PI0019024 (gene) Melon (PI 482460) v1

Overview


Name	PI0019024
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	E3 ubiquitin ligase BIG BROTHER-related-like
Location	chr03: 12253596 .. 12254243 (+)
RNA-Seq Expression	PI0019024
Synteny	PI0019024

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGCAAGAGGATAATAAGCAGCAGCAGCAGCAGCAGCTTCCCCAAAGGATATCTCTTGCTTATGTTGAACAGGTGAACACAGATTTGATCATGGCCTTGGCAATGCAGCAGCAGGAGCACGAGATGGCCTATACGACGCTCGAGACCATTGAAAGTGATAGCGAAGAAGACGAAAATTCAGATTCCAACAGCAATAATGGTCTTGATACAAATACCCCCTCACAAAGGCAAGAACTTCTATCCCGGTGGGCTTTTTTGGAAGACGATGAAGAGACTACGGATGGAAATGAAGATATGGAAGAAGATGAAGATGGGGATTTTGAGGGTTTAGATCTGGATGCGCTTACTTATGAGGAGTTGATTGCATTAGGGGAGTTCATTGGGGAAGAAAAGAGGGGCCTACCGATAAACGAAATACCTTCATGCTTGCACTCGAGTAAGTTCCGAACCATTGAAAACAGAAGTGGAATAGATCGGTGTGTGATTTGCCAAGTTGAATATGATGATGGTGAAGAATTGGCTGCTCTTCCTTGTGAGCATCCTTATCATTCAGAATGTATAGGCAAATGGCTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAATGGTTCTAAAAATGAATAA

mRNA sequence

ATGGAAGAGCAAGAGGATAATAAGCAGCAGCAGCAGCAGCAGCTTCCCCAAAGGATATCTCTTGCTTATGTTGAACAGGTGAACACAGATTTGATCATGGCCTTGGCAATGCAGCAGCAGGAGCACGAGATGGCCTATACGACGCTCGAGACCATTGAAAGTGATAGCGAAGAAGACGAAAATTCAGATTCCAACAGCAATAATGGTCTTGATACAAATACCCCCTCACAAAGGCAAGAACTTCTATCCCGGTGGGCTTTTTTGGAAGACGATGAAGAGACTACGGATGGAAATGAAGATATGGAAGAAGATGAAGATGGGGATTTTGAGGGTTTAGATCTGGATGCGCTTACTTATGAGGAGTTGATTGCATTAGGGGAGTTCATTGGGGAAGAAAAGAGGGGCCTACCGATAAACGAAATACCTTCATGCTTGCACTCGAGTAAGTTCCGAACCATTGAAAACAGAAGTGGAATAGATCGGTGTGTGATTTGCCAAGTTGAATATGATGATGGTGAAGAATTGGCTGCTCTTCCTTGTGAGCATCCTTATCATTCAGAATGTATAGGCAAATGGCTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAATGGTTCTAAAAATGAATAA

Coding sequence (CDS)

ATGGAAGAGCAAGAGGATAATAAGCAGCAGCAGCAGCAGCAGCTTCCCCAAAGGATATCTCTTGCTTATGTTGAACAGGTGAACACAGATTTGATCATGGCCTTGGCAATGCAGCAGCAGGAGCACGAGATGGCCTATACGACGCTCGAGACCATTGAAAGTGATAGCGAAGAAGACGAAAATTCAGATTCCAACAGCAATAATGGTCTTGATACAAATACCCCCTCACAAAGGCAAGAACTTCTATCCCGGTGGGCTTTTTTGGAAGACGATGAAGAGACTACGGATGGAAATGAAGATATGGAAGAAGATGAAGATGGGGATTTTGAGGGTTTAGATCTGGATGCGCTTACTTATGAGGAGTTGATTGCATTAGGGGAGTTCATTGGGGAAGAAAAGAGGGGCCTACCGATAAACGAAATACCTTCATGCTTGCACTCGAGTAAGTTCCGAACCATTGAAAACAGAAGTGGAATAGATCGGTGTGTGATTTGCCAAGTTGAATATGATGATGGTGAAGAATTGGCTGCTCTTCCTTGTGAGCATCCTTATCATTCAGAATGTATAGGCAAATGGCTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAATGGTTCTAAAAATGAATAA

Protein sequence

MEEQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDENSDSNSNNGLDTNTPSQRQELLSRWAFLEDDEETTDGNEDMEEDEDGDFEGLDLDALTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEYDDGEELAALPCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKNE

Homology

[Close]

BLAST of PI0019024 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.4e-22
Identity = 79/269 (29.37%), Postives = 121/269 (44.98%), Query Frame = 0


Query: 18  RISLAYVEQVNTDLIMALAMQQQEHEMAYTTL---------------------------E 77
           R+    + Q++ DL +A  +Q+QE      T+                           E
Sbjct: 85  RVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYDEDEFDDPENE 144

Query: 78  TIESDSEEDENSDSNSNNGLDTNTPSQRQELLSRWAFLEDDEETTDGNEDME-------- 137
             + D +E E  D    +GLD N  +            EDD+E  DGN D+E        
Sbjct: 145 DEDDDEDEYETDDDPQEDGLDVNVHAN-----------EDDQE-DDGNSDIEEVAYTDDE 204

Query: 138 -------EDEDGD-----------------------------FEGLDLDALTYEELIALG 197
                  E E+ D                             ++ +D D L+YEEL+ALG
Sbjct: 205 AYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALG 264

Query: 198 EFIGEEKRGLPINEIPSCLHSSKFRTIENRSGI-DRCVICQVEYDDGEELAALPCEHPYH 215
           + +G E RGL  + I S L S +++  +N++G  + CVIC+++Y+D E+L  LPC+H YH
Sbjct: 265 DIVGTESRGLSADTIAS-LPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYH 324

[Close]

BLAST of PI0019024 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-21
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 73  NTPSQRQELLSRWAFLEDDEETTDGNEDMEEDEDGDF------EGLDLDALTYEELIALG 132
           N     +  ++R   + D +E ++  E +  + D D       + +D D +TYEEL+ LG
Sbjct: 100 NVADDPENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELG 159

Query: 133 EFIGEEKRGLPINEIPSCLHSSKFR---TIENRSGIDRCVICQVEYDDGEELAALPCEHP 192
           E +G E RGL   E+   L + K++       +   +RCVICQ++Y  GE    LPC+H 
Sbjct: 160 EAVGTESRGLS-QELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHV 219

Query: 193 YHSECIGKWLQIKRVCPICGTEV 207
           YHSECI KWL I +VCP+C +EV
Sbjct: 220 YHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of PI0019024 vs. ExPASy Swiss-Prot
Match: Q9ZQF9 (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.0e-18
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 112 LDLDALTYEELIALGEFIGEEKRGLPINEIPSCLH-----SSKFRTIENRSGIDRCVICQ 171
           LD+D ++YEEL+ALGE IG+   GL    I   +      SS   ++E    I+ C ICQ
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQ 660

Query: 172 VEYDDGEELAALPCEHPYHSECIGKWLQIKRVCPICGTE 206
            EY +G+ L  L C H +H +CI +W+ IK +CPIC TE
Sbjct: 661 EEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

[Close]

BLAST of PI0019024 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 9.5e-17
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 112 LDLDALTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDR--CVICQVEY 171
           LD+D ++YEEL+AL E IG    GL   E+   L   KF +    + ++   C ICQ EY
Sbjct: 568 LDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEASVEEEPCCICQEEY 627

Query: 172 DDGEELAALPCEHPYHSECIGKWLQIKRVCPIC 203
            DG++L  L C H +H  C+ +WL +K  CPIC
Sbjct: 628 VDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]

BLAST of PI0019024 vs. ExPASy Swiss-Prot
Match: Q9FMM4 (Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana OX=3702 GN=RHG1A PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-16
Identity = 38/94 (40.43%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 112 LDLDALTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFRT-IENRSGIDRCVICQVEYD 171
           LD+D ++YEEL+AL E IG+   G+    I + L   K+++  ++    + C +CQ EY 
Sbjct: 586 LDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRKYKSNTKSPQDAEPCCVCQEEYT 645

Query: 172 DGEELAALPCEHPYHSECIGKWLQIKRVCPICGT 205
           +GE++  L C H +HS+CI +WL+ K +CPIC T
Sbjct: 646 EGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKT 679

[Close]

BLAST of PI0019024 vs. ExPASy TrEMBL
Match: A0A0A0KFS4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382920 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.4e-108
Identity = 205/217 (94.47%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MEEQEDNKQQQQQ--QLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEE 60
           MEEQEDNKQQQQQ  QLPQRISLAYVEQVNTDLIMALAMQQQEHE+AYTTLETI SDSEE
Sbjct: 1   MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE 60

Query: 61  DENSDSNSNNGLDTNTPSQRQELLSRWAFLEDDEETTDGNEDMEEDEDGDFEGLDLDALT 120
           DENSDSNSNNGLDTN  SQRQEL+SRWAFLEDDEETTDGN+DMEEDEDGDFEG DLD LT
Sbjct: 61  DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELT 120

Query: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEYDDGEELAAL 180
           YEELIALGEFIGEEKRGLPINEIPSCLHSSKF+TIENRSGIDRCVICQVEYDDGEELAAL
Sbjct: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL 180

Query: 181 PCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKNE 216
           PCEHPYHSECIG+WLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 181 PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 217

[Close]

BLAST of PI0019024 vs. ExPASy TrEMBL
Match: A0A1S3CT85 (E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucumis melo OX=3656 GN=LOC103504080 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.1e-98
Identity = 189/228 (82.89%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 1   MEEQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDE 60
           MEEQEDN +QQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETI S+SEEDE
Sbjct: 1   MEEQEDNNKQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIASESEEDE 60

Query: 61  NSDSNSNNGLDTNTPSQRQELLSRWAFLEDDE-------------ETTDGNEDMEEDEDG 120
           +SDSNSNNGL+TN  SQR+EL+ RWAF +++E             +  + NEDMEEDEDG
Sbjct: 61  SSDSNSNNGLNTNAASQREELICRWAFPDENEYMEGNEDGDYEGSDMDELNEDMEEDEDG 120

Query: 121 DFEGLDLDALTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQV 180
           DFEG DLD LTYEELIALGEFIGEEKRGLPINEIPSCLHSSKF+TIEN+SGIDRCVICQV
Sbjct: 121 DFEGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENKSGIDRCVICQV 180

Query: 181 EYDDGEELAALPCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKNE 216
           EYDDGEELAALPC+HPYHSECIG+WLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 181 EYDDGEELAALPCQHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 228

[Close]

BLAST of PI0019024 vs. ExPASy TrEMBL
Match: A0A5D3CF09 (E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00370 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.3e-97
Identity = 187/226 (82.74%), Postives = 202/226 (89.38%), Query Frame = 0


Query: 3   EQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDENS 62
           EQEDN +QQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETI S+SEEDE+S
Sbjct: 241 EQEDNNKQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIASESEEDESS 300

Query: 63  DSNSNNGLDTNTPSQRQELLSRWAFLEDDE-------------ETTDGNEDMEEDEDGDF 122
           DSNSNNGL+TN  SQR+EL+ RWAF +++E             +  + NEDMEEDEDGDF
Sbjct: 301 DSNSNNGLNTNAASQREELICRWAFPDENEYMEGNEDGDYEGSDMDELNEDMEEDEDGDF 360

Query: 123 EGLDLDALTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEY 182
           EG DLD LTYEELIALGEFIGEEKRGLPINEIPSCLHSSKF+TIEN+SGIDRCVICQVEY
Sbjct: 361 EGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENKSGIDRCVICQVEY 420

Query: 183 DDGEELAALPCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKNE 216
           DDGEELAALPC+HPYHSECIG+WLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 421 DDGEELAALPCQHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 466

[Close]

BLAST of PI0019024 vs. ExPASy TrEMBL
Match: A0A6J1GTM7 (E3 ubiquitin ligase BIG BROTHER-related OS=Cucurbita moschata OX=3662 GN=LOC111457005 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 8.4e-85
Identity = 174/216 (80.56%), Postives = 183/216 (84.72%), Query Frame = 0


Query: 1   MEEQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDE 60
           MEEQED      +QLPQRIS AYVEQVNTD IMALAMQQQEHE  YT LETIESDSEEDE
Sbjct: 1   MEEQED------KQLPQRISRAYVEQVNTDFIMALAMQQQEHERNYTMLETIESDSEEDE 60

Query: 61  NSDSNSNNGLD-TNTPSQRQELLSRWAFLEDD-EETTDGNEDMEEDEDGDFEGLDLDALT 120
            SDSNS+NGLD TN   Q QEL S W FL DD EETTD NE M+EDE+ D E  DLD L+
Sbjct: 61  RSDSNSSNGLDHTNDSFQSQELHSPWGFLADDEEETTDDNEYMDEDEEEDIEEFDLDELS 120

Query: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEYDDGEELAAL 180
           YEELIALGEFIGEEKRGLP+NEIPSCLHSSKF+TIEN+SGIDRCVICQVEY+D EELAAL
Sbjct: 121 YEELIALGEFIGEEKRGLPMNEIPSCLHSSKFQTIENKSGIDRCVICQVEYEDSEELAAL 180

Query: 181 PCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKN 215
           PCEHPYHSECI KWLQIKRVCPICGTEVSSP  SKN
Sbjct: 181 PCEHPYHSECISKWLQIKRVCPICGTEVSSPKPSKN 210

[Close]

BLAST of PI0019024 vs. ExPASy TrEMBL
Match: A0A6J1JR32 (E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucurbita maxima OX=3661 GN=LOC111487582 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 4.2e-84
Identity = 173/216 (80.09%), Postives = 182/216 (84.26%), Query Frame = 0


Query: 1   MEEQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDE 60
           MEEQED      +QLPQRIS AYVEQVNTD IMALAMQQQEHE  YT LETIESDSEEDE
Sbjct: 1   MEEQED------KQLPQRISRAYVEQVNTDFIMALAMQQQEHERNYTMLETIESDSEEDE 60

Query: 61  NSDSNSNNGLD-TNTPSQRQELLSRWAFLEDD-EETTDGNEDMEEDEDGDFEGLDLDALT 120
            SDSNS+NGLD TN   Q QEL S W FL DD EETTD NE M+EDE+ D E  DLD L+
Sbjct: 61  RSDSNSSNGLDHTNDSLQSQELHSPWGFLADDEEETTDDNEYMDEDEEEDIEEFDLDELS 120

Query: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEYDDGEELAAL 180
           YEELIALGEFIGEEKRGLP+NEIPSCLHSSKF+TIEN+SGIDRCVICQVEY+D EELAAL
Sbjct: 121 YEELIALGEFIGEEKRGLPMNEIPSCLHSSKFQTIENKSGIDRCVICQVEYEDSEELAAL 180

Query: 181 PCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKN 215
           PCEHPYHSECI KWLQIKRVCPICGTEVSS   SKN
Sbjct: 181 PCEHPYHSECISKWLQIKRVCPICGTEVSSSKSSKN 210

[Close]

BLAST of PI0019024 vs. NCBI nr
Match: XP_004149804.1 (E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus] >KGN47704.1 hypothetical protein Csa_018241 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 5.0e-108
Identity = 205/217 (94.47%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MEEQEDNKQQQQQ--QLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEE 60
           MEEQEDNKQQQQQ  QLPQRISLAYVEQVNTDLIMALAMQQQEHE+AYTTLETI SDSEE
Sbjct: 1   MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE 60

Query: 61  DENSDSNSNNGLDTNTPSQRQELLSRWAFLEDDEETTDGNEDMEEDEDGDFEGLDLDALT 120
           DENSDSNSNNGLDTN  SQRQEL+SRWAFLEDDEETTDGN+DMEEDEDGDFEG DLD LT
Sbjct: 61  DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELT 120

Query: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEYDDGEELAAL 180
           YEELIALGEFIGEEKRGLPINEIPSCLHSSKF+TIENRSGIDRCVICQVEYDDGEELAAL
Sbjct: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL 180

Query: 181 PCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKNE 216
           PCEHPYHSECIG+WLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 181 PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 217

[Close]

BLAST of PI0019024 vs. NCBI nr
Match: XP_038886321.1 (E3 ubiquitin ligase BIG BROTHER-related-like [Benincasa hispida] >XP_038886322.1 E3 ubiquitin ligase BIG BROTHER-related-like [Benincasa hispida] >XP_038886323.1 E3 ubiquitin ligase BIG BROTHER-related-like [Benincasa hispida])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 190/214 (88.79%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 1   MEEQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDE 60
           MEEQED     +QQLPQRISLA+VEQVN+DLIMALAMQQQEHEMAYT LETIESDS+EDE
Sbjct: 1   MEEQED-----KQQLPQRISLAHVEQVNSDLIMALAMQQQEHEMAYTMLETIESDSDEDE 60

Query: 61  NSDSNSNNGLDTNTPSQRQELLSRWAFLEDDEETTDGNEDMEEDEDGDFEGLDLDALTYE 120
           NSDSNSN+GL+TN  SQRQELLSRWAFLEDDEET D NEDMEEDEDGDFE  DLD LTYE
Sbjct: 61  NSDSNSNHGLNTNASSQRQELLSRWAFLEDDEETADENEDMEEDEDGDFEDFDLDELTYE 120

Query: 121 ELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEYDDGEELAALPC 180
           ELIALGEFIG EKRGLPINEIPSCLH SKF+TIENRSGIDRCVICQVEYD+GEELAALPC
Sbjct: 121 ELIALGEFIGTEKRGLPINEIPSCLHPSKFQTIENRSGIDRCVICQVEYDEGEELAALPC 180

Query: 181 EHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKN 215
           EHPYHSECIGKWLQIKRVCPICGTEVSSP GSKN
Sbjct: 181 EHPYHSECIGKWLQIKRVCPICGTEVSSPKGSKN 209

[Close]

BLAST of PI0019024 vs. NCBI nr
Match: XP_008466738.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 1.1e-97
Identity = 189/228 (82.89%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 1   MEEQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDE 60
           MEEQEDN +QQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETI S+SEEDE
Sbjct: 1   MEEQEDNNKQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIASESEEDE 60

Query: 61  NSDSNSNNGLDTNTPSQRQELLSRWAFLEDDE-------------ETTDGNEDMEEDEDG 120
           +SDSNSNNGL+TN  SQR+EL+ RWAF +++E             +  + NEDMEEDEDG
Sbjct: 61  SSDSNSNNGLNTNAASQREELICRWAFPDENEYMEGNEDGDYEGSDMDELNEDMEEDEDG 120

Query: 121 DFEGLDLDALTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQV 180
           DFEG DLD LTYEELIALGEFIGEEKRGLPINEIPSCLHSSKF+TIEN+SGIDRCVICQV
Sbjct: 121 DFEGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENKSGIDRCVICQV 180

Query: 181 EYDDGEELAALPCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKNE 216
           EYDDGEELAALPC+HPYHSECIG+WLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 181 EYDDGEELAALPCQHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 228

[Close]

BLAST of PI0019024 vs. NCBI nr
Match: KAA0055464.1 (E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo var. makuwa] >TYK08946.1 E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo var. makuwa])

HSP 1 Score: 364.0 bits (933), Expect = 8.9e-97
Identity = 187/226 (82.74%), Postives = 202/226 (89.38%), Query Frame = 0


Query: 3   EQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDENS 62
           EQEDN +QQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETI S+SEEDE+S
Sbjct: 241 EQEDNNKQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIASESEEDESS 300

Query: 63  DSNSNNGLDTNTPSQRQELLSRWAFLEDDE-------------ETTDGNEDMEEDEDGDF 122
           DSNSNNGL+TN  SQR+EL+ RWAF +++E             +  + NEDMEEDEDGDF
Sbjct: 301 DSNSNNGLNTNAASQREELICRWAFPDENEYMEGNEDGDYEGSDMDELNEDMEEDEDGDF 360

Query: 123 EGLDLDALTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEY 182
           EG DLD LTYEELIALGEFIGEEKRGLPINEIPSCLHSSKF+TIEN+SGIDRCVICQVEY
Sbjct: 361 EGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENKSGIDRCVICQVEY 420

Query: 183 DDGEELAALPCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKNE 216
           DDGEELAALPC+HPYHSECIG+WLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 421 DDGEELAALPCQHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 466

[Close]

BLAST of PI0019024 vs. NCBI nr
Match: XP_022954880.1 (E3 ubiquitin ligase BIG BROTHER-related [Cucurbita moschata])

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-84
Identity = 174/216 (80.56%), Postives = 183/216 (84.72%), Query Frame = 0


Query: 1   MEEQEDNKQQQQQQLPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIESDSEEDE 60
           MEEQED      +QLPQRIS AYVEQVNTD IMALAMQQQEHE  YT LETIESDSEEDE
Sbjct: 1   MEEQED------KQLPQRISRAYVEQVNTDFIMALAMQQQEHERNYTMLETIESDSEEDE 60

Query: 61  NSDSNSNNGLD-TNTPSQRQELLSRWAFLEDD-EETTDGNEDMEEDEDGDFEGLDLDALT 120
            SDSNS+NGLD TN   Q QEL S W FL DD EETTD NE M+EDE+ D E  DLD L+
Sbjct: 61  RSDSNSSNGLDHTNDSFQSQELHSPWGFLADDEEETTDDNEYMDEDEEEDIEEFDLDELS 120

Query: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEYDDGEELAAL 180
           YEELIALGEFIGEEKRGLP+NEIPSCLHSSKF+TIEN+SGIDRCVICQVEY+D EELAAL
Sbjct: 121 YEELIALGEFIGEEKRGLPMNEIPSCLHSSKFQTIENKSGIDRCVICQVEYEDSEELAAL 180

Query: 181 PCEHPYHSECIGKWLQIKRVCPICGTEVSSPNGSKN 215
           PCEHPYHSECI KWLQIKRVCPICGTEVSSP  SKN
Sbjct: 181 PCEHPYHSECISKWLQIKRVCPICGTEVSSPKPSKN 210

[Close]

BLAST of PI0019024 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.7e-33
Identity = 84/213 (39.44%), Postives = 133/213 (62.44%), Query Frame = 0


Query: 6   DNKQQQQQQLPQRI-SLAYVEQVNTDLIMALAMQQQE-----HEMAYTTLETIESDSEED 65
           DN++++ +Q P ++  LA  EQ N+++ +A +          H+ + + +  IESD E +
Sbjct: 2   DNQEEEPKQPPNKLPDLALFEQANSEVALAASQANSHFAHAMHDSSPSMISMIESDEESE 61

Query: 66  ENSDSNSN--NGLDTNTPSQRQELLSRWAFLEDDEETTDGNEDMEEDED--GDFEGLDLD 125
           +  + N N     D+N     ++ ++   FLED E     N ++EE++D   + + +D D
Sbjct: 62  DEEEINENYYEYFDSNGFGVDEDEINE--FLEDQE----SNSNLEEEDDFLEEEDEIDPD 121

Query: 126 ALTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFRTIENRSGIDRCVICQVEYDDGEEL 185
            L+YEELIALG+FIG E RGL   EI +CL++S +    N++ IDRCV+CQ+E+++ E L
Sbjct: 122 QLSYEELIALGDFIGVENRGLTPIEISTCLNASTYVFSHNKNEIDRCVVCQMEFEERESL 181

Query: 186 AAL-PCEHPYHSECIGKWLQIKRVCPICGTEVS 208
             L PC+HPYHSECI KWL+ K++CPIC +E S
Sbjct: 182 VVLRPCDHPYHSECITKWLETKKICPICCSEPS 208

[Close]

BLAST of PI0019024 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-23
Identity = 79/269 (29.37%), Postives = 121/269 (44.98%), Query Frame = 0


Query: 18  RISLAYVEQVNTDLIMALAMQQQEHEMAYTTL---------------------------E 77
           R+    + Q++ DL +A  +Q+QE      T+                           E
Sbjct: 85  RVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYDEDEFDDPENE 144

Query: 78  TIESDSEEDENSDSNSNNGLDTNTPSQRQELLSRWAFLEDDEETTDGNEDME-------- 137
             + D +E E  D    +GLD N  +            EDD+E  DGN D+E        
Sbjct: 145 DEDDDEDEYETDDDPQEDGLDVNVHAN-----------EDDQE-DDGNSDIEEVAYTDDE 204

Query: 138 -------EDEDGD-----------------------------FEGLDLDALTYEELIALG 197
                  E E+ D                             ++ +D D L+YEEL+ALG
Sbjct: 205 AYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALG 264

Query: 198 EFIGEEKRGLPINEIPSCLHSSKFRTIENRSGI-DRCVICQVEYDDGEELAALPCEHPYH 215
           + +G E RGL  + I S L S +++  +N++G  + CVIC+++Y+D E+L  LPC+H YH
Sbjct: 265 DIVGTESRGLSADTIAS-LPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYH 324

[Close]

BLAST of PI0019024 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 73  NTPSQRQELLSRWAFLEDDEETTDGNEDMEEDEDGDF------EGLDLDALTYEELIALG 132
           N     +  ++R   + D +E ++  E +  + D D       + +D D +TYEEL+ LG
Sbjct: 100 NVADDPENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELG 159

Query: 133 EFIGEEKRGLPINEIPSCLHSSKFR---TIENRSGIDRCVICQVEYDDGEELAALPCEHP 192
           E +G E RGL   E+   L + K++       +   +RCVICQ++Y  GE    LPC+H 
Sbjct: 160 EAVGTESRGLS-QELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHV 219

Query: 193 YHSECIGKWLQIKRVCPICGTEV 207
           YHSECI KWL I +VCP+C +EV
Sbjct: 220 YHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of PI0019024 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 73  NTPSQRQELLSRWAFLEDDEETTDGNEDMEEDEDGDF------EGLDLDALTYEELIALG 132
           N     +  ++R   + D +E ++  E +  + D D       + +D D +TYEEL+ LG
Sbjct: 100 NVADDPENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELG 159

Query: 133 EFIGEEKRGLPINEIPSCLHSSKFR---TIENRSGIDRCVICQVEYDDGEELAALPCEHP 192
           E +G E RGL   E+   L + K++       +   +RCVICQ++Y  GE    LPC+H 
Sbjct: 160 EAVGTESRGLS-QELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHV 219

Query: 193 YHSECIGKWLQIKRVCPICGTEV 207
           YHSECI KWL I +VCP+C +EV
Sbjct: 220 YHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of PI0019024 vs. TAIR 10
Match: AT2G15530.1 (RING/U-box superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-19
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 112 LDLDALTYEELIALGEFIGEEKRGLPINEIPSCLH-----SSKFRTIENRSGIDRCVICQ 171
           LD+D ++YEEL+ALGE IG+   GL    I   +      SS   ++E    I+ C ICQ
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQ 660

Query: 172 VEYDDGEELAALPCEHPYHSECIGKWLQIKRVCPICGTE 206
            EY +G+ L  L C H +H +CI +W+ IK +CPIC TE
Sbjct: 661 EEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

The following BLAST results are available for this feature:

BLAST of PI0019024 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT17	4.4e-22	29.37	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P...	[more]
Q8L649	3.7e-21	37.76	E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE...	[more]
Q9ZQF9	5.0e-18	43.43	E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV...	[more]
Q7XTV7	9.5e-17	41.94	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9FMM4	2.1e-16	40.43	Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of PI0019024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFS4	2.4e-108	94.47	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382920 P...	[more]
A0A1S3CT85	5.1e-98	82.89	E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A5D3CF09	4.3e-97	82.74	E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1GTM7	8.4e-85	80.56	E3 ubiquitin ligase BIG BROTHER-related OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JR32	4.2e-84	80.09	E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of PI0019024 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149804.1	5.0e-108	94.47	E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus] >KGN47704.1 hypothetic...	[more]
XP_038886321.1	1.6e-98	88.79	E3 ubiquitin ligase BIG BROTHER-related-like [Benincasa hispida] >XP_038886322.1...	[more]
XP_008466738.1	1.1e-97	82.89	PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo]	[more]
KAA0055464.1	8.9e-97	82.74	E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo var. makuwa] >TYK0894...	[more]
XP_022954880.1	1.7e-84	80.56	E3 ubiquitin ligase BIG BROTHER-related [Cucurbita moschata]	[more]

BLAST of PI0019024 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47180.1	9.7e-33	39.44	RING/U-box superfamily protein	[more]
AT3G19910.1	3.1e-23	29.37	RING/U-box superfamily protein	[more]
AT3G63530.1	2.6e-22	37.76	RING/U-box superfamily protein	[more]
AT3G63530.2	2.6e-22	37.76	RING/U-box superfamily protein	[more]
AT2G15530.1	3.6e-19	43.43	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 162..202 e-value: 1.6E-5 score: 34.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 161..202 e-value: 1.7E-11 score: 44.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 162..202 score: 11.264779
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 138..211 e-value: 1.4E-17 score: 64.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..81
None	No IPR available	PANTHER	PTHR46400:SF8	E3 UBIQUITIN LIGASE BIG BROTHER-RELATED-LIKE	coord: 4..211
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 161..209
IPR033276	E3 ubiquitin-protein ligase BIG BROTHER	PANTHER	PTHR46400	RING/U-BOX SUPERFAMILY PROTEIN	coord: 4..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019024.1	PI0019024.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046621	negative regulation of organ growth
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
molecular_function	GO:0004298	threonine-type endopeptidase activity
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity