PI0019358 (gene) Melon (PI 482460) v1

Overview
NamePI0019358
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTrafficking protein particle complex subunit
Locationchr05: 4146601 .. 4151196 (-)
RNA-Seq ExpressionPI0019358
SyntenyPI0019358
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTTTTGAAAAAAGTTCTTTCTTTTTCTTTTTTCATAACAATCCGTAGAAAGTCGTCGTAATTACATTTTATCCGCCACTGGCAACTCCACCACAGTCCCAAGCTCCCCGAAACTCCCCCTTAAGATCGGCGTTTACTGAAACTGGATTTTGCGCCTTCCAATCTACGTTCTTCCCCACACTTAGTCCTTATTTACAACCATATTTATTCTCATTTCCTTCATAATTCTTCAGAATTTGGGTAGATCTAAAGACGATGGCAGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGTTTGATCTTCTACAAGGTAATCAACCAATTCAAACTACTTGTTCATGCAATTAGAAACACAAATTTCCGTTAATTCCCACCTGGGTTGAGAATTTTTATGCTTTATTTCGTTTCTGGGAACCCCAAATCAAGATTTCAGTTTTTTCATCTCATATTGCAAAGATATATAATTCGGTATGCGGGTATTCTATATGGATTGAATCTCTTATTGGGTTTGTTTTAAAATTTAGGATTATGGGTCTGCTGGACGAATGGATACGAATGATAGTTTGAGAGTGGCGAGTTTGTGGCATTCTATGCATGCCATTTCCCAGCAGCTTTCACCCATAGCTGGTTGTTCGGGTGTTGAACTTCTTGAAGCTGATACTTTCGACCTCCATTGCTTCCAGTCACTCACTGGTACATTTTTCCTTCCTGTATTTTGTTTACTTTTTTGCTTCAAGCACATGGATTCTGCCTCAAATTCTGTGATCCAAAGATAAGCAGTTAAGTGAATCCCAAAATGGGAAAGCACAGCTGAAGTTCTAGAAACGTTATTGATCTTTGCTTGTTGAGTTCGAGAATTTATGAGAATGGGCGAATGGGGATTCAAACATAACTTTTGGTTGAAATTATTGTGCTTTAATTGCTTGAGTTTTGCTTGATTGTAGAAATGATATTGATGCTCTAGTTGAAAAATGTAGCTTTTTTTTTACAATCATGCTATTGTCTCCATAGATATGAGAGTGGGGATTCAAATATAAATTTTGGTTATTGAAATTGATATTTGTTCAGTTTCTTGTTTCGAGTTCAAGAATGTATGAGAGTGGGGATTCGAACATAAATTTTGGTTGAGATTATTATATCTTGATTAGTTGAGTTGTACTCAGATAGGTAGAAATGGCATTAATCCTTTATTAGAAAAATGTAGCTTTTTATAGCCGTACTAATATACTATAGTCTCCTTCACAAATATTTTTATGCTGTCAAACTTTTGGAGGAAAAAACTAGCATGTTTGTGTTTAATCTTTTGTCATTACACTTTGCTGCTTGCATAGGGGGAGGAGTTAAAGATTGTTTTGATATGGAGATGAATGGCTTTTGGTGTGGAGGATTAATAATTTCTTCATTATCAACCAACCTACATAAGAAATAGACATGCTTGTTCCGTAGTATAATTTTATATTTCCTTGTTCAAATTTTTTTATCTCTGCAAAGTCTCACGGCAGTAACTTCATAAAGAACCAGAATCATGGATGGAAATTGTCTGTTGCAGGGACAAAGTTTTTTGTTGTGTGTGAGCCTGGGACTCAGTACATGGAGAGTCTTCTGAAGTACATTTATGAGCTATACACAGATTTTGTCTTGAAGAATCCATTCTACGAGATGGAGATGCCTATACGGTGTGAGCTCTTTGACATCAACCTAGCGCAGGCAGTGCAAAAAGATCGTGTTGCTTTGCTTGGCCGATGAGCCTAGGACATCCTTCATTTTGTCAGTATTAAATTCAAGAAAAAAAGGCTCATGATATTATTGTGCATTACTTGATAATTTACCATCCTTAATGCTAAATGTACTCCGTTCCTAGTGAATCATGTGAGATTTGGTGGAAATAGAATGTTTCTTTTCAGTGTTGTTCATCAGGAAGTCAGGGTTAATTTTATACCCATTTTTTGTCAATTGTATACAGTTGTGGATCCAGTTAAATGACAGAGCAATGTTATAAGCTTTTGGGATATGGTTAATTTAAGCAGGCAAAGTATTTACATTTTACTTCGACCAATTTAGATGAATGAAAGCATCAACTTCATGATGTTCATCGTTGAAATATAACTATGAAGAAATACAAGATAAACCACCCTTGAGCACACTAACTCAAGCCCTAGATCACTAAAAAGTTGCCTACCTTCTCTCACTCACCCTCTCTTTATAACAAGACTCCGTAACTAACTTCCTACCAAATTGCCCCTAAACCCCTTAATACTACCATACAAGTATATTCTTATCTACGTACATTACACTATAACATAGCTGTGTAATGAGGTTGTATGCGCTTAAGTCTTGTTGTATGCGCTTAAGTCTGGCAGGGATGAGCGAATAGATCAAGTGGCGAGAACATGACCCGCGACCGCTGCCATTGCAATGAGGATTCTCAATTCCTTCTTCCTCTCAACCAATGGGCTATCTGGTGTTGGTGGTCTACAGGAAGCCTCTCCTCTTGGTGCTGCTCGCTCAGCCTCGACCATATTGGTATAGTCTTTCTGATTGAAGTAAGAAATCGCCTGCACGAATGCCTGCCTGACCTGGCTGCAACTGATTCTGCAAGTCTCGAGAGCAGCTTTCATTACTGGTTCATCAGTGCTGGCTAGAAGTTCAACAATGAACTGATAGGTCCCGGAAGTGTTTCTCAGCACTTGGTTATTTGCTAGCAAGGCCAAGCCAACATCATCTGCTGGACCTTTCAGGTTTTCATTGAAGGTTTTGTTGCAAAACCCATAATCCTCATTTTGACGGCATATTCGATTGATCCGCTGCTGTGTTGCCAGGTCACCGAAAGCTGGGTGAACAATGAGGAGAATGAGGAAGAAGGTTAGCAGTTGTGAAGAATATGAGAAAGCCATTGTTACTTGGGTAGCTAATGTTTGGAATTCTGACAAAAGCAGAATAAGGTGAGAGTGGCTTTTATAGGATGCTTTGTGCTGCTATTTTATGCGTAATCTTGGCATGCTTTCTTATAAAATTTTCCTTGATTTTCTGGTCCATGATTTCAGTTCAAATAACCCAAATTAAAGTAAAAAGAAAGATATACATTAATTGCTGGTTTATACTAAGCTACAGTAGATCTTTTTGCATATCGTTTTGGAAAGTATAAGTTGAGAGAAGCAAATCTGATCTGCGTACTACAGTGGTAGTGGTACATCCAAGAATTTAAATTCCTTCCTTGTATGTTATACTCTTTTTCTAAACTTCCATGATTCACATTTCTTTTCCATATATTTACAAAATTTTCCAAGTGTATCTCTTTCATCATTTACTTTTCTTTCTCTAGGGATAAATCAACACAATACGTAGAAGAAAGATTCAACTAACAAACTTATTTAGTTCTTGTTCATCAGGCAAACTCAAACAAAACAATAAGAACAATAAGGGATAGAGAGAAAAAAAAACATGTTCATTGTTTCATTACTTCTTGCTTTTATCAAACATTTACTGAATGTGACCATTGGCAGCAGCACATTGATTTACGCTTATTGAAATATCACAACATAGGATCATAAGTTTGTTCATGACTTCAATATGCAATGAATTGATTCTAATGGCTTGACTACACCCTAGAACAAGTCTCTTTGATGCTATCAATGGACCATTCTCTCTGAAGATCTTCTGCTGTGAGAACTGATAAGCTTTTTGGATATTTGATTGAATTTCATGGTAATACTCCACACAATGCTCAAAACTTTTCTTCTCCTCAGGATCACTCTCATTCTTACTTAGTTTGTAGAAGGTATCAAGGTTTTGATTTGCTTGTTTCTTTGTCAGATTGCTGCATATAAGTGAGAGCTTAGGGAAGTCGGCTGAGACGGTTTGGGAATCATTATTAAGGATTTTCTCACAGAGTGACGGATTGAAGGTTTTAGAGCAAATGGTGACCAGATTTTCATGGGGGATTCCATGAGAAGGGAAAATGGTTAGGGAAAAAGCTGCCAAAAGAAGAGCTGGGATGAAAGAGGTAAGATTTAGACAGCAATTCATTGTTGGTTTCTTAAAAGAACAGATCGTATGAGCAGTGGCTTTCTTTGGAAACTTAGAAGAAGCTGTTTAAATAATGAGTTTGGGAGAAAAAGTAACTGATTGTGCTTTGTAGGATGCCACTTTCTTTTCTTCAAGTACATTACAGGAAAAAAGTTAAGGATCCTTCTTGGAAAAACAGCCACATGGGCTACATGCAAGTTAAACTCTTGAGAAACAACAATGGAAAGAGCTGTACATCTCCTTCAGTGAGTTCAAAGAACTTTTTCTACTTGTTCACGTTTTACATTTCCTATTAACCCAATACAATTTGTTGACTTTGGAAACTGCTTTTAAAGGTTAGAGGTTTGAGATCTTTTAAGAAAATAATATAAATTTTCATCTTTGGCTGATTTATACTTGTCTGGTTGGTTTGGCCAAATGTGTTTTTGCTTCAACTTTTTAATCTCTTTTTAAATTGAGATTTTATAGGTGCATTTGGTTCTTAAAATTTCAAAGGGACTATTTTAGTTTTTAGAGTTTCTAAGAAAAAGTTTAAAACAACTAATAGAACGGTTGTACTTAAA

