAGAAAGATTTACAGGGCTTTTAGTACCCTCCGATCAGAATTTCGCCTCACCACTCTCCCCTTCACTTATCTTTCCCCTCCAGAACCATTTTGTCTTCACTCCTTTGGATCCAACTTAGGTTTAACAAGAGTAGTTATTCACTTGACAGAGGAATAAGGATTTTCATGAGAACCCTTTAGAAGGATGTGGATCCCAAATATGAACATCCGTTCTCCTAGTATTGTAATGTAAGTCCCCGATCATTGATGATGTCCAATGTCTCCCTATTAGATAAAGCACGTCTAAAACCCAATGAAGGGGAAGACAATGACTTAGACAACATTGCTACAACAAAATGATTCCTCATTGCAGACAACTAATACATTTGAGGGAATAAAGAGCAGAGCAGTCTTATCCCCCAATGACTTATCCTCTTAGAAAAACGTGTCTGTCTGCCCCAACCTAGTTATGAAAGAGAGAGAATAAAGATACTCCTTTGCGATACCTCTCAATGATTTCTGGAAGTGTCTTTGACCCCACTCAACGTCCATTCAAAAGGGGATGACCTAGACTTGCTCACAATTGTACTCGATAATTCGGAGAATAATATTTCTTCTTATCGAGAATAAGAGTAAAGTTACAAATATATATAGAGTACGTAGAAACTCTAGACCCTATGTAAAATTACATTAATGAACATGTATAATATAAATATAAACATATATCATAACACTCCCCCTCAAGCTGAAGCAAATATGTCAATCATGCCTAGCTTGTTGCACAGATAGCTTATCCTTGCTCCATTTACAGTTTTAGTAAGAATATCCCCCAATTGTTTTTCAGTCTTCACATATCCTGTGGACACCAACCTTTCTTGGATCTTCTCACGAATGAAGTGACAATCCACCTCAATATGTATAGTTCGTTCATGAAATACCGGATTAGATGCAATGTGGAGTGCAGCTTGATTATCACACCATAGTTTAGCTGGCACTGTAATACCGAAGCCTATCTCAGATAATAGTTGTTGTATCCATACTATCTCGCACACAGATTGTGCCATAGCCCTATATTCTGACTCAGCACTCGAACGAGAAACAACATTTTGTTTCTTACTCTTCCATGATACCAAGTTTCCACCCACAAAGACACAATATCTAGAGGTCGATCTCCTATCCTCTCGAGATCCAGCCCAATCAGCATTAGAAAAACATTCGACTCTCGTATGTCCATGATTTTTATATAAGATTCCACGTCCAGGAGCAATTTTCAGATAACAAAGGATATGTTCTACTGCAACCCAATGATCCACTGTAGGAGAAGACATGAACTGACTAACAACACTTACAAAATAAGCAATATCTGGTCGAGTCACAGTTAGATAGTTCAACTTTCCAACTAGCCTCCTGTATCTCTCAGAATCTTTACATAATTCTCCTTCTTTAGCAAGTTGTTGATTCGGTATCATCGGAGTACTACTTGGTTTGACTCCTAGCTTTCTTGTCTCAAATAATAAATCAAGTACATATTTTTGTTGAGATAAATAAATGTTTTTCTGCTTCTCATCACTTCAATACCCAAAAATATTTCAATGGTCCCAAATCTTTCGTATGAAATTGACCCTGAAGGAAAGTTTTGAGAGATGAAATACCCGACGTATTATTTCCAGTAATGACAATATCATCAATATACACAACAAGTAAAATAATACCATTATCAGATCGTTGATAAAAAACAGAATGATCAGATGTATTCTTCTGCATTCCAAAGCGTACGAGAGCTTGACTAAACTTACCAAACCACGCACGTGGACTCTGTTTCAGATCATACAAAGATTTTCAAAGGCGACATACTCTATCACTCTCCCCATGAGCAACAAACCTAGGTGGTTGCTCCATATAAACTTCCTCCTGAAGATTACCATGCAGAAAAACATTCTTGATGTCAAGTTGATGCAAAGGCCAATTATGTGTAGCAGCCATGGAAAGAAAAAGGCGGATGGATGTTAATTTGGCAACTGGAGAAAAGGTGTCTGAATAATCAGTTCCGTAGATTTGTGCATAACCTTTGGCAACAAGACGAGCTTTCAACCGAGCCATTGTTCCATCAGGATTGACCTTGACAGCAAACACCCATTTACAACCAATGACCTTCTTTCCTGCAGGAAGAGATACTAAATCCCAAGTACCATTATCATCTAATGCAGTCATCTCCTCAATCATCGCCTGTCGCCAGCTAGAATGAGATAAAGCTTCATGAACAGTGTTAGGAACAGAGATGGAATCAACAGATGTAACAAAAGCATATGAAGGAGGAGACAACTGATGATAGGAAACAAAGGAAGAAACAGGGTAAGTACATTTGCGTTCACCTTTTCGAAGAGCAATGGGAAGATCATCACTTGGTACCGGGTTGCATGATGAAGAAGGCATTGGTGGAGGACTTGAATCTGGAGGACATGAGTCTAAAGGATGCGGTGGAGGTCGTCGGGAGTAGACTCGAGAAAGCAACGAATGGGACGGAGGCGCAACAGAGGAAGATGGAGTCGATGATGAGGTGGGGGAGGTAACCTCATTTATAAACTGATTGTCATCCTCCCCTTGCCACGGACTCGATGTGATGAAATAAAGGGAACATCCTCACAAAACGAAACATTAGGAGAAACAAGATAGCGGTTAAGGGTAGGACAATAACAACGATACCCCTTTTGAACACGTGAATAACCCAAGAAGATGCATTTCAAGGATTTTGGATCTAACTTAGTATGATGAGGACGAATGTCTCGAACAAAACAAACACAACCAAATATTTTAGGATCAATAGGAAACAAAGACTTGGTAGGAAAAAGAACATGATAAGGAATATCACCATTAAAAATAGAGGAAGGCATCCTATTAATCAAAAAACAAGCAGTGGAAACAGCATCCGCCCAAAACGGTTTCGGAACATGCATTTGAAACGATAAAGCACGTGCAGTTTCAAGTAAGTGTCTATTTTTCTGTTCAGCCACACCATTTTGAGATGGAGTGTCAGCACAAGAAGATTGATGAAGAATGCCATGTTCAGACAAGTAAGAACCAAGAACATGAGAAAAATATTCACCAGCATTATCAGTGCGCAAAGTTTCGAGAGAGGCATTAAACTGATTTTTTATTTCAGCATGAAAAGCACAAAAGTGAGAAAATAACTCAGAAAGATTTTTCATTAATATAACCAGGTTAGACGAGAATAATTGTCAACAAAAGTAACAAAATAACGAAAACCTGTTTGAGACATAACAGGACACGAACCCCAAATATCAGAATGAACTAACTCAAATGGAGCACTAGCTCGTTTATTGACTCAAGGACTCGAACTAAGACGATGAAATTTAGCAAATTGACACGAATCACAATGCAAAGAGGACAAAGACCGAAATTCGGGATAAAGCTTCTTCAACACAAACAATGATGGATGACCTAAACGACAATGGACTTCAAATGGAGATGGGACTACAGGACACGCCACACCTTGCGGTACTTGATCAAAGAGATAAAGGCCTCCCGACTCATATCCTTTACCAATAATCTTCTTCGTCACACGATCCTAAAACAAGCAATAACCACGAAAGAACAAGACAACACAATTAAGGTCGTGAGTAAGTTGGCTAATAGAAATTAAATTAAAGGATAAGTTAGGTAAATGTAACATAGAAGACAAAGAAAAGGATGGAGTAAGGTGAATGGTGCCAGAGCCAAGAACGTAGGATGTGGAGCCATCTGCCAATGTGACAAATGGAAACGGGGCAGGGGACAATTTGTTAGGAAATAAGCGAGAATTACCTGTCATATGGGCGGTGGCACCAGAGTCTACGACCCATTTGGTAGAGGATGTAAGGAGACATTTTGTATTACCTGGGGCAACAGTGGATGCAACAGGAGTAGAGGAAGACGACGCTTGCAATGAATCTTGGTACATTTGAAACTTAGCAAACTCATCTGTAGAAGTAGTAACTGATGCCTTTGTCATCTCACCTGTGGAAGCTATCTGAGCATGCTGAGACCGTTGATTATTCTTATATAACAATTTTCGACAGTTACGTTTCATATGGCCTGGCTTACGACAATAGTTACAAATAATCCCTGTAGAATCTAGTTTCCGATGATCATAACTATTCTTCTGGAAGTTGCTATCCATCGCTCGAGGCACCCGGAGGTTATCGTTCTTGCTAATGAGAGCACTACTGGATTGAGGAATAGACACACTGGTCGAAGAACTCTCAAGGCGAAGAACACGGGTGAAAGCATCATCTAATGATGGAATCTTAGAGTCAGAGAGAATCCGTGCTTTAGCCATTCCAAATTCAGGTAAGAGTTCATTCAAAAAGATCATAACAGCCATCTTCTCCCGTTGAGCTTGTTGAACTTTAACATCGAGACTAAAGGGTAATAGCAAAGTAAGCTCGACACTTATCCTCTTGAGGTGCATAAAATAGTTGGTAACTGATTCTGCTTTTTGTTCAGCATGGAAAAACTGCATACACACTTCAAACATTCTATGTTCTTGCTCCTTACCAGAATATAGAAACTCTAGAAATTCTAAGAGTTCTTTAACAGACTCACAGTGATCAACTAATCCAATTACCTCACTCTCAATGGAGTTTTTGATTTGAAGATATAGTCGGGCATCATCACGGAGCCAATCCTTTTTCTCCTTTGCATCTTCTGGGGGATCCTCAGTCATATGATCATCCATATCAGTACTTCTCAAATAGAATAGAATTGTCCGATGCCAATCATAATAGTTAGATCCATTTAACTTATGTTCTGTGATTTTAGAGGCTAGGGGAATTACATTTGAAACTACCAAATTCTTGATGTCGGCCATACTGAAGGCACACACTGTAGTCCAACAAATAGAAGAAACAATCCAACCAGCTGCGAAATAAAAAAACAGTCACAAACTCGTTGTAGTCGTCACCCTTCGTCTAAACCGGACACTATTCGATGGAACTAACTTCATAAACTGGCCGAAAAAGAGAATCCGAGACAAGCCCAGAAGACAGCGGTCGAAACGGAATTCCCATGCGCTCTCACGCGCCAGCGCGTGGAGGATGTGGAGTTGGATTATAGTGGCACGTGAAGCTCACATGCGGTGTTTTCCGATGATCGGCGATGATAGATGGTGGCGAAACGTGGTGGCGCTTCTCATAAACCAGGCGGTGTCGACAAATGGCCACTCAACGCTGACCTAAACCTAAGCCCTAACGGAGAAGGAAACTACCAAATAAAATATTTTAATCCTAAAGGCTCTGATACCATGTACTCGATAATTCGAAGAATAATATTTCTTCTTATTGAGAATAAGAGTAAAGTTACAAATATATATAGAGTACGTAGAAACCCTAGACCCTATGTAAAATTATATTAATGGACATGTATAATATAAATATAAACATATATCATAACAACAATGACCTTATGGCAAGTCCTGGACACAAGCCATCATGGGAGCTCTCTCATTCATGTCTCAACACTATGGATAGATTTCAAAAACAATGTCCATGGATCGGTCTTTCTCCATCATGGTGCTGCCTTTACCGGAGGGAGAATGAGTCTCATAATCATTTGTTTATCAACCACACCTTTGTGGCTGTCATTCGGGCTGGATTTCTTGTTGCTTTCTAATGGACCCTTTTTCCTCCCAGTGACCCTAGAAGTTGGATGGACTTGCTGCTAAAGGAACATCCTTTCAAAGCTACTAAAGAACTTATATGGGCTTACATCATCATAGTTGTTTTCTGAAAGATTTGGGATGAAAGAAATGCTAGAACCTTCCAAGACAAAACCAAATCTTCCGAAGAAGTCCTAAGATGTGACTCGACTATGTTCAATGCTTATTTTGGTGTAAAATTTAACAACCATTAAGAGTTGTGATTTCTCTTACCTTATTACAAATTGGAAACATCTTTTGTATTCCCTTTAACTTGAACTCTTTTGTATACCTTTGATATTCCATCAATTAATGAAATAGTTTCTTATTAGAAAAACAAAGCCGTCAATTAATGAAATAGTTTCTTTTGTATACCTTTGATATTCTATCAATTAATGAAATAGTTTCTTATAAGAAAAACAAAGCCATTAAGGCCTTGTTGTGAGCTCTCATATTCCCTATCCCTAATCCCCCCAAAATCAAATTGGTTTGTTACTGTCTCTCACTCAATTACGTGAGTTCCTTTACTCTCCTCAACGCCCACCCAAACAAAATCTCCCAGAAACTTTTCCAAAGATTTACTCACTGAAACCAGGATCCTAAAAAGGGTTAAGAAATAGGTTGGCATTCCAATCTAAACAAACTAGTTTAGAATGAGGCTACCTCCCTTGGAGAAGAAACTTCTCTTCCAGGACACCAACTTTTTCCGAATCTTACTAATCACGGGTTCTCAAAACAGAAACACTATCCCATGAATGAAACCTCAAAGCCAAGAAGAATTTGCAGAAAAGGTCCTAACTCCCTACGAAGCTCCAAGAACATTCATATGACTAGAGGAAGGAGCAGCAAACCTTGAACCTCTTTGGAACATCTTCGATAGAAGACAAAAGGAGAAGGCTCCATTAAGAACACACCATAAGAATTAGCAACCAAGAAGTAGTTATCCACAAAATTAAGACTTTAGATCATATACTGATAACACCAAGCTATCTGGCCCATCTCTTGGAAAAAGACTCCGATCATTCATCAGACTTGAACTAATGTGCTCATTTCTGTGAAATTCTTTGAAATGTCTCGTAAAATCAGCCTTTAAAGTTTTAAAGACATGACTTAACAAAGAATTCAATAGTAAACCATCAATTGTAAGTCTCCATGGAAGTAAAAACTGAAAAGGATGAATGATTAGCTTGAATAGATGTAGAGTTGATTCAATGGTAAGTCTGCAACAGAAAAGTGAGAACTATTCTTATAGTAGTTTCCTCTTGGCGCATTTTATCTATACCCTTTTGTAGTTTGGCCAATCTTCCCTCTTTACTTCTCATGGAGAGAGTCTTTTGTAGCTTGAGTTGCTTGGCAATGCATCTTTCCCACAATCCCATTCAGAGTTTACATCTCTTTAATTGATGGAAGTTTGTTTCGTATCAGGAAAAGAAAATGACATTGTGCCATCGGAACTCTTCACCTTTTGAAATTTTTATCTGGGTTGGTTCAATATTGACTCACCATGGTCACATGTAACTGCCTAGTGGTGGTGGTGGTGGTAGCTTCCTGCATTTTTTTCCTAATCTAATCTAAGATTTCTTTTTGAACTTGTGTTTCGGTTCTCTTTACATGTACCAGGTTGAGGATCCAACATCTGATTACAATCGACCTAAAGGTTGCAGATATTGTTTTGTAAGTTTGTTTAGCTCACGTACTTATGTTTCATTCTTAACTGTTTATAAAAACTGTCCTGATGAAAAAGTTCCATTTCAAACCATGCTTTATGTGCTCAATAGGGAAGTCTAAAGGATTGGTATCCACCTATGAGGTTTAAGCTTTCAACTACTGATATGTTCAAAAAAAGTATGATTATGGTGGAAGTGAAAGAAAATATGTCGAAGAAATATCAAAAGAGGGTGGCTAAAGGAGGTTTGCCTTCAGATTATTGGGATTTTATCCCTAAAGATGAACAACAGGAAGAAAGTTACTGCAGACCAAACCGGAAAATCCTAACTCATGCTCAGGTATTGGGCCTGTTTATGCATCTGAGCCCTGACTAGATTTAGTTTTTGCAGGTTTTTCATCTATGTACATTTCCGTTCTCTCAATTTGTTTTCACTAGAAACGTTAAAAATCATTGTATTTCTTGATGACTATGAACCCCATGAAACCCTGATTTGTTTTATGTTGTTATAAGTATCTTCTCTTTTCTTACTAAAGAAAAAAACGAAAAAAAATTGAAATCAGAAACCCAACCATTAATGAAATGAACAATATTATAGTTCAAAGACAAAAATAAAGATCTGCTAGCAAGTGGGTTGGAGGTTTGTAGGAACCTAACACACTTATTTATTCATTTATGTTCTATAATCTAAAACGAGGAATGGAGGGAGAGAGAGAGTCCTAACACTTGCTACGGATAAATACTTAGCATGGTACATAAGCTCTATAACTTTAAAGATTATACAAATAATAGATTTCCTAGATTTTTACTTTGTTAGATCCTTTTTCTTAACTGGAGGTTTTGTGGCCTTGGGTTTTTATTTTTCTTTTTTTTGCATACCCTTGTATTCTATTATTTCATTTTTCTCAACGAAAGTAGTTAATTCCATAAAAAGAATAGATGTCCTGCCATCTAGTTCATGTCGTGTTGTGCTTTTCTCTTAAGATTTTGCCCTGCTTCTTCTTATGTCTGTCTTCTTTGATTTCAGGTTCATTATTTGTTGAAAGACATCGACCCAAAGTTTCTTAAAAAGTTTGTACCTGCAATAGATTCACTGTTTCTAAACTCTTTCCCTGTTACTCCGAACAGTCATCGTGTGACTGAAATGGCACATTCATTTTCAAATGGACAGCGTTTGATCTTTGTAAGACTTTTCTTCTTAATGCCCTGTTATTAGGTTGAGGTTATTCAAACAGAAGGATGTTTGAATGATATTTGCCTCTTTCTAACAGTTTGCTTTAAACATGTTTGATGATTTAAGGATGAAAGAACCAGGGCTTACAAGAAGGTGGTTGATTTTAGAGGGACAGCCAACGAGTTAGGTTCTCGTGTTCTCGATTGTCTCAAAATTTCAAAGGCAATTTACAATATCTTTGTCTTTTGCCTTAATCATGTTAATTATTATGTGAAACTTTTGCTCTTGCTTATATTGTCACTTCTTTTATGCAGCTTAGCCCAGAGAAGTTACAAAGTAAAGATTTGGTTTACCAGCAAAAAAAAATTAAGGATACTGCTACTAGCTCATCTGGTTTAAGATGGATCAAAGATGTTGTTCTTGGAAAGCGGAGCGACCACTGTTTCCGCATGGTTGTCGTTGGTGATCCAAACATTGAGTTAAGTGAAATTGGCATACCTTGTCATGTTGCGGAGAGATTGCAAATATCTGAACATCTGAGTTCTTGGAATATGAAGAAATTAAGTACTTCTTGTTACCTTCATCTTGTTGAAAAGGGAGAGATCTATGTTCGTCGTGAAGGTCGTCTGGTTCGTGTACGTAATGTTCTTGAACTTAACATGGGGGACACTATATATAGGCCCCTAGCTGATGGGGATGTTGTGCTGGTTAATAGACCACCATCCATACATCAGCACTCACTTATTGCTTTATCTGTCAAGCTTCTTCCTGTCTCTGCAGTTCTTTCCTTAAACCCACTCTGTTGTTCTCCTTTCCGTGGAGATTTTGACGGTGACTGCCTTCATGGCTATGTTCCTCAATCGTTGGAAGCCCGAGTGGAGGTTAGAGAGCTAGTTTCCCTAGATAGACAGCTAATTAATGGCCAAAGTGGTAGAAATCTGCTGTCACTTAGTCATGATAGTTTAACTGCTGCTCATTTAATTCTGGAAGATGGAGTTTCGTTCAATCTTTTCCAGATGCAGCAGTTGCAAATGCTCACTTTACATCAGTTGTTGCCTCCAGCAATTGTAAAATCCCCTTTGCTTAGAAATTGTGCTTGGACTGGGAAACAGTTATTCAGCATCCTCCTACCTCCTGATTTTGATTATTCTTCTCCTTCTCACAATGTTTTCATTGAGAAGGGAGAATTAATATCTTCAGAAGGATCTTACTGGCTTCGCGATAGTGGTAGAAACCTCTTCCAAGCGCTAATAGAACACTGTCAGGGCAAGACCCTTGATTACTTGCGTGATGCTCAAGGGGTTCTTTGTGAATGGTTATCGACGAGGGGCTTGAGCGTTTCATTGTCAGACTTGTACCTCTCTGTGGATTCATACTCTCACAAAAACATGATGGATGATATCTTTTGTGGGTTACAGGAAGCTGAGGAAACATGTAATTTAAAGCAGCTGATGGTGGATTCACATAAGGAGATCCTTACTGGAAATGACGAAGATAATCAACATTTGTTATCTATTGCAGTGGAGCGTTTAATTTATGAGAAGCAGAAATCTGCTGCTCTAAATCAAGCTTCTGTTGATGCTTTCAAGAAAGTTTTCCGGGATATACAAAATCTAGTTTACAAGTATTCTGGTAAAGACAATTCACTTCTTACTATGTTCAAGGCTGGAAGCAAGGGTAATCTGATGAAACTAGTTCAACATAGCATGTGTCTTGGCTTGCAACACTCTTTGGTTACTCTATCCTTTAGCCTTCCACATAAGCTCTCGTGTTCTGCATGGAACAGTCAGAAGATTCCTCGTTATATTCAGAAGGATGGTCTTCCTGACCGTACACAGTCTTTCATACCCTATGCTGTGGTTGAAAATTCCTTTCTCTCGGGGCTTAATCCTTTTGAGTGTTTTGCTCATTCGGTGACAAATCGAGATAGCTCTTTCAGTGACAATGCTGAAGTTCCTGGGACTTTGACACGAAAACTTACGTTTTTAATGCGGGATATATATACTGCATATGATGGAACAGTGAGGAATGCATATGGAAATCAGCTGGTTCAGTTTTGTTATGGCATTGATACACCTACTAGTGTCTCTAGTGAATCGGATAGTGAGAATAATAATAGGGATCGTGATGTAGGTGGTCATCCTGTTGGGTCATTGGCTGCTTGTGCTATCTCAGAAGCTGCATATAGTGCTTTGGACCAACCAATTAGTCTACTTGAAGCTTCGCCGTTACTAAACCTAAAGGTACTGTAGCCTTCTCCTCTCAATGTAACAATTTAAATCAAGGGTTTGGGAAATATGTGTTATTTTTATTATTCTATACTCCCTTTGTTGAATCATCAATTAGCTGATGGGTTCTGATAGATTTAATCTTATATCCGAAGACTATTGTAATGTCATTTATATCAATAACTACATTGGGCATCATGCAAATTTTAAGGCCACAAGTGTGGAAAAGCGTTAATGTTTTGAATAAAATTAAATTTACAGTAACCCATAAACCTAAGCTTTTGGGTTTGGTGTTGATTTAACCATTTGCAAATTACTTTTATGTTTTTTGCTACATGCTATATATGTATGTATTTATTTATCTTAAAACAATTTTTTAAAACTTTTCTTCCTTTTTACCCTAAGAAACTGTCTTTTTTTTAGTAGTAAAAAACTTTTCAAGCATAACTTCTAAACAGATCTCTAGTTTCTGATACCAAGACTAATGGTTGTGATATTTTTGACTTATGCAGCGAGTGCTGGAGTGTGGTTCAAAGAGGAATAGTATCAAACAAACCTTTTCATTGTTCTTATCAGAGAAACTTTCAAAACGAAGTTATGGATTTGAGTATGGAGCTCTAGGAGTTAAGAACCATTTAGAAAGAGTAATGTTTAAAGATATTGTGTCTAGTGTCATGATAACGTAAGTTGCTTTATTTTCAATGTTTTCTATATATGTCATTACCTGTGTTATGGTATCTTTTAATTGACATTACTAGCAATGTTTTCTATGGATATTAGCTTCTCCCCACAGCCCTCCCGGAAAAAGCATTTTAGTCCTTGGGTTTGCCACTTTCATGTATGCAAGGTAATGCAATCTGGAAACTGTCTTTCTTTATATATGAGCAAGGGTATAATGTTAAAGTCCTGTATCTGGTATCAAATATAATTTATCCATCCAGGAAATTTTGAAGAAAAGAAGATTGAAGATGAATTCTGTTATCCATTCCCTCAATATGCGGTGCGACTCTGTGAGACAAGAAGGAAGAATGAATTTGCCCTCTTTGCAAATAATAACCCAGTATGTTCCTTCTTTCATTGACATTTATAGTTGGTTCCCTTTCATTAAATATTCTCTAGTATGGGCTTTTCTATCAATTCATGTTAACCTTTGTAATCTCACTTGAGCTGTATGTTGTTTTGTGGCTGGCTGATAAGGGATTGTCCTCTAGCTGATTCACTGACAGAAGATGGTGATACAGTGTGCTTAACTGTTACAATAGCTGAAAACACAAAAAACTCTTTCCTGCAATTAGACTTCATTCAAGATTTGCTGATTCATTTCCTTCTTGGTACAGTTATAAGAGGTCTGTACACTGTTTGTCACCTTGCAATACTTAATGTGCAATGCCATACACACATGGCCAATTTGAATAGCTGATCTTTTGATTTGATAATATTTCATTATCTAAAACTTATCATTGGCGTCTGCTTTTTCTTGAATTTAGAGTTGAAGTCGCAATGTTTCAAAAATATCTTCAGTAATATGTTCCTTTAACATTTTCCCCAGAATATTGGGTATAATTGGTGTGCTTTAGTTCTGGGCACCTGCGTCATTCTATGTGTATAAGATACAAGTTAGGAGTTAGAGAAGATGTAGGGCCGTCAAATTTTGGGAAAAAAGGGCCTTATTTTGAGAATGCCTAAGACAAGGTTGATTGGTCACTTGAATTGAGCTCTAGATGGAGAATGTGGAAGAGTGTTTTCTTCTGCAAAGTCAAATTACTCTTTATCTGTTATTCCTGAGTTTGTCCAGCTCGAATGTTTTTCTATAATTCAAGTCCGGTGCCCCTTGTTAGCTTTGCATGCCTGCTTTTCGTGATGTTATTTGTTTTCTTTTCCTGAAGTTATAAAAAGAAAACATTTAATGTGCTATGCCTTATATTTGACAAGACTTAAATTATATTTGCATTAAAATTGCTAGGTTTCTCTTGATATGTAGCTGTTTCAACTGACGCAACTTTTTTGACATACCTATGGAGTGGGGACTTTTTAAGATAGTCTTTCATTTGCTTGAGTAAGTTATTTGTTGGCTAGATTTACCAAAAATTTATGTTTTCTTTTCCCTTGGCATTTGCATTAGGCTTTGCTGAGATTGACAGGGTAGACATCGCATGGAATGACCGGCCAAAGGTCCCAAAACCTTGTTGTAGTCATGGTGAGCTCTACTTGCGGGTGACCATGTCTGGAGAAGGAAATTCAAGATTTTGGGCAACTCTCATGAATAATTGCCTCCCTATAATGGATTTGATTGATTGGACTCGTAGTCATCCAGATAACACTCATAGTCTCTGTTTGGCGTACGGAATAGATTCTGGATGGAAGTACTTTCTCAACGTGTGTATTTCTGTCCACTACTCTTTTGACAAGTTTTGCTTGGTTCTTGCATCAGACCATTTGCAGGAACTTTTGCATGCTTCAATTCTAATCATTCAAATATCTTAATGCAGAGTTTGGAGTCTGCAACGTTGGATATTGGTAAAACAATACGTCTTGAACATTTGCTGCTTGTTGCAAATTCTCTTTCGGCTACAGGAGAATTTGTTGGCTTAAATGTGAAAGGACTGACACATCAAAGGGAACATGCTTTGGTCAAAACACCCTTTATGCAAGCTTGCTTCTCAGTTAGTCATCTAATTGCTAATTTTCATTTGAATCATCATATTGGGCCAGCAGTGAATGTAAGTAAATTAATTTCGTGGTTGGATTTCTGCAGAGTCCTGGCGCTTGTTTGGTTAAAGCTGCCAAGGCTGGAATCAAGGACAACCTGTCAGGAAGTTTAGATGCTTTGGCATGGGGGAGAATGCCTTCGCTGGGAACGGGGGGACAGTTCGATATCCTATATTCTGGGAAGGTGAGATTATATATTCCAACATCATATATAAAAACAAAATGTTTCAGCCCATAGATGCTTAAAAGACTAATAAAAGGTTTTTATGAATCTCCAAAGTGCAATTTCATTGATGTTTTCAGTTATTCTGTGTGCAATTCCATAGAATTATATCTGTAATTTGAAATAGGATTTAAGCTAACCAGTTCTCAAATATGTGGCAAATGAATTAACGATAATCTTAAGATGTTTGTCTTATTTTGTATTTCTGGGGATTTCTTCTCCTGCTAAGAGTCCACGATATAGGATTTTTGTTTTTCTACATACATGCATGCACGCATGTTATACTTAGCCATTAGTTTCAAATAATGGCACTTGTTTAAGTTTAGCGGGGTATTTCTTTTTCTTTTGTTATTAAAAATATCGTTAATGAATGTACATGTGTTTTTATCCCAAAAAATCAGAGTTCAAACTATGAGTGATAGTTAAAATGTATACTATATTATCTCAATCTAGATGCATGGAAATTTTCATTTCTACCAGTCTATTCAATGGTCACTGTGCCTGTTATATGTTGGTTCAGGTTTTTGCCGTATTTCAGCTATCTAATGGTTTCAATACTGTTCAGGGACACGAGCTTAATAAGCCTGTTGATGTTTATAATCTACTGGGTGGACAAAGCATTTGTGAGAAGCAGAACGCGAAGATTGAATCTCTTGATAAGAACAATATATCTGAGAAATATAGTGCTCAGTTAGTGCTTAAAAATGGAGGTTCTACCATTAAAGGACTTAAAAGGCTGGATAGTGTATCTAAATCAATTTTAAGGAAATTTTTGACACTGAACGATATTCAAAAGCTGTCGTTTGCATTGAGAACCATTTTACACAAGTTAGTTCTTCCTTCTTTGGCATTGCTCAGCTCTTACAATTGGCATTATATCAGATGTGTCCTTTTTTCTATTTGGACATTTTCTTTTATTTATTATTTCCCTTTTGGAAAGATAAAAAGAGAACACCCATCCATGTTCTAGCTTAATGAATAATTGCTTATTGCTTGAAAATCACTTACCTATTATCTTGGATTGTTATTTTTTTAAATTTCAAATGCTGCTGAAAATGCCATATGCACAATGAAGTTGGAGTTCTAAAAGGTTTCTCTTGTGTGTGTAGGTATTCTTTAAATGAAAGATTAAATGAAGTGGACAAATCAACTTTGATGATGGCTTTATACTTTCATCCTCATCGGGACGAAAAGATTGGTGTTGGAGCACAAGACATTAAGGTATTTTCTATAGAAGATGAAACTGTTTGGGGATATAAATCCCACTATCATTTTATATAAATTCCCTCCTAACTGTAACTTTGAAGTCAGAGTCTATTCTCTTATATAAATGGTAATATGCCTTCTTGTTTTGTGGGATCCTTAACTTTAAACAACTGACATATGGACTACCAACATGTTCTTATCCTTTTCTCAGTTAACTAGTGTTTTTGTCCTTAACCGTGGCTGTAAATATGTACCTGATGTCAATGCTGTTATTTTATTACCTGCTACCTGTTTAGTAAGGTGATAGATCTGATGTTTATTAGTGCGATTTATGTAATCACGTTTACCTGCTACCTGGTTGTTCTTTTGCAGGTTGGTAGCCACTCAAAGTATCAAAATACACGTTGCTTCGTATTGATACGATCGGATGGAACAACAGAAGATTTTTCATACCACAAGTGTGTTTTAGGTGCTTTGGAGATCATTGCTCCTCATAGAGTAAAGGGTTATCAGTCAAAATGGATGCAAGAAAAGTTTGAGTGA

mRNA sequence

ATGAGTTCTGCCGAAGACTTTCGACCAGGCCAGAAGGTGATGATCCATATGGAAGATGAACAGGATGGCGAGCTACCAATTCCATCTGGTCTCCTTACTGGCGTAAACTTTAGTGTCTCAAATCAGCAAGATATAGAGAATATAGCGGTAATAACAGTTGATGCAGCCAGCGAGGTATCTGATCCTAAGTTGGGACTTCCAAATCCATCTTATCAGTGCACCACATGTGGTGCTAGCTCTCTAAAATTTTGTGAAGGTCATTTTGGGGTTATCAAATTCCCATATACTATAATCCATCCTTATTTTCTCTCGGAAGTTGCACAAGTGTTGAATAAAGTTTGTCCAGGGTGTAAATCTATCAGGCAGGAACTATGGGGCAAGGTTGAGGATCCAACATCTGATTACAATCGACCTAAAGGTTGCAGATATTGTTTTGGAAGTCTAAAGGATTGGTATCCACCTATGAGGTTTAAGCTTTCAACTACTGATATGTTCAAAAAAAGTATGATTATGGTGGAAGTGAAAGAAAATATGTCGAAGAAATATCAAAAGAGGGTGGCTAAAGGAGGTTTGCCTTCAGATTATTGGGATTTTATCCCTAAAGATGAACAACAGGAAGAAAGTTACTGCAGACCAAACCGGAAAATCCTAACTCATGCTCAGGTTCATTATTTGTTGAAAGACATCGACCCAAAGTTTCTTAAAAAGTTTGTACCTGCAATAGATTCACTGTTTCTAAACTCTTTCCCTGTTACTCCGAACAGTCATCGTGTGACTGAAATGGCACATTCATTTTCAAATGGACAGCGTTTGATCTTTGATGAAAGAACCAGGGCTTACAAGAAGGTGGTTGATTTTAGAGGGACAGCCAACGAGTTAGGTTCTCGTGTTCTCGATTGTCTCAAAATTTCAAAGCTTAGCCCAGAGAAGTTACAAAGTAAAGATTTGGTTTACCAGCAAAAAAAAATTAAGGATACTGCTACTAGCTCATCTGGTTTAAGATGGATCAAAGATGTTGTTCTTGGAAAGCGGAGCGACCACTGTTTCCGCATGGTTGTCGTTGGTGATCCAAACATTGAGTTAAGTGAAATTGGCATACCTTGTCATGTTGCGGAGAGATTGCAAATATCTGAACATCTGAGTTCTTGGAATATGAAGAAATTAAGTACTTCTTGTTACCTTCATCTTGTTGAAAAGGGAGAGATCTATGTTCGTCGTGAAGGTCGTCTGGTTCGTGTACGTAATGTTCTTGAACTTAACATGGGGGACACTATATATAGGCCCCTAGCTGATGGGGATGTTGTGCTGGTTAATAGACCACCATCCATACATCAGCACTCACTTATTGCTTTATCTGTCAAGCTTCTTCCTGTCTCTGCAGTTCTTTCCTTAAACCCACTCTGTTGTTCTCCTTTCCGTGGAGATTTTGACGGTGACTGCCTTCATGGCTATGTTCCTCAATCGTTGGAAGCCCGAGTGGAGGTTAGAGAGCTAGTTTCCCTAGATAGACAGCTAATTAATGGCCAAAGTGGTAGAAATCTGCTGTCACTTAGTCATGATAGTTTAACTGCTGCTCATTTAATTCTGGAAGATGGAGTTTCGTTCAATCTTTTCCAGATGCAGCAGTTGCAAATGCTCACTTTACATCAGTTGTTGCCTCCAGCAATTGTAAAATCCCCTTTGCTTAGAAATTGTGCTTGGACTGGGAAACAGTTATTCAGCATCCTCCTACCTCCTGATTTTGATTATTCTTCTCCTTCTCACAATGTTTTCATTGAGAAGGGAGAATTAATATCTTCAGAAGGATCTTACTGGCTTCGCGATAGTGGTAGAAACCTCTTCCAAGCGCTAATAGAACACTGTCAGGGCAAGACCCTTGATTACTTGCGTGATGCTCAAGGGGTTCTTTGTGAATGGTTATCGACGAGGGGCTTGAGCGTTTCATTGTCAGACTTGTACCTCTCTGTGGATTCATACTCTCACAAAAACATGATGGATGATATCTTTTGTGGGTTACAGGAAGCTGAGGAAACATGTAATTTAAAGCAGCTGATGGTGGATTCACATAAGGAGATCCTTACTGGAAATGACGAAGATAATCAACATTTGTTATCTATTGCAGTGGAGCGTTTAATTTATGAGAAGCAGAAATCTGCTGCTCTAAATCAAGCTTCTGTTGATGCTTTCAAGAAAGTTTTCCGGGATATACAAAATCTAGTTTACAAGTATTCTGGTAAAGACAATTCACTTCTTACTATGTTCAAGGCTGGAAGCAAGGGTAATCTGATGAAACTAGTTCAACATAGCATGTGTCTTGGCTTGCAACACTCTTTGGTTACTCTATCCTTTAGCCTTCCACATAAGCTCTCGTGTTCTGCATGGAACAGTCAGAAGATTCCTCGTTATATTCAGAAGGATGGTCTTCCTGACCGTACACAGTCTTTCATACCCTATGCTGTGGTTGAAAATTCCTTTCTCTCGGGGCTTAATCCTTTTGAGTGTTTTGCTCATTCGGTGACAAATCGAGATAGCTCTTTCAGTGACAATGCTGAAGTTCCTGGGACTTTGACACGAAAACTTACGTTTTTAATGCGGGATATATATACTGCATATGATGGAACAGTGAGGAATGCATATGGAAATCAGCTGGTTCAGTTTTGTTATGGCATTGATACACCTACTAGTGTCTCTAGTGAATCGGATAGTGAGAATAATAATAGGGATCGTGATGTAGGTGGTCATCCTGTTGGGTCATTGGCTGCTTGTGCTATCTCAGAAGCTGCATATAGTGCTTTGGACCAACCAATTAGTCTACTTGAAGCTTCGCCGTTACTAAACCTAAAGCGAGTGCTGGAGTGTGGTTCAAAGAGGAATAGTATCAAACAAACCTTTTCATTGTTCTTATCAGAGAAACTTTCAAAACGAAGTTATGGATTTGAGTATGGAGCTCTAGGAGTTAAGAACCATTTAGAAAGAGTAATGTTTAAAGATATTGTGTCTAGTGTCATGATAACCTTCTCCCCACAGCCCTCCCGGAAAAAGCATTTTAGTCCTTGGGTTTGCCACTTTCATGTATGCAAGGAAATTTTGAAGAAAAGAAGATTGAAGATGAATTCTGTTATCCATTCCCTCAATATGCGGTGCGACTCTGTGAGACAAGAAGGAAGAATGAATTTGCCCTCTTTGCAAATAATAACCCAGGATTGTCCTCTAGCTGATTCACTGACAGAAGATGGTGATACAGTGTGCTTAACTGTTACAATAGCTGAAAACACAAAAAACTCTTTCCTGCAATTAGACTTCATTCAAGATTTGCTGATTCATTTCCTTCTTGGTACAGTTATAAGAGGCTTTGCTGAGATTGACAGGGTAGACATCGCATGGAATGACCGGCCAAAGGTCCCAAAACCTTGTTGTAGTCATGGTGAGCTCTACTTGCGGGTGACCATGTCTGGAGAAGGAAATTCAAGATTTTGGGCAACTCTCATGAATAATTGCCTCCCTATAATGGATTTGATTGATTGGACTCGTAGTCATCCAGATAACACTCATAGTCTCTGTTTGGCGTACGGAATAGATTCTGGATGGAAGTACTTTCTCAACAGTTTGGAGTCTGCAACGTTGGATATTGGTAAAACAATACGTCTTGAACATTTGCTGCTTGTTGCAAATTCTCTTTCGGCTACAGGAGAATTTGTTGGCTTAAATGTGAAAGGACTGACACATCAAAGGGAACATGCTTTGGTCAAAACACCCTTTATGCAAGCTTGCTTCTCAAGTCCTGGCGCTTGTTTGGTTAAAGCTGCCAAGGCTGGAATCAAGGACAACCTGTCAGGAAGTTTAGATGCTTTGGCATGGGGGAGAATGCCTTCGCTGGGAACGGGGGGACAGTTCGATATCCTATATTCTGGGAAGGGACACGAGCTTAATAAGCCTGTTGATGTTTATAATCTACTGGGTGGACAAAGCATTTGTGAGAAGCAGAACGCGAAGATTGAATCTCTTGATAAGAACAATATATCTGAGAAATATAGTGCTCAGTTAGTGCTTAAAAATGGAGGTTCTACCATTAAAGGACTTAAAAGGCTGGATAGTGTATCTAAATCAATTTTAAGGAAATTTTTGACACTGAACGATATTCAAAAGCTGTCGTTTGCATTGAGAACCATTTTACACAAGTATTCTTTAAATGAAAGATTAAATGAAGTGGACAAATCAACTTTGATGATGGCTTTATACTTTCATCCTCATCGGGACGAAAAGATTGGTGTTGGAGCACAAGACATTAAGGTTGGTAGCCACTCAAAGTATCAAAATACACGTTGCTTCGTATTGATACGATCGGATGGAACAACAGAAGATTTTTCATACCACAAGTGTGTTTTAGGTGCTTTGGAGATCATTGCTCCTCATAGAGTAAAGGGTTATCAGTCAAAATGGATGCAAGAAAAGTTTGAGTGA

Coding sequence (CDS)

ATGAGTTCTGCCGAAGACTTTCGACCAGGCCAGAAGGTGATGATCCATATGGAAGATGAACAGGATGGCGAGCTACCAATTCCATCTGGTCTCCTTACTGGCGTAAACTTTAGTGTCTCAAATCAGCAAGATATAGAGAATATAGCGGTAATAACAGTTGATGCAGCCAGCGAGGTATCTGATCCTAAGTTGGGACTTCCAAATCCATCTTATCAGTGCACCACATGTGGTGCTAGCTCTCTAAAATTTTGTGAAGGTCATTTTGGGGTTATCAAATTCCCATATACTATAATCCATCCTTATTTTCTCTCGGAAGTTGCACAAGTGTTGAATAAAGTTTGTCCAGGGTGTAAATCTATCAGGCAGGAACTATGGGGCAAGGTTGAGGATCCAACATCTGATTACAATCGACCTAAAGGTTGCAGATATTGTTTTGGAAGTCTAAAGGATTGGTATCCACCTATGAGGTTTAAGCTTTCAACTACTGATATGTTCAAAAAAAGTATGATTATGGTGGAAGTGAAAGAAAATATGTCGAAGAAATATCAAAAGAGGGTGGCTAAAGGAGGTTTGCCTTCAGATTATTGGGATTTTATCCCTAAAGATGAACAACAGGAAGAAAGTTACTGCAGACCAAACCGGAAAATCCTAACTCATGCTCAGGTTCATTATTTGTTGAAAGACATCGACCCAAAGTTTCTTAAAAAGTTTGTACCTGCAATAGATTCACTGTTTCTAAACTCTTTCCCTGTTACTCCGAACAGTCATCGTGTGACTGAAATGGCACATTCATTTTCAAATGGACAGCGTTTGATCTTTGATGAAAGAACCAGGGCTTACAAGAAGGTGGTTGATTTTAGAGGGACAGCCAACGAGTTAGGTTCTCGTGTTCTCGATTGTCTCAAAATTTCAAAGCTTAGCCCAGAGAAGTTACAAAGTAAAGATTTGGTTTACCAGCAAAAAAAAATTAAGGATACTGCTACTAGCTCATCTGGTTTAAGATGGATCAAAGATGTTGTTCTTGGAAAGCGGAGCGACCACTGTTTCCGCATGGTTGTCGTTGGTGATCCAAACATTGAGTTAAGTGAAATTGGCATACCTTGTCATGTTGCGGAGAGATTGCAAATATCTGAACATCTGAGTTCTTGGAATATGAAGAAATTAAGTACTTCTTGTTACCTTCATCTTGTTGAAAAGGGAGAGATCTATGTTCGTCGTGAAGGTCGTCTGGTTCGTGTACGTAATGTTCTTGAACTTAACATGGGGGACACTATATATAGGCCCCTAGCTGATGGGGATGTTGTGCTGGTTAATAGACCACCATCCATACATCAGCACTCACTTATTGCTTTATCTGTCAAGCTTCTTCCTGTCTCTGCAGTTCTTTCCTTAAACCCACTCTGTTGTTCTCCTTTCCGTGGAGATTTTGACGGTGACTGCCTTCATGGCTATGTTCCTCAATCGTTGGAAGCCCGAGTGGAGGTTAGAGAGCTAGTTTCCCTAGATAGACAGCTAATTAATGGCCAAAGTGGTAGAAATCTGCTGTCACTTAGTCATGATAGTTTAACTGCTGCTCATTTAATTCTGGAAGATGGAGTTTCGTTCAATCTTTTCCAGATGCAGCAGTTGCAAATGCTCACTTTACATCAGTTGTTGCCTCCAGCAATTGTAAAATCCCCTTTGCTTAGAAATTGTGCTTGGACTGGGAAACAGTTATTCAGCATCCTCCTACCTCCTGATTTTGATTATTCTTCTCCTTCTCACAATGTTTTCATTGAGAAGGGAGAATTAATATCTTCAGAAGGATCTTACTGGCTTCGCGATAGTGGTAGAAACCTCTTCCAAGCGCTAATAGAACACTGTCAGGGCAAGACCCTTGATTACTTGCGTGATGCTCAAGGGGTTCTTTGTGAATGGTTATCGACGAGGGGCTTGAGCGTTTCATTGTCAGACTTGTACCTCTCTGTGGATTCATACTCTCACAAAAACATGATGGATGATATCTTTTGTGGGTTACAGGAAGCTGAGGAAACATGTAATTTAAAGCAGCTGATGGTGGATTCACATAAGGAGATCCTTACTGGAAATGACGAAGATAATCAACATTTGTTATCTATTGCAGTGGAGCGTTTAATTTATGAGAAGCAGAAATCTGCTGCTCTAAATCAAGCTTCTGTTGATGCTTTCAAGAAAGTTTTCCGGGATATACAAAATCTAGTTTACAAGTATTCTGGTAAAGACAATTCACTTCTTACTATGTTCAAGGCTGGAAGCAAGGGTAATCTGATGAAACTAGTTCAACATAGCATGTGTCTTGGCTTGCAACACTCTTTGGTTACTCTATCCTTTAGCCTTCCACATAAGCTCTCGTGTTCTGCATGGAACAGTCAGAAGATTCCTCGTTATATTCAGAAGGATGGTCTTCCTGACCGTACACAGTCTTTCATACCCTATGCTGTGGTTGAAAATTCCTTTCTCTCGGGGCTTAATCCTTTTGAGTGTTTTGCTCATTCGGTGACAAATCGAGATAGCTCTTTCAGTGACAATGCTGAAGTTCCTGGGACTTTGACACGAAAACTTACGTTTTTAATGCGGGATATATATACTGCATATGATGGAACAGTGAGGAATGCATATGGAAATCAGCTGGTTCAGTTTTGTTATGGCATTGATACACCTACTAGTGTCTCTAGTGAATCGGATAGTGAGAATAATAATAGGGATCGTGATGTAGGTGGTCATCCTGTTGGGTCATTGGCTGCTTGTGCTATCTCAGAAGCTGCATATAGTGCTTTGGACCAACCAATTAGTCTACTTGAAGCTTCGCCGTTACTAAACCTAAAGCGAGTGCTGGAGTGTGGTTCAAAGAGGAATAGTATCAAACAAACCTTTTCATTGTTCTTATCAGAGAAACTTTCAAAACGAAGTTATGGATTTGAGTATGGAGCTCTAGGAGTTAAGAACCATTTAGAAAGAGTAATGTTTAAAGATATTGTGTCTAGTGTCATGATAACCTTCTCCCCACAGCCCTCCCGGAAAAAGCATTTTAGTCCTTGGGTTTGCCACTTTCATGTATGCAAGGAAATTTTGAAGAAAAGAAGATTGAAGATGAATTCTGTTATCCATTCCCTCAATATGCGGTGCGACTCTGTGAGACAAGAAGGAAGAATGAATTTGCCCTCTTTGCAAATAATAACCCAGGATTGTCCTCTAGCTGATTCACTGACAGAAGATGGTGATACAGTGTGCTTAACTGTTACAATAGCTGAAAACACAAAAAACTCTTTCCTGCAATTAGACTTCATTCAAGATTTGCTGATTCATTTCCTTCTTGGTACAGTTATAAGAGGCTTTGCTGAGATTGACAGGGTAGACATCGCATGGAATGACCGGCCAAAGGTCCCAAAACCTTGTTGTAGTCATGGTGAGCTCTACTTGCGGGTGACCATGTCTGGAGAAGGAAATTCAAGATTTTGGGCAACTCTCATGAATAATTGCCTCCCTATAATGGATTTGATTGATTGGACTCGTAGTCATCCAGATAACACTCATAGTCTCTGTTTGGCGTACGGAATAGATTCTGGATGGAAGTACTTTCTCAACAGTTTGGAGTCTGCAACGTTGGATATTGGTAAAACAATACGTCTTGAACATTTGCTGCTTGTTGCAAATTCTCTTTCGGCTACAGGAGAATTTGTTGGCTTAAATGTGAAAGGACTGACACATCAAAGGGAACATGCTTTGGTCAAAACACCCTTTATGCAAGCTTGCTTCTCAAGTCCTGGCGCTTGTTTGGTTAAAGCTGCCAAGGCTGGAATCAAGGACAACCTGTCAGGAAGTTTAGATGCTTTGGCATGGGGGAGAATGCCTTCGCTGGGAACGGGGGGACAGTTCGATATCCTATATTCTGGGAAGGGACACGAGCTTAATAAGCCTGTTGATGTTTATAATCTACTGGGTGGACAAAGCATTTGTGAGAAGCAGAACGCGAAGATTGAATCTCTTGATAAGAACAATATATCTGAGAAATATAGTGCTCAGTTAGTGCTTAAAAATGGAGGTTCTACCATTAAAGGACTTAAAAGGCTGGATAGTGTATCTAAATCAATTTTAAGGAAATTTTTGACACTGAACGATATTCAAAAGCTGTCGTTTGCATTGAGAACCATTTTACACAAGTATTCTTTAAATGAAAGATTAAATGAAGTGGACAAATCAACTTTGATGATGGCTTTATACTTTCATCCTCATCGGGACGAAAAGATTGGTGTTGGAGCACAAGACATTAAGGTTGGTAGCCACTCAAAGTATCAAAATACACGTTGCTTCGTATTGATACGATCGGATGGAACAACAGAAGATTTTTCATACCACAAGTGTGTTTTAGGTGCTTTGGAGATCATTGCTCCTCATAGAGTAAAGGGTTATCAGTCAAAATGGATGCAAGAAAAGTTTGAGTGA

Protein sequence

MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVSDPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSESDSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSIKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWVCHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPCCSHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACLVKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSICEKQNAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE

Homology

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BLAST of PI0019459 vs. ExPASy Swiss-Prot
Match: Q9LQ02 (DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPD1 PE=1 SV=1)

HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 775/1476 (52.51%), Postives = 1020/1476 (69.11%), Query Frame = 0


Query: 17   MEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVSDPKLGLPNPSYQCTTC 76
            MED+ + EL +P G LT + FS+SN  D + ++V+ V+A ++V+D +LGLPNP   C TC
Sbjct: 1    MEDDCE-ELQVPVGTLTSIGFSISNNNDRDKMSVLEVEAPNQVTDSRLGLPNPDSVCRTC 60

Query: 77   GASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTSDYN 136
            G+   K CEGHFGVI F Y+II+PYFL EVA +LNK+CPGCK IR++ +   ED      
Sbjct: 61   GSKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPGCKYIRKKQFQITED------ 120

Query: 137  RPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYW 196
            +P+ CRYC  +L   YP M+F+++T ++F++S I+VEV E    K +KR     LP DYW
Sbjct: 121  QPERCRYC--TLNTGYPLMKFRVTTKEVFRRSGIVVEVNEESLMKLKKRGVL-TLPPDYW 180

Query: 197  DFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSH 256
             F+P+D   +ES  +P R+I+THAQV+ LL  ID + +KK +P  +SL L SFPVTPN +
Sbjct: 181  SFLPQDSNIDESCLKPTRRIITHAQVYALLLGIDQRLIKKDIPMFNSLGLTSFPVTPNGY 240

Query: 257  RVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD 316
            RVTE+ H F NG RLIFDERTR YKK+V F G   EL SRV++C++ S+L  E +  SKD
Sbjct: 241  RVTEIVHQF-NGARLIFDERTRIYKKLVGFEGNTLELSSRVMECMQYSRLFSETVSSSKD 300

Query: 317  LVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQ 376
                 +K  DT     GLR++KDV+LGKRSDH FR VVVGDP+++L+EIGIP  +A+RLQ
Sbjct: 301  SANPYQKKSDT-PKLCGLRFMKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQ 360

Query: 377  ISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVV 436
            +SEHL+  N ++L TS    L++  E++VRR  RLV ++ V +L  GD I+R L DGD V
Sbjct: 361  VSEHLNQCNKERLVTSFVPTLLDNKEMHVRRGDRLVAIQ-VNDLQTGDKIFRSLMDGDTV 420

Query: 437  LVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEV 496
            L+NRPPSIHQHSLIA++V++LP ++V+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VE+
Sbjct: 421  LMNRPPSIHQHSLIAMTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVEL 480

Query: 497  RELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSFNLFQMQQLQMLTLHQLLPP 556
             ELV+LD+QLIN Q+GRNLLSL  DSLTAA+L+ +E     N  QMQQLQM    QL PP
Sbjct: 481  DELVALDKQLINRQNGRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPP 540

Query: 557  AIVK-SPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELIS-SEGSYWLRDSGRN 616
            AI+K SP      WTG QLF +L PP FDY+ P +NV +  GEL+S SEGS WLRD   N
Sbjct: 541  AIIKASPSSTEPQWTGMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGN 600

Query: 617  LFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGL 676
              + L++H +GK LD +  AQ +L +WL  RGLSVSL+DLYLS D  S KN+ ++I  GL
Sbjct: 601  FIERLLKHDKGKVLDIIYSAQEMLSQWLLMRGLSVSLADLYLSSDLQSRKNLTEEISYGL 660

Query: 677  QEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKV 736
            +EAE+ CN +QLMV+S ++ L  N ED +      + R  YE+QKSA L++ +V AFK  
Sbjct: 661  REAEQVCNKQQLMVESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDA 720

Query: 737  FRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCS 796
            +RD+Q L Y+Y  + NS L M KAGSKGN+ KLVQHSMC+GLQ+S V+LSF  P +L+C+
Sbjct: 721  YRDVQALAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCA 780

Query: 797  AWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV 856
            AWN    P    K      T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA++
Sbjct: 781  AWNDPNSPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADL 840

Query: 857  PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSESDSENNNRDRDVG 916
            PGTL+R+L F MRDIY AYDGTVRN++GNQLVQF Y  D P                D+ 
Sbjct: 841  PGTLSRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETDGPV--------------EDIT 900

Query: 917  GHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSIKQTFSLFLSEKL 976
            G  +GSL+ACA+SEAAYSALDQPISLLE SPLLNLK VLECGSK+   +QT SL+LSE L
Sbjct: 901  GEALGSLSACALSEAAYSALDQPISLLETSPLLNLKNVLECGSKKGQREQTMSLYLSEYL 960

Query: 977  SKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWVCHFHVCKEILKK 1036
            SK+ +GFEYG+L +KNHLE++ F +IVS+ MI FSP  + K   SPWVCHFH+ +++LK+
Sbjct: 961  SKKKHGFEYGSLEIKNHLEKLSFSEIVSTSMIIFSPSSNTKVPLSPWVCHFHISEKVLKR 1020

Query: 1037 RRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLTVTIAEN 1096
            ++L   SV+ SLN +  S  +E ++++  L I  T  C   D   +D D VC+TVT+ E 
Sbjct: 1021 KQLSAESVVSSLNEQYKSRNRELKLDIVDLDIQNTNHCSSDDQAMKD-DNVCITVTVVEA 1080

Query: 1097 TKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPCCSH--GELYLRVT 1156
            +K+S L+LD I+ +LI FLL + ++G   I +V+I W DRPK PK   +H  GELYL+VT
Sbjct: 1081 SKHSVLELDAIRLVLIPFLLDSPVKGDQGIKKVNILWTDRPKAPKRNGNHLAGELYLKVT 1140

Query: 1157 MSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATL 1216
            M G+ G    W  L+  CLPIMD+IDW RSHPDN    C  YGID+G   F+ +LESA  
Sbjct: 1141 MYGDRGKRNCWTALLETCLPIMDMIDWGRSHPDNIRQCCSVYGIDAGRSIFVANLESAVS 1200

Query: 1217 DIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACLVKA 1276
            D GK I  EHLLLVA+SLS TGEFV LN KG + QR+      PF QACFSSP  C +KA
Sbjct: 1201 DTGKEILREHLLLVADSLSVTGEFVALNAKGWSKQRQVESTPAPFTQACFSSPSQCFLKA 1260

Query: 1277 AKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSICEKQ 1336
            AK G++D+L GS+DALAWG++P  GTG QF+I+ S K H    PVDVY+LL       + 
Sbjct: 1261 AKEGVRDDLQGSIDALAWGKVPGFGTGDQFEIIISPKVHGFTTPVDVYDLLSSTKTMRRT 1320

Query: 1337 NAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLD--SVSKSILRKFLTLNDIQKLSFA 1396
            N+  +       S+K + Q       + +K +K LD   +  S+LR   T  +I+ LS +
Sbjct: 1321 NSAPK-------SDKATVQPFGLLHSAFLKDIKVLDGKGIPMSLLRTIFTWKNIELLSQS 1380

Query: 1397 LRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLI 1456
            L+ ILH Y +NE LNE D+  + M L  HP+  EKIG G + I+V + SK+ ++ CF ++
Sbjct: 1381 LKRILHSYEINELLNERDEGLVKMVLQLHPNSVEKIGPGVKGIRV-AKSKHGDSCCFEVV 1440

Query: 1457 RSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQ 1483
            R DGT EDFSYHKCVLGA +IIAP ++  Y+SK+++
Sbjct: 1441 RIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLK 1440

[Close]

BLAST of PI0019459 vs. ExPASy Swiss-Prot
Match: Q5D869 (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.7e-109
Identity = 372/1374 (27.07%), Postives = 609/1374 (44.32%), Query Frame = 0


Query: 17   MEDEQDGELPIPSGLLTGVNFSVSNQQD--IENIAVITVDAASEVSDPKLGLPNPSYQCT 76
            ME+E   E  I  G + G+ F++++  +  I++I+   ++  S++++  LGLP    +C 
Sbjct: 1    MEEESTSE--ILDGEIVGITFALASHHEICIQSISESAINHPSQLTNAFLGLPLEFGKCE 60

Query: 77   TCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTSD 136
            +CGA+    CEGHFG I+ P  I HP  ++E+ Q+L+ +C  C  I+             
Sbjct: 61   SCGATEPDKCEGHFGYIQLPVPIYHPAHVNELKQMLSLLCLKCLKIK------------- 120

Query: 137  YNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKY--QKRVAKGGLP 196
              + KG     G L D       +L      + S I ++ + +    Y   K  ++  L 
Sbjct: 121  --KAKGTS---GGLAD-------RLLGVCCEEASQISIKDRASDGASYLELKLPSRSRLQ 180

Query: 197  SDYWDFIPK-DEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKF-----VPAIDSLFL 256
               W+F+ +   +    Y RP    L   +V  +L+ I  +  KK      +P  +   L
Sbjct: 181  PGCWNFLERYGYRYGSDYTRP----LLAREVKEILRRIPEESRKKLTAKGHIPQ-EGYIL 240

Query: 257  NSFPVTPNSHRVTEMAHSFS----NGQRLIFDERTRAYKKVVDFRGT------------- 316
               PV PN   V E +  FS    +  R+   E     KKV+  + +             
Sbjct: 241  EYLPVPPNCLSVPEASDGFSTMSVDPSRI---ELKDVLKKVIAIKSSRSGETNFESHKAE 300

Query: 317  ANELGSRVLDCLKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCF 376
            A+E+  RV+D     + + +  ++ D+ Y   KI D+++S +    ++ + + K S    
Sbjct: 301  ASEM-FRVVDTYLQVRGTAKAARNIDMRYGVSKISDSSSSKAWTEKMRTLFIRKGSGFSS 360

Query: 377  RMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWN----MKKLSTSCYLHLVEKGEIYVR 436
            R V+ GD    ++E+GIP  +A+R+   E +S  N     K +     L   +    Y  
Sbjct: 361  RSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNRGYLQKLVDDKLCLSYTQGSTTYSL 420

Query: 437  REGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLN 496
            R+G     +   EL  G  ++R + DGDVV +NRPP+ H+HSL AL V +   + V  +N
Sbjct: 421  RDGS----KGHTELKPGQVVHRRVMDGDVVFINRPPTTHKHSLQALRVYVHEDNTV-KIN 480

Query: 497  PLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAA 556
            PL CSP   DFDGDC+H + PQSL A+ EV EL S+++QL++  +G+ +L +  DSL + 
Sbjct: 481  PLMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSSHTGQLILQMGSDSLLSL 540

Query: 557  HLILEDGVSFNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSS 616
             ++LE  V  +    QQL M     L PPA+ KS      AWT  Q+  +  P     S 
Sbjct: 541  RVMLE-RVFLDKATAQQLAMYGSLSLPPPALRKSS-KSGPAWTVFQILQLAFPERL--SC 600

Query: 617  PSHNVFIEKGELISSEGSYWLRDSGRN--LFQALIEHCQGKTLDYLRDAQGVLCEWLSTR 676
                  ++  +L+  +       S  N  +    +E    +TL +    Q +L E L   
Sbjct: 601  KGDRFLVDGSDLLKFDFGVDAMGSIINEIVTSIFLEKGPKETLGFFDSLQPLLMESLFAE 660

Query: 677  GLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHL 736
            G S+SL DL     S S  +M  D+   L   E +  + +L +    E+   N       
Sbjct: 661  GFSLSLEDL-----SMSRADM--DVIHNLIIREISPMVSRLRLSYRDELQLENS------ 720

Query: 737  LSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLM 796
                       K K  A N      F      I+NL+     K NS +T           
Sbjct: 721  ---------IHKVKEVAAN------FMLKSYSIRNLI---DIKSNSAIT----------- 780

Query: 797  KLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVEN 856
            KLVQ +  LGLQ S     ++       + +  +K  R I   G          + +V+ 
Sbjct: 781  KLVQQTGFLGLQLSDKKKFYTKTLVEDMAIFCKRKYGR-ISSSG---------DFGIVKG 840

Query: 857  SFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGN 916
             F  GL+P+E  AHS+  R+     S     PGTL + L  ++RDI    DGTVRN   N
Sbjct: 841  CFFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSN 900

Query: 917  QLVQFCYGIDTPTSVSSESDSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEA 976
             ++QF YG+          DSE  ++     G PVG LAA A+S  AY A      +L++
Sbjct: 901  SVIQFKYGV----------DSERGHQGLFEAGEPVGVLAATAMSNPAYKA------VLDS 960

Query: 977  SPLLN-----LKRVLEC--GSKRNSIKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVM 1036
            SP  N     +K VL C    +  +  +   L+L+E    + +  E  A  V+N L +V 
Sbjct: 961  SPNSNSSWELMKEVLLCKVNFQNTTNDRRVILYLNECHCGKRFCQENAACTVRNKLNKVS 1020

Query: 1037 FKDIVSSVMITFSPQPSRKKHFSPWVC---HFHVCKEILKKRRLKMNSVIHSLNMRCDSV 1096
             KD     ++ +  QP+  + F    C   H H+ K +L+   + M  +        +S+
Sbjct: 1021 LKDTAVEFLVEYRKQPTISEIFGIDSCLHGHIHLNKTLLQDWNISMQDIHQKCEDVINSL 1080

Query: 1097 RQEGRMNLP-----SLQIITQDCPLADSLTEDG-DTVCLTVTIAENTKNSFLQLDFIQDL 1156
             Q+ +         +   +++ C   D     G D  CLT +      +    LD + + 
Sbjct: 1081 GQKKKKKATDDFKRTSLSVSECCSFRDPCGSKGSDMPCLTFSYNATDPDLERTLDVLCNT 1140

Query: 1157 LIHFLLGTVIRGFAEIDRVDIAWNDRPKVP----KPCCSHGELYLRVTMSGEG---NSRF 1216
            +   LL  VI+G + I   +I WN          +     GE  L VT+       +   
Sbjct: 1141 VYPVLLEIVIKGDSRICSANIIWNSSDMTTWIRNRHASRRGEWVLDVTVEKSAVKQSGDA 1200

