PI0019060 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCACTATGCTAGCAGCGCTTCTGGAAGCAATAGCTTTGGTTCTCGGGGAGCAGGGTTGTCATTGTCACCACTTACGGCGATTGAGAATTTGGAAACACCACCTGTAAGGTCTCCACAAATTTATGGAACTCCCATGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTCGATTCATGGGGAAGCAAAGACGGTGAGGTCTCCTTTAGATTCGGGAAGTGGTGGAGGGGGGAAAAATCAATACAGATCGGACATTTGCCGCTACTGGGAGGATTCTGGTAGCTGCCGCTTTGGCAACAAATGCCAGGTTAGTTATTTTGTCCCTACCGTAATGATTTGATCTGAATTATTGGCTCTGCAAATTTATTGGCCTGTTGTTTATTACTTGAAGGACACCTTACCTCTTCCTTGAGATTTGATTGCTAATATAAGACAAATGGATAAAAAGATATTTACCATTTTAAGGAATGGTATGATTAAAGATTAGTCGTTCGTGTTCAAGTTTAATTGGTGAAATTATTTATTTATTATTTAACGTTGGTTAATTTTCCATTTATTCTTGTTCATATGGGTAGACTGAATTAATTTTTTATAGAATAGCTTGATTGAAATAATTGATGCATTCAGAGAGCGGTACCGGTACAGGATGAGTTAATGTCTCCTTGCCTAGGTTTTATGAGAAAATTCCGAGGCTGATTCAAAGATGGAATACATATCCCACTCCCAATTTTGGTTAAAATTTGGTATCAGATAATGAACTCAGTTCTAATGTGTTAATATATAGAGTGAAACAGTAGGTTGGCTGCAAAAATTGATGCACTTATGTGTTATCACAACAAGTTATTAGATTAGCAGATAAATGAACCTATACCTTTTTCAAAAGTTGGATTAATCATATACTTTGGGATGCCCGACATTCCTTTTCAGTGGTTGGATTCCAGTATCTATGGATCACCGACATCATGTGCTATTGATTTCTAATAATGGATATATTATTCAATTTCTTGGGTATATAATTCAAATTTTGGGGGACGGGGACTTGGGATTGGATCCTCCTCCTATTTAATACTTTCAAGTAATTAGATTGGCTGATTTTTTTCCAAGAATAGGACCAAAAGCTCTCTATCTGAAATGTAGTTAATTAAATATTTTGTTTAGTTACTTATCATTCACCGAAAAGTTTGGGGCCCTTTTTAATTTTTTATGTAACTGTCTTGTATTTATTATGGTGTATATACAGGAAAGAGTTTGTATTGAGAACCTCATAGCTATTTTAATACCATATAAAACTATAATTAAACTCAAAAGCTTAGAATTATTGGTTAAATTGTGATTCACACGTCACAGCATGCTACACTTTTCTAATAATATTTTCAACCATACATGTTGAAATAAATTAACGGGAAATATAAGATTAGCTAATATTACACGGTAGTTTAGTTTTTATGAATTGTATTTTCTGTTTGCAGTTTGCGCACGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGACTAAGGTACCATTGACATCTAATAAATTAAATATACTACAGGTTTTGTTCGGATAAAAGACACTTTTAGATTTGCATATTCTTCGCCACTACAGTTCAGCGAAACGTATGGTTCCAAGTTCCGCAACAATCATTCACTAACAGGAATAGCTGCAACAACCACAACGCAATCAAACTCAAACTTAGTAGATACAATCACCAAAACTGAACTAAGCAAAAGAGAAGGTCTTACTCCAACATCCTCGACTTCAAAATGGTACATGAACACTAACCCTACCCTTATTTCGACCATTTCCATCATCGATTGGTCGCCAGAAGATGATGGCATGAAAGATTGGTCGCCTGAAGATGATGGCATCAAAATTGTTGTCCCCGGAACAGAGTCGACAAAAAGAGAAGATGTAAACCAACACATCCATGAGGTTCTTTATGGTTCCACCACTGAGAGGACCAAAAAGGGACTCCCAGTTTTCATTAAACTTTGCTCTGAAGAAATACAAGAAGAATAA ATGAATCACTATGCTAGCAGCGCTTCTGGAAGCAATAGCTTTGGTTCTCGGGGAGCAGGGTTGTCATTGTCACCACTTACGGCGATTGAGAATTTGGAAACACCACCTGTAAGGTCTCCACAAATTTATGGAACTCCCATGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTCGATTCATGGGGAAGCAAAGACGGTGAGGTCTCCTTTAGATTCGGGAAGTGGTGGAGGGGGGAAAAATCAATACAGATCGGACATTTGCCGCTACTGGGAGGATTCTGGTAGCTGCCGCTTTGGCAACAAATGCCAGTTTGCGCACGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGACTAAGTTCAGCGAAACGTATGGTTCCAAGTTCCGCAACAATCATTCACTAACAGGAATAGCTGCAACAACCACAACGCAATCAAACTCAAACTTAGTAGATACAATCACCAAAACTGAACTAAGCAAAAGAGAAGGTCTTACTCCAACATCCTCGACTTCAAAATGGTACATGAACACTAACCCTACCCTTATTTCGACCATTTCCATCATCGATTGGTCGCCAGAAGATGATGGCATGAAAGATTGGTCGCCTGAAGATGATGGCATCAAAATTGTTGTCCCCGGAACAGAGTCGACAAAAAGAGAAGATGTAAACCAACACATCCATGAGGTTCTTTATGGTTCCACCACTGAGAGGACCAAAAAGGGACTCCCAGTTTTCATTAAACTTTGCTCTGAAGAAATACAAGAAGAATAA ATGAATCACTATGCTAGCAGCGCTTCTGGAAGCAATAGCTTTGGTTCTCGGGGAGCAGGGTTGTCATTGTCACCACTTACGGCGATTGAGAATTTGGAAACACCACCTGTAAGGTCTCCACAAATTTATGGAACTCCCATGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTCGATTCATGGGGAAGCAAAGACGGTGAGGTCTCCTTTAGATTCGGGAAGTGGTGGAGGGGGGAAAAATCAATACAGATCGGACATTTGCCGCTACTGGGAGGATTCTGGTAGCTGCCGCTTTGGCAACAAATGCCAGTTTGCGCACGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGACTAAGTTCAGCGAAACGTATGGTTCCAAGTTCCGCAACAATCATTCACTAACAGGAATAGCTGCAACAACCACAACGCAATCAAACTCAAACTTAGTAGATACAATCACCAAAACTGAACTAAGCAAAAGAGAAGGTCTTACTCCAACATCCTCGACTTCAAAATGGTACATGAACACTAACCCTACCCTTATTTCGACCATTTCCATCATCGATTGGTCGCCAGAAGATGATGGCATGAAAGATTGGTCGCCTGAAGATGATGGCATCAAAATTGTTGTCCCCGGAACAGAGTCGACAAAAAGAGAAGATGTAAACCAACACATCCATGAGGTTCTTTATGGTTCCACCACTGAGAGGACCAAAAAGGGACTCCCAGTTTTCATTAAACTTTGCTCTGAAGAAATACAAGAAGAATAA MNHYASSASGSNSFGSRGAGLSLSPLTAIENLETPPVRSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTELSKREGLTPTSSTSKWYMNTNPTLISTISIIDWSPEDDGMKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKGLPVFIKLCSEEIQEE Homology
BLAST of PI0019060 vs. ExPASy Swiss-Prot
Match: P23950 (mRNA decay activator protein ZFP36L1 OS=Mus musculus OX=10090 GN=Zfp36l1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06 Identity = 22/56 (39.29%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy Swiss-Prot
Match: P17431 (mRNA decay activator protein ZFP36L1 OS=Rattus norvegicus OX=10116 GN=Zfp36l1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06 Identity = 22/56 (39.29%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy Swiss-Prot
Match: P47974 (mRNA decay activator protein ZFP36L2 OS=Homo sapiens OX=9606 GN=ZFP36L2 PE=1 SV=3) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06 Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy Swiss-Prot
Match: Q07352 (mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.2e-06 Identity = 24/62 (38.71%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy Swiss-Prot
Match: Q9XV46 (CCCH-type zinc finger protein moe-3 OS=Caenorhabditis elegans OX=6239 GN=moe-3 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 7.1e-06 Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy TrEMBL
Match: A0A5D3C9H3 (Tristetraprolin-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00710 PE=4 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 4.4e-136 Identity = 250/266 (93.98%), Postives = 258/266 (96.99%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy TrEMBL
Match: A0A0A0K529 (C3H1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G103290 PE=4 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 6.4e-127 Identity = 238/265 (89.81%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy TrEMBL
Match: A0A6J1DKP7 (uncharacterized protein LOC111021811 OS=Momordica charantia OX=3673 GN=LOC111021811 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 4.4e-83 Identity = 176/273 (64.47%), Postives = 211/273 (77.29%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy TrEMBL