mRNA sequence

ATATTTTTGAAAAAAGTTCTTTCTTTTTCTTTTTTCATAACAATCCGTAGAAAGTCGTCGTAATTACATTTTATCCGCCACTGGCAACTCCACCACAGTCCCAAGCTCCCCGAAACTCCCCCTTAAGATCGGCGTTTACTGAAACTGGATTTTGCGCCTTCCAATCTACGTTCTTCCCCACACTTAGTCCTTATTTACAACCATATTTATTCTCATTTCCTTCATAATTCTTCAGAATTTGGGTAGATCTAAAGACGATGGCAGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGTTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGATACGAATGATAGTTTGAGAGTGGCGAGTTTGTGGCATTCTATGCATGCCATTTCCCAGCAGCTTTCACCCATAGCTGGTTGTTCGGGTGTTGAACTTCTTGAAGCTGATACTTTCGACCTCCATTGCTTCCAGTCACTCACTGGGACAAAGTTTTTTGTTGTGTGTGAGCCTGGGACTCAGTACATGGAGAGTCTTCTGAAGTACATTTATGAGCTATACACAGATTTTGTCTTGAAGAATCCATTCTACGAGATGGAGATGCCTATACGGTGTGAGCTCTTTGACATCAACCTAGCGCAGGCAGTGCAAAAAGATCGTGTTGCTTTGCTTGGCCGATGAGCCTAGGACATCCTTCATTTTGTCAGTATTAAATTCAAGAAAAAAAGGCTCATGATATTATTGTGCATTACTTGATAATTTACCATCCTTAATGCTAAATGTACTCCGTTCCTAGTGAATCATGTGAGATTTGGTGGAAATAGAATGTTTCTTTTCAGTGTTGTTCATCAGGAAGTCAGGGTTAATTTTATACCCATTTTTTGTCAATTGTATACAGTTGTGGATCCAGTTAAATGACAGAGCAATGTTATAAGCTTTTGGGATATGGTTAATTTAAGCAGGCAAAGTATTTACATTTTACTTCGACCAATTTAGATGAATGAAAGCATCAACTTCATGATGTTCATCGTTGAAATATAACTATGAAGAAATACAAGATAAACCACCCTTGAGCACACTAACTCAAGCCCTAGATCACTAAAAAGTTGCCTACCTTCTCTCACTCACCCTCTCTTTATAACAAGACTCCGTAACTAACTTCCTACCAAATTGCCCCTAAACCCCTTAATACTACCATACAAGTATATTCTTATCTACGTACATTACACTATAACATAGCTGTGTAATGAGGTTGTATGCGCTTAAGTCTTGTTGTATGCGCTTAAGTCTGGCAGGGATGAGCGAATAGATCAAGTGGCGAGAACATGACCCGCGACCGCTGCCATTGCAATGAGGATTCTCAATTCCTTCTTCCTCTCAACCAATGGGCTATCTGGTGTTGGTGGTCTACAGGAAGCCTCTCCTCTTGGTGCTGCTCGCTCAGCCTCGACCATATTGGTATAGTCTTTCTGATTGAAGTAAGAAATCGCCTGCACGAATGCCTGCCTGACCTGGCTGCAACTGATTCTGCAAGTCTCGAGAGCAGCTTTCATTACTGGTTCATCAGTGCTGGCTAGAAGTTCAACAATGAACTGATAGGTCCCGGAAGTGTTTCTCAGCACTTGGTTATTTGCTAGCAAGGCCAAGCCAACATCATCTGCTGGACCTTTCAGGTTTTCATTGAAGGTCACCGAAAGCTGGGTGAACAATGAGGAGAATGAGGAAGAAGGTTAGCAGTTGTGAAGAATATGAGAAAGCCATTGTTACTTGGGTAGCTAATGTTTGGAATTCTGACAAAAGCAGAATAAGGTGAGAGTGGCTTTTATAGGATGCTTTGTGCTGCTATTTTATGCGTAATCTTGGCATGCTTTCTTATAAAATTTTCCTTGATTTTCTGGTCCATGATTTCAGTTCAAATAACCCAAATTAAAGTAAAAAGAAAGATATACATTAATTGCTGGTTTATACTAAGCTACAGTAGATCTTTTTGCATATCGTTTTGGAAAGTATAAGTTGAGAGAAGCAAATCTGATCTGCGTACTACAGTGGTAGTGGTACATCCAAGAATTTAAATTCCTTCCTTGTATGTTATACTCTTTTTCTAAACTTCCATGATTCACATTTCTTTTCCATATATTTACAAAATTTTCCAAGTGTATCTCTTTCATCATTTACTTTTCTTTCTCTAGGGATAAATCAACACAATACGTAGAAGAAAGATTCAACTAACAAACTTATTTAGTTCTTGTTCATCAGGCAAACTCAAACAAAACAATAAGAACAATAAGGGATAGAGAGAAAAAAAAACATGTTCATTGTTTCATTACTTCTTGCTTTTATCAAACATTTACTGAATGTGACCATTGGCAGCAGCACATTGATTTACGCTTATTGAAATATCACAACATAGGATCATAAGTTTGTTCATGACTTCAATATGCAATGAATTGATTCTAATGGCTTGACTACACCCTAGAACAAGTCTCTTTGATGCTATCAATGGACCATTCTCTCTGAAGATCTTCTGCTGTGAGAACTGATAAGCTTTTTGGATATTTGATTGAATTTCATGATTGCTGCATATAAGTGAGAGCTTAGGGAAGTCGGCTGAGACGGTTTGGGAATCATTATTAAGGATTTTCTCACAGAGTGACGGATTGAAGGTTTTAGAGCAAATGGTGACCAGATTTTCATGGGGGATTCCATGAGAAGGGAAAATGGTTAGGGAAAAAGCTGCCAAAAGAAGAGCTGGGATGAAAGAGGTAAGATTTAGACAGCAATTCATTGTTGGTTTCTTAAAAGAACAGATCGTATGAGCAGTGGCTTTCTTTGGAAACTTAGAAGAAGCTGTTTAAATAATGAGTTTGGGAGAAAAAGTAACTGATTGTGCTTTGTAGGATGCCACTTTCTTTTCTTCAAGTACATTACAGGAAAAAAGTTAAGGATCCTTCTTGGAAAAACAGCCACATGGGCTACATGCAAGTTAAACTCTTGAGAAACAACAATGGAAAGAGCTGTACATCTCCTTCAGTGAGTTCAAAGAACTTTTTCTACTTGTTCACGTTTTACATTTCCTATTAACCCAATACAATTTGTTGACTTTGGAAACTGCTTTTAAAGGTTAGAGGTTTGAGATCTTTTAAGAAAATAATATAAATTTTCATCTTTGGCTGATTTATACTTGTCTGGTTGGTTTGGCCAAATGTGTTTTTGCTTCAACTTTTTAATCTCTTTTTAAATTGAGATTTTATAGGTGCATTTGGTTCTTAAAATTTCAAAGGGACTATTTTAGTTTTTAGAGTTTCTAAGAAAAAGTTTAAAACAACTAATAGAACGGTTGTACTTAAA

Coding sequence (CDS)

ATGGCAGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGTTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGATACGAATGATAGTTTGAGAGTGGCGAGTTTGTGGCATTCTATGCATGCCATTTCCCAGCAGCTTTCACCCATAGCTGGTTGTTCGGGTGTTGAACTTCTTGAAGCTGATACTTTCGACCTCCATTGCTTCCAGTCACTCACTGGGACAAAGTTTTTTGTTGTGTGTGAGCCTGGGACTCAGTACATGGAGAGTCTTCTGAAGTACATTTATGAGCTATACACAGATTTTGTCTTGAAGAATCCATTCTACGAGATGGAGATGCCTATACGGTGTGAGCTCTTTGACATCAACCTAGCGCAGGCAGTGCAAAAAGATCGTGTTGCTTTGCTTGGCCGATGA

Protein sequence

MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
Homology
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BLAST of PI0019358 vs. ExPASy Swiss-Prot
Match: Q54UU1 (Trafficking protein particle complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=trappc4 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 7.3e-34
Identity = 65/125 (52.00%), Postives = 93/125 (74.40%), Query Frame = 0 

Query: 4   IYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAG-CSGVELL 63
           I S+YI+NK+G LI+  D+G+  ++  N  +R+ S +HS+HAI+  LSP++G  SG+E++
Sbjct: 3   INSIYILNKAGTLIYQNDFGNTEKLSHNSYIRLGSTFHSLHAIASNLSPVSGSSSGIEVI 62

Query: 64  EADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRCEL 123
           E + F L CFQ+ TG KF+V+ +P  Q +E LL  +YELYTD+VLKNPFYE+EM IRC+L
Sbjct: 63  ETEAFKLQCFQTHTGIKFYVIADPNHQQLEELLHGVYELYTDYVLKNPFYEIEMQIRCDL 122

Query: 124 FDINL 128
           FD  L
Sbjct: 123 FDYKL 127

[Close]
BLAST of PI0019358 vs. ExPASy Swiss-Prot
Match: Q2TBL9 (Trafficking protein particle complex subunit 4 OS=Bos taurus OX=9913 GN=TRAPPC4 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-31
Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 0 

Query: 27  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEP 86
           R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P
Sbjct: 102 RLTSNEKLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADP 161

Query: 87  GTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQ 133
               ++SLL+ IYE+Y+DF LKNPFY +EMPIRCELFD NL  A++
Sbjct: 162 RQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207

[Close]
BLAST of PI0019358 vs. ExPASy Swiss-Prot
Match: Q9ES56 (Trafficking protein particle complex subunit 4 OS=Mus musculus OX=10090 GN=Trappc4 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-31
Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 0 

Query: 27  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEP 86
           R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P
Sbjct: 102 RLTSNEKLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADP 161

Query: 87  GTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQ 133
               ++SLL+ IYE+Y+DF LKNPFY +EMPIRCELFD NL  A++
Sbjct: 162 RQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207

[Close]
BLAST of PI0019358 vs. ExPASy Swiss-Prot
Match: Q69BT7 (Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-31
Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 0 

Query: 27  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEP 86
           R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P
Sbjct: 102 RLTSNEKLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADP 161

Query: 87  GTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQ 133
               ++SLL+ IYE+Y+DF LKNPFY +EMPIRCELFD NL  A++
Sbjct: 162 RQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207

[Close]
BLAST of PI0019358 vs. ExPASy Swiss-Prot
Match: Q9Y296 (Trafficking protein particle complex subunit 4 OS=Homo sapiens OX=9606 GN=TRAPPC4 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.6e-31
Identity = 61/106 (57.55%), Postives = 82/106 (77.36%), Query Frame = 0 

Query: 27  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEP 86
           R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHC+Q+LTG KF V+ +P
Sbjct: 102 RLTSNEKLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADP 161

Query: 87  GTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQ 133
               ++SLL+ IYE+Y+DF LKNPFY +EMPIRCELFD NL  A++
Sbjct: 162 RQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207

[Close]
BLAST of PI0019358 vs. ExPASy TrEMBL
Match: A0A0A0LJ20 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_2G034720 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.4e-74
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+MESLLKYIYELYTDFVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINLAQAVQKDRVALLGR
Sbjct: 121 ELFDINLAQAVQKDRVALLGR 141

[Close]
BLAST of PI0019358 vs. ExPASy TrEMBL
Match: A0A5A7TWY1 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00730 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 9.8e-74
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+MESLLKYIYELYTDFVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINLAQAVQK+RVALLGR
Sbjct: 121 ELFDINLAQAVQKERVALLGR 141

[Close]
BLAST of PI0019358 vs. ExPASy TrEMBL
Match: A0A1S3BVQ7 (Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC103494018 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 9.8e-74
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+MESLLKYIYELYTDFVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINLAQAVQK+RVALLGR
Sbjct: 121 ELFDINLAQAVQKERVALLGR 141

[Close]
BLAST of PI0019358 vs. ExPASy TrEMBL
Match: A0A6J1DUU4 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111023297 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.8e-72
Identity = 135/141 (95.74%), Postives = 139/141 (98.58%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGIE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+ME LLKYIYELYTDFVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINL+QAVQKDRVAL GR
Sbjct: 121 ELFDINLSQAVQKDRVALFGR 141

[Close]
BLAST of PI0019358 vs. ExPASy TrEMBL
Match: A0A6J1KK16 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111493886 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 134/141 (95.04%), Postives = 137/141 (97.16%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGTE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGT +ME LLKYIYELYTD+VLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTLHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINL QAVQKDRVALLGR
Sbjct: 121 ELFDINLVQAVQKDRVALLGR 141

[Close]
BLAST of PI0019358 vs. NCBI nr
Match: KGN61053.2 (hypothetical protein Csa_021294 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 6.9e-74
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 444 MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 503

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+MESLLKYIYELYTDFVLKNPFYEMEMPIRC
Sbjct: 504 LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 563

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINLAQAVQKDRVALLGR
Sbjct: 564 ELFDINLAQAVQKDRVALLGR 584

[Close]
BLAST of PI0019358 vs. NCBI nr
Match: XP_004144741.1 (trafficking protein particle complex subunit 4 [Cucumis sativus] >XP_038889173.1 trafficking protein particle complex subunit 4 [Benincasa hispida])

HSP 1 Score: 287.3 bits (734), Expect = 6.9e-74
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+MESLLKYIYELYTDFVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINLAQAVQKDRVALLGR
Sbjct: 121 ELFDINLAQAVQKDRVALLGR 141

[Close]
BLAST of PI0019358 vs. NCBI nr
Match: XP_008453237.1 (PREDICTED: trafficking protein particle complex subunit 4 [Cucumis melo] >KAA0048113.1 trafficking protein particle complex subunit 4 [Cucumis melo var. makuwa] >TYJ96439.1 trafficking protein particle complex subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+MESLLKYIYELYTDFVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINLAQAVQK+RVALLGR
Sbjct: 121 ELFDINLAQAVQKERVALLGR 141

[Close]
BLAST of PI0019358 vs. NCBI nr
Match: XP_022156391.1 (trafficking protein particle complex subunit 4 [Momordica charantia] >XP_022156392.1 trafficking protein particle complex subunit 4 [Momordica charantia] >XP_022156393.1 trafficking protein particle complex subunit 4 [Momordica charantia])

HSP 1 Score: 281.6 bits (719), Expect = 3.8e-72
Identity = 135/141 (95.74%), Postives = 139/141 (98.58%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGIE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+ME LLKYIYELYTDFVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINL+QAVQKDRVAL GR
Sbjct: 121 ELFDINLSQAVQKDRVALFGR 141

[Close]
BLAST of PI0019358 vs. NCBI nr
Match: XP_041018648.1 (trafficking protein particle complex subunit 4 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 278.9 bits (712), Expect = 2.5e-71
Identity = 134/141 (95.04%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP+AGCSG+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQ+ME LLK IYELYTD+VLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKAIYELYTDYVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINL QAVQKDRVALLGR
Sbjct: 121 ELFDINLTQAVQKDRVALLGR 141

[Close]
BLAST of PI0019358 vs. TAIR 10
Match: AT5G02280.1 (SNARE-like superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 2.0e-71
Identity = 127/141 (90.07%), Postives = 134/141 (95.04%), Query Frame = 0 

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKD G+ GRMDTNDSLRVASLWHSMHAISQQLSP+ GCSG+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDCGTKGRMDTNDSLRVASLWHSMHAISQQLSPVNGCSGIE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSL GTKFFVVCEPGT +MESLL+YIYELYTD+VLKNPFYE+EMPIRC
Sbjct: 61  LLEADTFDLHCFQSLPGTKFFVVCEPGTPHMESLLRYIYELYTDYVLKNPFYEIEMPIRC 120

Query: 121 ELFDINLAQAVQKDRVALLGR 142
           ELFDINL QAVQ DRVALLGR
Sbjct: 121 ELFDINLTQAVQSDRVALLGR 141

[Close]
BLAST of PI0019358 vs. TAIR 10
Match: AT1G51160.1 (SNARE-like superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 39/144 (27.08%), Postives = 68/144 (47.22%), Query Frame = 0 

Query: 5   YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPI--------- 64
           + +Y+ N++G  + YK++           D   +  L  S+ +++ ++ P+         
Sbjct: 24  HMMYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGLLFSLKSLTAKMDPVNADKGNLGV 83

Query: 65  -----AGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLK 124
                 GCS       +T+ L   ++ +G K  +V  P T  +   LKYIY LY ++V+K
Sbjct: 84  PQLPGQGCS-FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVK 143

Query: 125 NPFYEMEMPIRCELFDINLAQAVQ 133
           NP Y    PI+ ELF+  L Q V+
Sbjct: 144 NPIYSPGSPIKSELFNTALDQYVR 166

[Close]
BLAST of PI0019358 vs. TAIR 10
Match: AT1G51160.2 (SNARE-like superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 39/144 (27.08%), Postives = 68/144 (47.22%), Query Frame = 0 

Query: 5   YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPI--------- 64
           + +Y+ N++G  + YK++           D   +  L  S+ +++ ++ P+         
Sbjct: 24  HMMYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGLLFSLKSLTAKMDPVNADKGNLGV 83

Query: 65  -----AGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQYMESLLKYIYELYTDFVLK 124
                 GCS       +T+ L   ++ +G K  +V  P T  +   LKYIY LY ++V+K
Sbjct: 84  PQLPGQGCS-FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVK 143

Query: 125 NPFYEMEMPIRCELFDINLAQAVQ 133
           NP Y    PI+ ELF+  L Q V+
Sbjct: 144 NPIYSPGSPIKSELFNTALDQYVR 166

The following BLAST results are available for this feature:
BLAST of PI0019358 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q54UU17.3e-3452.00Trafficking protein particle complex subunit 4 OS=Dictyostelium discoideum OX=44... [more]
Q2TBL93.4e-3158.49Trafficking protein particle complex subunit 4 OS=Bos taurus OX=9913 GN=TRAPPC4 ... [more]
Q9ES563.4e-3158.49Trafficking protein particle complex subunit 4 OS=Mus musculus OX=10090 GN=Trapp... [more]
Q69BT73.4e-3158.49Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=... [more]
Q9Y2967.6e-3157.55Trafficking protein particle complex subunit 4 OS=Homo sapiens OX=9606 GN=TRAPPC... [more]
BLAST of PI0019358 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ203.4e-7499.29Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_2... [more]
A0A5A7TWY19.8e-7498.58Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194... [more]
A0A1S3BVQ79.8e-7498.58Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A6J1DUU41.8e-7295.74Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1KK162.7e-7195.04Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
BLAST of PI0019358 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61053.26.9e-7499.29hypothetical protein Csa_021294 [Cucumis sativus][more]
XP_004144741.16.9e-7499.29trafficking protein particle complex subunit 4 [Cucumis sativus] >XP_038889173.1... [more]
XP_008453237.12.0e-7398.58PREDICTED: trafficking protein particle complex subunit 4 [Cucumis melo] >KAA004... [more]
XP_022156391.13.8e-7295.74trafficking protein particle complex subunit 4 [Momordica charantia] >XP_0221563... [more]
XP_041018648.12.5e-7195.04trafficking protein particle complex subunit 4 [Juglans microcarpa x Juglans reg... [more]
BLAST of PI0019358 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02280.12.0e-7190.07SNARE-like superfamily protein [more]
AT1G51160.11.5e-1027.08SNARE-like superfamily protein [more]
AT1G51160.21.5e-1027.08SNARE-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 4..134
e-value: 8.9E-69
score: 244.5
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 4..133
e-value: 4.2E-53
score: 179.1
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 1..141
NoneNo IPR availableGENE3D3.30.450.70coord: 2..133
e-value: 2.0E-48
score: 166.4
NoneNo IPR availablePANTHERPTHR23249:SF17TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT-RELATEDcoord: 1..141
NoneNo IPR availableCDDcd14856TRAPPC4_synbindincoord: 5..130
e-value: 1.59212E-83
score: 238.957
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0019358.1PI0019358.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0030008 TRAPP complex