Query: 1217 WATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDIGKTIRLEH 1276
            W  ++++CL ++ LID  RS P +   +    G+   ++  +  L ++   + K +  EH
Sbjct: 1201 WRVVIDSCLSVLHLIDTKRSIPYSVKQVQELLGLSCAFEQAVQRLSASVRMVSKGVLKEH 1259

Query: 1277 LLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACLVKAAKAGIKDNLS 1331
            ++L+AN+++ +G  +G N  G         +K PF +A   +P  C  KAA+    D+LS
Sbjct: 1261 IILLANNMTCSGTMLGFNSGGYKALTRSLNIKAPFTEATLIAPRKCFEKAAEKCHTDSLS 1259

HSP 2 Score: 64.7 bits (156), Expect = 1.0e-08
Identity = 34/107 (31.78%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 1377 LNDIQKLSFALRTILH--KYSLNERLNEVDKS-TLMMALYFHPHRDEKIGVGAQDIKVGS 1436
            L+D++ +   LR I+H   Y   + +++ DK+  L   L FHP ++ K+G G   I V  
Sbjct: 1740 LSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDK 1799

Query: 1437 HSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKW 1481
            H+ + ++RCF ++ +DG  +DFSY K +   L    P R + +  K+
Sbjct: 1800 HTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKY 1846

[Close]

BLAST of PI0019459 vs. ExPASy Swiss-Prot
Match: P36594 (DNA-directed RNA polymerase II subunit rpb1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpb1 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-59
Identity = 236/940 (25.11%), Postives = 409/940 (43.51%), Query Frame = 0


Query: 27  IPSGLLTGVNFSVSNQQDIENIAVI------TVDAASE------VSDPKLGLPNPSYQCT 86
           +P   +  V F + + ++I +++V       T+D + +      + DP+LG  +  ++C 
Sbjct: 11  VPLRRVEEVQFGILSPEEIRSMSVAKIEFPETMDESGQRPRVGGLLDPRLGTIDRQFKCQ 70

Query: 87  TCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTSD 146
           TCG  ++  C GHFG I+    + H  FLS++ ++L  VC  C  ++ +      + T  
Sbjct: 71  TCG-ETMADCPGHFGHIELAKPVFHIGFLSKIKKILECVCWNCGKLKIDSSNPKFNDTQR 130

Query: 147 YNRPKGCRYCFGSLKDWYPPMRFKLST-TDMFKKSMIMVEVKENMSKKYQKRVAKGGLPS 206
           Y  PK       ++          LS  +D F  S     +        Q  + K GL  
Sbjct: 131 YRDPKNRLNAVWNVCKTKMVCDTGLSAGSDNFDLSNPSANMGHGGCGAAQPTIRKDGL-- 190

Query: 207 DYWDFIPKDEQQEESYCRPNRKILTHAQVHYLL-----KDIDPKFLKKFVPAIDSLFLNS 266
             W    + + + +    P +++L+  +VH +      +D+    L +     D + +  
Sbjct: 191 RLWGSWKRGKDESD---LPEKRLLSPLEVHTIFTHISSEDLAHLGLNEQYARPDWMIITV 250

Query: 267 FPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSP 326
            PV P S R +      S G+    D+ T     ++                  +S+   
Sbjct: 251 LPVPPPSVRPSISVDGTSRGE----DDLTHKLSDIIKANANVRRCEQEGAPAHIVSEYE- 310

Query: 327 EKLQSKDLVYQQKKI--KDTATSSSGLRWIKDV--------------VLGKRSDHCFRMV 386
           + LQ     Y   +I  +  A   SG R +K +              ++GKR D   R V
Sbjct: 311 QLLQFHVATYMDNEIAGQPQALQKSG-RPLKSIRARLKGKEGRLRGNLMGKRVDFSARTV 370

Query: 387 VVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKG-------EIYVR 446
           + GDPN+ L E+G+P  +A+ L   E ++ +N+ +L       LV  G       +  +R
Sbjct: 371 ITGDPNLSLDELGVPRSIAKTLTYPETVTPYNIYQLQ-----ELVRNGPDEHPGAKYIIR 430

Query: 447 REGRLVRVR-----NVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSA 506
             G  + +R       + L  G  + R + DGDVV+ NR PS+H+ S++   ++++P S 
Sbjct: 431 DTGERIDLRYHKRAGDIPLRYGWRVERHIRDGDVVIFNRQPSLHKMSMMGHRIRVMPYS- 490

Query: 507 VLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHD 566
              LN    SP+  DFDGD ++ +VPQS E R E++E+  + +Q+++ QS + ++ +  D
Sbjct: 491 TFRLNLSVTSPYNADFDGDEMNMHVPQSEETRAEIQEITMVPKQIVSPQSNKPVMGIVQD 550

Query: 567 SLTAAH--LILEDGVSFNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLP 626
           +L       + ++ ++ N      L +     +LPP ++  P      WTGKQ+ S+++P
Sbjct: 551 TLAGVRKFSLRDNFLTRNAVMNIMLWVPDWDGILPPPVILKP---KVLWTGKQILSLIIP 610

Query: 627 P------DFDYSSPSH----NVFIEKGELI----------SSEG----SYWLRDSGRNLF 686
                  D D  S S+     + IE GE+I          +S+G    + W ++ G    
Sbjct: 611 KGINLIRDDDKQSLSNPTDSGMLIENGEIIYGVVDKKTVGASQGGLVHTIW-KEKGP--- 670

Query: 687 QALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQE 746
               E C+G    +    Q V+  WL   G S+ + D     D+      M ++   ++E
Sbjct: 671 ----EICKG----FFNGIQRVVNYWLLHNGFSIGIGDTIADADT------MKEVTRTVKE 730

Query: 747 AEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVFR 806
           A     + + + D+    L    E    L      R  +E + S  LNQA         R
Sbjct: 731 ARR--QVAECIQDAQHNRL--KPEPGMTL------RESFEAKVSRILNQA---------R 790

Query: 807 DIQNLVYKYSGKD-NSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSA 866
           D      ++S KD N++  M  AGSKG+ + + Q S C+G Q   +     +P       
Sbjct: 791 DNAGRSAEHSLKDSNNVKQMVAAGSKGSFINISQMSACVGQQ---IVEGKRIPF-----G 850

Query: 867 WNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV- 892
           +  + +P + + D  P+ ++ FI     ENS+L GL P E F H++  R+       +  
Sbjct: 851 FKYRTLPHFPKDDDSPE-SRGFI-----ENSYLRGLTPQEFFFHAMAGREGLIDTAVKTA 877

[Close]

BLAST of PI0019459 vs. ExPASy Swiss-Prot
Match: P11414 (DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=POLR2A PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 3.9e-53
Identity = 239/965 (24.77%), Postives = 405/965 (41.97%), Query Frame = 0


Query: 15  IHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAV----ITVDAASEVSDPKL-GLPNP 74
           +H      G+   P   +  V F V +  +++ ++V    I     +E   PKL GL +P
Sbjct: 1   MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP 60

Query: 75  -------SYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVC-------- 134
                  + +C TC A ++  C GHFG I+    + H  FL +  +VL  VC        
Sbjct: 61  RQGVIERTGRCQTC-AGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLV 120

Query: 135 ----PGCKSIRQELWGKVEDP-TSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSM 194
               P  K I  +  G+ +   T  Y+  KG   C G        M  K           
Sbjct: 121 DSNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGG-----EEMDNKFGVEQPEGDED 180

Query: 195 IMVEVKENMSKKYQKRVAKGGLP-SDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKD 254
           +  E       +YQ R+ + GL     W  + +D Q+++    P R       VH + K 
Sbjct: 181 LTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPER-------VHEIFKR 240

Query: 255 IDPK--FLKKFVPAI---DSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKV 314
           I  +  F+    P     + + +   PV P S R   +    +  Q    D+ T     +
Sbjct: 241 ISDEECFVLGMEPRYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQ----DDLTHKLADI 300

Query: 315 VDF-----RGTANELGSRVL-DCLKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRW-- 374
           V       R   N   + V+ + +K+ +     +   +L    + ++ +      L+   
Sbjct: 301 VKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRL 360

Query: 375 ------IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLS 434
                 ++  ++GKR D   R V+  DPN+ + ++G+P  +A  +  +E ++ +N+ +L 
Sbjct: 361 KGKEGRVRGNLMGKRVDFSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQ 420

Query: 435 TSCYLHLVEKG-------EIYVRREGRLVRVR-----NVLELNMGDTIYRPLADGDVVLV 494
                 LV +G       +  +R  G  + +R     + L L  G  + R + DGD+V+ 
Sbjct: 421 -----ELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIF 480

Query: 495 NRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRE 554
           NR P++H+ S++   V++LP S    LN    +P+  DFDGD ++ ++PQSLE R E++E
Sbjct: 481 NRQPTLHKMSMMGHRVRILPWS-TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQE 540

Query: 555 LVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQMQQLQML--TLHQLLP-P 614
           L  + R ++  QS R ++ +  D+LTA     +  V     ++  L M   T    +P P
Sbjct: 541 LAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQP 600

Query: 615 AIVKSPLLRNCAWTGKQLFSILLP------------PDFDYSSP-------SHNVFIEKG 674
           AI+K   L    WTGKQ+FS+++P            PD + S P          V +E G
Sbjct: 601 AILKPRPL----WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENG 660

Query: 675 ELI------SSEGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSL 734
           ELI       S G+     +G  +  + +E     T  +  + Q V+  WL   G ++ +
Sbjct: 661 ELIMGILCKKSLGT----SAGSLVHISYLEMGHDITRLFYSNIQTVINNWLLIEGHTIGI 720

Query: 735 SDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVE 794
            D     DS +++++ + I    Q+  E         ++  E   GN             
Sbjct: 721 GDSI--ADSKTYQDIQNTIKKAKQDVIEVIEKAH---NNELEPTPGN-----------TL 780

Query: 795 RLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHS 854
           R  +E Q +  LN    DA  K     Q  + +Y    N+  +M  +G+KG+ + + Q  
Sbjct: 781 RQTFENQVNRILN----DARDKTGSSAQKSLSEY----NNFKSMVVSGAKGSKINISQVI 840

Query: 855 MCLGLQH-SLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSG 892
             +G Q+     + F   H+          +P +I+ D  P+          VENS+L+G
Sbjct: 841 AVVGQQNVEGKRIPFGFKHR---------TLPHFIKDDYGPESR------GFVENSYLAG 894

[Close]

BLAST of PI0019459 vs. ExPASy Swiss-Prot
Match: P24928 (DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 3.9e-53
Identity = 239/965 (24.77%), Postives = 405/965 (41.97%), Query Frame = 0


Query: 15  IHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAV----ITVDAASEVSDPKL-GLPNP 74
           +H      G+   P   +  V F V +  +++ ++V    I     +E   PKL GL +P
Sbjct: 1   MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP 60

Query: 75  -------SYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVC-------- 134
                  + +C TC A ++  C GHFG I+    + H  FL +  +VL  VC        
Sbjct: 61  RQGVIERTGRCQTC-AGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLV 120

Query: 135 ----PGCKSIRQELWGKVEDP-TSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSM 194
               P  K I  +  G+ +   T  Y+  KG   C G        M  K           
Sbjct: 121 DSNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGG-----EEMDNKFGVEQPEGDED 180

Query: 195 IMVEVKENMSKKYQKRVAKGGLP-SDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKD 254
           +  E       +YQ R+ + GL     W  + +D Q+++    P R       VH + K 
Sbjct: 181 LTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPER-------VHEIFKR 240

Query: 255 IDPK--FLKKFVPAI---DSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKV 314
           I  +  F+    P     + + +   PV P S R   +    +  Q    D+ T     +
Sbjct: 241 ISDEECFVLGMEPRYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQ----DDLTHKLADI 300

Query: 315 VDF-----RGTANELGSRVL-DCLKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRW-- 374
           V       R   N   + V+ + +K+ +     +   +L    + ++ +      L+   
Sbjct: 301 VKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRL 360

Query: 375 ------IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLS 434
                 ++  ++GKR D   R V+  DPN+ + ++G+P  +A  +  +E ++ +N+ +L 
Sbjct: 361 KGKEGRVRGNLMGKRVDFSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQ 420

Query: 435 TSCYLHLVEKG-------EIYVRREGRLVRVR-----NVLELNMGDTIYRPLADGDVVLV 494
                 LV +G       +  +R  G  + +R     + L L  G  + R + DGD+V+ 
Sbjct: 421 -----ELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIF 480

Query: 495 NRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRE 554
           NR P++H+ S++   V++LP S    LN    +P+  DFDGD ++ ++PQSLE R E++E
Sbjct: 481 NRQPTLHKMSMMGHRVRILPWS-TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQE 540

Query: 555 LVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQMQQLQML--TLHQLLP-P 614
           L  + R ++  QS R ++ +  D+LTA     +  V     ++  L M   T    +P P
Sbjct: 541 LAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQP 600

Query: 615 AIVKSPLLRNCAWTGKQLFSILLP------------PDFDYSSP-------SHNVFIEKG 674
           AI+K   L    WTGKQ+FS+++P            PD + S P          V +E G
Sbjct: 601 AILKPRPL----WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENG 660

Query: 675 ELI------SSEGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSL 734
           ELI       S G+     +G  +  + +E     T  +  + Q V+  WL   G ++ +
Sbjct: 661 ELIMGILCKKSLGT----SAGSLVHISYLEMGHDITRLFYSNIQTVINNWLLIEGHTIGI 720

Query: 735 SDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVE 794
            D     DS +++++ + I    Q+  E         ++  E   GN             
Sbjct: 721 GDSI--ADSKTYQDIQNTIKKAKQDVIEVIEKAH---NNELEPTPGN-----------TL 780

Query: 795 RLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHS 854
           R  +E Q +  LN    DA  K     Q  + +Y    N+  +M  +G+KG+ + + Q  
Sbjct: 781 RQTFENQVNRILN----DARDKTGSSAQKSLSEY----NNFKSMVVSGAKGSKINISQVI 840

Query: 855 MCLGLQH-SLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSG 892
             +G Q+     + F   H+          +P +I+ D  P+          VENS+L+G
Sbjct: 841 AVVGQQNVEGKRIPFGFKHR---------TLPHFIKDDYGPESR------GFVENSYLAG 894

[Close]

BLAST of PI0019459 vs. ExPASy TrEMBL
Match: A0A0A0L2L4 (DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_3G039340 PE=4 SV=1)

HSP 1 Score: 2947.5 bits (7640), Expect = 0.0e+00
Identity = 1449/1486 (97.51%), Postives = 1467/1486 (98.72%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            MSS EDFRPGQKVMIHMEDEQDGELPIPSGLLTG+NFSVSNQQDIENIAVITVDAA+EVS
Sbjct: 1    MSSVEDFRPGQKVMIHMEDEQDGELPIPSGLLTGINFSVSNQQDIENIAVITVDAANEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKS+
Sbjct: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSV 120

Query: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180
            RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK
Sbjct: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180

Query: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240
            KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA
Sbjct: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240

Query: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300
            IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC
Sbjct: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300

Query: 301  LKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360
            LKISKLSPEKLQ+KDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE
Sbjct: 301  LKISKLSPEKLQNKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360

Query: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN 420
            LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN
Sbjct: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN 420

Query: 421  MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC 480
            MGDTIYRPLADGD+VLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC
Sbjct: 421  MGDTIYRPLADGDIVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC 480

Query: 481  LHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQM 540
            LHGYVPQSLEARVEVRELVSLD+QL NGQSGRNLLSLSHDSLTAAHLILEDGVS NLFQM
Sbjct: 481  LHGYVPQSLEARVEVRELVSLDKQLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQM 540

Query: 541  QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS 600
            QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS
Sbjct: 541  QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS 600

Query: 601  EGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS 660
            EGSYWLRDSGRNLFQALIEHC+GKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS
Sbjct: 601  EGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS 660

Query: 661  HKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAA 720
            H+NMMDDIFCGLQEAEETCNLKQLMVDSHKEIL GNDEDNQHLLSIAVERLIYEKQKSAA
Sbjct: 661  HENMMDDIFCGLQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIYEKQKSAA 720

Query: 721  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT 780
            LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT
Sbjct: 721  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT 780

Query: 781  LSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840
            LSFSLPHKLSC+AWNSQK+PRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT
Sbjct: 781  LSFSLPHKLSCAAWNSQKMPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840

Query: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSES 900
            NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCY ID PT   SES
Sbjct: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPT---SES 900

Query: 901  DSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSI 960
            +SENNNRDR +GGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNS 
Sbjct: 901  ESENNNRDRGIGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNST 960

Query: 961  KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWV 1020
            KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMI FSP PSRKKHFSPWV
Sbjct: 961  KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPLPSRKKHFSPWV 1020

Query: 1021 CHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGD 1080
            CHFHVCKEILKKRRLKMNSVIHSLNMRCDS+RQEGRMNLPSLQIITQDCPLADSLTEDGD
Sbjct: 1021 CHFHVCKEILKKRRLKMNSVIHSLNMRCDSMRQEGRMNLPSLQIITQDCPLADSLTEDGD 1080

Query: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPCCS 1140
            TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGF EIDRVDI WNDRPKVPKP CS
Sbjct: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFTEIDRVDITWNDRPKVPKPRCS 1140

Query: 1141 HGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL 1200
            HGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL
Sbjct: 1141 HGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL 1200

Query: 1201 NSLESATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSS 1260
            NSLESATLD+GKTIRLEHLLLV+NSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSS
Sbjct: 1201 NSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSS 1260

Query: 1261 PGACLVKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLG 1320
            PGAC++KAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLG
Sbjct: 1261 PGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLG 1320

Query: 1321 GQSICEKQNAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSILRKFLTLNDI 1380
            GQS CEKQN KIESLDKN ISEKYSAQL+LKNGGSTIKGLKRLDSVSKSILRKFLTLNDI
Sbjct: 1321 GQSTCEKQNTKIESLDKNTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKFLTLNDI 1380

Query: 1381 QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT 1440
            QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT
Sbjct: 1381 QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT 1440

Query: 1441 RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1487
            RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Sbjct: 1441 RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1483

[Close]

BLAST of PI0019459 vs. ExPASy TrEMBL
Match: A0A5D3D780 (DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00770 PE=4 SV=1)

HSP 1 Score: 2942.9 bits (7628), Expect = 0.0e+00
Identity = 1461/1513 (96.56%), Postives = 1472/1513 (97.29%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            MSSAEDFRPGQKVMIHMEDEQDGELPIPSG LTG+NFSVSNQQDIENIAVITVDAASEVS
Sbjct: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGRLTGINFSVSNQQDIENIAVITVDAASEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI
Sbjct: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120

Query: 121  RQELWGK---------------------VEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKL 180
            RQELWGK                     VEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKL
Sbjct: 121  RQELWGKVRKKMMTLCHRNSSPFEIFIWVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKL 180

Query: 181  STTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTH 240
            STTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTH
Sbjct: 181  STTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTH 240

Query: 241  AQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRA 300
            AQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRA
Sbjct: 241  AQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRA 300

Query: 301  YKKVVDFRGTANELGSRVLDCLKISK------LSPEKLQSKDLVYQQKKIKDTATSSSGL 360
            YKKVVDFRGTANELGSRVLDCLKISK      LSPEKLQSKDLVYQQKKIKDTATSSSGL
Sbjct: 301  YKKVVDFRGTANELGSRVLDCLKISKAIYKIFLSPEKLQSKDLVYQQKKIKDTATSSSGL 360

Query: 361  RWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCY 420
            RWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCY
Sbjct: 361  RWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCY 420

Query: 421  LHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV 480
            LHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV
Sbjct: 421  LHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV 480

Query: 481  KLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRN 540
            KLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRN
Sbjct: 481  KLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRN 540

Query: 541  LLSLSHDSLTAAHLILEDGVSFNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLF 600
            LLSLSHDSLTAAHLILEDGVS NLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLF
Sbjct: 541  LLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLF 600

Query: 601  SILLPPDFDYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQ 660
            SILLPPDF+YSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHC+GKTLDYLRDAQ
Sbjct: 601  SILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQ 660

Query: 661  GVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEIL 720
            GVLCEWLS RGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEIL
Sbjct: 661  GVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEIL 720

Query: 721  TGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTM 780
            TGNDEDNQHLLSIAVE LIYEKQKSAALNQASVDAFKKVFRDIQNLV+KYSGKDNSLLTM
Sbjct: 721  TGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTM 780

Query: 781  FKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQ 840
            FKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQK+PRYIQ+DGLPDRTQ
Sbjct: 781  FKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQ 840

Query: 841  SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG 900
            SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG
Sbjct: 841  SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG 900

Query: 901  TVRNAYGNQLVQFCYGIDTPTSVSSESDSENNNRDRDVGGHPVGSLAACAISEAAYSALD 960
            TVRNAYGNQLVQFCY ID PTSVSSESDSE NNRDRD+GGHPVGSLAACA SEAAYSALD
Sbjct: 901  TVRNAYGNQLVQFCYDIDRPTSVSSESDSE-NNRDRDIGGHPVGSLAACAFSEAAYSALD 960

Query: 961  QPISLLEASPLLNLKRVLECGSKRNSIKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERV 1020
            QPISLLEASPLLNLKRVLECGSKRNS KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERV
Sbjct: 961  QPISLLEASPLLNLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERV 1020

Query: 1021 MFKDIVSSVMITFSPQPSRKKHFSPWVCHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQ 1080
            MFKDIVSSVMI FSPQPSRKKHFSPWVCHFHVCK+ILKKRRLKMNSVIHSLNMRCDSVRQ
Sbjct: 1021 MFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQ 1080

Query: 1081 EGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGT 1140
            EGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGT
Sbjct: 1081 EGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGT 1140

Query: 1141 VIRGFAEIDRVDIAWNDRPKVPKPCCSHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLI 1200
            VIRGFAEIDRVDI WNDRPKVPKP CSHGELYLRVTMSGEGNSRFWATL+NNCLPIMDLI
Sbjct: 1141 VIRGFAEIDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEGNSRFWATLINNCLPIMDLI 1200

Query: 1201 DWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDIGKTIRLEHLLLVANSLSATGEFV 1260
            DWTRSHPDNTHSLCLAYGIDSGWKYFLNSLE ATLDIGKTIRLEHLLLVANSLSATGEFV
Sbjct: 1201 DWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFV 1260

Query: 1261 GLNVKGLTHQREHALVKTPFMQACFSSPGACLVKAAKAGIKDNLSGSLDALAWGRMPSLG 1320
            GLNVKGLTHQREHALVKTPFMQACFSSPGACL+KAAKAGIKDNLSGSLDALAWGRMPSLG
Sbjct: 1261 GLNVKGLTHQREHALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLG 1320

Query: 1321 TGGQFDILYSGKGHELNKPVDVYNLLGGQSICEKQNAKIESLDKNNISEKYSAQLVLKNG 1380
            TGGQFDILYSGKGHELNKPVDVYNLLGGQS CEKQNAKIES+DKNNISEKYSAQLVLKNG
Sbjct: 1321 TGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNG 1380

Query: 1381 GSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALY 1440
            GSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALY
Sbjct: 1381 GSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALY 1440

Query: 1441 FHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV 1487
            FHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV
Sbjct: 1441 FHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV 1500

[Close]

BLAST of PI0019459 vs. ExPASy TrEMBL
Match: A0A1S4DY39 (DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103490982 PE=4 SV=1)

HSP 1 Score: 2924.0 bits (7579), Expect = 0.0e+00
Identity = 1447/1496 (96.72%), Postives = 1460/1496 (97.59%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            MSSAEDFRPGQKVMIHMEDEQDGELPIPSG LTG+NFSVSNQQDIENIAVITVDAASEVS
Sbjct: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGRLTGINFSVSNQQDIENIAVITVDAASEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI
Sbjct: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120

Query: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180
            RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK
Sbjct: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180

Query: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240
            KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA
Sbjct: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240

Query: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300
            IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC
Sbjct: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300

Query: 301  LKISKL----------SPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFR 360
            LKISK            P ++         KKIKDTATSSSGLRWIKDVVLGKRSDHCFR
Sbjct: 301  LKISKAIYKIFVFCLNHPREVTKXRFGLPAKKIKDTATSSSGLRWIKDVVLGKRSDHCFR 360

Query: 361  MVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRL 420
            MVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRL
Sbjct: 361  MVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRL 420

Query: 421  VRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCS 480
            VRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCS
Sbjct: 421  VRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCS 480

Query: 481  PFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILE 540
            PFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILE
Sbjct: 481  PFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILE 540

Query: 541  DGVSFNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNV 600
            DGVS NLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDF+YSSPSHNV
Sbjct: 541  DGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNV 600

Query: 601  FIEKGELISSEGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLS 660
            FIEKGELISSEGSYWLRDSGRNLFQALIEHC+GKTLDYLRDAQGVLCEWLS RGLSVSLS
Sbjct: 601  FIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSMRGLSVSLS 660

Query: 661  DLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVER 720
            DLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVE 
Sbjct: 661  DLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEH 720

Query: 721  LIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSM 780
            LIYEKQKSAALNQASVDAFKKVFRDIQNLV+KYSGKDNSLLTMFKAGSKGNLMKLVQHSM
Sbjct: 721  LIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMFKAGSKGNLMKLVQHSM 780

Query: 781  CLGLQHSLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLN 840
            CLGLQHSLVTLSFSLPHKLSCSAWNSQK+PRYIQ+DGLPDRTQSFIPYAVVENSFLSGLN
Sbjct: 781  CLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLN 840

Query: 841  PFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGI 900
            PFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCY I
Sbjct: 841  PFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDI 900

Query: 901  DTPTSVSSESDSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRV 960
            D PTSVSSESDSE NNRDRD+GGHPVGSLAACA SEAAYSALDQPISLLEASPLLNLKRV
Sbjct: 901  DRPTSVSSESDSE-NNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRV 960

Query: 961  LECGSKRNSIKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQP 1020
            LECGSKRNS KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMI FSPQP
Sbjct: 961  LECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQP 1020

Query: 1021 SRKKHFSPWVCHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCP 1080
            SRKKHFSPWVCHFHVCK+ILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCP
Sbjct: 1021 SRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCP 1080

Query: 1081 LADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWND 1140
            LADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDI WND
Sbjct: 1081 LADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDITWND 1140

Query: 1141 RPKVPKPCCSHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAY 1200
            RPKVPKP CSHGELYLRVTMSGEGNSRFWATL+NNCLPIMDLIDWTRSHPDNTHSLCLAY
Sbjct: 1141 RPKVPKPRCSHGELYLRVTMSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAY 1200

Query: 1201 GIDSGWKYFLNSLESATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVK 1260
            GIDSGWKYFLNSLE ATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVK
Sbjct: 1201 GIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVK 1260

Query: 1261 TPFMQACFSSPGACLVKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELN 1320
            TPFMQACFSSPGACL+KAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELN
Sbjct: 1261 TPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELN 1320

Query: 1321 KPVDVYNLLGGQSICEKQNAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSI 1380
            KPVDVYNLLGGQS CEKQNAKIES+DKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSI
Sbjct: 1321 KPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSI 1380

Query: 1381 LRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIK 1440
            LRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIK
Sbjct: 1381 LRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIK 1440

Query: 1441 VGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1487
            VGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Sbjct: 1441 VGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1495

[Close]

BLAST of PI0019459 vs. ExPASy TrEMBL
Match: A0A6J1FKU9 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111444908 PE=4 SV=1)

HSP 1 Score: 2694.1 bits (6982), Expect = 0.0e+00
Identity = 1319/1487 (88.70%), Postives = 1399/1487 (94.08%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            M+ A  FR GQK M HMEDEQD EL IPSG+L GVNFSVS QQD+ENIAVI ++AA EVS
Sbjct: 1    MNFAGGFRSGQKAMNHMEDEQDSELQIPSGVLVGVNFSVSTQQDMENIAVINIEAACEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGAS LK CEGHFG IKFPYTIIHPYFLSEVAQVLNKVCPGCKSI
Sbjct: 61   DPKLGLPNPSYQCTTCGASVLKCCEGHFGAIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120

Query: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180
            R+ELWGKVEDPTSD++RPKGCRYCFGSLKDWYPPMRFKLSTTDMF+KSMIMVEVKENMSK
Sbjct: 121  RRELWGKVEDPTSDFHRPKGCRYCFGSLKDWYPPMRFKLSTTDMFRKSMIMVEVKENMSK 180

Query: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240
            KYQKRVA+GGLP DYW+FIPKDEQQEESYCRPNRK+LTHAQVHYLLKDIDPKFLKKFV A
Sbjct: 181  KYQKRVARGGLPPDYWNFIPKDEQQEESYCRPNRKVLTHAQVHYLLKDIDPKFLKKFVSA 240

Query: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300
             DSLFLNSFPVTPN HRVTEM HSFS+GQRL+FDERTRAYKK+VDFRGTANELGSRVLDC
Sbjct: 241  TDSLFLNSFPVTPNCHRVTEMTHSFSSGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC 300

Query: 301  LKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360
            LKISKLSPEKL+SKDL+YQQKKIKDTATSS+GLRWIKDVVLGKRSDHCFRMVVVGDPNIE
Sbjct: 301  LKISKLSPEKLESKDLIYQQKKIKDTATSSNGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360

Query: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN 420
            LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYL LVEKGEI+VRREGRLVRVR+VLEL+
Sbjct: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLRLVEKGEIFVRREGRLVRVRHVLELS 420

Query: 421  MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC 480
            MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV++LPVS+VLSLNPLCCSPFRGDFDGDC
Sbjct: 421  MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVRVLPVSSVLSLNPLCCSPFRGDFDGDC 480

Query: 481  LHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQM 540
            LHGYVPQSLEARVE+RELV+LDRQL+NGQSGRNLLSLSHDSLTAAHLI+EDGVS NLFQ+
Sbjct: 481  LHGYVPQSLEARVELRELVALDRQLVNGQSGRNLLSLSHDSLTAAHLIMEDGVSLNLFQI 540

Query: 541  QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS 600
            QQLQM  LHQLLPPAIVK+P  R+CAWTGKQLFSI LPPDFDYSSPSH V I+ GEL+SS
Sbjct: 541  QQLQMFALHQLLPPAIVKAPSFRSCAWTGKQLFSIFLPPDFDYSSPSHRVHIKNGELLSS 600

Query: 601  EGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS 660
            EGSYWLRD+GRN FQALIEHC+G+TL+YL  AQ VLCEWLS RGLSVSLSDLYLSVDS+S
Sbjct: 601  EGSYWLRDTGRNPFQALIEHCEGRTLNYLHIAQRVLCEWLSMRGLSVSLSDLYLSVDSHS 660

Query: 661  HKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAA 720
            HKNMMDDIFCGLQEAEETCNL QLMVDSHK++LTG+DE NQH+LSI VE L YEKQKSAA
Sbjct: 661  HKNMMDDIFCGLQEAEETCNLIQLMVDSHKDVLTGDDEGNQHVLSIEVEHLSYEKQKSAA 720

Query: 721  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT 780
            LNQASVDAFK+VFR+IQNLVYKYSGKDNSLLTMFKAGSKGNL+KLVQHSMCLGLQHSLVT
Sbjct: 721  LNQASVDAFKRVFREIQNLVYKYSGKDNSLLTMFKAGSKGNLLKLVQHSMCLGLQHSLVT 780

Query: 781  LSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840
            LSF LPHKLSCS+WNSQK+PRYIQKDGL DRTQSFIPYAVVENSFLSGLNPFECFAHSVT
Sbjct: 781  LSFGLPHKLSCSSWNSQKMPRYIQKDGLADRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840

Query: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSES 900
            NRDSSFSDNAEVPGTLTRKLTFLMRDIY AYD TVRNAYGNQLVQF Y  D+P S S+E 
Sbjct: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYNAYDRTVRNAYGNQLVQFSYDTDSPMSTSNEL 900

Query: 901  DSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSI 960
            D ENNN +RD+GG PVGSLAACA+SEAAYSALDQPISLLE SPLLNLK+VLECGSKRNS 
Sbjct: 901  DGENNNTNRDIGGQPVGSLAACALSEAAYSALDQPISLLETSPLLNLKKVLECGSKRNSP 960

Query: 961  KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWV 1020
            KQTFSLFL EKLSKRSYGFEYGALGVKNHLERV+FKDIVSSVMI F+P+PSRK+HFSPWV
Sbjct: 961  KQTFSLFLLEKLSKRSYGFEYGALGVKNHLERVIFKDIVSSVMIIFAPEPSRKRHFSPWV 1020

Query: 1021 CHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGD 1080
            CHFHVCKEILKKRRLK++SVIHSLNMRCDSVRQE ++NLP L I TQDC LADS  EDGD
Sbjct: 1021 CHFHVCKEILKKRRLKISSVIHSLNMRCDSVRQEAKINLPFLHISTQDCSLADSSREDGD 1080

Query: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKP-CC 1140
            TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEID+VDI+WNDRPKVPKP C 
Sbjct: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDKVDISWNDRPKVPKPHCK 1140

Query: 1141 SHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYF 1200
            SHGELYLRVTMSGEGNSRFWATLMN+CLPIMDLIDW+RSHPDN HS C+AYGIDSG  YF
Sbjct: 1141 SHGELYLRVTMSGEGNSRFWATLMNHCLPIMDLIDWSRSHPDNIHSFCMAYGIDSGRNYF 1200

Query: 1201 LNSLESATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFS 1260
            LNSLESATLDIGKTIR EHLLLVAN+LSATGEFVGLNVKG++ QREHALVKTPFMQACFS
Sbjct: 1201 LNSLESATLDIGKTIRHEHLLLVANTLSATGEFVGLNVKGVSRQREHALVKTPFMQACFS 1260

Query: 1261 SPGACLVKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLL 1320
            SPGA  VKAAKAGIKD+LSGSLDALAWG++PS+GTGGQFDILYSGKGHELNKPVDVYNLL
Sbjct: 1261 SPGASFVKAAKAGIKDSLSGSLDALAWGKIPSMGTGGQFDILYSGKGHELNKPVDVYNLL 1320

Query: 1321 GGQSICEKQNAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSILRKFLTLND 1380
            G Q ICEK N KIESLDKN I EKYSA +V KNGGSTIKGLK+LDSVSKSILR+FLTLND
Sbjct: 1321 GSQGICEKPNVKIESLDKNTIYEKYSA-VVHKNGGSTIKGLKKLDSVSKSILREFLTLND 1380

Query: 1381 IQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQN 1440
            IQKLS  LR+IL KYSLNERLNEVDKSTLMMALYFHP RDEKIGVGAQDIKVGSHSKY N
Sbjct: 1381 IQKLSHTLRSILRKYSLNERLNEVDKSTLMMALYFHPQRDEKIGVGAQDIKVGSHSKYSN 1440

Query: 1441 TRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1487
            TRCF+L+RSDGTTEDFSYHKCVLGALEIIAPHRVK YQSKWMQ+KFE
Sbjct: 1441 TRCFILVRSDGTTEDFSYHKCVLGALEIIAPHRVKAYQSKWMQDKFE 1486

[Close]

BLAST of PI0019459 vs. ExPASy TrEMBL
Match: A0A6J1KSL8 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111498320 PE=4 SV=1)

HSP 1 Score: 2691.4 bits (6975), Expect = 0.0e+00
Identity = 1317/1487 (88.57%), Postives = 1399/1487 (94.08%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            M+ A  FR GQK M HMEDEQD EL IPSG+L GVNFSVS QQD+ENIAVI ++AA EVS
Sbjct: 1    MNFAGGFRSGQKAMNHMEDEQDSELQIPSGVLVGVNFSVSTQQDMENIAVINIEAACEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGAS LK CEGHFG IKFPYTIIHPYFLSEVAQVLNKVCPGCKSI
Sbjct: 61   DPKLGLPNPSYQCTTCGASVLKCCEGHFGAIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120

Query: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180
            R+ELWGKVEDPTSD++RPKGCRYCFGSLKDWYPPMRFKLSTTDMF+KSMIMVEVKENMSK
Sbjct: 121  RRELWGKVEDPTSDFHRPKGCRYCFGSLKDWYPPMRFKLSTTDMFRKSMIMVEVKENMSK 180

Query: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240
            KYQKRVA+GGLP DYW+FIPKDEQQEESYCRPNRK+LTHAQVHYLLKDIDPKFLKKFV A
Sbjct: 181  KYQKRVARGGLPPDYWNFIPKDEQQEESYCRPNRKVLTHAQVHYLLKDIDPKFLKKFVSA 240

Query: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300
             DSLFLNSFPVTPN HRVTEM HSFS+GQRL+FDERTRAYKK+VDFRGTANELGSRVLDC
Sbjct: 241  TDSLFLNSFPVTPNCHRVTEMTHSFSSGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC 300

Query: 301  LKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360
            LKISKLSPEKL+SKDL+YQQKKIKDTATSS+GLRWIKDVVLGKRSDHCFRMVVVGDPNIE
Sbjct: 301  LKISKLSPEKLESKDLIYQQKKIKDTATSSNGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360

Query: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN 420
            LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYL LVEKGEI+VRREGRLVRVR+VLEL+
Sbjct: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLRLVEKGEIFVRREGRLVRVRHVLELS 420

Query: 421  MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC 480
            MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV++LPVS+VLSLNPLCCSPFRGDFDGDC
Sbjct: 421  MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVRVLPVSSVLSLNPLCCSPFRGDFDGDC 480

Query: 481  LHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQM 540
            LHGYVPQSLEARVE+RELV+LDRQL+NGQSGRNLLSLSHDSLTAAHLI+EDGVS NLFQ+
Sbjct: 481  LHGYVPQSLEARVELRELVALDRQLVNGQSGRNLLSLSHDSLTAAHLIMEDGVSLNLFQI 540

Query: 541  QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS 600
            QQLQM  LHQLLPPAIVK+P  R+CAWTGKQLFSI LPPDFDYSSPSH V I+ GEL+SS
Sbjct: 541  QQLQMFALHQLLPPAIVKAPSFRSCAWTGKQLFSIFLPPDFDYSSPSHRVHIKNGELLSS 600

Query: 601  EGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS 660
            EGSYWLRD+GRN FQALIEHC+G TL+YL  AQ VLCEWLS RGLSVSLSDLYLSVDS+S
Sbjct: 601  EGSYWLRDTGRNPFQALIEHCEGMTLNYLHIAQRVLCEWLSMRGLSVSLSDLYLSVDSHS 660

Query: 661  HKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAA 720
            HKNMMDDIFCGLQEAEETCNL QLMVDSHK+ LTG+DE NQH+LSI VE L YEKQKSAA
Sbjct: 661  HKNMMDDIFCGLQEAEETCNLIQLMVDSHKDALTGDDEGNQHVLSIEVEHLSYEKQKSAA 720

Query: 721  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT 780
            LNQASVDAFK+VFR+IQNLVYKYSGKDNSLLTMFKAGSKGNL+KLVQHSMCLGLQHSLVT
Sbjct: 721  LNQASVDAFKRVFREIQNLVYKYSGKDNSLLTMFKAGSKGNLLKLVQHSMCLGLQHSLVT 780

Query: 781  LSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840
            LSF LPHKLSCS+WNSQK+PRYI+KDGL DRTQSFIPYAVVENSFLSGLNPFECFAHSVT
Sbjct: 781  LSFGLPHKLSCSSWNSQKMPRYIRKDGLADRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840

Query: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSES 900
            NRDSSFSDNAEVPGTLTRKLTFLMRDIY AYDGTVRNAYGNQLVQF Y  D+PTS+S+E 
Sbjct: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYNAYDGTVRNAYGNQLVQFSYDTDSPTSISNEL 900

Query: 901  DSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSI 960
            D ENNN +RD+GG PVGSLAACAISEAAYSALDQPISLLE SPLLNLK+VLECGSKRNS 
Sbjct: 901  DGENNNTNRDIGGQPVGSLAACAISEAAYSALDQPISLLETSPLLNLKKVLECGSKRNSP 960

Query: 961  KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWV 1020
            KQ FSLFL EKLSKRSYG+EYGALGVKNHLERV+FKDIVSSVMI F+P+PSRK+HFSPWV
Sbjct: 961  KQIFSLFLLEKLSKRSYGYEYGALGVKNHLERVIFKDIVSSVMIIFAPEPSRKRHFSPWV 1020

Query: 1021 CHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGD 1080
            CHFHVCKEILKKRRLK++SVIHSLNMRCDS+RQE ++NLP L I TQDC LADS  EDGD
Sbjct: 1021 CHFHVCKEILKKRRLKISSVIHSLNMRCDSMRQEAKINLPFLHISTQDCSLADSSREDGD 1080

Query: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKP-CC 1140
            TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEID+VDI+WNDRPKVPKP C 
Sbjct: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDKVDISWNDRPKVPKPHCK 1140

Query: 1141 SHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYF 1200
            SHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDW+RSHPDN HS C+AYGIDSG  YF
Sbjct: 1141 SHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWSRSHPDNIHSFCMAYGIDSGRNYF 1200

Query: 1201 LNSLESATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFS 1260
            LNSLESATLDIGKTIR EHLLLVAN+LSATGEFVGLNVKG++ QREHALVKTPFMQACFS
Sbjct: 1201 LNSLESATLDIGKTIRHEHLLLVANTLSATGEFVGLNVKGVSRQREHALVKTPFMQACFS 1260

Query: 1261 SPGACLVKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLL 1320
            SPGA  VKAAKAGIKD+LSGSLDALAWG++PS+GTGGQFDILYSGKGHEL+KPVDVYNLL
Sbjct: 1261 SPGASFVKAAKAGIKDSLSGSLDALAWGKIPSMGTGGQFDILYSGKGHELSKPVDVYNLL 1320

Query: 1321 GGQSICEKQNAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSILRKFLTLND 1380
            G Q ICEK N K+ESLDKN I EKYSA +V KNGGSTIKGLK+LDSVSKSILR+FLTLND
Sbjct: 1321 GSQGICEKPNVKMESLDKNTIYEKYSA-VVHKNGGSTIKGLKKLDSVSKSILREFLTLND 1380

Query: 1381 IQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQN 1440
            IQKLS  LR+IL KYSLNERLNEVDKSTLMMALYFHP RDEKIGVGAQDIKVGSHSKY N
Sbjct: 1381 IQKLSHTLRSILRKYSLNERLNEVDKSTLMMALYFHPQRDEKIGVGAQDIKVGSHSKYSN 1440

Query: 1441 TRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1487
            TRCF+L+RSDGTTEDFSYHKCVLGALEIIAPHRVK YQSKWMQ+KFE
Sbjct: 1441 TRCFILVRSDGTTEDFSYHKCVLGALEIIAPHRVKAYQSKWMQDKFE 1486

[Close]

BLAST of PI0019459 vs. NCBI nr
Match: XP_011650447.1 (DNA-directed RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus] >XP_011650449.1 DNA-directed RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus] >KGN55963.1 hypothetical protein Csa_010842 [Cucumis sativus])

HSP 1 Score: 2947.5 bits (7640), Expect = 0.0e+00
Identity = 1449/1486 (97.51%), Postives = 1467/1486 (98.72%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            MSS EDFRPGQKVMIHMEDEQDGELPIPSGLLTG+NFSVSNQQDIENIAVITVDAA+EVS
Sbjct: 1    MSSVEDFRPGQKVMIHMEDEQDGELPIPSGLLTGINFSVSNQQDIENIAVITVDAANEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKS+
Sbjct: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSV 120

Query: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180
            RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK
Sbjct: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180

Query: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240
            KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA
Sbjct: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240

Query: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300
            IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC
Sbjct: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300

Query: 301  LKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360
            LKISKLSPEKLQ+KDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE
Sbjct: 301  LKISKLSPEKLQNKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360

Query: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN 420
            LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN
Sbjct: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN 420

Query: 421  MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC 480
            MGDTIYRPLADGD+VLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC
Sbjct: 421  MGDTIYRPLADGDIVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC 480

Query: 481  LHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQM 540
            LHGYVPQSLEARVEVRELVSLD+QL NGQSGRNLLSLSHDSLTAAHLILEDGVS NLFQM
Sbjct: 481  LHGYVPQSLEARVEVRELVSLDKQLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQM 540

Query: 541  QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS 600
            QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS
Sbjct: 541  QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS 600

Query: 601  EGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS 660
            EGSYWLRDSGRNLFQALIEHC+GKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS
Sbjct: 601  EGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS 660

Query: 661  HKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAA 720
            H+NMMDDIFCGLQEAEETCNLKQLMVDSHKEIL GNDEDNQHLLSIAVERLIYEKQKSAA
Sbjct: 661  HENMMDDIFCGLQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIYEKQKSAA 720

Query: 721  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT 780
            LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT
Sbjct: 721  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT 780

Query: 781  LSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840
            LSFSLPHKLSC+AWNSQK+PRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT
Sbjct: 781  LSFSLPHKLSCAAWNSQKMPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840

Query: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSES 900
            NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCY ID PT   SES
Sbjct: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPT---SES 900

Query: 901  DSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSI 960
            +SENNNRDR +GGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNS 
Sbjct: 901  ESENNNRDRGIGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNST 960

Query: 961  KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWV 1020
            KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMI FSP PSRKKHFSPWV
Sbjct: 961  KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPLPSRKKHFSPWV 1020

Query: 1021 CHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGD 1080
            CHFHVCKEILKKRRLKMNSVIHSLNMRCDS+RQEGRMNLPSLQIITQDCPLADSLTEDGD
Sbjct: 1021 CHFHVCKEILKKRRLKMNSVIHSLNMRCDSMRQEGRMNLPSLQIITQDCPLADSLTEDGD 1080

Query: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPCCS 1140
            TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGF EIDRVDI WNDRPKVPKP CS
Sbjct: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFTEIDRVDITWNDRPKVPKPRCS 1140

Query: 1141 HGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL 1200
            HGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL
Sbjct: 1141 HGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL 1200

Query: 1201 NSLESATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSS 1260
            NSLESATLD+GKTIRLEHLLLV+NSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSS
Sbjct: 1201 NSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSS 1260

Query: 1261 PGACLVKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLG 1320
            PGAC++KAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLG
Sbjct: 1261 PGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLG 1320

Query: 1321 GQSICEKQNAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSILRKFLTLNDI 1380
            GQS CEKQN KIESLDKN ISEKYSAQL+LKNGGSTIKGLKRLDSVSKSILRKFLTLNDI
Sbjct: 1321 GQSTCEKQNTKIESLDKNTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKFLTLNDI 1380

Query: 1381 QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT 1440
            QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT
Sbjct: 1381 QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT 1440

Query: 1441 RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1487
            RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Sbjct: 1441 RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1483

[Close]

BLAST of PI0019459 vs. NCBI nr
Match: TYK19428.1 (DNA-directed RNA polymerase IV subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 2942.9 bits (7628), Expect = 0.0e+00
Identity = 1461/1513 (96.56%), Postives = 1472/1513 (97.29%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            MSSAEDFRPGQKVMIHMEDEQDGELPIPSG LTG+NFSVSNQQDIENIAVITVDAASEVS
Sbjct: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGRLTGINFSVSNQQDIENIAVITVDAASEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI
Sbjct: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120

Query: 121  RQELWGK---------------------VEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKL 180
            RQELWGK                     VEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKL
Sbjct: 121  RQELWGKVRKKMMTLCHRNSSPFEIFIWVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKL 180

Query: 181  STTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTH 240
            STTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTH
Sbjct: 181  STTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTH 240

Query: 241  AQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRA 300
            AQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRA
Sbjct: 241  AQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRA 300

Query: 301  YKKVVDFRGTANELGSRVLDCLKISK------LSPEKLQSKDLVYQQKKIKDTATSSSGL 360
            YKKVVDFRGTANELGSRVLDCLKISK      LSPEKLQSKDLVYQQKKIKDTATSSSGL
Sbjct: 301  YKKVVDFRGTANELGSRVLDCLKISKAIYKIFLSPEKLQSKDLVYQQKKIKDTATSSSGL 360

Query: 361  RWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCY 420
            RWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCY
Sbjct: 361  RWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCY 420

Query: 421  LHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV 480
            LHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV
Sbjct: 421  LHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV 480

Query: 481  KLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRN 540
            KLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRN
Sbjct: 481  KLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRN 540

Query: 541  LLSLSHDSLTAAHLILEDGVSFNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLF 600
            LLSLSHDSLTAAHLILEDGVS NLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLF
Sbjct: 541  LLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLF 600

Query: 601  SILLPPDFDYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQ 660
            SILLPPDF+YSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHC+GKTLDYLRDAQ
Sbjct: 601  SILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQ 660

Query: 661  GVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEIL 720
            GVLCEWLS RGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEIL
Sbjct: 661  GVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEIL 720

Query: 721  TGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTM 780
            TGNDEDNQHLLSIAVE LIYEKQKSAALNQASVDAFKKVFRDIQNLV+KYSGKDNSLLTM
Sbjct: 721  TGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTM 780

Query: 781  FKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQ 840
            FKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQK+PRYIQ+DGLPDRTQ
Sbjct: 781  FKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQ 840

Query: 841  SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG 900
            SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG
Sbjct: 841  SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG 900

Query: 901  TVRNAYGNQLVQFCYGIDTPTSVSSESDSENNNRDRDVGGHPVGSLAACAISEAAYSALD 960
            TVRNAYGNQLVQFCY ID PTSVSSESDSE NNRDRD+GGHPVGSLAACA SEAAYSALD
Sbjct: 901  TVRNAYGNQLVQFCYDIDRPTSVSSESDSE-NNRDRDIGGHPVGSLAACAFSEAAYSALD 960

Query: 961  QPISLLEASPLLNLKRVLECGSKRNSIKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERV 1020
            QPISLLEASPLLNLKRVLECGSKRNS KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERV
Sbjct: 961  QPISLLEASPLLNLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERV 1020

Query: 1021 MFKDIVSSVMITFSPQPSRKKHFSPWVCHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQ 1080
            MFKDIVSSVMI FSPQPSRKKHFSPWVCHFHVCK+ILKKRRLKMNSVIHSLNMRCDSVRQ
Sbjct: 1021 MFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQ 1080

Query: 1081 EGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGT 1140
            EGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGT
Sbjct: 1081 EGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGT 1140

Query: 1141 VIRGFAEIDRVDIAWNDRPKVPKPCCSHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLI 1200
            VIRGFAEIDRVDI WNDRPKVPKP CSHGELYLRVTMSGEGNSRFWATL+NNCLPIMDLI
Sbjct: 1141 VIRGFAEIDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEGNSRFWATLINNCLPIMDLI 1200

Query: 1201 DWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDIGKTIRLEHLLLVANSLSATGEFV 1260
            DWTRSHPDNTHSLCLAYGIDSGWKYFLNSLE ATLDIGKTIRLEHLLLVANSLSATGEFV
Sbjct: 1201 DWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFV 1260

Query: 1261 GLNVKGLTHQREHALVKTPFMQACFSSPGACLVKAAKAGIKDNLSGSLDALAWGRMPSLG 1320
            GLNVKGLTHQREHALVKTPFMQACFSSPGACL+KAAKAGIKDNLSGSLDALAWGRMPSLG
Sbjct: 1261 GLNVKGLTHQREHALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLG 1320

Query: 1321 TGGQFDILYSGKGHELNKPVDVYNLLGGQSICEKQNAKIESLDKNNISEKYSAQLVLKNG 1380
            TGGQFDILYSGKGHELNKPVDVYNLLGGQS CEKQNAKIES+DKNNISEKYSAQLVLKNG
Sbjct: 1321 TGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNG 1380

Query: 1381 GSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALY 1440
            GSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALY
Sbjct: 1381 GSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALY 1440

Query: 1441 FHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV 1487
            FHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV
Sbjct: 1441 FHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV 1500

[Close]

BLAST of PI0019459 vs. NCBI nr
Match: XP_016900630.1 (PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV subunit 1 [Cucumis melo])

HSP 1 Score: 2924.0 bits (7579), Expect = 0.0e+00
Identity = 1447/1496 (96.72%), Postives = 1460/1496 (97.59%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            MSSAEDFRPGQKVMIHMEDEQDGELPIPSG LTG+NFSVSNQQDIENIAVITVDAASEVS
Sbjct: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGRLTGINFSVSNQQDIENIAVITVDAASEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI
Sbjct: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120

Query: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180
            RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK
Sbjct: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180

Query: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240
            KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA
Sbjct: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240

Query: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300
            IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC
Sbjct: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300

Query: 301  LKISKL----------SPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFR 360
            LKISK            P ++         KKIKDTATSSSGLRWIKDVVLGKRSDHCFR
Sbjct: 301  LKISKAIYKIFVFCLNHPREVTKXRFGLPAKKIKDTATSSSGLRWIKDVVLGKRSDHCFR 360

Query: 361  MVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRL 420
            MVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRL
Sbjct: 361  MVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRL 420

Query: 421  VRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCS 480
            VRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCS
Sbjct: 421  VRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCS 480

Query: 481  PFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILE 540
            PFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILE
Sbjct: 481  PFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILE 540

Query: 541  DGVSFNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNV 600
            DGVS NLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDF+YSSPSHNV
Sbjct: 541  DGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNV 600

Query: 601  FIEKGELISSEGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLS 660
            FIEKGELISSEGSYWLRDSGRNLFQALIEHC+GKTLDYLRDAQGVLCEWLS RGLSVSLS
Sbjct: 601  FIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSMRGLSVSLS 660

Query: 661  DLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVER 720
            DLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVE 
Sbjct: 661  DLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEH 720

Query: 721  LIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSM 780
            LIYEKQKSAALNQASVDAFKKVFRDIQNLV+KYSGKDNSLLTMFKAGSKGNLMKLVQHSM
Sbjct: 721  LIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMFKAGSKGNLMKLVQHSM 780

Query: 781  CLGLQHSLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLN 840
            CLGLQHSLVTLSFSLPHKLSCSAWNSQK+PRYIQ+DGLPDRTQSFIPYAVVENSFLSGLN
Sbjct: 781  CLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLN 840

Query: 841  PFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGI 900
            PFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCY I
Sbjct: 841  PFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDI 900

Query: 901  DTPTSVSSESDSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRV 960
            D PTSVSSESDSE NNRDRD+GGHPVGSLAACA SEAAYSALDQPISLLEASPLLNLKRV
Sbjct: 901  DRPTSVSSESDSE-NNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRV 960

Query: 961  LECGSKRNSIKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQP 1020
            LECGSKRNS KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMI FSPQP
Sbjct: 961  LECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQP 1020

Query: 1021 SRKKHFSPWVCHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCP 1080
            SRKKHFSPWVCHFHVCK+ILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCP
Sbjct: 1021 SRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCP 1080

Query: 1081 LADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWND 1140
            LADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDI WND
Sbjct: 1081 LADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDITWND 1140

Query: 1141 RPKVPKPCCSHGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAY 1200
            RPKVPKP CSHGELYLRVTMSGEGNSRFWATL+NNCLPIMDLIDWTRSHPDNTHSLCLAY
Sbjct: 1141 RPKVPKPRCSHGELYLRVTMSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAY 1200

Query: 1201 GIDSGWKYFLNSLESATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVK 1260
            GIDSGWKYFLNSLE ATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVK
Sbjct: 1201 GIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVK 1260

Query: 1261 TPFMQACFSSPGACLVKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELN 1320
            TPFMQACFSSPGACL+KAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELN
Sbjct: 1261 TPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELN 1320

Query: 1321 KPVDVYNLLGGQSICEKQNAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSI 1380
            KPVDVYNLLGGQS CEKQNAKIES+DKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSI
Sbjct: 1321 KPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSI 1380

Query: 1381 LRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIK 1440
            LRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIK
Sbjct: 1381 LRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIK 1440

Query: 1441 VGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1487
            VGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Sbjct: 1441 VGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1495

[Close]

BLAST of PI0019459 vs. NCBI nr
Match: XP_038905038.1 (DNA-directed RNA polymerase IV subunit 1 isoform X1 [Benincasa hispida] >XP_038905039.1 DNA-directed RNA polymerase IV subunit 1 isoform X1 [Benincasa hispida] >XP_038905040.1 DNA-directed RNA polymerase IV subunit 1 isoform X1 [Benincasa hispida] >XP_038905041.1 DNA-directed RNA polymerase IV subunit 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 2879.4 bits (7463), Expect = 0.0e+00
Identity = 1410/1486 (94.89%), Postives = 1452/1486 (97.71%), Query Frame = 0


Query: 1    MSSAEDFRPGQKVMIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVS 60
            MS A DF+P QKVMIHMEDEQDGELPIPSGLLTG+NFSV+ QQD ENIAV+TVDAASEVS
Sbjct: 1    MSFAGDFQPEQKVMIHMEDEQDGELPIPSGLLTGINFSVATQQDTENIAVLTVDAASEVS 60

Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120
            DPKLGLPNPSYQCTTCGASSLK CEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI
Sbjct: 61   DPKLGLPNPSYQCTTCGASSLKSCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI 120

Query: 121  RQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSK 180
            RQELWGKVEDPTSDY+RPKGCRYCFGSLKDWYPPMRFKLSTTDMF+KSMIMVEVKENMSK
Sbjct: 121  RQELWGKVEDPTSDYHRPKGCRYCFGSLKDWYPPMRFKLSTTDMFRKSMIMVEVKENMSK 180

Query: 181  KYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240
            KYQK+VAKGGLPSDYW+FIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA
Sbjct: 181  KYQKKVAKGGLPSDYWNFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA 240

Query: 241  IDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDC 300
             DSLFLNSFPVTPNSHRVTE+ HSFSNGQRLIFDERTRAYKKVVDFRGTANELGSR+LDC
Sbjct: 241  TDSLFLNSFPVTPNSHRVTELTHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRILDC 300

Query: 301  LKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360
            LKISKLSPEKLQSKDLVYQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIE
Sbjct: 301  LKISKLSPEKLQSKDLVYQQKKIKDTATSSYGLRWIKDVVLGKRSDHCFRMVVVGDPNIE 360

Query: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELN 420
            LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYL+LV KGEI+VRREGRLVRVRNVLELN
Sbjct: 361  LSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLNLVVKGEIFVRREGRLVRVRNVLELN 420

Query: 421  MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDC 480
            MGDTIYRPLADGDVVLVNRPPSIHQHSLIAL VKLLPVS+VLSLNPLCCSPFRGDFDGDC
Sbjct: 421  MGDTIYRPLADGDVVLVNRPPSIHQHSLIALYVKLLPVSSVLSLNPLCCSPFRGDFDGDC 480

Query: 481  LHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQM 540
            LHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI+EDGVS N FQM
Sbjct: 481  LHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNAFQM 540

Query: 541  QQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISS 600
            QQLQML LHQLLPPAIVK+PL RNCAWTGKQLFSILLPPDFDYSSPSHNVFI+ GELISS
Sbjct: 541  QQLQMLALHQLLPPAIVKAPLFRNCAWTGKQLFSILLPPDFDYSSPSHNVFIKNGELISS 600

Query: 601  EGSYWLRDSGRNLFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYS 660
            EGSYWLRDSGRNLFQALIEHC+GKTLDYL DAQGVLCEWLS RGLSVSLSDLYLSVDS+S
Sbjct: 601  EGSYWLRDSGRNLFQALIEHCEGKTLDYLHDAQGVLCEWLSMRGLSVSLSDLYLSVDSHS 660

Query: 661  HKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAA 720
            HKNMMDDIFCGLQEAEETCNLKQLMVDSHK+ILTGNDEDNQH+LSI +ERLIYEKQKS A
Sbjct: 661  HKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILTGNDEDNQHMLSIEMERLIYEKQKSVA 720

Query: 721  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT 780
            LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNL+KLVQHSMCLGLQHSLV 
Sbjct: 721  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLLKLVQHSMCLGLQHSLVF 780

Query: 781  LSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840
            LSFSLPHKLSCSAWNSQK+PRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT
Sbjct: 781  LSFSLPHKLSCSAWNSQKMPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 840

Query: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSES 900
            NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQF Y ID PTSVS+E 
Sbjct: 841  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFSYDIDRPTSVSNEL 900

Query: 901  DSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSI 960
            DSENNN+DRD+GGHPVGSLAACA+SEAAYSALDQPISLLEASPLLNLKRVLECGSKRNS 
Sbjct: 901  DSENNNKDRDIGGHPVGSLAACAMSEAAYSALDQPISLLEASPLLNLKRVLECGSKRNST 960

Query: 961  KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWV 1020
            KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVS+VMI FSPQPSRKKHFSPWV
Sbjct: 961  KQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSTVMIIFSPQPSRKKHFSPWV 1020

Query: 1021 CHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGD 1080
            CHFHVCKEILKKRRLKMNSVIHSLN+RCDSVRQEGRMNLPSLQII+QDCPLADS+ EDGD
Sbjct: 1021 CHFHVCKEILKKRRLKMNSVIHSLNIRCDSVRQEGRMNLPSLQIISQDCPLADSVREDGD 1080

Query: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPCCS 1140
            TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKP C+
Sbjct: 1081 TVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPRCN 1140

Query: 1141 HGELYLRVTMSGEGNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL 1200
            HGELYLRVTMSGEGNSRFWATL+NNCLP+MDLIDW+RSHPDNTHSLCLAYGIDSGWKYFL
Sbjct: 1141 HGELYLRVTMSGEGNSRFWATLVNNCLPVMDLIDWSRSHPDNTHSLCLAYGIDSGWKYFL 1200

Query: 1201 NSLESATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSS 1260
            NSL SATLDIGKTIRLEHLLL+ANSLSATGEFVGLNVKGL+HQREHALVKTPFMQACFSS
Sbjct: 1201 NSLVSATLDIGKTIRLEHLLLIANSLSATGEFVGLNVKGLSHQREHALVKTPFMQACFSS 1260

Query: 1261 PGACLVKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLG 1320
            PGAC VKAAKAG KDNLSGSLDALAWGR+PSLGTGGQFDILYSG+GHELNKPVDVYNLLG
Sbjct: 1261 PGACFVKAAKAGSKDNLSGSLDALAWGRIPSLGTGGQFDILYSGRGHELNKPVDVYNLLG 1320

Query: 1321 GQSICEKQNAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSILRKFLTLNDI 1380
            GQS CEKQNAKI SLDKNNISEKYSAQLVLKNGGSTIKGLK+LD+VSKSILR+FLTLNDI
Sbjct: 1321 GQSTCEKQNAKIGSLDKNNISEKYSAQLVLKNGGSTIKGLKKLDNVSKSILREFLTLNDI 1380

Query: 1381 QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT 1440
            QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT
Sbjct: 1381 QKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNT 1440

Query: 1441 RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1487
            RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Sbjct: 1441 RCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1486

[Close]

BLAST of PI0019459 vs. NCBI nr
Match: XP_038905042.1 (DNA-directed RNA polymerase IV subunit 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 2863.9 bits (7423), Expect = 0.0e+00
Identity = 1401/1473 (95.11%), Postives = 1442/1473 (97.90%), Query Frame = 0


Query: 14   MIHMEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVSDPKLGLPNPSYQC 73
            MIHMEDEQDGELPIPSGLLTG+NFSV+ QQD ENIAV+TVDAASEVSDPKLGLPNPSYQC
Sbjct: 1    MIHMEDEQDGELPIPSGLLTGINFSVATQQDTENIAVLTVDAASEVSDPKLGLPNPSYQC 60

Query: 74   TTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTS 133
            TTCGASSLK CEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTS
Sbjct: 61   TTCGASSLKSCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTS 120

Query: 134  DYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPS 193
            DY+RPKGCRYCFGSLKDWYPPMRFKLSTTDMF+KSMIMVEVKENMSKKYQK+VAKGGLPS
Sbjct: 121  DYHRPKGCRYCFGSLKDWYPPMRFKLSTTDMFRKSMIMVEVKENMSKKYQKKVAKGGLPS 180

Query: 194  DYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTP 253
            DYW+FIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPA DSLFLNSFPVTP
Sbjct: 181  DYWNFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPATDSLFLNSFPVTP 240

Query: 254  NSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKLQS 313
            NSHRVTE+ HSFSNGQRLIFDERTRAYKKVVDFRGTANELGSR+LDCLKISKLSPEKLQS
Sbjct: 241  NSHRVTELTHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRILDCLKISKLSPEKLQS 300

Query: 314  KDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAER 373
            KDLVYQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAER
Sbjct: 301  KDLVYQQKKIKDTATSSYGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAER 360

Query: 374  LQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGD 433
            LQISEHLSSWNMKKLSTSCYL+LV KGEI+VRREGRLVRVRNVLELNMGDTIYRPLADGD
Sbjct: 361  LQISEHLSSWNMKKLSTSCYLNLVVKGEIFVRREGRLVRVRNVLELNMGDTIYRPLADGD 420

Query: 434  VVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARV 493
            VVLVNRPPSIHQHSLIAL VKLLPVS+VLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARV
Sbjct: 421  VVLVNRPPSIHQHSLIALYVKLLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARV 480

Query: 494  EVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSFNLFQMQQLQMLTLHQLLP 553
            EVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI+EDGVS N FQMQQLQML LHQLLP
Sbjct: 481  EVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNAFQMQQLQMLALHQLLP 540

Query: 554  PAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISSEGSYWLRDSGRNL 613
            PAIVK+PL RNCAWTGKQLFSILLPPDFDYSSPSHNVFI+ GELISSEGSYWLRDSGRNL
Sbjct: 541  PAIVKAPLFRNCAWTGKQLFSILLPPDFDYSSPSHNVFIKNGELISSEGSYWLRDSGRNL 600

Query: 614  FQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQ 673
            FQALIEHC+GKTLDYL DAQGVLCEWLS RGLSVSLSDLYLSVDS+SHKNMMDDIFCGLQ
Sbjct: 601  FQALIEHCEGKTLDYLHDAQGVLCEWLSMRGLSVSLSDLYLSVDSHSHKNMMDDIFCGLQ 660

Query: 674  EAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVF 733
            EAEETCNLKQLMVDSHK+ILTGNDEDNQH+LSI +ERLIYEKQKS ALNQASVDAFKKVF
Sbjct: 661  EAEETCNLKQLMVDSHKDILTGNDEDNQHMLSIEMERLIYEKQKSVALNQASVDAFKKVF 720

Query: 734  RDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSA 793
            RDIQNLVYKYSGKDNSLLTMFKAGSKGNL+KLVQHSMCLGLQHSLV LSFSLPHKLSCSA
Sbjct: 721  RDIQNLVYKYSGKDNSLLTMFKAGSKGNLLKLVQHSMCLGLQHSLVFLSFSLPHKLSCSA 780

Query: 794  WNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVP 853
            WNSQK+PRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVP
Sbjct: 781  WNSQKMPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVP 840

Query: 854  GTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSESDSENNNRDRDVGG 913
            GTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQF Y ID PTSVS+E DSENNN+DRD+GG
Sbjct: 841  GTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFSYDIDRPTSVSNELDSENNNKDRDIGG 900

Query: 914  HPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSIKQTFSLFLSEKLS 973
            HPVGSLAACA+SEAAYSALDQPISLLEASPLLNLKRVLECGSKRNS KQTFSLFLSEKLS
Sbjct: 901  HPVGSLAACAMSEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSTKQTFSLFLSEKLS 960

Query: 974  KRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWVCHFHVCKEILKKR 1033
            KRSYGFEYGALGVKNHLERVMFKDIVS+VMI FSPQPSRKKHFSPWVCHFHVCKEILKKR
Sbjct: 961  KRSYGFEYGALGVKNHLERVMFKDIVSTVMIIFSPQPSRKKHFSPWVCHFHVCKEILKKR 1020

Query: 1034 RLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTK 1093
            RLKMNSVIHSLN+RCDSVRQEGRMNLPSLQII+QDCPLADS+ EDGDTVCLTVTIAENTK
Sbjct: 1021 RLKMNSVIHSLNIRCDSVRQEGRMNLPSLQIISQDCPLADSVREDGDTVCLTVTIAENTK 1080

Query: 1094 NSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPCCSHGELYLRVTMSGE 1153
            NSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKP C+HGELYLRVTMSGE
Sbjct: 1081 NSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPRCNHGELYLRVTMSGE 1140

Query: 1154 GNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDIGKT 1213
            GNSRFWATL+NNCLP+MDLIDW+RSHPDNTHSLCLAYGIDSGWKYFLNSL SATLDIGKT
Sbjct: 1141 GNSRFWATLVNNCLPVMDLIDWSRSHPDNTHSLCLAYGIDSGWKYFLNSLVSATLDIGKT 1200

Query: 1214 IRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACLVKAAKAGI 1273
            IRLEHLLL+ANSLSATGEFVGLNVKGL+HQREHALVKTPFMQACFSSPGAC VKAAKAG 
Sbjct: 1201 IRLEHLLLIANSLSATGEFVGLNVKGLSHQREHALVKTPFMQACFSSPGACFVKAAKAGS 1260

Query: 1274 KDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSICEKQNAKIE 1333
            KDNLSGSLDALAWGR+PSLGTGGQFDILYSG+GHELNKPVDVYNLLGGQS CEKQNAKI 
Sbjct: 1261 KDNLSGSLDALAWGRIPSLGTGGQFDILYSGRGHELNKPVDVYNLLGGQSTCEKQNAKIG 1320

Query: 1334 SLDKNNISEKYSAQLVLKNGGSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHK 1393
            SLDKNNISEKYSAQLVLKNGGSTIKGLK+LD+VSKSILR+FLTLNDIQKLSFALRTILHK
Sbjct: 1321 SLDKNNISEKYSAQLVLKNGGSTIKGLKKLDNVSKSILREFLTLNDIQKLSFALRTILHK 1380

Query: 1394 YSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTE 1453
            YSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTE
Sbjct: 1381 YSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTE 1440

Query: 1454 DFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1487
            DFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Sbjct: 1441 DFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE 1473

[Close]

BLAST of PI0019459 vs. TAIR 10
Match: AT1G63020.1 (nuclear RNA polymerase D1A )

HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 775/1476 (52.51%), Postives = 1020/1476 (69.11%), Query Frame = 0


Query: 17   MEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVSDPKLGLPNPSYQCTTC 76
            MED+ + EL +P G LT + FS+SN  D + ++V+ V+A ++V+D +LGLPNP   C TC
Sbjct: 1    MEDDCE-ELQVPVGTLTSIGFSISNNNDRDKMSVLEVEAPNQVTDSRLGLPNPDSVCRTC 60

Query: 77   GASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTSDYN 136
            G+   K CEGHFGVI F Y+II+PYFL EVA +LNK+CPGCK IR++ +   ED      
Sbjct: 61   GSKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPGCKYIRKKQFQITED------ 120

Query: 137  RPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYW 196
            +P+ CRYC  +L   YP M+F+++T ++F++S I+VEV E    K +KR     LP DYW
Sbjct: 121  QPERCRYC--TLNTGYPLMKFRVTTKEVFRRSGIVVEVNEESLMKLKKRGVL-TLPPDYW 180

Query: 197  DFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSH 256
             F+P+D   +ES  +P R+I+THAQV+ LL  ID + +KK +P  +SL L SFPVTPN +
Sbjct: 181  SFLPQDSNIDESCLKPTRRIITHAQVYALLLGIDQRLIKKDIPMFNSLGLTSFPVTPNGY 240

Query: 257  RVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD 316
            RVTE+ H F NG RLIFDERTR YKK+V F G   EL SRV++C++ S+L  E +  SKD
Sbjct: 241  RVTEIVHQF-NGARLIFDERTRIYKKLVGFEGNTLELSSRVMECMQYSRLFSETVSSSKD 300

Query: 317  LVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQ 376
                 +K  DT     GLR++KDV+LGKRSDH FR VVVGDP+++L+EIGIP  +A+RLQ
Sbjct: 301  SANPYQKKSDT-PKLCGLRFMKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQ 360

Query: 377  ISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVV 436
            +SEHL+  N ++L TS    L++  E++VRR  RLV ++ V +L  GD I+R L DGD V
Sbjct: 361  VSEHLNQCNKERLVTSFVPTLLDNKEMHVRRGDRLVAIQ-VNDLQTGDKIFRSLMDGDTV 420

Query: 437  LVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEV 496
            L+NRPPSIHQHSLIA++V++LP ++V+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VE+
Sbjct: 421  LMNRPPSIHQHSLIAMTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVEL 480

Query: 497  RELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSFNLFQMQQLQMLTLHQLLPP 556
             ELV+LD+QLIN Q+GRNLLSL  DSLTAA+L+ +E     N  QMQQLQM    QL PP
Sbjct: 481  DELVALDKQLINRQNGRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPP 540

Query: 557  AIVK-SPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELIS-SEGSYWLRDSGRN 616
            AI+K SP      WTG QLF +L PP FDY+ P +NV +  GEL+S SEGS WLRD   N
Sbjct: 541  AIIKASPSSTEPQWTGMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGN 600

Query: 617  LFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGL 676
              + L++H +GK LD +  AQ +L +WL  RGLSVSL+DLYLS D  S KN+ ++I  GL
Sbjct: 601  FIERLLKHDKGKVLDIIYSAQEMLSQWLLMRGLSVSLADLYLSSDLQSRKNLTEEISYGL 660

Query: 677  QEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKV 736
            +EAE+ CN +QLMV+S ++ L  N ED +      + R  YE+QKSA L++ +V AFK  
Sbjct: 661  REAEQVCNKQQLMVESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDA 720

Query: 737  FRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCS 796
            +RD+Q L Y+Y  + NS L M KAGSKGN+ KLVQHSMC+GLQ+S V+LSF  P +L+C+
Sbjct: 721  YRDVQALAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCA 780

Query: 797  AWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV 856
            AWN    P    K      T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA++
Sbjct: 781  AWNDPNSPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADL 840

Query: 857  PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSESDSENNNRDRDVG 916
            PGTL+R+L F MRDIY AYDGTVRN++GNQLVQF Y  D P                D+ 
Sbjct: 841  PGTLSRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETDGPV--------------EDIT 900

Query: 917  GHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSIKQTFSLFLSEKL 976
            G  +GSL+ACA+SEAAYSALDQPISLLE SPLLNLK VLECGSK+   +QT SL+LSE L
Sbjct: 901  GEALGSLSACALSEAAYSALDQPISLLETSPLLNLKNVLECGSKKGQREQTMSLYLSEYL 960

Query: 977  SKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWVCHFHVCKEILKK 1036
            SK+ +GFEYG+L +KNHLE++ F +IVS+ MI FSP  + K   SPWVCHFH+ +++LK+
Sbjct: 961  SKKKHGFEYGSLEIKNHLEKLSFSEIVSTSMIIFSPSSNTKVPLSPWVCHFHISEKVLKR 1020

Query: 1037 RRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLTVTIAEN 1096
            ++L   SV+ SLN +  S  +E ++++  L I  T  C   D   +D D VC+TVT+ E 
Sbjct: 1021 KQLSAESVVSSLNEQYKSRNRELKLDIVDLDIQNTNHCSSDDQAMKD-DNVCITVTVVEA 1080

Query: 1097 TKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPCCSH--GELYLRVT 1156
            +K+S L+LD I+ +LI FLL + ++G   I +V+I W DRPK PK   +H  GELYL+VT
Sbjct: 1081 SKHSVLELDAIRLVLIPFLLDSPVKGDQGIKKVNILWTDRPKAPKRNGNHLAGELYLKVT 1140

Query: 1157 MSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATL 1216
            M G+ G    W  L+  CLPIMD+IDW RSHPDN    C  YGID+G   F+ +LESA  
Sbjct: 1141 MYGDRGKRNCWTALLETCLPIMDMIDWGRSHPDNIRQCCSVYGIDAGRSIFVANLESAVS 1200

Query: 1217 DIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACLVKA 1276
            D GK I  EHLLLVA+SLS TGEFV LN KG + QR+      PF QACFSSP  C +KA
Sbjct: 1201 DTGKEILREHLLLVADSLSVTGEFVALNAKGWSKQRQVESTPAPFTQACFSSPSQCFLKA 1260

Query: 1277 AKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSICEKQ 1336
            AK G++D+L GS+DALAWG++P  GTG QF+I+ S K H    PVDVY+LL       + 
Sbjct: 1261 AKEGVRDDLQGSIDALAWGKVPGFGTGDQFEIIISPKVHGFTTPVDVYDLLSSTKTMRRT 1320

Query: 1337 NAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLD--SVSKSILRKFLTLNDIQKLSFA 1396
            N+  +       S+K + Q       + +K +K LD   +  S+LR   T  +I+ LS +
Sbjct: 1321 NSAPK-------SDKATVQPFGLLHSAFLKDIKVLDGKGIPMSLLRTIFTWKNIELLSQS 1380

Query: 1397 LRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLI 1456
            L+ ILH Y +NE LNE D+  + M L  HP+  EKIG G + I+V + SK+ ++ CF ++
Sbjct: 1381 LKRILHSYEINELLNERDEGLVKMVLQLHPNSVEKIGPGVKGIRV-AKSKHGDSCCFEVV 1440

Query: 1457 RSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQ 1483
            R DGT EDFSYHKCVLGA +IIAP ++  Y+SK+++
Sbjct: 1441 RIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLK 1440

[Close]

BLAST of PI0019459 vs. TAIR 10
Match: AT1G63020.2 (nuclear RNA polymerase D1A )

HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 775/1476 (52.51%), Postives = 1020/1476 (69.11%), Query Frame = 0


Query: 17   MEDEQDGELPIPSGLLTGVNFSVSNQQDIENIAVITVDAASEVSDPKLGLPNPSYQCTTC 76
            MED+ + EL +P G LT + FS+SN  D + ++V+ V+A ++V+D +LGLPNP   C TC
Sbjct: 1    MEDDCE-ELQVPVGTLTSIGFSISNNNDRDKMSVLEVEAPNQVTDSRLGLPNPDSVCRTC 60

Query: 77   GASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTSDYN 136
            G+   K CEGHFGVI F Y+II+PYFL EVA +LNK+CPGCK IR++ +   ED      
Sbjct: 61   GSKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPGCKYIRKKQFQITED------ 120

Query: 137  RPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYW 196
            +P+ CRYC  +L   YP M+F+++T ++F++S I+VEV E    K +KR     LP DYW
Sbjct: 121  QPERCRYC--TLNTGYPLMKFRVTTKEVFRRSGIVVEVNEESLMKLKKRGVL-TLPPDYW 180

Query: 197  DFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSH 256
             F+P+D   +ES  +P R+I+THAQV+ LL  ID + +KK +P  +SL L SFPVTPN +
Sbjct: 181  SFLPQDSNIDESCLKPTRRIITHAQVYALLLGIDQRLIKKDIPMFNSLGLTSFPVTPNGY 240

Query: 257  RVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD 316
            RVTE+ H F NG RLIFDERTR YKK+V F G   EL SRV++C++ S+L  E +  SKD
Sbjct: 241  RVTEIVHQF-NGARLIFDERTRIYKKLVGFEGNTLELSSRVMECMQYSRLFSETVSSSKD 300

Query: 317  LVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQ 376
                 +K  DT     GLR++KDV+LGKRSDH FR VVVGDP+++L+EIGIP  +A+RLQ
Sbjct: 301  SANPYQKKSDT-PKLCGLRFMKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQ 360

Query: 377  ISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVV 436
            +SEHL+  N ++L TS    L++  E++VRR  RLV ++ V +L  GD I+R L DGD V
Sbjct: 361  VSEHLNQCNKERLVTSFVPTLLDNKEMHVRRGDRLVAIQ-VNDLQTGDKIFRSLMDGDTV 420

Query: 437  LVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEV 496
            L+NRPPSIHQHSLIA++V++LP ++V+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VE+
Sbjct: 421  LMNRPPSIHQHSLIAMTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVEL 480

Query: 497  RELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSFNLFQMQQLQMLTLHQLLPP 556
             ELV+LD+QLIN Q+GRNLLSL  DSLTAA+L+ +E     N  QMQQLQM    QL PP
Sbjct: 481  DELVALDKQLINRQNGRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPP 540

Query: 557  AIVK-SPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELIS-SEGSYWLRDSGRN 616
            AI+K SP      WTG QLF +L PP FDY+ P +NV +  GEL+S SEGS WLRD   N
Sbjct: 541  AIIKASPSSTEPQWTGMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGN 600

Query: 617  LFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGL 676
              + L++H +GK LD +  AQ +L +WL  RGLSVSL+DLYLS D  S KN+ ++I  GL
Sbjct: 601  FIERLLKHDKGKVLDIIYSAQEMLSQWLLMRGLSVSLADLYLSSDLQSRKNLTEEISYGL 660

Query: 677  QEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKV 736
            +EAE+ CN +QLMV+S ++ L  N ED +      + R  YE+QKSA L++ +V AFK  
Sbjct: 661  REAEQVCNKQQLMVESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDA 720

Query: 737  FRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCS 796
            +RD+Q L Y+Y  + NS L M KAGSKGN+ KLVQHSMC+GLQ+S V+LSF  P +L+C+
Sbjct: 721  YRDVQALAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCA 780

Query: 797  AWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV 856
            AWN    P    K      T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA++
Sbjct: 781  AWNDPNSPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADL 840

Query: 857  PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYGIDTPTSVSSESDSENNNRDRDVG 916
            PGTL+R+L F MRDIY AYDGTVRN++GNQLVQF Y  D P                D+ 
Sbjct: 841  PGTLSRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETDGPV--------------EDIT 900

Query: 917  GHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSIKQTFSLFLSEKL 976
            G  +GSL+ACA+SEAAYSALDQPISLLE SPLLNLK VLECGSK+   +QT SL+LSE L
Sbjct: 901  GEALGSLSACALSEAAYSALDQPISLLETSPLLNLKNVLECGSKKGQREQTMSLYLSEYL 960

Query: 977  SKRSYGFEYGALGVKNHLERVMFKDIVSSVMITFSPQPSRKKHFSPWVCHFHVCKEILKK 1036
            SK+ +GFEYG+L +KNHLE++ F +IVS+ MI FSP  + K   SPWVCHFH+ +++LK+
Sbjct: 961  SKKKHGFEYGSLEIKNHLEKLSFSEIVSTSMIIFSPSSNTKVPLSPWVCHFHISEKVLKR 1020

Query: 1037 RRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLTVTIAEN 1096
            ++L   SV+ SLN +  S  +E ++++  L I  T  C   D   +D D VC+TVT+ E 
Sbjct: 1021 KQLSAESVVSSLNEQYKSRNRELKLDIVDLDIQNTNHCSSDDQAMKD-DNVCITVTVVEA 1080

Query: 1097 TKNSFLQLDFIQDLLIHFLLGTVIRGFAEIDRVDIAWNDRPKVPKPCCSH--GELYLRVT 1156
            +K+S L+LD I+ +LI FLL + ++G   I +V+I W DRPK PK   +H  GELYL+VT
Sbjct: 1081 SKHSVLELDAIRLVLIPFLLDSPVKGDQGIKKVNILWTDRPKAPKRNGNHLAGELYLKVT 1140

Query: 1157 MSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATL 1216
            M G+ G    W  L+  CLPIMD+IDW RSHPDN    C  YGID+G   F+ +LESA  
Sbjct: 1141 MYGDRGKRNCWTALLETCLPIMDMIDWGRSHPDNIRQCCSVYGIDAGRSIFVANLESAVS 1200

Query: 1217 DIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACLVKA 1276
            D GK I  EHLLLVA+SLS TGEFV LN KG + QR+      PF QACFSSP  C +KA
Sbjct: 1201 DTGKEILREHLLLVADSLSVTGEFVALNAKGWSKQRQVESTPAPFTQACFSSPSQCFLKA 1260

Query: 1277 AKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSICEKQ 1336
            AK G++D+L GS+DALAWG++P  GTG QF+I+ S K H    PVDVY+LL       + 
Sbjct: 1261 AKEGVRDDLQGSIDALAWGKVPGFGTGDQFEIIISPKVHGFTTPVDVYDLLSSTKTMRRT 1320

Query: 1337 NAKIESLDKNNISEKYSAQLVLKNGGSTIKGLKRLD--SVSKSILRKFLTLNDIQKLSFA 1396
            N+  +       S+K + Q       + +K +K LD   +  S+LR   T  +I+ LS +
Sbjct: 1321 NSAPK-------SDKATVQPFGLLHSAFLKDIKVLDGKGIPMSLLRTIFTWKNIELLSQS 1380

Query: 1397 LRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLI 1456
            L+ ILH Y +NE LNE D+  + M L  HP+  EKIG G + I+V + SK+ ++ CF ++
Sbjct: 1381 LKRILHSYEINELLNERDEGLVKMVLQLHPNSVEKIGPGVKGIRV-AKSKHGDSCCFEVV 1440

Query: 1457 RSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQ 1483
            R DGT EDFSYHKCVLGA +IIAP ++  Y+SK+++
Sbjct: 1441 RIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLK 1440

[Close]

BLAST of PI0019459 vs. TAIR 10
Match: AT2G40030.1 (nuclear RNA polymerase D1B )

HSP 1 Score: 399.4 bits (1025), Expect = 1.2e-110
Identity = 372/1374 (27.07%), Postives = 609/1374 (44.32%), Query Frame = 0


Query: 17   MEDEQDGELPIPSGLLTGVNFSVSNQQD--IENIAVITVDAASEVSDPKLGLPNPSYQCT 76
            ME+E   E  I  G + G+ F++++  +  I++I+   ++  S++++  LGLP    +C 
Sbjct: 1    MEEESTSE--ILDGEIVGITFALASHHEICIQSISESAINHPSQLTNAFLGLPLEFGKCE 60

Query: 77   TCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSIRQELWGKVEDPTSD 136
            +CGA+    CEGHFG I+ P  I HP  ++E+ Q+L+ +C  C  I+             
Sbjct: 61   SCGATEPDKCEGHFGYIQLPVPIYHPAHVNELKQMLSLLCLKCLKIK------------- 120

Query: 137  YNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKY--QKRVAKGGLP 196
              + KG     G L D       +L      + S I ++ + +    Y   K  ++  L 
Sbjct: 121  --KAKGTS---GGLAD-------RLLGVCCEEASQISIKDRASDGASYLELKLPSRSRLQ 180

Query: 197  SDYWDFIPK-DEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKF-----VPAIDSLFL 256
               W+F+ +   +    Y RP    L   +V  +L+ I  +  KK      +P  +   L
Sbjct: 181  PGCWNFLERYGYRYGSDYTRP----LLAREVKEILRRIPEESRKKLTAKGHIPQ-EGYIL 240

Query: 257  NSFPVTPNSHRVTEMAHSFS----NGQRLIFDERTRAYKKVVDFRGT------------- 316
               PV PN   V E +  FS    +  R+   E     KKV+  + +             
Sbjct: 241  EYLPVPPNCLSVPEASDGFSTMSVDPSRI---ELKDVLKKVIAIKSSRSGETNFESHKAE 300

Query: 317  ANELGSRVLDCLKISKLSPEKLQSKDLVYQQKKIKDTATSSSGLRWIKDVVLGKRSDHCF 376
            A+E+  RV+D     + + +  ++ D+ Y   KI D+++S +    ++ + + K S    
Sbjct: 301  ASEM-FRVVDTYLQVRGTAKAARNIDMRYGVSKISDSSSSKAWTEKMRTLFIRKGSGFSS 360

Query: 377  RMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWN----MKKLSTSCYLHLVEKGEIYVR 436
            R V+ GD    ++E+GIP  +A+R+   E +S  N     K +     L   +    Y  
Sbjct: 361  RSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNRGYLQKLVDDKLCLSYTQGSTTYSL 420

Query: 437  REGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLN 496
            R+G     +   EL  G  ++R + DGDVV +NRPP+ H+HSL AL V +   + V  +N
Sbjct: 421  RDGS----KGHTELKPGQVVHRRVMDGDVVFINRPPTTHKHSLQALRVYVHEDNTV-KIN 480

Query: 497  PLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAA 556
            PL CSP   DFDGDC+H + PQSL A+ EV EL S+++QL++  +G+ +L +  DSL + 
Sbjct: 481  PLMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSSHTGQLILQMGSDSLLSL 540

Query: 557  HLILEDGVSFNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSS 616
             ++LE  V  +    QQL M     L PPA+ KS      AWT  Q+  +  P     S 
Sbjct: 541  RVMLE-RVFLDKATAQQLAMYGSLSLPPPALRKSS-KSGPAWTVFQILQLAFPERL--SC 600

Query: 617  PSHNVFIEKGELISSEGSYWLRDSGRN--LFQALIEHCQGKTLDYLRDAQGVLCEWLSTR 676
                  ++  +L+  +       S  N  +    +E    +TL +    Q +L E L   
Sbjct: 601  KGDRFLVDGSDLLKFDFGVDAMGSIINEIVTSIFLEKGPKETLGFFDSLQPLLMESLFAE 660

Query: 677  GLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHL 736
            G S+SL DL     S S  +M  D+   L   E +  + +L +    E+   N       
Sbjct: 661  GFSLSLEDL-----SMSRADM--DVIHNLIIREISPMVSRLRLSYRDELQLENS------ 720

Query: 737  LSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLM 796
                       K K  A N      F      I+NL+     K NS +T           
Sbjct: 721  ---------IHKVKEVAAN------FMLKSYSIRNLI---DIKSNSAIT----------- 780

Query: 797  KLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVEN 856
            KLVQ +  LGLQ S     ++       + +  +K  R I   G          + +V+ 
Sbjct: 781  KLVQQTGFLGLQLSDKKKFYTKTLVEDMAIFCKRKYGR-ISSSG---------DFGIVKG 840

Query: 857  SFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGN 916
             F  GL+P+E  AHS+  R+     S     PGTL + L  ++RDI    DGTVRN   N
Sbjct: 841  CFFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSN 900

Query: 917  QLVQFCYGIDTPTSVSSESDSENNNRDRDVGGHPVGSLAACAISEAAYSALDQPISLLEA 976
             ++QF YG+          DSE  ++     G PVG LAA A+S  AY A      +L++
Sbjct: 901  SVIQFKYGV----------DSERGHQGLFEAGEPVGVLAATAMSNPAYKA------VLDS 960

Query: 977  SPLLN-----LKRVLEC--GSKRNSIKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVM 1036
            SP  N     +K VL C    +  +  +   L+L+E    + +  E  A  V+N L +V 
Sbjct: 961  SPNSNSSWELMKEVLLCKVNFQNTTNDRRVILYLNECHCGKRFCQENAACTVRNKLNKVS 1020

Query: 1037 FKDIVSSVMITFSPQPSRKKHFSPWVC---HFHVCKEILKKRRLKMNSVIHSLNMRCDSV 1096
             KD     ++ +  QP+  + F    C   H H+ K +L+   + M  +        +S+
Sbjct: 1021 LKDTAVEFLVEYRKQPTISEIFGIDSCLHGHIHLNKTLLQDWNISMQDIHQKCEDVINSL 1080

Query: 1097 RQEGRMNLP-----SLQIITQDCPLADSLTEDG-DTVCLTVTIAENTKNSFLQLDFIQDL 1156
             Q+ +         +   +++ C   D     G D  CLT +      +    LD + + 
Sbjct: 1081 GQKKKKKATDDFKRTSLSVSECCSFRDPCGSKGSDMPCLTFSYNATDPDLERTLDVLCNT 1140

Query: 1157 LIHFLLGTVIRGFAEIDRVDIAWNDRPKVP----KPCCSHGELYLRVTMSGEG---NSRF 1216
            +   LL  VI+G + I   +I WN          +     GE  L VT+       +   
Sbjct: 1141 VYPVLLEIVIKGDSRICSANIIWNSSDMTTWIRNRHASRRGEWVLDVTVEKSAVKQSGDA 1200

Query: 1217 WATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDIGKTIRLEH 1276
            W  ++++CL ++ LID  RS P +   +    G+   ++  +  L ++   + K +  EH
Sbjct: 1201 WRVVIDSCLSVLHLIDTKRSIPYSVKQVQELLGLSCAFEQAVQRLSASVRMVSKGVLKEH 1259

Query: 1277 LLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACLVKAAKAGIKDNLS 1331
            ++L+AN+++ +G  +G N  G         +K PF +A   +P  C  KAA+    D+LS
Sbjct: 1261 IILLANNMTCSGTMLGFNSGGYKALTRSLNIKAPFTEATLIAPRKCFEKAAEKCHTDSLS 1259

HSP 2 Score: 64.7 bits (156), Expect = 7.2e-10
Identity = 34/107 (31.78%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 1377 LNDIQKLSFALRTILH--KYSLNERLNEVDKS-TLMMALYFHPHRDEKIGVGAQDIKVGS 1436
            L+D++ +   LR I+H   Y   + +++ DK+  L   L FHP ++ K+G G   I V  
Sbjct: 1740 LSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDK 1799

Query: 1437 HSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKW 1481
            H+ + ++RCF ++ +DG  +DFSY K +   L    P R + +  K+
Sbjct: 1800 HTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKY 1846

[Close]

BLAST of PI0019459 vs. TAIR 10
Match: AT4G35800.1 (RNA polymerase II large subunit )

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-50
Identity = 231/950 (24.32%), Postives = 404/950 (42.53%), Query Frame = 0


Query: 35  VNFSVSNQQDIENIAVITVDAASE----------VSDPKLGLPNPSYQCTTCGASSLKFC 94
           V F + +  +I  ++VI V+ +            +SD +LG  +   +C TC A+  + C
Sbjct: 18  VQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDTRLGTIDRKVKCETCMANMAE-C 77

Query: 95  EGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSI---------RQELWGKVEDPTSDY 154
            GHFG ++    + H  F+  V  ++  VC  C  I         +Q +  K+++P +  
Sbjct: 78  PGHFGYLELAKPMYHVGFMKTVLSIMRCVCFNCSKILADEEEHKFKQAM--KIKNPKNRL 137

Query: 155 NR----PKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEVKE--------NMSKKYQ 214
            +     K    C G   D    ++   ST +  KKS      ++         M  +Y+
Sbjct: 138 KKILDACKNKTKCDGG--DDIDDVQ-SHSTDEPVKKSRGGCGAQQPKLTIEGMKMIAEYK 197

Query: 215 KRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDS 274
            +  K   P    +  P + +Q     R    +   +     L   +PKF +      D 
Sbjct: 198 IQRKKNDEPDQLPE--PAERKQTLGADRVLSVLKRISDADCQLLGFNPKFARP-----DW 257

Query: 275 LFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKI 334
           + L   P+ P   R + M  + S  +    D+ T     ++                  I
Sbjct: 258 MILEVLPIPPPPVRPSVMMDATSRSE----DDLTHQLAMIIRHNENLKRQEKNGAPAHII 317

Query: 335 SKLSPEKLQSKDLVYQQKKI--KDTATSSSGLRWIKDV--------------VLGKRSDH 394
           S+ + + LQ     Y   ++  +  AT  SG R IK +              ++GKR D 
Sbjct: 318 SEFT-QLLQFHIATYFDNELPGQPRATQKSG-RPIKSICSRLKAKEGRIRGNLMGKRVDF 377

Query: 395 CFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKG------- 454
             R V+  DP I + E+G+P  +A  L   E ++ +N+++L       LV+ G       
Sbjct: 378 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLK-----ELVDYGPHPPPGK 437

Query: 455 ---EIYVRREGRLVRVRNVLE-----LNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALS 514
              +  +R +G+ + +R + +     L +G  + R L DGD VL NR PS+H+ S++   
Sbjct: 438 TGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHR 497

Query: 515 VKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGR 574
           ++++P S    LN    SP+  DFDGD ++ +VPQS E R EV EL+ + + +++ Q+ R
Sbjct: 498 IRIMPYS-TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 557

Query: 575 NLLSLSHDSLTAAHLIL--EDGVSFNLFQMQQLQMLTLHQLLP-PAIVKSPLLRNCAWTG 634
            ++ +  D+L     I   +  +  ++F    +        +P PAI+K   L    WTG
Sbjct: 558 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL----WTG 617

Query: 635 KQLFSILLPPDFD---YSS------------PSHNVFIEKGELISSE-GSYWLRDSGRNL 694
           KQ+F++++P   +   YS+                V IE+GEL++       L  S  +L
Sbjct: 618 KQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSNGSL 677

Query: 695 FQALIEHC-QGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHKNMMDDIFCGL 754
              + E         +L   Q ++  WL   G ++ +       D+ +  + M+ I    
Sbjct: 678 VHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIG------DTIADSSTMEKI---- 737

Query: 755 QEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKV 814
              E   N K  + D  ++   G + D +   ++   R  +E + +  LN+A  DA    
Sbjct: 738 --NETISNAKTAVKDLIRQ-FQGKELDPEPGRTM---RDTFENRVNQVLNKARDDAGSSA 797

Query: 815 FRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCS 874
            + +         + N+L  M  AGSKG+ + + Q + C+G Q        ++  K    
Sbjct: 798 QKSL--------AETNNLKAMVTAGSKGSFINISQMTACVGQQ--------NVEGKRIPF 857

Query: 875 AWNSQKIPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV 901
            ++ + +P + + D  P+          VENS+L GL P E F H++  R+       + 
Sbjct: 858 GFDGRTLPHFTKDDYGPESR------GFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKT 899

[Close]

BLAST of PI0019459 vs. TAIR 10
Match: AT5G60040.1 (nuclear RNA polymerase C1 )

HSP 1 Score: 169.1 bits (427), Expect = 2.7e-41
Identity = 308/1377 (22.37%), Postives = 545/1377 (39.58%), Query Frame = 0


Query: 61   DPKLGLPNPSYQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGC--- 120
            DP++G PN    CTTC   + + C GH+G +K    + +  + + +  +L  +C  C   
Sbjct: 63   DPRMGPPNKKSICTTC-EGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNM 122

Query: 121  ---KSIRQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMI-MVE 180
               + + ++   K+ +P  +  +                  R        +   M+  + 
Sbjct: 123  LLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIA 182

Query: 181  VKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKF 240
             +  +   + +    GG   +    I    +Q  +   P   +L    V  L K +  K 
Sbjct: 183  AQFGIGISHDRSKIHGGEIDECKSAI-SHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKD 242

Query: 241  LKKFVPAI--DSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTAN 300
             +    A   ++L +    V P S R + M     + +    ++ T   K+++    + +
Sbjct: 243  CELLYIAYRPENLIITCMLVPPLSIRPSVMIGGIQSNE----NDLTARLKQIILGNASLH 302

Query: 301  ELGSRVLDCLKISKLSPEKLQSKDLV------YQQKKIKDTATS------SSGLRWIKDV 360
            ++ S+          SP+ +Q  D V      Y   +++           S  L+ +K  
Sbjct: 303  KILSQPTS-------SPKNMQVWDTVQIEVARYINSEVRGCQNQPEEHPLSGILQRLKGK 362

Query: 361  -------VLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSC 420
                   + GKR +   R V+  DPN++++E+GIP  +A+ L   E +S  N++KL   C
Sbjct: 363  GGRFRANLSGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKL-RQC 422

Query: 421  YLHLVEK--GEIYVR----REGRLV---RVRNVLELNMGDTIYRPLADGDVVLVNRPPSI 480
              +   K  G   VR        LV   R R   EL +G  + R L +GDVVL NR PS+
Sbjct: 423  VRNGPNKYPGARNVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSL 482

Query: 481  HQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDR 540
            H+ S++    +++P    L  N   C+P+  DFDGD ++ +VPQ+ EAR E   L+ +  
Sbjct: 483  HRMSIMCHRARIMP-WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQN 542

Query: 541  QLINGQSGRNLLSLSHDSLTAAHLILE-----DGVSFNLFQMQQLQMLTLHQLLPPAIVK 600
             L   ++G  L++ + D LT++ LI       D  +F+L        +    L  P I+K
Sbjct: 543  NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILK 602

Query: 601  SPLLRNCAWTGKQLFSILLPP-------------DFDYSSPSHN-----------VFIEK 660
               L    WTGKQ+FS+LL P             + ++    H            V+   
Sbjct: 603  PIEL----WTGKQIFSVLLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRN 662

Query: 661  GELISSE-GSYWLRDSGRN-LFQALIEHCQGKTLDYLRDAQGVLCEWLSTRGLSVSLSDL 720
             ELIS + G   L +  ++ L+  L+        DY   A  V    L+       LS  
Sbjct: 663  SELISGQLGKATLGNGNKDGLYSILLR-------DYNSHAAAVCMNRLA------KLSAR 722

Query: 721  YLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDS-HKEILTGNDEDNQHLLSIAVERL 780
            ++ +  +S    +DD+  G + ++E  +  Q   D  H++I    +E N+  L       
Sbjct: 723  WIGIHGFSIG--IDDVQPGEELSKERKDSIQFGYDQCHRKI----EEFNRGNL------- 782

Query: 781  IYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGK--------DNSLLTMFKAGSKGNLM 840
                Q  A L+ A   + +     I N + + +GK         NS L M + GSKG+ +
Sbjct: 783  ----QLKAGLDGAK--SLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQCGSKGSPI 842

Query: 841  KLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKIPRYIQKDGLPDRTQSFIPYAVVEN 900
             + Q   C+G Q        ++    +   +  + +P +      P  ++S      V N
Sbjct: 843  NISQMVACVGQQ--------TVNGHRAPDGFIDRSLPHF------PRMSKSPAAKGFVAN 902

Query: 901  SFLSGLNPFECFAHSVTNRDSSFSDNAEVPGT--LTRKLTFLMRDIYTAYDGTVRNAYGN 960
            SF SGL   E F H++  R+       +   T  ++R+L   + D+   YD TVRNA G 
Sbjct: 903  SFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASG- 962

Query: 961  QLVQFCYGID----------------------------TPTSVSSESDSENNNR--DRDV 1020
             ++QF YG D                             P S  +   SE  ++  + ++
Sbjct: 963  CILQFTYGDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEEL 1022

Query: 1021 GGHPVGSLAACAISEAAYSALDQPISLL---EASPLLNLKRVLECGSKRNSIKQTFSLFL 1080
              H    +     ++A   +L + +SLL    ASP   L +      K+  +     +F 
Sbjct: 1023 VRHDKSRVC----TDAFVKSLREFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVFR 1082

Query: 1081 SEKLSKRSYGFEYGALGVKN-------------HLERVMFKDIVSSVMITFSPQPSRKKH 1140
              +  K   G   G +G ++             H   V   +I   V        + K  
Sbjct: 1083 YRE-KKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNI 1142

Query: 1141 FSPWV-CHFHVCKEILKKRRLKMNSVIHSLNMRCDSVRQEGRMNLPSLQIITQDCPLADS 1200
             +P +        E+   R +K      +L    +S+         S++II     L + 
Sbjct: 1143 STPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRII-----LDNK 1202

Query: 1201 LTEDGDTVCLTVTIAENTKNSFLQLDFIQ--DLLIHFL-LGTVIRGFAEIDRVDIAWNDR 1260
            + E+    CL++T   + KNS L+   I+  D  I  L  G  I    +  R     ++ 
Sbjct: 1203 IIEE---ACLSIT-PWSVKNSILKTPRIKLNDNDIRVLDTGLDITPVVDKSRAHFNLHNL 1262

Query: 1261 PKV-PKPCCSHGELYLRVTMSG--------EGNSRFWATLM--NNCLPIMDL--IDWTRS 1296
              V P    +  +   RV ++         +G ++ W   +   N L +M    I+   +
Sbjct: 1263 KNVLPNIIVNGIKTVERVVVAEDMDKSKQIDGKTK-WKLFVEGTNLLAVMGTPGINGRTT 1322

The following BLAST results are available for this feature:

BLAST of PI0019459 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ02	0.0e+00	52.51	DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPD...	[more]
Q5D869	1.7e-109	27.07	DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1...	[more]
P36594	2.1e-59	25.11	DNA-directed RNA polymerase II subunit rpb1 OS=Schizosaccharomyces pombe (strain...	[more]
P11414	3.9e-53	24.77	DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=PO...	[more]
P24928	3.9e-53	24.77	DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE...	[more]

BLAST of PI0019459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2L4	0.0e+00	97.51	DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_3G039340 PE=4 SV=1	[more]
A0A5D3D780	0.0e+00	96.56	DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S4DY39	0.0e+00	96.72	DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103490982 PE=4 SV=1	[more]
A0A6J1FKU9	0.0e+00	88.70	DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111444908 PE=4 S...	[more]
A0A6J1KSL8	0.0e+00	88.57	DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111498320 PE=4 SV=...	[more]

BLAST of PI0019459 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650447.1	0.0e+00	97.51	DNA-directed RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus] >XP_011650...	[more]
TYK19428.1	0.0e+00	96.56	DNA-directed RNA polymerase IV subunit 1 [Cucumis melo var. makuwa]	[more]
XP_016900630.1	0.0e+00	96.72	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV subunit 1 [Cucumi...	[more]
XP_038905038.1	0.0e+00	94.89	DNA-directed RNA polymerase IV subunit 1 isoform X1 [Benincasa hispida] >XP_0389...	[more]
XP_038905042.1	0.0e+00	95.11	DNA-directed RNA polymerase IV subunit 1 isoform X2 [Benincasa hispida]	[more]

BLAST of PI0019459 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63020.1	0.0e+00	52.51	nuclear RNA polymerase D1A	[more]
AT1G63020.2	0.0e+00	52.51	nuclear RNA polymerase D1A	[more]
AT2G40030.1	1.2e-110	27.07	nuclear RNA polymerase D1B	[more]
AT4G35800.1	1.9e-50	24.32	RNA polymerase II large subunit	[more]
AT5G60040.1	2.7e-41	22.37	nuclear RNA polymerase C1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006592	RNA polymerase, N-terminal	SMART	SM00663	rpolaneu7	coord: 242..529 e-value: 1.3E-30 score: 117.7
IPR007066	RNA polymerase Rpb1, domain 3	PFAM	PF04983	RNA_pol_Rpb1_3	coord: 505..652 e-value: 2.0E-14 score: 53.8
None	No IPR available	GENE3D	3.10.450.40		coord: 1372..1463 e-value: 4.3E-24 score: 86.8
None	No IPR available	GENE3D	3.30.1490.180	RNA polymerase ii	coord: 375..427 e-value: 1.2E-41 score: 144.6
None	No IPR available	GENE3D	6.20.50.80		coord: 866..909 e-value: 8.2E-6 score: 27.2
None	No IPR available	GENE3D	2.40.40.20		coord: 337..508 e-value: 1.2E-41 score: 144.6
None	No IPR available	PFAM	PF11523	DUF3223	coord: 1389..1461 e-value: 2.2E-25 score: 89.2
None	No IPR available	PANTHER	PTHR19376:SF36	DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1	coord: 17..1371
None	No IPR available	PANTHER	PTHR19376	DNA-DIRECTED RNA POLYMERASE	coord: 17..1371
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 29..1302
IPR000722	RNA polymerase, alpha subunit	PFAM	PF00623	RNA_pol_Rpb1_2	coord: 342..500 e-value: 1.5E-33 score: 116.4
IPR044893	RNA polymerase Rpb1, clamp domain superfamily	GENE3D	4.10.860.120	RNA polymerase II, clamp domain	coord: 29..126 e-value: 3.1E-12 score: 48.3
IPR042102	RNA polymerase Rpb1, domain 3 superfamily	GENE3D	1.10.274.100	RNA polymerase Rpb1, domain 3	coord: 509..657 e-value: 1.2E-19 score: 72.6
IPR007083	RNA polymerase Rpb1, domain 4	PFAM	PF05000	RNA_pol_Rpb1_4	coord: 718..779 e-value: 2.0E-10 score: 40.6
IPR038120	RNA polymerase Rpb1, funnel domain superfamily	GENE3D	1.10.132.30		coord: 677..829 e-value: 3.0E-11 score: 45.5
IPR040403	DNA-directed RNA polymerase IV/V subunit 1, N-terminal	CDD	cd10506	RNAP_IV_RPD1_N	coord: 40..876 e-value: 0.0 score: 1266.94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019459.1	PI0019459.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0046872	metal ion binding