PI0019307 (gene) Melon (PI 482460) v1

Overview


Name	PI0019307
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DUF4283 domain-containing protein
Location	chr01: 20002051 .. 20002646 (-)
RNA-Seq Expression	PI0019307
Synteny	PI0019307

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGACCACAGTGGGGTAATACTTTGTAAAGTAGTTCCAGAAATGGTCACCATCAAGCCACTCAACACAAAAACTACTCCCAAGCTATGGTGGTTGGACATCATTCAGAGGAATTCCTCTACACTCTTGAAACTTAAATACTTTTAAAAATATTGGGAATGCTTGTGGTGGTTTTCTAGCCATAGCAAAGGATATAATGGAGAAAAAAGACTTAATGGAAGCAAAGATAAAAATTAGATACAACTATACATGTTTCATCCCAGCAAACATCGGAATCACTAATGAGCAAGGAAATGATTTTGTGATTCAAACTATTTGTAAGGCTGAAAGCAAATGGTTGACGGAAAGAAACATCAACATCCATGGTACTTTCAAAAGACAGGCAACAGTAAACTTTGATGAATTCAACTCTGAATCGGAGCTTTACAAGTTCGTCGGAAATGTTGTGTTACCATCGAAAAATTTTGAAATTCCCAACAGTAAAGCATTAAAGACAGAAGTGACTCCTGAAGGAAATCTCACACGAGCCAAGGCAGCATATCTAACCCATCATGACAAAATCGGAAACACAGCTAGGAAAATAAAAAAATGA

mRNA sequence

ATGGATGGACCACAGTGGGCCATAGCAAAGGATATAATGGAGAAAAAAGACTTAATGGAAGCAAAGATAAAAATTAGATACAACTATACATGTTTCATCCCAGCAAACATCGGAATCACTAATGAGCAAGGAAATGATTTTGTGATTCAAACTATTTGTAAGGCTGAAAGCAAATGGTTGACGGAAAGAAACATCAACATCCATGGTACTTTCAAAAGACAGGCAACAGTAAACTTTGATGAATTCAACTCTGAATCGGAGCTTTACAAGTTCGTCGGAAATGTTGTGTTACCATCGAAAAATTTTGAAATTCCCAACAGTAAAGCATTAAAGACAGAAGTGACTCCTGAAGGAAATCTCACACGAGCCAAGGCAGCATATCTAACCCATCATGACAAAATCGGAAACACAGCTAGGAAAATAAAAAAATGA

Coding sequence (CDS)

ATGGATGGACCACAGTGGGCCATAGCAAAGGATATAATGGAGAAAAAAGACTTAATGGAAGCAAAGATAAAAATTAGATACAACTATACATGTTTCATCCCAGCAAACATCGGAATCACTAATGAGCAAGGAAATGATTTTGTGATTCAAACTATTTGTAAGGCTGAAAGCAAATGGTTGACGGAAAGAAACATCAACATCCATGGTACTTTCAAAAGACAGGCAACAGTAAACTTTGATGAATTCAACTCTGAATCGGAGCTTTACAAGTTCGTCGGAAATGTTGTGTTACCATCGAAAAATTTTGAAATTCCCAACAGTAAAGCATTAAAGACAGAAGTGACTCCTGAAGGAAATCTCACACGAGCCAAGGCAGCATATCTAACCCATCATGACAAAATCGGAAACACAGCTAGGAAAATAAAAAAATGA

Protein sequence

MDGPQWAIAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINIHGTFKRQATVNFDEFNSESELYKFVGNVVLPSKNFEIPNSKALKTEVTPEGNLTRAKAAYLTHHDKIGNTARKIKK

Homology

[Close]

BLAST of PI0019307 vs. ExPASy TrEMBL
Match: A0A5D3BRD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001460 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.7e-22
Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 8   IAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINI 67
           + K IM  ++L+EAKI +RYNY  FIPA I I ++ G+ F++  +     KWL ER++ I
Sbjct: 17  VDKAIMNIENLLEAKINVRYNYCSFIPATIKIKDKNGHSFIVHIVTICSGKWLAERDVKI 76

Query: 68  HGTFKRQATVNFDEFNSESELYKFVGNVVLPSKNFEIPNSKALKTEVTPEGNLTRAK 125
           + +FKRQ  + FD FNSE++ + F  N+ + +  FEIP +K+L  E+T EGN T AK
Sbjct: 77  NSSFKRQVAIEFDNFNSEAKQFTFSVNLAILADEFEIPKNKSLMAELTLEGNPTHAK 133

[Close]

BLAST of PI0019307 vs. ExPASy TrEMBL
Match: A0A5D3DR13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00100 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 9.7e-21
Identity = 48/117 (41.03%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 13  MEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINIHGTFK 72
           M   +++EAKIK+RYNY  FIP+ I I ++ G+ F++ T+     KWL ER++ IHG+F+
Sbjct: 1   MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFR 60

Query: 73  RQATVNFDEFNSESELYKFVGNVVLPSKNFEIPNSKALKTEVTPEGNLTRAKAAYLT 130
           RQ  +NF+ FN +++ + F G++ +P   F+IP ++AL TE+T E + T A   ++T
Sbjct: 61  RQVAINFNNFNPKAKQFNFTGDLAIPISEFKIPRNRALMTELTNEEDPTIAPRKFMT 117

[Close]

BLAST of PI0019307 vs. ExPASy TrEMBL
Match: A0A5D3CPN2 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00870 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20
Identity = 46/95 (48.42%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 7   AIAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNIN 66
           A+AK+ MEK++L+EAKIK++YNYT F+PA+I + ++QG +FV+ T+   + +W  ERN+N
Sbjct: 162 AVAKETMEKENLIEAKIKVKYNYTGFVPASILLIDDQGENFVVYTVPPPKGRWFIERNVN 221

Query: 67  IHGTFKRQATVNFDEFNSESELYKFVGNVVLPSKN 102
            HGTFK +A  +FD  N  +E + F GN  +P KN
Sbjct: 222 FHGTFKIEAADDFDNLNPNAEKFTFAGNHAIPPKN 256

[Close]

BLAST of PI0019307 vs. ExPASy TrEMBL
Match: A0A5D3DZ07 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1810G00070 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.8e-20
Identity = 45/92 (48.91%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 8   IAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINI 67
           +A++    K+L+EA++KIRYNY+ F+PAN+ I +++GN F++Q +  +E KWL ERN+ +
Sbjct: 244 VAEETKTAKNLIEARLKIRYNYSGFLPANVKIFDQEGNKFIVQVVTHSEGKWLMERNVKL 303

Query: 68  HGTFKRQATVNFDEFNSESELYKFVGNVVLPS 100
           HGTFKRQA  +FD+FN ESE + F G   + S
Sbjct: 304 HGTFKRQAAASFDDFNPESEQFFFDGTEAISS 335

[Close]

BLAST of PI0019307 vs. ExPASy TrEMBL
Match: A0A5A7UKN2 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00060 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.7e-20
Identity = 57/136 (41.91%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 8   IAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINI 67
           +A++    K+L+E K+KIRYNY+ F+P NI I +E+GN F IQT+  +E KWL ERN+ +
Sbjct: 179 VAEEAKASKNLIEVKLKIRYNYSGFLPTNIKIFDEKGNRFNIQTVSHSEGKWLIERNVQL 238

Query: 68  HGTFKRQATVNFDEFNSESELYKFVGNVVLPSKNFEIPNSKALKTEVTPEGNLTRAKAAY 127
           HGTFKRQAT  FDE+N +SE + F G   +   N  + ++   +  +TPE   T A  + 
Sbjct: 239 HGTFKRQATTIFDEYNPDSEQFFFDGADAISLDN--LSSNFNSRKSITPE--KTSALKSV 298

Query: 128 LTHHDKIGNTARKIKK 144
           +T  D+   +A  I +
Sbjct: 299 ITRIDRNATSATAINE 310

[Close]

BLAST of PI0019307 vs. NCBI nr
Match: TYK01568.1 (hypothetical protein E5676_scaffold451G001460 [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-21
Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 8   IAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINI 67
           + K IM  ++L+EAKI +RYNY  FIPA I I ++ G+ F++  +     KWL ER++ I
Sbjct: 17  VDKAIMNIENLLEAKINVRYNYCSFIPATIKIKDKNGHSFIVHIVTICSGKWLAERDVKI 76

Query: 68  HGTFKRQATVNFDEFNSESELYKFVGNVVLPSKNFEIPNSKALKTEVTPEGNLTRAK 125
           + +FKRQ  + FD FNSE++ + F  N+ + +  FEIP +K+L  E+T EGN T AK
Sbjct: 77  NSSFKRQVAIEFDNFNSEAKQFTFSVNLAILADEFEIPKNKSLMAELTLEGNPTHAK 133

[Close]

BLAST of PI0019307 vs. NCBI nr
Match: KAA0035431.1 (hypothetical protein E6C27_scaffold285G00510 [Cucumis melo var. makuwa] >TYK25720.1 hypothetical protein E5676_scaffold862G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-20
Identity = 48/117 (41.03%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 13  MEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINIHGTFK 72
           M   +++EAKIK+RYNY  FIP+ I I ++ G+ F++ T+     KWL ER++ IHG+F+
Sbjct: 1   MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFR 60

Query: 73  RQATVNFDEFNSESELYKFVGNVVLPSKNFEIPNSKALKTEVTPEGNLTRAKAAYLT 130
           RQ  +NF+ FN +++ + F G++ +P   F+IP ++AL TE+T E + T A   ++T
Sbjct: 61  RQVAINFNNFNPKAKQFNFTGDLAIPISEFKIPRNRALMTELTNEEDPTIAPRKFMT 117

[Close]

BLAST of PI0019307 vs. NCBI nr
Match: TYK13823.1 (hypothetical protein E5676_scaffold488G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-20
Identity = 46/95 (48.42%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 7   AIAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNIN 66
           A+AK+ MEK++L+EAKIK++YNYT F+PA+I + ++QG +FV+ T+   + +W  ERN+N
Sbjct: 162 AVAKETMEKENLIEAKIKVKYNYTGFVPASILLIDDQGENFVVYTVPPPKGRWFIERNVN 221

Query: 67  IHGTFKRQATVNFDEFNSESELYKFVGNVVLPSKN 102
            HGTFK +A  +FD  N  +E + F GN  +P KN
Sbjct: 222 FHGTFKIEAADDFDNLNPNAEKFTFAGNHAIPPKN 256

[Close]

BLAST of PI0019307 vs. NCBI nr
Match: KAA0045262.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK28688.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 108.2 bits (269), Expect = 5.9e-20
Identity = 45/92 (48.91%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 8   IAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINI 67
           +A++    K+L+EA++KIRYNY+ F+PAN+ I +++GN F++Q +  +E KWL ERN+ +
Sbjct: 244 VAEETKTAKNLIEARLKIRYNYSGFLPANVKIFDQEGNKFIVQVVTHSEGKWLMERNVKL 303

Query: 68  HGTFKRQATVNFDEFNSESELYKFVGNVVLPS 100
           HGTFKRQA  +FD+FN ESE + F G   + S
Sbjct: 304 HGTFKRQAAASFDDFNPESEQFFFDGTEAISS 335

[Close]

BLAST of PI0019307 vs. NCBI nr
Match: KAA0055618.1 (hypothetical protein E6C27_scaffold222G001040 [Cucumis melo var. makuwa] >TYK24451.1 hypothetical protein E5676_scaffold717G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 7.6e-20
Identity = 57/136 (41.91%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 8   IAKDIMEKKDLMEAKIKIRYNYTCFIPANIGITNEQGNDFVIQTICKAESKWLTERNINI 67
           +A++    K+L+E K+KIRYNY+ F+P NI I +E+GN F IQT+  +E KWL ERN+ +
Sbjct: 179 VAEEAKASKNLIEVKLKIRYNYSGFLPTNIKIFDEKGNRFNIQTVSHSEGKWLIERNVQL 238

Query: 68  HGTFKRQATVNFDEFNSESELYKFVGNVVLPSKNFEIPNSKALKTEVTPEGNLTRAKAAY 127
           HGTFKRQAT  FDE+N +SE + F G   +   N  + ++   +  +TPE   T A  + 
Sbjct: 239 HGTFKRQATTIFDEYNPDSEQFFFDGADAISLDN--LSSNFNSRKSITPE--KTSALKSV 298

Query: 128 LTHHDKIGNTARKIKK 144
           +T  D+   +A  I +
Sbjct: 299 ITRIDRNATSATAINE 310

The following BLAST results are available for this feature:

BLAST of PI0019307 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019307 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BRD1	6.7e-22	44.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DR13	9.7e-21	41.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CPN2	1.7e-20	48.42	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DZ07	2.8e-20	48.91	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7UKN2	3.7e-20	41.91	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of PI0019307 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01568.1	1.4e-21	44.44	hypothetical protein E5676_scaffold451G001460 [Cucumis melo var. makuwa]	[more]
KAA0035431.1	2.0e-20	41.03	hypothetical protein E6C27_scaffold285G00510 [Cucumis melo var. makuwa] >TYK2572...	[more]
TYK13823.1	3.4e-20	48.42	hypothetical protein E5676_scaffold488G00870 [Cucumis melo var. makuwa]	[more]
KAA0045262.1	5.9e-20	48.91	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK286...	[more]
KAA0055618.1	7.6e-20	41.91	hypothetical protein E6C27_scaffold222G001040 [Cucumis melo var. makuwa] >TYK244...	[more]

BLAST of PI0019307 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 141..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019307.1	PI0019307.1	mRNA