Match: A0A6J1ICU5 (uncharacterized protein LOC111472626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472626 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 8.0e-77 Identity = 170/270 (62.96%), Postives = 197/270 (72.96%), Query Frame = 0
BLAST of PI0019060 vs. ExPASy TrEMBL
Match: A0A6J1IEX1 (uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 8.0e-77 Identity = 170/270 (62.96%), Postives = 197/270 (72.96%), Query Frame = 0
BLAST of PI0019060 vs. NCBI nr
Match: TYK07952.1 (tristetraprolin-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 493.8 bits (1270), Expect = 9.2e-136 Identity = 250/266 (93.98%), Postives = 258/266 (96.99%), Query Frame = 0
BLAST of PI0019060 vs. NCBI nr
Match: XP_004148935.1 (uncharacterized protein LOC101215865 [Cucumis sativus] >XP_011658933.1 uncharacterized protein LOC101215865 [Cucumis sativus] >XP_031744249.1 uncharacterized protein LOC116404958 [Cucumis sativus] >XP_031744250.1 uncharacterized protein LOC116404958 [Cucumis sativus] >KAE8645918.1 hypothetical protein Csa_011889 [Cucumis sativus]) HSP 1 Score: 463.4 bits (1191), Expect = 1.3e-126 Identity = 238/265 (89.81%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of PI0019060 vs. NCBI nr
Match: XP_038897010.1 (uncharacterized protein LOC120085195 [Benincasa hispida] >XP_038897011.1 uncharacterized protein LOC120085195 [Benincasa hispida]) HSP 1 Score: 395.2 bits (1014), Expect = 4.4e-106 Identity = 211/269 (78.44%), Postives = 229/269 (85.13%), Query Frame = 0
BLAST of PI0019060 vs. NCBI nr
Match: XP_022154583.1 (uncharacterized protein LOC111021811 [Momordica charantia] >XP_022154584.1 uncharacterized protein LOC111021811 [Momordica charantia]) HSP 1 Score: 317.8 bits (813), Expect = 9.0e-83 Identity = 176/273 (64.47%), Postives = 211/273 (77.29%), Query Frame = 0
BLAST of PI0019060 vs. NCBI nr
Match: XP_023536031.1 (uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536040.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300.4 bits (768), Expect = 1.5e-77 Identity = 173/270 (64.07%), Postives = 198/270 (73.33%), Query Frame = 0
BLAST of PI0019060 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 49.3 bits (116), Expect = 5.6e-06 Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of PI0019060 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.1e-05 Identity = 22/65 (33.85%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of PI0019060 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.1e-05 Identity = 22/65 (33.85%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of PI0019060 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein ) HSP 1 Score: 42.0 bits (97), Expect = 8.9e-04 Identity = 20/44 (45.45%), Postives = 26/44 (59.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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