PI0019374 (gene) Melon (PI 482460) v1

Overview


Name	PI0019374
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Aconitate hydratase
Location	chr02: 20123560 .. 20130301 (+)
RNA-Seq Expression	PI0019374
Synteny	PI0019374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTAAAGAGAGAGTCCATATTTTTCAGTGTTATGCTTCTTCTTCTTCTTTCATTTATGGCAACAGGGAGACTCATCCATTCTACTTCACTTCATGGAGATTGTAAGTTCCATATTCCTTTTTATCTCCTCTCTTTATTTTTAATTATCTCTTCATCGCAAAAATTTATTACATTAGGAGTGATTCGGGAGTGAGTTTTGTCATTTTCTAATTCCCTTTGAAAACTTAATTTTGATGGGTGTGAATATCATTCATATTTAATTTGAAAGATTAATTAAATGTTAATCTAAATAAATTAATGATCAAGGATGAAAAAGTTGGTGACGGAGATGAATTAGGCGTCGATGATGAACTATAATTTTCATATCTTTAGTTGAAAAAGAGTTGTTTCAACCACCTTTGTATTATCTTCTTGATGTACTCTCTCATTTATTGGGGTATGGTTTGCTTAGTCTGACACTTGAAAATATCACTCTCTATTTCTTACAACTCAAAAAGGTATTTTTGGATGTAAAATGATAGTATGACATTTAAAATATAAAAACAATCATTAAATTGATTTGAAATGTTACTAATGTTACAGTCATTTTTAAACCACATAAAATTAACCATGGAAAAATAACTCTAATACATTTTTTTTAATAAGAAAGTAAAGAAATCTAACATGAGTAACATTTTATACAATATAACTGTAACGACCCGACTTTCTAGAACAAACGAGGTCATTACTACGACTCCAGAGAAAAAGACCAATTTTAATAAATATGAACTTTCCATAAATTAGCAAAATAATTTTGAAAAAACAAATACGGAAATCAACAAGTGTGGGCCCACGTAAAAAAAAAACAACGAAATACAAAACGATCATTTAACTAGTACGAAGTCAAAAGTTTCAAAGTTAAAGACACAACAGTCAGACCCAAAATAATACAAAAATGACATAACCCAAGTGCGGAAGCGGCAACCCCTACTAGGGATGTCATTACTACAGGTCCTGCTAGGGATCAAAACTGTTAACTTCCTATTGGGGGTACCCTGTAGCAATATACAGTCTAGAAATCCTGAGGGATGTCCATCATACAGTCTGGCGATCCCAAGGGACACGCCTAATCAGTCTTGTGATCCCGAAGGATGCACCTAATCAGTCTAGTGAACCCGTAGGAACACAAATAAAGAAGAGGTCCCGTAGGACTCCGTGCCTGCAAGTACACTACCCATAGCTAAAGCTAACAGTTTACCCTCAGTCTATATGAAACACACCAGTCTACATAGTCCAGAACATCAAATCCCAATAATGAAGCTCCATACAGACAAACTTTGGTTATTCTAAGGCTCAAATTAAACTAATAACAGAACAACAATTCATCAGAGAAATATACCAACATTCCATACAACCAAAGTAGTCAACAACGTTCCAAAATCCTCAATGCAACCAATCCTTAAATCAATTAAGCAAGGCATCAATAGTTCGCTAGTCCGGTAGAAAAGGCCCTTACCTTAACCGAGCTAATCGAAAGGTACCAACGAGCCAAGAAGAATCCTAAACAACAAAGTAACCAACATCCAATCAATTTCTCAACTCAACCCAACAAAAATCACATAAACTTCAATAACACTTACCCAAAAATCAAAATGGAATTTGGGCTCCAAAATGCCCAAATCCAAATGAACCAAAATGAGCGCGCGGCGAGAAAAACAACGGTGCCTTCAACAAAACCACACAAACTTCAATAGTCATAAATTATTTCTTAACTTTAACAAAACCAAAAACTACAAGGTGGGTTCTAAATCGAGAAAAATCCGGTGCGAAACTCACCAAAAATGCCAAGAATGTGGCTGGAAGGGTGAGGACGGCACAGATCCGAGTCAGGCGGCGTGGACGACGGCAGGACGAATGGCACAAAAAGGCTCCTTGCAAGGATTGGCGGCGCGACTGGACGATGGCGGCGTGCTGGTGGAGCGGACGGAGGCCGCGGACTGGGTGGCGACACTGGCGGTGGCGGCGTGTTGGTCTGGAAAAGAAGAAAATAAAGAAGAAAGATGAGGGGGGCTGGTTCTGGAGAAAGAGGAAAAAGAAAGAAGAAAGAAAAAGAAAGGGGGGGGGAGGGGGCGCGAAGAAGAAAAGGAAAAAGAAGGGGGGGCTGCCGCCTCTCTCTCCTTTTTTTTATTTCAAAATAATAATAATAATAATAATAAAACTATTATTATTATATTTATATTATTAACTCCAAAAAAAACTCAAATTACCTCAAAAAATTCTCAAAATTTCGCGGCGTTACATTCTTTCCTCCTTAAGGAACTTTCGTCCTCAAAAGTTTTAATCCTCGAATAACGCTAGGTAACGAGCTCTCATGACGTCTTCCCGTTCCTAGGTAGCCTCTTCAACTCGATGATTTCGCCATATAACTTCCACCAAGGCAATTCCCCTTTTACGAAGTGTCTTCACTTCCTAGCCAAGATCTCAACCGGATGCTCCTCATAGCTCAAATTCTCATCAATCACTAATGGCTCATAATCCACTACATGAGATGGATCGGTCACGTACTTCCTCAACATCGAAACATGGAAGACATCATGAACGGCAGAGAGTGAGGGTGGCAACACCAAACGGTACGCTACGGGGCCAATCCACTCTAAAATCTCAAATGGTCCAACGAAGCGAGGACTCAGCTTTCCCTTCTTCTCAAATCGCAGGACACCCTTCATGGGTGCCACTTTCAAAAACACTTTATCTCCCACCTCAAACTCAAGATTCTTCCATCTCACATCGGCATAACTTTTCTGTCTACTCTGCGCGGCTTGCATACGTGCTCTAATCTTCTGTATAGCCTCATTAGTAGACTGAACCAACTTAGGGCCCATCAACTTCTGTTCACCAACCTCGCCCAAACAAATAGGCGATCTGCAGCACTTACCATACAAGGCCTCAAACGGTGCCATGCCAATGGTAGCCTGAAAACTGTTATTATAGGCAAACTCCATCAAATGCAAGTGTGTTCAGTATTATTACTTCTTACCGCATACTTCATTTGTAAGGAAGACAAAAGAATTCTATCAATTCTTACTCCACTTCTGTCTCATCCCATATTTCTTTACTACTTTTATTTTCCTTTCTTTTCTCGCAAACAACAAACCCCCTCCCCTACTACTAACTATTTTCGTGTCTTGAAGCTATTTCATTTTACTTTAAACCTATTATCAATTAGAAAGCGCAGTTTGCTCCCTTGGGTACGACAACTCTCTTCTCCAAATACTTCCACTACATCTATGAATCGACCAACTCATAATGCCCATACCTCGAACGAAAAGCCGTCTTTGGTATGTCACCATCCTTAATCCTCAACTGATGGTATCCCGATCGAAGGTCGATCTTAGAGAACACGGTGGCTCTCTGTAACTGGTCAAACAAGTCATCAATCCTACGCAGGGGGTACTTGTTCTTAACTGTCACCTTATTTAACTCCTTGTAATCAATGCATAAATGCATCGATCCATCTTTCTTCTTAACAAACAGCATCGGTGCCCCCCAAGGAGACACACTAGGTCGAACAAAGCCCTTGTCAAGCAATTCCTGCAACTGAACCTTTAGCTCTTTCAACTCTGCTGGAGCCATTCTGTAAGGGGCTCTAGATATAGGAACGGTACCTTGCTCCAACTCAATAGCAAAGTCAATTTCCCTGATGGGAGGTAACCCTAGAAGTTTCTCGGGAAAGACGTCAGGATAGTCCTCACCACGGGCTCAGTCGTCAAAGAAGCCTTTACTTCCCTAGTATCTACCACACTAGCCAAAATACTCCAAGAACCCTGATTGAGTAACTTACTGGCCTTCATCGCTGAGATCACCTTGGGCAACACCACAGTCCTCACTCCCTTGAACTTAAAGCGGGGCGCTGAAGGAGGACTAAACGTTACCTCCTTGCGAGAACAATCTATACTGACGTGGTTAACAGCTAGCCAGTCCATGCCTAGAATTATATCAAAATCACGCATATCCAGAACCAAAAGAGTGACATCTAGTACATGACCAGCTACCTCAATATGACATGCTTTTATCTGTTCTTTCGACAACATAATCTCTCTAGAGGGAGTGGACACAGATAAGACATAAGCTAAGGGCTCCACTTCTAAACATGCATGCTTAAGAAACACTGAGGATATAAAAGAATGCGATGAACCAGAGTCAAACAGAACCAATGCAAAATGCCCCAACACTGGAAGCGTACCTGTCACAACTGTACCAGCTATATCGGCCTCTACTATGCTAGTGGCGAAGACTTTACCCTGCTGAGTCGAACCTGCTCCCTGGTTCTGCGAAACCCCAACCACTTCTCTAGGGCATCTATCAGCTGTATGCCCCTCTTGTTCACACTTGAAGCAAGTCCTGGTCCCAAACAGACAATGACCTAGGTGGTGTTTCCCACACGTGGTACACAGGGGTTTGTCTCTGATAGCTCCTTCTGTCTCAGTAGGACTCTGCTGAAAGCGACGGAAGTCCCCACCAGACCTCGAGTTCCTCTGAGGAACCTCAACTGGCGATTGCTCCGCCTTTCTTTTCCACCCAGATGATGCCTCTTTACTAGAGGACTTCACTGGGACATCATCTTCCTGCACACTCATGTCCACTGCCAGGCGTAGCGCTTCAGCCTGAGTGGCTGGCTTGAAGGCCCGCACAAAGCCTCGGATATCACCCCTCAAACCTCTAACAAACCTCTCTGCTCTGGCACGCTCAGTGTCCAGTAACTCAGGAGCAAAGCGAGACAACATGTCAAACTCCTGATCATACACTTCCATAGTCATCTGACCCTGCTTCAGGTCCAGGAACTCTTGGCGCTTTACATCCTTAAGATTAGCAGAGAAAAATTTATCATAAAAGCTCTCCTTAAACTGCTCCGAGGTGATCTGACTCACATCACCTCCAAGCATCCTCTCTACAGACCGCCACCAAACCATACCCCTGTCTCTAAGTAGAAATACTGCACACTGGACCTTCTGGTCCTCGGGGCACCTCATGTAACGGAAGATGGCCTCCACAGAAGACAACTACAATTCCACCTTGGAAGGATCTTCTAGTGATCCATTAAAAGTCTAAGGGTCGTACTTCCTGAAATCCCTCAAGTGCTTAGCCTCCACTGACAACTGATCCAGCACATACCGTTGCTGCTGCTGGACAGTAGGCTCGGGAGTGGGAGCGGCAGGTGCTGGTGCAGGTGCAGACTGACTCTGAGTCAAAATAGCAGTAATAATGTCGGCGAACCTCTGCTCTAACCGGGACGACAAGGCAGCAAGGTCCACATGAGTAACTGGCGCAGCAGGGACACCATGGTCTACAAAGCCATCAGCAGGCTGACTACGCCCTGCTCCTCTACCTCGACCTCGGCCTCGACCACCCCTACGTGCACCTCTCCTTGGCGGCATTTTCCTAATAACCACCATTAGTTCCTTTAGTCTCAAAACATAAAATACTTCAGGTATCCTAGATTAGCTTAGGCAAAGCCACACATAACCCATACAAATTAATCATAAAACATACCTGGCGAGTGACGAAGGATTGGATTAGTCATAGGGACACGAAAACATAGACTTACATCATAAGTCAGTCTACAGAACCTAAACTTAGGCTCTGATACCAACTGTAACGACCCGACTTTCTAGAACAAACGAGGTCATTACTACGACTCCAGAGAAAAAGACCAATTTTAATAAACATGAACTTTTCATAAATTAGCAAAATAATTTTGAAATAACAAATACGGAAATCAACAAGTGTGGGCCCACGTAAAAAAACAACAAAATACAAAATGATCATTTAACTAGTACGAAGTCAAAAGTTTCGAAGTTAAAGACACAACAGTCAGACCCAAAATAATCACACATCCAAATGAACCAAAACGAGCGCGCGACGAAAAAAACAACGGTACCTTCAACAAAACCACACAAACTTCAATCCAAAAAAATCATAAATTATTTCTTAACTTTAACCCAAACCAAAAACTACAAGGTGGGTTCTAAATCGAGAAAAATCTGGCGCGAAACTCACCAAAAATGCCAAGAAGGTGGCTGGAAGGGTGAGGACGGCACAAATCCAAGTTGGGCAACGCGGACGACGGCGGAAGGACGAACGACGCGAAAAGGATCCTTGTGCGGACTGGCGGCGCGATTGGACGGCGGCGGCGTGCTGGCGGCGCGAACGAAGGCCACGGACTAGGCGGCGGCGTGCTGGTCTGGAGAAGAAGAAAAGAAAGAAGAAAGATGGGGGGCTGGTTTAGGAGAAAGAGGAAAAAGAAACAAGAAAGAAAAAGAAAGGGGGGGGCGCGAAGAAGAAAAGGAAAAAGAAGGGGGGGCTGCCGCCTCTTTTTTTTTTTTTTATTTCAAAATAATAATATTATTAATATTAATAATAATAATAATAATAATAAAACTATTATTATTATTATTATATTATATTATTAACTCAAAAAAAAAAAAACTCAAATAACCTTAAAAAATTCCCAAAATTTCGCGGCGTTACAATAACATTTCCATTCTAAGAAAATAGATGAGCAAATTAGAGGTTCAATAGTTGTTCTTGAGTTTTGTGTGTTTTTATGGTATAACAGTTGAGACGACGATTAATATGGATGGGAAGAATAGGGATGGAGTCAGCTTCTGAGTTCGGCTCTGCCTCGAGGTGGGAACTACATTAACAAGCCGCATGCGACGAAGAAGGCTGCGGCCCAACACTCTGGCTACCAACCATGA

mRNA sequence

ATGGGTTTAAAGAGAGAGTCCATATTTTTCAGTGTTATGCTTCTTCTTCTTCTTTCATTTATGGCAACAGGGAGACTCATCCATTCTACTTCACTTCATGGAGATTGTAATCAGCTTCTGAGTTCGGCTCTGCCTCGAGGTGGGAACTACATTAACAAGCCGCATGCGACGAAGAAGGCTGCGGCCCAACACTCTGGCTACCAACCATGA

Coding sequence (CDS)

ATGGGTTTAAAGAGAGAGTCCATATTTTTCAGTGTTATGCTTCTTCTTCTTCTTTCATTTATGGCAACAGGGAGACTCATCCATTCTACTTCACTTCATGGAGATTGTAATCAGCTTCTGAGTTCGGCTCTGCCTCGAGGTGGGAACTACATTAACAAGCCGCATGCGACGAAGAAGGCTGCGGCCCAACACTCTGGCTACCAACCATGA

Protein sequence

MGLKRESIFFSVMLLLLLSFMATGRLIHSTSLHGDCNQLLSSALPRGGNYINKPHATKKAAAQHSGYQP

Homology

[Close]

BLAST of PI0019374 vs. ExPASy TrEMBL
Match: A0A0A0KXI8 (Aconitate hydratase OS=Cucumis sativus OX=3659 GN=Csa_4G017200 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.2e-17
Identity = 56/82 (68.29%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 1  MGLKRESIFFSVMLLLLLSFMATGR-LIHSTSLHGDC------------NQLLSSALPRG 60
          MGLKRESIFFSVMLLLLLS MATGR L HSTSLH D             ++ LSSALPRG
Sbjct: 1  MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETMNMDGKNRDGSRFLSSALPRG 60

Query: 61 GNYINKPHATKKAAAQHSGYQP 70
          GNYINKPHA +KAA   +GYQP
Sbjct: 61 GNYINKPHAAEKAAVGRAGYQP 82

[Close]

BLAST of PI0019374 vs. ExPASy TrEMBL
Match: A0A5A7TTS9 (Aconitate hydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00860 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.4e-10
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 21 MATGRLIHSTSLHGDC------------NQLLSSALPRGGNYINKPHATKKAAAQHSGYQ 70
          MATGRLI+STSLHGD             ++LLS+ALPRGGNYIN PHA +KAA + SGYQ
Sbjct: 1  MATGRLIYSTSLHGDFETMNMDGKNRDGSRLLSTALPRGGNYINNPHAAEKAAVRRSGYQ 60

[Close]

BLAST of PI0019374 vs. NCBI nr
Match: KGN53132.1 (hypothetical protein Csa_014795 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-16
Identity = 56/82 (68.29%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 1  MGLKRESIFFSVMLLLLLSFMATGR-LIHSTSLHGDC------------NQLLSSALPRG 60
          MGLKRESIFFSVMLLLLLS MATGR L HSTSLH D             ++ LSSALPRG
Sbjct: 1  MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETMNMDGKNRDGSRFLSSALPRG 60

Query: 61 GNYINKPHATKKAAAQHSGYQP 70
          GNYINKPHA +KAA   +GYQP
Sbjct: 61 GNYINKPHAAEKAAVGRAGYQP 82

[Close]

BLAST of PI0019374 vs. NCBI nr
Match: KAA0044639.1 (Aconitate hydratase [Cucumis melo var. makuwa] >TYK16949.1 Aconitate hydratase [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 21 MATGRLIHSTSLHGDC------------NQLLSSALPRGGNYINKPHATKKAAAQHSGYQ 70
          MATGRLI+STSLHGD             ++LLS+ALPRGGNYIN PHA +KAA + SGYQ
Sbjct: 1  MATGRLIYSTSLHGDFETMNMDGKNRDGSRLLSTALPRGGNYINNPHAAEKAAVRRSGYQ 60

[Close]

BLAST of PI0019374 vs. NCBI nr
Match: KAG6600180.1 (hypothetical protein SDJN03_05413, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.0 bits (149), Expect = 2.3e-06
Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 1  MGLKRESIFFSVMLLLLLSFMATGRLIHSTSL----------HGDC---NQLLSSALPRG 60
          MGLKR  I  SVM+L+L+  MATGR + +T+L           G+     QLLSSA PRG
Sbjct: 1  MGLKRAPILLSVMVLVLV-HMATGRPVRTTTLPIADFETMNMSGETAFGTQLLSSARPRG 60

Query: 61 GNYINKPHATKKAAAQHSGYQP 70
          GNYI+ P A  KAA Q SGY P
Sbjct: 61 GNYIDNPQAANKAAIQTSGYHP 81

The following BLAST results are available for this feature:

BLAST of PI0019374 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXI8	9.2e-17	68.29	Aconitate hydratase OS=Cucumis sativus OX=3659 GN=Csa_4G017200 PE=4 SV=1	[more]
A0A5A7TTS9	6.4e-10	62.30	Aconitate hydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G...	[more]

BLAST of PI0019374 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53132.1	1.9e-16	68.29	hypothetical protein Csa_014795 [Cucumis sativus]	[more]
KAA0044639.1	1.3e-09	62.30	Aconitate hydratase [Cucumis melo var. makuwa] >TYK16949.1 Aconitate hydratase [...	[more]
KAG6600180.1	2.3e-06	51.22	hypothetical protein SDJN03_05413, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0019374 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019374.1	PI0019374.1	mRNA