PI0019186 (gene) Melon (PI 482460) v1

Overview


Name	PI0019186
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr04: 11123357 .. 11124069 (-)
RNA-Seq Expression	PI0019186
Synteny	PI0019186

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTGCTTATTCCCAACTTTATTTTTGTCTACACATAACAAAAAAATTATCCATTCCCTTTTCCCAATTTATTAAAACTCCCCATTCCTTAAATTGAAACTATCCCCACAAAATATCTCCCGACCCCCATTTTCTTCCAAACACGCGGCCCATTTCCATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCTACAGCCAAAGCGGCAGCGCCACCGTGCAGTTCAGAAACAGAAGCATCAGCCCCAGATCGATCGCCGTCCTCTGCCTCCATAACCAAGATCCTTCAGATCCTACAGATTGTTCAGAAGAAAAAACGAAGAAGAAAAGCCAAGAAAGAAAAGAGATGGTTCATGGGTTTATCCAAAGATTTGAGAAGATGGGAATTCAATTGAAGGAGAAATTGAGTCCACAGAGAAAAGGGGATTGGAAGGATTTGACATTGATGAGCCTTTCATTTGCTGTTTATGTATATATATCTCAGAAGATTGTTTGTGCTTATTTTCTTTGGATGTCAATGCCTAAACCACTGTGGTAGAAGATCATGTATTTCAAAGGACCTCTCTCTGTTGTTGTTCTATAATTGGTTATGGAAATTTGTGTATGATTAAAGTTTTCTCTTTCTTACAATTTTAATGTAATTTGACTATATAGATGCAATCAAGTCGTAAAAGTTCTTTTAGTATATTCACAAGTATTCGATTTGCAAC

mRNA sequence

AAAATTTGCTTATTCCCAACTTTATTTTTGTCTACACATAACAAAAAAATTATCCATTCCCTTTTCCCAATTTATTAAAACTCCCCATTCCTTAAATTGAAACTATCCCCACAAAATATCTCCCGACCCCCATTTTCTTCCAAACACGCGGCCCATTTCCATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCTACAGCCAAAGCGGCAGCGCCACCGTGCAGTTCAGAAACAGAAGCATCAGCCCCAGATCGATCGCCGTCCTCTGCCTCCATAACCAAGATCCTTCAGATCCTACAGATTGTTCAGAAGAAAAAACGAAGAAGAAAAGCCAAGAAAGAAAAGAGATGGTTCATGGGTTTATCCAAAGATTTGAGAAGATGGGAATTCAATTGAAGGAGAAATTGAGTCCACAGAGAAAAGGGGATTGGAAGGATTTGACATTGATGAGCCTTTCATTTGCTGTTTATGTATATATATCTCAGAAGATTGTTTGTGCTTATTTTCTTTGGATGTCAATGCCTAAACCACTGTGGTAGAAGATCATGTATTTCAAAGGACCTCTCTCTGTTGTTGTTCTATAATTGGTTATGGAAATTTGTGTATGATTAAAGTTTTCTCTTTCTTACAATTTTAATGTAATTTGACTATATAGATGCAATCAAGTCGTAAAAGTTCTTTTAGTATATTCACAAGTATTCGATTTGCAAC

Coding sequence (CDS)

ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCTACAGCCAAAGCGGCAGCGCCACCGTGCAGTTCAGAAACAGAAGCATCAGCCCCAGATCGATCGCCGTCCTCTGCCTCCATAACCAAGATCCTTCAGATCCTACAGATTGTTCAGAAGAAAAAACGAAGAAGAAAAGCCAAGAAAGAAAAGAGATGGTTCATGGGTTTATCCAAAGATTTGAGAAGATGGGAATTCAATTGAAGGAGAAATTGAGTCCACAGAGAAAAGGGGATTGGAAGGATTTGACATTGATGAGCCTTTCATTTGCTGTTTATGTATATATATCTCAGAAGATTGTTTGTGCTTATTTTCTTTGGATGTCAATGCCTAAACCACTGTGGTAG

Protein sequence

MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQERKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMSMPKPLW

Homology

[Close]

BLAST of PI0019186 vs. ExPASy TrEMBL
Match: A0A5D3BX35 (Putative RNA/RNP complex-1-interacting phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1871G00020 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALSAGHRHFFYS SGSA VQFRNRSISPRSIAVLCLHNQDPSDPTDCS+EKTKKKSQE
Sbjct: 1   MAALSAGHRHFFYSLSGSAIVQFRNRSISPRSIAVLCLHNQDPSDPTDCSDEKTKKKSQE 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
           RKEMVHGF+QRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS
Sbjct: 61  RKEMVHGFVQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120

Query: 121 MPKPLW 127
           MPKPLW
Sbjct: 121 MPKPLW 126

[Close]

BLAST of PI0019186 vs. ExPASy TrEMBL
Match: A0A0A0LD14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G690300 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 121/126 (96.03%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALSAGHRHFFYSQSGSAT+ FRNRSISPRSI+VLCLHNQDPSDPTDCSEEKTKKKSQE
Sbjct: 1   MAALSAGHRHFFYSQSGSATLLFRNRSISPRSISVLCLHNQDPSDPTDCSEEKTKKKSQE 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
           RKEMVHGF+QRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWM+
Sbjct: 61  RKEMVHGFVQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMT 120

Query: 121 MPKPLW 127
           MPKPLW
Sbjct: 121 MPKPLW 126

[Close]

BLAST of PI0019186 vs. ExPASy TrEMBL
Match: A0A6J1DGN1 (uncharacterized protein LOC111020315 OS=Momordica charantia OX=3673 GN=LOC111020315 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.5e-36
Identity = 83/127 (65.35%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALSAGHRHFF  + G+A  Q R R  SP+SI +LC H+QDP      SEE +K+  + 
Sbjct: 1   MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEER 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
           +++ + GF++RFEKMG++LKEKLSPQRKGDWKD+ LMSLSFAVYVYISQKIVCAYF+WMS
Sbjct: 61  KQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVWMS 119

Query: 121 MPK-PLW 127
           MPK  LW
Sbjct: 121 MPKQQLW 119

[Close]

BLAST of PI0019186 vs. ExPASy TrEMBL
Match: A0A660KVF0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_010795 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 9.2e-23
Identity = 67/126 (53.17%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALS GH   F+ +    T Q   +S SP ++ + C        P D S  +TKK+  +
Sbjct: 1   MAALSIGHS--FHRE--PITYQQLRKSSSPTTLILSCCQRH---KPVDSSNPRTKKEKSK 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
           RK ++      FEK G  L+E LSP++KGDWKDLTLMSLSFAVYVYISQK+VCAYF WMS
Sbjct: 61  RKLLLQRSSVGFEKFGKILRENLSPKQKGDWKDLTLMSLSFAVYVYISQKLVCAYFAWMS 119

Query: 121 MPKPLW 127
           MPK LW
Sbjct: 121 MPKQLW 119

[Close]

BLAST of PI0019186 vs. ExPASy TrEMBL
Match: A0A7J9DSK9 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_013044 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22
Identity = 65/128 (50.78%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRS-ISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQ 60
           MAAL   H +F Y    S+  +   RS   PR + V   HN D S     S  KTKK+ +
Sbjct: 1   MAALCVNHPNFRYKNCCSSLQRRETRSRHRPRFLVVSSSHNNDESLERSTSSSKTKKEDK 60

Query: 61  ERKEMVHG-FIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLW 120
           E+++++ G  +   +K+GI LKEK+SPQRKGDWKD+ LMSLSFAVYVY+SQK+VCAY  W
Sbjct: 61  EKRQLLFGRVLGNVQKLGIGLKEKMSPQRKGDWKDVMLMSLSFAVYVYMSQKLVCAYCAW 120

Query: 121 MSMPKPLW 127
           MSM K  W
Sbjct: 121 MSMLKQSW 128

[Close]

BLAST of PI0019186 vs. NCBI nr
Match: KGN58582.1 (hypothetical protein Csa_001602 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62
Identity = 121/126 (96.03%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALSAGHRHFFYSQSGSAT+ FRNRSISPRSI+VLCLHNQDPSDPTDCSEEKTKKKSQE
Sbjct: 1   MAALSAGHRHFFYSQSGSATLLFRNRSISPRSISVLCLHNQDPSDPTDCSEEKTKKKSQE 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
           RKEMVHGF+QRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWM+
Sbjct: 61  RKEMVHGFVQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMT 120

Query: 121 MPKPLW 127
           MPKPLW
Sbjct: 121 MPKPLW 126

[Close]

BLAST of PI0019186 vs. NCBI nr
Match: KAA0048367.1 (putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa] >TYK04067.1 putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALSAGHRHFFYS SGSA VQFRNRSISPRSIAVLCLHNQDPSDPTDCS+EKTKKKSQE
Sbjct: 1   MAALSAGHRHFFYSLSGSAIVQFRNRSISPRSIAVLCLHNQDPSDPTDCSDEKTKKKSQE 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
           RKEMVHGF+QRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS
Sbjct: 61  RKEMVHGFVQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120

Query: 121 MPKPLW 127
           MPKPLW
Sbjct: 121 MPKPLW 126

[Close]

BLAST of PI0019186 vs. NCBI nr
Match: KAG6606884.1 (hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036590.1 hypothetical protein SDJN02_00209, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.1 bits (505), Expect = 2.2e-47
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALSAGHR+FF    GSA V FRNRSISPRSI +LCLHNQ+PSDP+D SEEK KK+ QE
Sbjct: 1   MAALSAGHRYFF----GSAAVHFRNRSISPRSIVLLCLHNQNPSDPSDPSEEKPKKE-QE 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
           +K+ + GF+QRFEKMGI+LKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYF+WMS
Sbjct: 61  KKQSIPGFVQRFEKMGIELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFVWMS 120

Query: 121 MPKPLW 127
           MPK +W
Sbjct: 121 MPKQVW 121

[Close]

BLAST of PI0019186 vs. NCBI nr
Match: KAG6581569.1 (hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018076.1 hypothetical protein SDJN02_19942, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.4 bits (459), Expect = 4.8e-42
Identity = 96/126 (76.19%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALSAGHRHFF        VQF NRSISPR I +LC HN +  DP+D SEEKT KK QE
Sbjct: 1   MAALSAGHRHFF------PAVQFGNRSISPRPIVLLCCHNHN-QDPSDSSEEKT-KKDQE 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
            K+MV GFIQR++KMG++LKEKLSPQRKGDWKD+TLMSLSFAVYVYISQKIVCAYFLWMS
Sbjct: 61  GKQMVPGFIQRYKKMGMELKEKLSPQRKGDWKDVTLMSLSFAVYVYISQKIVCAYFLWMS 118

Query: 121 MPKPLW 127
           MPK LW
Sbjct: 121 MPKQLW 118

[Close]

BLAST of PI0019186 vs. NCBI nr
Match: XP_022152649.1 (uncharacterized protein LOC111020315 [Momordica charantia])

HSP 1 Score: 161.4 bits (407), Expect = 5.1e-36
Identity = 83/127 (65.35%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 1   MAALSAGHRHFFYSQSGSATVQFRNRSISPRSIAVLCLHNQDPSDPTDCSEEKTKKKSQE 60
           MAALSAGHRHFF  + G+A  Q R R  SP+SI +LC H+QDP      SEE +K+  + 
Sbjct: 1   MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEER 60

Query: 61  RKEMVHGFIQRFEKMGIQLKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWMS 120
           +++ + GF++RFEKMG++LKEKLSPQRKGDWKD+ LMSLSFAVYVYISQKIVCAYF+WMS
Sbjct: 61  KQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVWMS 119

Query: 121 MPK-PLW 127
           MPK  LW
Sbjct: 121 MPKQQLW 119

[Close]

BLAST of PI0019186 vs. TAIR 10
Match: AT3G52070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-10
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 53  KTKKKSQERKEMVHGFIQRFEKMGIQLKEKLSPQ-RKGDWKDLTLMSLSFAVYVYISQKI 112
           + +K  +E + ++   ++R      ++ + L P+ +KGD KDL LMSLSFAVYVYISQ +
Sbjct: 38  RKQKLPEENEGVIQRTLRRMISEAGKIGKNLKPEKKKGDVKDLMLMSLSFAVYVYISQLL 97

Query: 113 VCAYFLW--MSMPKPLW 127
           VCAYF W  +S PK  W
Sbjct: 98  VCAYFSWQHLSFPKSSW 114

[Close]

BLAST of PI0019186 vs. TAIR 10
Match: AT3G52070.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 53  KTKKKSQERKEMVHGFIQRFEKMGIQLKEKLSPQ-RKGDWKDLTLMSLSFAVYVYISQKI 112
           + +K  +E + ++   ++R      ++ + L P+ +KGD KDL LMSLSFAVYVYISQ +
Sbjct: 38  RKQKLPEENEGVIQRTLRRMISEAGKIGKNLKPEKKKGDVKDLMLMSLSFAVYVYISQLL 97

Query: 113 VCAYFLW--MSMPK 124
           VCAYF W  +S PK
Sbjct: 98  VCAYFSWQHLSFPK 111

The following BLAST results are available for this feature:

BLAST of PI0019186 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019186 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BX35	1.5e-62	96.83	Putative RNA/RNP complex-1-interacting phosphatase OS=Cucumis melo var. makuwa O...	[more]
A0A0A0LD14	1.5e-62	96.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G690300 PE=4 SV=1	[more]
A0A6J1DGN1	2.5e-36	65.35	uncharacterized protein LOC111020315 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A660KVF0	9.2e-23	53.17	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_010795 PE=4 SV=1	[more]
A0A7J9DSK9	2.0e-22	50.78	Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_013044 PE=4 SV=1	[more]

BLAST of PI0019186 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58582.1	3.2e-62	96.03	hypothetical protein Csa_001602 [Cucumis sativus]	[more]
KAA0048367.1	3.2e-62	96.83	putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa] >T...	[more]
KAG6606884.1	2.2e-47	80.16	hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6581569.1	4.8e-42	76.19	hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022152649.1	5.1e-36	65.35	uncharacterized protein LOC111020315 [Momordica charantia]	[more]

BLAST of PI0019186 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52070.1	3.9e-10	45.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G52070.2	2.6e-09	45.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019186.1	PI0019186.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane