PI0018943 (gene) Melon (PI 482460) v1

Overview


Name	PI0018943
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1
Location	chr01: 7675651 .. 7677976 (-)
RNA-Seq Expression	PI0018943
Synteny	PI0018943

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTTGTTCTTCCGCTCTTACTCAGGACCTCTCCGTCGGACCCAACAGCAACTCCACATTTTTCCGGTACACCTTCGAACATATGTAGATGGCACATTTAATTGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTCCTCCCAGTGATGAACATTAAAGATTTTATACAATCAGAGCCATCTAAGTCTGTTCCAGTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAATGCGTCCTATTGATCTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGGATTCAACCTCATGTCAAGCTGACCTCTAAAGTCCTTGAACTTGATGCTGAAGAACAGCTAACGTATCAAACTGAAACTTGTAGACAACAAGCTGCAGATCGACTTGTGAAACTCTTAATGTTATCAAAAGTTCATAAAGTACCTTTAAGTCTCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTCAAAGTATAGTTCCTGATTTTCCAGATTACTTCAAGGTTGTAGGACATCAAAATTTTGCATCTGGATCAGGTGATTTGCGGGTATTGGAATTGGTATGTTGGAACAATGAATTGGCCACTTCAGTTTTAGAGAATATGGCTGCAAAAGTAAAGACTGATGCATCTAAAGGAATGCATGTTACTTTTCCTATGAAATACTCGAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATCTCTCCCTATGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGATAAGTGGACTGTTGCGATTTTACACGAGCTTCTTCATATGCTTGTCATGAAGAAGACTGAGAAGGAAAATATATTGTATATAGGTGAGTATTTTGGTCTACGGTCGAGGTTTAAGAGAGCATTGCTCCACCATCCAGGGATATTCTACATATCAAGTAAGGCTGAAACCTACACGGTTGTCTTGAAAGACGGGTATAAAAGGGGTTCCGTGGTTGAGAGTAATCCTTTGATAAACATTAGAAACAAGTACCTTCACCTTATGAACATAGTGGAGGAAGACAGTAAAACAACAACTGAGCATATCGGTACTCGCCAACAGAAGGAAGAACAGAAAGAAGGGTCAGATGATGCATCTGGGAAACAGAATGAAGCTGAATTACTCAACTCCTCAGATGATGAAGATGAAGATGAAGATGAAGATGAAAATACTTCTAGTCGTCGTAACATGGGTGCTGACCGAAGAGACAACGTCCGTGCTGACCGGAGAGACAAAGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACAGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGAACGGAGAGACAGCGTCCCTGCTGACCGGAAAGACAATGTGCGTCAGAGACATGTTAATTTCAAAGAAAATGCTACTAGAAGCAGGGCGACATTACCAAAGAGAATGACTGCAGAAAGACCTTCTAGGGATGTTAAAAGAGAGAGGACAAGTATGAGCAAGAGACACCCAGTGAGGACGAAGGTTTAGCCTAGGTTTATCACCCTATGTGCTTTAATTACTTGGTCGAAATTAGAGATTTAATTTAACTATTTATAGAGAAAATAAGAAATTTTTGGAACATATTTTAAGAACTTGTGAAGAAAATTGCAATCTTTCATGGATTTTTCTTGTTTTGTAATTTGTGTTTCCAATGACTGTCTAACTGTGAAGAAAGTTGAGTAATCTGTGTTACTGATACTAAGTTCTCTCAGGAATCTCTTACCTATAATTTGAAACTGCATGATGCTTTTTATCTAATTATCAGGTTGATATGTCTTGA

mRNA sequence

ATGTTTTTGTTCTTCCGCTCTTACTCAGGACCTCTCCGTCGGACCCAACAGCAACTCCACATTTTTCCGGTACACCTTCGAACATATGTAGATGGCACATTTAATTGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTCCTCCCAGTGATGAACATTAAAGATTTTATACAATCAGAGCCATCTAAGTCTGTTCCAGTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAATGCGTCCTATTGATCTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGGATTCAACCTCATGTCAAGCTGACCTCTAAAGTCCTTGAACTTGATGCTGAAGAACAGCTAACGTATCAAACTGAAACTTGTAGACAACAAGCTGCAGATCGACTTGTGAAACTCTTAATGTTATCAAAAGTTCATAAAGTACCTTTAAGTCTCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTCAAAGTATAGTTCCTGATTTTCCAGATTACTTCAAGGTTGTAGGACATCAAAATTTTGCATCTGGATCAGGTGATTTGCGGGTATTGGAATTGGTATGTTGGAACAATGAATTGGCCACTTCAGTTTTAGAGAATATGGCTGCAAAAGTAAAGACTGATGCATCTAAAGGAATGCATGTTACTTTTCCTATGAAATACTCGAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATCTCTCCCTATGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGATAAGTGGACTGTTGCGATTTTACACGAGCTTCTTCATATGCTTGTCATGAAGAAGACTGAGAAGGAAAATATATTGTATATAGGTGAGTATTTTGGTCTACGGTCGAGGTTTAAGAGAGCATTGCTCCACCATCCAGGGATATTCTACATATCAAGTAAGGCTGAAACCTACACGGTTGTCTTGAAAGACGGGTATAAAAGGGGTTCCGTGGTTGAGAGTAATCCTTTGATAAACATTAGAAACAAGTACCTTCACCTTATGAACATAGTGGAGGAAGACAGTAAAACAACAACTGAGCATATCGGTACTCGCCAACAGAAGGAAGAACAGAAAGAAGGGTCAGATGATGCATCTGGGAAACAGAATGAAGCTGAATTACTCAACTCCTCAGATGATGAAGATGAAGATGAAGATGAAGATGAAAATACTTCTAGTCGTCGTAACATGGGTGCTGACCGAAGAGACAACGTCCGTGCTGACCGGAGAGACAAAGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTTGATATGTCTTGA

Coding sequence (CDS)

ATGTTTTTGTTCTTCCGCTCTTACTCAGGACCTCTCCGTCGGACCCAACAGCAACTCCACATTTTTCCGGTACACCTTCGAACATATGTAGATGGCACATTTAATTGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTCCTCCCAGTGATGAACATTAAAGATTTTATACAATCAGAGCCATCTAAGTCTGTTCCAGTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAATGCGTCCTATTGATCTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGGATTCAACCTCATGTCAAGCTGACCTCTAAAGTCCTTGAACTTGATGCTGAAGAACAGCTAACGTATCAAACTGAAACTTGTAGACAACAAGCTGCAGATCGACTTGTGAAACTCTTAATGTTATCAAAAGTTCATAAAGTACCTTTAAGTCTCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTCAAAGTATAGTTCCTGATTTTCCAGATTACTTCAAGGTTGTAGGACATCAAAATTTTGCATCTGGATCAGGTGATTTGCGGGTATTGGAATTGGTATGTTGGAACAATGAATTGGCCACTTCAGTTTTAGAGAATATGGCTGCAAAAGTAAAGACTGATGCATCTAAAGGAATGCATGTTACTTTTCCTATGAAATACTCGAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATCTCTCCCTATGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGATAAGTGGACTGTTGCGATTTTACACGAGCTTCTTCATATGCTTGTCATGAAGAAGACTGAGAAGGAAAATATATTGTATATAGGTGAGTATTTTGGTCTACGGTCGAGGTTTAAGAGAGCATTGCTCCACCATCCAGGGATATTCTACATATCAAGTAAGGCTGAAACCTACACGGTTGTCTTGAAAGACGGGTATAAAAGGGGTTCCGTGGTTGAGAGTAATCCTTTGATAAACATTAGAAACAAGTACCTTCACCTTATGAACATAGTGGAGGAAGACAGTAAAACAACAACTGAGCATATCGGTACTCGCCAACAGAAGGAAGAACAGAAAGAAGGGTCAGATGATGCATCTGGGAAACAGAATGAAGCTGAATTACTCAACTCCTCAGATGATGAAGATGAAGATGAAGATGAAGATGAAAATACTTCTAGTCGTCGTAACATGGGTGCTGACCGAAGAGACAACGTCCGTGCTGACCGGAGAGACAAAGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTCCGTGCTGACCGGAGAGACAGCGTTGATATGTCTTGA

Protein sequence

MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKYSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEHIGTRQQKEEQKEGSDDASGKQNEAELLNSSDDEDEDEDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDSVRADRRDSVDMS

Homology

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BLAST of PI0018943 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-52
Identity = 128/375 (34.13%), Postives = 204/375 (54.40%), Query Frame = 0


Query: 27  RTYVDGTFNWVRDRGLDHA--VEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRI 86
           RTYVD    W RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     +
Sbjct: 22  RTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV 81

Query: 87  PMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLV 146
             +    +RK+PSIFEEF+     + P  +LT +  ELD +E++ YQT        DRL 
Sbjct: 82  STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVYQTSA--DDLRDRLK 141

Query: 147 KLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLE 206
           KL+++SK + +PLS++  +KW LGLP DY+Q     FPD   +     F      ++ L 
Sbjct: 142 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQ-----FPD-MNLDSSFRFVDMEDGVKGLA 201

Query: 207 LVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKYSNGFEMDKKFKKWVDEWQKLPYIS 266
           +     +   SVL+  A K +        + FP+  S G  +  K + W+ E+QKLPY+S
Sbjct: 202 VDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVS 261

Query: 267 PYENASHLSPNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHH 326
           PY++ S L P+SD ++K  V  LHELL + V    E++ +L + ++FGL  +  +A   H
Sbjct: 262 PYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERH 321

Query: 327 PGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEHIGTR 386
           P IFY+S K +T T +L++ Y+  + VE++P++ +R KY+ LM   E   K+     G R
Sbjct: 322 PQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFR 381

Query: 387 QQKEEQKEGSDDASG 400
            +    K+   D  G
Sbjct: 382 DEGVVDKDLDLDFEG 387

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BLAST of PI0018943 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.1e-32
Identity = 103/372 (27.69%), Postives = 185/372 (49.73%), Query Frame = 0


Query: 37  VRDRGLDHAVEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRIPMR---PIDLIR 96
           VRD G D+ +E EK +  V+     I S+P+ ++ +S++      L +  +   P   + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 97  KYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAAD---RLVKLLMLS 156
           K+P +FE      I   P  ++    L   A +Q+ ++ E    Q  D   RL KL+M+S
Sbjct: 107 KFPHVFE------IYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMS 166

Query: 157 KVHKVPLSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLELVCWNN 216
              ++ L  +   + + GLP+D+  S++   P +F+++  +         + +E+V  + 
Sbjct: 167 NTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRD-----KYIEIVEKDP 226

Query: 217 ELATSVLENMAA---KVKTDASKGMHVTFPMKYSNGFEMDKKFKKWVDEWQKLPYISPYE 276
            L+   +E +     + K   ++ +  +F + +  GF++ K F+  V +WQ+LPY SPYE
Sbjct: 227 NLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYE 286

Query: 277 NASHLSPNSDES----DKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLH 336
           + S     S E+    +K +VA +HELL + V KK   E I +      L  + K  LL 
Sbjct: 287 DISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQ 346

Query: 337 HPGIFYISSK---AETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEH 393
           H GIFYIS++    + +TV L++GYKRG +VE N +   R +   L+ +    +K   E 
Sbjct: 347 HQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAEL 406

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BLAST of PI0018943 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.6e-30
Identity = 101/391 (25.83%), Postives = 201/391 (51.41%), Query Frame = 0


Query: 38  RDRGLDHAVEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRI--PMRPIDLIRKY 97
           ++   D  ++R+K L  V+ +++ + ++P + + +  + + R  L +    R I L+R++
Sbjct: 59  KEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRRF 118

Query: 98  PSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKV 157
           P +F+    G   ++  +   ++ L LD E +L  ++E     A  +L KLLM+S+  ++
Sbjct: 119 PGVFDVVEEGVYSLRFRLTPAAERLYLD-ELRLRNESEGL---AVAKLRKLLMMSQEKRI 178

Query: 158 PLSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLELVCWNNELATS 217
            +  +  LK DLGLP ++  ++   +P YF+VV      +       LEL  W+ ELA S
Sbjct: 179 LIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPA-------LELTHWDPELAVS 238

Query: 218 VLE--NMAAKVKTDASKGMHVTFPMKYS-----NGFEMDKKFKKWVDEWQKLPYISPYEN 277
             E     ++ +    + + +  P+K++      G ++ +   + +  ++++PYISPY +
Sbjct: 239 AAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYAD 298

Query: 278 ASHLSPNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHHPGIF 337
            SHL   SDE +K    ++HE+L + V K+T  +++ +  E F      +  ++ HP +F
Sbjct: 299 FSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMF 358

Query: 338 YISSKAETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEHIGTRQQKE 397
           Y+S K +  +V L++ YK   +VE N L+ ++ K   L+ +     +     +GT     
Sbjct: 359 YVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAA---VGT----G 418

Query: 398 EQKEGSDDASGKQNEAELLNSSDDEDEDEDE 420
           E+ EG + +   +++      SD+E +DEDE
Sbjct: 419 EEAEGMNGSLQSRDQV-----SDEEYDDEDE 426

[Close]

BLAST of PI0018943 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.6e-30
Identity = 103/386 (26.68%), Postives = 195/386 (50.52%), Query Frame = 0


Query: 43  DHAVEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRI--PMRPIDLIRKYPSIFE 102
           D+ ++R+K L  V+ +++ + S P + + +  + + R  L +    R I L++++P +FE
Sbjct: 70  DNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKRFPGVFE 129

Query: 103 EFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLI 162
               G   ++  +   ++ L LD E  L  ++E     A  +L KLLM+S+  ++ +  I
Sbjct: 130 VVEEGVYSLRFRLTPAAERLYLD-ELHLKNESEGL---AVTKLRKLLMMSQDKRILIEKI 189

Query: 163 DQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLE-- 222
             LK DLGLP ++  +I   +P YF+VV       G G    LEL  W+ ELA S  E  
Sbjct: 190 AHLKNDLGLPPEFRDTICLRYPQYFRVV---QMDRGPG----LELTHWDPELAVSAAEVA 249

Query: 223 NMAAKVKTDASKGMHVTFPMKYS-----NGFEMDKKFKKWVDEWQKLPYISPYENASHLS 282
               + + +  + + +  P+K++      G ++ +   + V +++++PYISPY + SHL 
Sbjct: 250 EEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLR 309

Query: 283 PNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHHPGIFYISSK 342
             S E +K    ++HE+L + + K+T  +++ +  E F      +  L+ HP +FY+S K
Sbjct: 310 SGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLK 369

Query: 343 AETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEHIGTRQQKEEQKEG 402
            +  +V L++ YK   +VE + L+ ++ K   L+ +              R  +      
Sbjct: 370 GDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAV-------------PRFPRRGVPAT 429

Query: 403 SDDASGKQNEAELLNSSDDEDEDEDE 420
           S++A      A++L+   D ++DEDE
Sbjct: 430 SEEADRTNGAAQMLSEGSDVEDDEDE 431

[Close]

BLAST of PI0018943 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.9e-26
Identity = 120/449 (26.73%), Postives = 209/449 (46.55%), Query Frame = 0


Query: 43  DHAVEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRIPMRP--IDLIRKYPSIFE 102
           D  V+R+K L  V+NI+  + S+P + + +  + + R  L +  R   I L+RKYP +FE
Sbjct: 85  DSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFE 144

Query: 103 EFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLV----KLLMLSKVHKVP 162
               G   ++   K+TS+       E+L       R +  D LV    KL+M+S   ++ 
Sbjct: 145 IVEEGAYSLR--FKMTSEA------ERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRIL 204

Query: 163 LSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSV 222
           L  I  LK DLGLP ++  +I   +P YF+VV      +       LEL  W+ ELA S 
Sbjct: 205 LEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPA-------LELTHWDPELAVSA 264

Query: 223 LENMAAKVKTDAS--KGMHVTFPMKYS-----NGFEMDKKFKKWVDEWQKLPYISPYENA 282
            E      +T  S  + + +  P K++      G  + K   + + +++ + YISPY++ 
Sbjct: 265 AELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 324

Query: 283 SHLSPNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHHPGIFY 342
           SHL   + E +K    ++HELL +   K+T  +++ +  E F    + +  L+ HP +FY
Sbjct: 325 SHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFY 384

Query: 343 ISSKAETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEHIGTRQQKEE 402
           +S K E  +V L++ Y+   +++ +PL  ++ K   L+++     +      G  ++ EE
Sbjct: 385 VSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRR------GGPRKDEE 444

Query: 403 QKEGSDDASGKQNEAELLNSSDDEDEDEDEDENTSSRRNMGADRRDNVRADRRDKVRADR 462
            +E   D S           +D E+E+E+ D    S  +   +  D    D  D    + 
Sbjct: 445 GREVEIDGS----------DADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEG 502

Query: 463 RDSVRADRRDSVRADRRDSVRADRRDSVR 479
            + V  +  D    +  DSV+     S R
Sbjct: 505 EEDVPPNFDDDDEDEEEDSVKIGLSPSSR 502

[Close]

BLAST of PI0018943 vs. ExPASy TrEMBL
Match: A0A5D3CKY8 (Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00040 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.5e-241
Identity = 438/489 (89.57%), Postives = 455/489 (93.05%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSYSGPL RTQQQLHI  +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRL+KLLMLS+VHKVP+S+IDQLKWDLGLPKD+VQSIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVGHQNFASGSGD+RVLELVCWNNELATSVLE MAAKVK D SK MH+TFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQ----QKEEQKEGSDDASGKQNEAELLNSSDDEDED 420
           NKYLHLMN VEEDSKTT +HI TRQ    QK+EQKEGSDDA G QNEAELLNSSDDEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDS 480
           EDEDENTSS   + AD RDNVRAD RD+VRADRRD VRADR D VRADR D VRADRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADPRDQVRADRRDHVRADRGDQVRADRGDHVRADRRDH 480

Query: 481 VRADRRDSV 486
           VRADRRD V
Sbjct: 481 VRADRRDHV 489

[Close]

BLAST of PI0018943 vs. ExPASy TrEMBL
Match: A0A5A7UN72 (Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00040 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.5e-241
Identity = 438/489 (89.57%), Postives = 455/489 (93.05%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSYSGPL RTQQQLHI  +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRL+KLLMLS+VHKVP+S+IDQLKWDLGLPKD+VQSIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVGHQNFASGSGD+RVLELVCWNNELATSVLE MAAKVK D SK MH+TFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQ----QKEEQKEGSDDASGKQNEAELLNSSDDEDED 420
           NKYLHLMN VEEDSKTT +HI TRQ    QK+EQKEGSDDA G QNEAELLNSSDDEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDS 480
           EDEDENTSS   + AD RDNVRAD RD+VRADRRD VRADR D VRADR D VRADRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADPRDQVRADRRDHVRADRGDQVRADRGDHVRADRRDH 480

Query: 481 VRADRRDSV 486
           VRADRRD V
Sbjct: 481 VRADRRDHV 489

[Close]

BLAST of PI0018943 vs. ExPASy TrEMBL
Match: A0A1S4DXA3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489660 PE=4 SV=1)

HSP 1 Score: 840.9 bits (2171), Expect = 2.7e-240
Identity = 438/489 (89.57%), Postives = 454/489 (92.84%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSYSGPL RTQQQLHI  +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRL+KLLMLS+VHKVP+S+IDQLKWDLGLPKD+VQSIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVG QNFASGSGD+RVLELVCWNNELATSVLE MAAKVK D SK M +TFPMKY
Sbjct: 181 FPDYFKVVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQ----QKEEQKEGSDDASGKQNEAELLNSSDDEDED 420
           NKYLHLMN VEEDSKTTT+HI TRQ    QK+EQKEGSDDA G QNEAELLNSSDDEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDS 480
           EDEDENTSS   + AD RDNVRAD RD VRADRRD V ADRRD VRADRRD VRADRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADLRDNVRADRRDHVCADRRDHVRADRRDHVRADRRDQ 480

Query: 481 VRADRRDSV 486
           VRADRRD V
Sbjct: 481 VRADRRDQV 489

[Close]

BLAST of PI0018943 vs. ExPASy TrEMBL
Match: A0A1S4DWI5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489660 PE=4 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 1.8e-239
Identity = 437/489 (89.37%), Postives = 453/489 (92.64%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSYSGPL RTQQQLHI  +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRL+KLLMLS+VHKVP+S+IDQLKWDLGLPKD+VQSIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVG QNFASGSGD+RVLELVCWNNELATSVLE MAAKVK D SK M +TFPMKY
Sbjct: 181 FPDYFKVVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQ----QKEEQKEGSDDASGKQNEAELLNSSDDEDED 420
           NKYLHLMN VEEDSKTTT+HI TRQ    QK+EQKEGSDDA G QNEAELLNSSDDEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDS 480
           EDEDENTSS   + AD RDNVRAD RD VRADRRD V ADR D VRADRRD VRADRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADLRDNVRADRRDHVCADRGDQVRADRRDHVRADRRDH 480

Query: 481 VRADRRDSV 486
           VRADRRD V
Sbjct: 481 VRADRRDQV 489

[Close]

BLAST of PI0018943 vs. ExPASy TrEMBL
Match: A0A0A0KRP2 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420350 PE=4 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 9.7e-238
Identity = 428/488 (87.70%), Postives = 453/488 (92.83%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPLRRTQ QLHIF +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRLVKLLMLS+VHKVP+S+IDQLKWDLGLPKDYV+SIVPD
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVGHQNFASGSGD+RVLELVCWNNELATSV+E MA KVK D SKGM++TFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQQKEEQKEGSDDASGKQNEAELLNSSDDEDEDEDED 420
           NKYLHLMN VEEDSKTTT+HI TRQQK+EQKE S+ A G+QNEAELLNSSD    DEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSD----DEDED 420

Query: 421 ENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDSVRAD 480
           ENTSS RN+ AD+RDN+R DRR  VR DRR +VR DRRD+VR +RRD+VR +RRD VRAD
Sbjct: 421 ENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGERRDNVRGERRDHVRAD 480

Query: 481 RRDSVDMS 489
           RRD V MS
Sbjct: 481 RRDHVKMS 484

[Close]

BLAST of PI0018943 vs. NCBI nr
Match: TYK12080.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 843.2 bits (2177), Expect = 1.1e-240
Identity = 438/489 (89.57%), Postives = 455/489 (93.05%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSYSGPL RTQQQLHI  +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRL+KLLMLS+VHKVP+S+IDQLKWDLGLPKD+VQSIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVGHQNFASGSGD+RVLELVCWNNELATSVLE MAAKVK D SK MH+TFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQ----QKEEQKEGSDDASGKQNEAELLNSSDDEDED 420
           NKYLHLMN VEEDSKTT +HI TRQ    QK+EQKEGSDDA G QNEAELLNSSDDEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDS 480
           EDEDENTSS   + AD RDNVRAD RD+VRADRRD VRADR D VRADR D VRADRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADPRDQVRADRRDHVRADRGDQVRADRGDHVRADRRDH 480

Query: 481 VRADRRDSV 486
           VRADRRD V
Sbjct: 481 VRADRRDHV 489

[Close]

BLAST of PI0018943 vs. NCBI nr
Match: KAA0056510.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 843.2 bits (2177), Expect = 1.1e-240
Identity = 438/489 (89.57%), Postives = 455/489 (93.05%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSYSGPL RTQQQLHI  +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRL+KLLMLS+VHKVP+S+IDQLKWDLGLPKD+VQSIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVGHQNFASGSGD+RVLELVCWNNELATSVLE MAAKVK D SK MH+TFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQ----QKEEQKEGSDDASGKQNEAELLNSSDDEDED 420
           NKYLHLMN VEEDSKTT +HI TRQ    QK+EQKEGSDDA G QNEAELLNSSDDEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDS 480
           EDEDENTSS   + AD RDNVRAD RD+VRADRRD VRADR D VRADR D VRADRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADPRDQVRADRRDHVRADRGDQVRADRGDHVRADRRDH 480

Query: 481 VRADRRDSV 486
           VRADRRD V
Sbjct: 481 VRADRRDHV 489

[Close]

BLAST of PI0018943 vs. NCBI nr
Match: XP_016900350.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 840.9 bits (2171), Expect = 5.6e-240
Identity = 438/489 (89.57%), Postives = 454/489 (92.84%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSYSGPL RTQQQLHI  +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRL+KLLMLS+VHKVP+S+IDQLKWDLGLPKD+VQSIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVG QNFASGSGD+RVLELVCWNNELATSVLE MAAKVK D SK M +TFPMKY
Sbjct: 181 FPDYFKVVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQ----QKEEQKEGSDDASGKQNEAELLNSSDDEDED 420
           NKYLHLMN VEEDSKTTT+HI TRQ    QK+EQKEGSDDA G QNEAELLNSSDDEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDS 480
           EDEDENTSS   + AD RDNVRAD RD VRADRRD V ADRRD VRADRRD VRADRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADLRDNVRADRRDHVCADRRDHVRADRRDHVRADRRDQ 480

Query: 481 VRADRRDSV 486
           VRADRRD V
Sbjct: 481 VRADRRDQV 489

[Close]

BLAST of PI0018943 vs. NCBI nr
Match: XP_008447137.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo] >XP_008447138.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo] >XP_016900349.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo])

HSP 1 Score: 838.2 bits (2164), Expect = 3.7e-239
Identity = 437/489 (89.37%), Postives = 453/489 (92.64%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSYSGPL RTQQQLHI  +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRL+KLLMLS+VHKVP+S+IDQLKWDLGLPKD+VQSIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVG QNFASGSGD+RVLELVCWNNELATSVLE MAAKVK D SK M +TFPMKY
Sbjct: 181 FPDYFKVVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQ----QKEEQKEGSDDASGKQNEAELLNSSDDEDED 420
           NKYLHLMN VEEDSKTTT+HI TRQ    QK+EQKEGSDDA G QNEAELLNSSDDEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDS 480
           EDEDENTSS   + AD RDNVRAD RD VRADRRD V ADR D VRADRRD VRADRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADLRDNVRADRRDHVCADRGDQVRADRRDHVRADRRDH 480

Query: 481 VRADRRDSV 486
           VRADRRD V
Sbjct: 481 VRADRRDQV 489

[Close]

BLAST of PI0018943 vs. NCBI nr
Match: KAE8648432.1 (hypothetical protein Csa_023661 [Cucumis sativus])

HSP 1 Score: 830.9 bits (2145), Expect = 5.8e-237
Identity = 426/484 (88.02%), Postives = 451/484 (93.18%), Query Frame = 0


Query: 1   MFLFFRSYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPLRRTQ QLHIF +HLRTYVDGT NWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FI+SEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPD 180
           ELDAEEQLTYQT TCRQQAADRLVKLLMLS+VHKVP+S+IDQLKWDLGLPKDYV+SIVPD
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180

Query: 181 FPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKY 240
           FPDYFKVVGHQNFASGSGD+RVLELVCWNNELATSV+E MA KVK D SKGM++TFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLV KKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIR 360
           KENIL IGEYFGLRSRFKRALLHHPGIFYISSKA TYTVVLK+GYKRGSVVESNPL+NIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNIVEEDSKTTTEHIGTRQQKEEQKEGSDDASGKQNEAELLNSSDDEDEDEDED 420
           NKYLHLMN VEEDSKTTT+HI TRQQK+EQKE S+ A G+QNEAELLNSSD    DEDED
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSD----DEDED 420

Query: 421 ENTSSRRNMGADRRDNVRADRRDKVRADRRDSVRADRRDSVRADRRDSVRADRRDSVRAD 480
           ENTSS RN+ AD+RDN+R DRR  VR DRR +VR DRRD+VR DRRD+VR DRRD+VR D
Sbjct: 421 ENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGD 480

Query: 481 RRDS 485
           RRD+
Sbjct: 481 RRDN 480

[Close]

BLAST of PI0018943 vs. TAIR 10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 446.0 bits (1146), Expect = 3.8e-125
Identity = 237/454 (52.20%), Postives = 329/454 (72.47%), Query Frame = 0


Query: 30  VDGTFNWVRDRGLDHAVEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRIPMRPI 89
           V+ T+ +VRDRGLDHAVEREKNL P+++IKD I+SEP+KSVP+S+IT +++ LR+P+RPI
Sbjct: 25  VEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPI 84

Query: 90  DLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLVKLLML 149
           + IR +PS+F+EFLPGGIGI PH+ LT ++L  DA+EQL Y +ET +Q  ADRL+KLLM+
Sbjct: 85  EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMI 144

Query: 150 SKVHKVPLSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLELVCWN 209
           ++++K+PL ++D LKWDLGLPKDYV+++VP+FPDYF+V+        SG+   LELVCW+
Sbjct: 145 NRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVI-KSKLRGCSGE---LELVCWS 204

Query: 210 NELATSVLENMAAKV-KTDASKGMHVTFPMKYSNGFEMDKKFKKWVDEWQKLPYISPYEN 269
           NE A SVLE  A  + K + +KG  + FPMK+SNGF +DKK KKW+D+WQKLPYISPYEN
Sbjct: 205 NEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYEN 264

Query: 270 ASHLSPNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHHPGIF 329
           A HLS  SDESDKW  A+LHE++++ V KK EK+ IL++GE+ GLRSRFKR L +HPGIF
Sbjct: 265 ALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIF 324

Query: 330 YISSKAETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEHIGTRQQKE 389
           Y+SSK  T+TVVL+DGYKRG ++ESN L+  RN+Y+ LMN V++D+K     + +  +KE
Sbjct: 325 YLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKA----VSSSSKKE 384

Query: 390 EQ------------KEGSDDASGKQNEAELLNSSDDEDEDEDE-DENTSSRRNMGADRRD 449
           ++            K  +DD SG   E +      D+DED+DE D+N    R     R  
Sbjct: 385 DKGKVEGEVCDTDAKAENDDISGSDVEDDRQGDFVDDDEDDDEVDQNQDLERGR---RNS 444

Query: 450 NVRADRRDKVRADRRDSVRADR-RDSVRADRRDS 469
           + R+ RR    +  RD  ++ R + S++ +++ S
Sbjct: 445 SPRSGRRSFGNSGSRDKAQSRRSKISLKTEKKRS 467

[Close]

BLAST of PI0018943 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 290.4 bits (742), Expect = 2.6e-78
Identity = 148/365 (40.55%), Postives = 228/365 (62.47%), Query Frame = 0


Query: 27  RTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRIPM 86
           RT+V+    WV D  LD AV+REKNL  V+++KD I S PSKS+P+S ++  + ++ + +
Sbjct: 16  RTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNLHI 75

Query: 87  RPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLVKL 146
                 +KYPS+F  F P       HV+LT + L L  EE+  + +   R     RL K 
Sbjct: 76  TAAAFFQKYPSVFTTFQPSP-SHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQRLTKF 135

Query: 147 LMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLELV 206
           LML+    +PL ++D+ ++DLGLP+DY+ S++ D+P+YF+V   ++  +G   L  L + 
Sbjct: 136 LMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTL-ALTIS 195

Query: 207 CWNNELATSVLENMAAKVK-TDASKGMHVTFPMKYSNGFEMDKKFKKWVDEWQKLPYISP 266
              N L  S +E   A +  +   KG+ + + M +  G+E+ K+ K WV++WQ LPYISP
Sbjct: 196 SRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNLPYISP 255

Query: 267 YENASHLSPNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHHP 326
           YENA HL   SD+++KW VA+LHELL +LV KKTE +N++ +GEY G   RFK+AL+HHP
Sbjct: 256 YENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVHHP 315

Query: 327 GIFYISSKAETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEHIGTRQ 386
           GIFY+S K  T TVVL++ Y +  ++E +PL+ IR++Y++LM+      K    H   R 
Sbjct: 316 GIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRGKKRDYVHGVERS 375

Query: 387 QKEEQ 391
            ++++
Sbjct: 376 NRKKR 378

[Close]

BLAST of PI0018943 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 229.6 bits (584), Expect = 5.5e-60
Identity = 134/370 (36.22%), Postives = 203/370 (54.86%), Query Frame = 0


Query: 7   SYSGPLRRTQQQLHIFPVHLRTYVDGTFNWVRDRGLDHAVEREKNLLPVMNIKDFIQSEP 66
           S S  L + +++   F       V+    WV+DR LD  V REK+L  V N+   I + P
Sbjct: 10  SLSTSLCKCRERFDFFYQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASP 69

Query: 67  SKSVPVSIITQKREILRIP--MRPIDLIRKYPSIFEEFL---PGGIGIQPHVKLTSKVLE 126
              +P+  +   R  L +P  ++    IR+YP+IF E       G  + P   LT + ++
Sbjct: 70  DLRLPIFKLLPHRGQLGLPQELKLSAFIRRYPNIFVEHCYWDSAGTSV-PCFGLTRETID 129

Query: 127 LDAEEQLTYQTETCRQQAAD---RLVKLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIV 186
           L  EE      +  R    D   RL KLLML+    + L  ID L+WDLGLP DY  S++
Sbjct: 130 LYYEE-----VDVSRVNERDVLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLI 189

Query: 187 PDFPDYFKVVGHQNFASGSGDLRVLELVCWNNELATSVLENMAAKVKTDASKGMHVTFPM 246
              PD F +V        S DL  L+L+ W+  LA S ++     ++ D      + FP+
Sbjct: 190 TKHPDLFSLV------KLSSDLDGLKLIHWDEHLAVSQMQ-----LREDVGNDERMAFPV 249

Query: 247 KYSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVMKK 306
           K++ GF + +K  +W+ EWQ+LPY SPY +ASHL P +D S+K  V + HELLH+ + KK
Sbjct: 250 KFTRGFGLKRKSIEWLQEWQRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKK 309

Query: 307 TEKENILYIGEYFGLRSRFKRALLHHPGIFYISSKAETYTVVLKDGYKRGSVVESNPLIN 366
           TE++N+  + + F L  +F +    HPGIFYIS K +T TV+L++ Y R  ++E +PL+ 
Sbjct: 310 TERKNVSNLRKPFALPQKFTKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVE 362

Query: 367 IRNKYLHLMN 369
           +R K+ ++MN
Sbjct: 370 VREKFANMMN 362

[Close]

BLAST of PI0018943 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 209.5 bits (532), Expect = 5.9e-54
Identity = 130/404 (32.18%), Postives = 221/404 (54.70%), Query Frame = 0


Query: 36  WVRDRGLDHAVEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRIPMRPIDLIRKY 95
           WV+++ LDH ++ E +L     +KD I+  P+  +    +   +++L + +  +  +R+Y
Sbjct: 35  WVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPVLRFLRRY 94

Query: 96  PSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLVKLLMLSKVHKV 155
           P++F EF        P  KLT   L LD++E++ +Q+        +RL ++LM+ +   V
Sbjct: 95  PTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSH--EADTVERLCRVLMMMRSKTV 154

Query: 156 PLSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLELVCWNNELATS 215
            L  +  LK+DLGLP +Y +++V  +PD+F       F   S     L+LV W +E A S
Sbjct: 155 SLRSLHSLKFDLGLPDNYEKTLVMKYPDHF------CFVKASNGNPCLKLVKWRDEFAFS 214

Query: 216 VLE--NMAAKVKTDASKGMH-------VTFPMKYSNGFEMDKKFKKWVDEWQKLPYISPY 275
            L+  N    V  + S+          +TFPM +  G+   KK K W+DE+QKLPYISPY
Sbjct: 215 ALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPY 274

Query: 276 ENASHLSPNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHHPG 335
           ++ S++ P SD  +K  VA+LHELL + + KKT++  +  +     +  +F R    +PG
Sbjct: 275 DDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPG 334

Query: 336 IFYISSKAETYTVVLKDGYKRGSVVESNPLINIRNKYLHLM-----------NIVEEDSK 395
           IFY+S K +T TV+LK+GY+RG +V+ +PL  +R+K+ H+M            +V ++  
Sbjct: 335 IFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVSKE-- 394

Query: 396 TTTEHIGTRQQKEEQKEGSDDASGKQNEAELLNSSDDEDEDEDE 420
              E +  R + + ++EGS+       E E++  S+ E++ E E
Sbjct: 395 ---ELLLDRPEDDLEEEGSE-------EEEIVEGSELEEDSEAE 418

[Close]

BLAST of PI0018943 vs. TAIR 10
Match: AT2G39120.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 209.1 bits (531), Expect = 7.7e-54
Identity = 128/375 (34.13%), Postives = 204/375 (54.40%), Query Frame = 0


Query: 27  RTYVDGTFNWVRDRGLDHA--VEREKNLLPVMNIKDFIQSEPSKSVPVSIITQKREILRI 86
           RTYVD    W RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     +
Sbjct: 22  RTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV 81

Query: 87  PMRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTETCRQQAADRLV 146
             +    +RK+PSIFEEF+     + P  +LT +  ELD +E++ YQT        DRL 
Sbjct: 82  STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVYQTSA--DDLRDRLK 141

Query: 147 KLLMLSKVHKVPLSLIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDLRVLE 206
           KL+++SK + +PLS++  +KW LGLP DY+Q     FPD   +     F      ++ L 
Sbjct: 142 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQ-----FPD-MNLDSSFRFVDMEDGVKGLA 201

Query: 207 LVCWNNELATSVLENMAAKVKTDASKGMHVTFPMKYSNGFEMDKKFKKWVDEWQKLPYIS 266
           +     +   SVL+  A K +        + FP+  S G  +  K + W+ E+QKLPY+S
Sbjct: 202 VDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVS 261

Query: 267 PYENASHLSPNSDESDKWTVAILHELLHMLVMKKTEKENILYIGEYFGLRSRFKRALLHH 326
           PY++ S L P+SD ++K  V  LHELL + V    E++ +L + ++FGL  +  +A   H
Sbjct: 262 PYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERH 321

Query: 327 PGIFYISSKAETYTVVLKDGYKRGSVVESNPLINIRNKYLHLMNIVEEDSKTTTEHIGTR 386
           P IFY+S K +T T +L++ Y+  + VE++P++ +R KY+ LM   E   K+     G R
Sbjct: 322 PQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFR 381

Query: 387 QQKEEQKEGSDDASG 400
            +    K+   D  G
Sbjct: 382 DEGVVDKDLDLDFEG 387

The following BLAST results are available for this feature:

BLAST of PI0018943 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ6	1.1e-52	34.13	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]
Q689D6	8.1e-32	27.69	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
B6TTV8	2.6e-30	25.83	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	2.6e-30	26.68	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	3.9e-26	26.73	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]

BLAST of PI0018943 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKY8	5.5e-241	89.57	Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5A7UN72	5.5e-241	89.57	Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S4DXA3	2.7e-240	89.57	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S4DWI5	1.8e-239	89.37	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KRP2	9.7e-238	87.70	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420350 PE=4 S...	[more]

BLAST of PI0018943 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12080.1	1.1e-240	89.57	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0056510.1	1.1e-240	89.57	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016900350.1	5.6e-240	89.57	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucumis melo]	[more]
XP_008447137.1	3.7e-239	89.37	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo] >XP_008...	[more]
KAE8648432.1	5.8e-237	88.02	hypothetical protein Csa_023661 [Cucumis sativus]	[more]

BLAST of PI0018943 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71850.1	3.8e-125	52.20	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G24320.1	2.6e-78	40.55	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	5.5e-60	36.22	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	5.9e-54	32.18	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G39120.1	7.7e-54	34.13	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 37..369 e-value: 4.7E-115 score: 384.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 422..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..399
None	No IPR available	PANTHER	PTHR31476:SF16	F14O23.23 PROTEIN	coord: 21..435
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 21..435

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018943.1	PI0018943.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding