PI0018942 (gene) Melon (PI 482460) v1

Overview


Name	PI0018942
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr04: 18644904 .. 18645356 (+)
RNA-Seq Expression	PI0018942
Synteny	PI0018942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAAATTATTTTCAAGAACCCCACTTCGCAAGATAAGGAAGACGAGTTGAAGAGGATCGCGTGGCCCGGGACAAAATGGGACATTACGCCAACGGGGAAGTACCAGCTCTTCGCATACAATCTGAACACTGAAACAAGTGTTTGGTACTTCTTCGTGAAGAAGAAAATAATGCCTTCGCGACACGACAGTGCAATCGCCTTGGACAAAGCGATGCTCCTCTATTGCATAATGGAGGAGTTACCCATCAATCTCAGCGAAATAATATGTCAACAATCACACGCGTTCGTGAGGCATCCACGCGGTGCAAGGCCTTTCCCCTATCTCATTGAACAACTCTGCACAAAGGTCGTGCCCGCGTTGAAGACTTTCCCCGCAATACCCATAGGATGGCTTGTGTTCTATCACAAGTCTCAATCGCATCATCAGCCTCCACAAAAACAAAGCTGA

mRNA sequence

ATGGAGCAAATTATTTTCAAGAACCCCACTTCGCAAGATAAGGAAGACGAGTTGAAGAGGATCGCGTGGCCCGGGACAAAATGGGACATTACGCCAACGGGGAAGTACCAGCTCTTCGCATACAATCTGAACACTGAAACAAGTGTTTGGTACTTCTTCGTGAAGAAGAAAATAATGCCTTCGCGACACGACAGTGCAATCGCCTTGGACAAAGCGATGCTCCTCTATTGCATAATGGAGGAGTTACCCATCAATCTCAGCGAAATAATATGTCAACAATCACACGCGTTCGTGAGGCATCCACGCGGTGCAAGGCCTTTCCCCTATCTCATTGAACAACTCTGCACAAAGGTCGTGCCCGCGTTGAAGACTTTCCCCGCAATACCCATAGGATGGCTTGTGTTCTATCACAAGTCTCAATCGCATCATCAGCCTCCACAAAAACAAAGCTGA

Coding sequence (CDS)

ATGGAGCAAATTATTTTCAAGAACCCCACTTCGCAAGATAAGGAAGACGAGTTGAAGAGGATCGCGTGGCCCGGGACAAAATGGGACATTACGCCAACGGGGAAGTACCAGCTCTTCGCATACAATCTGAACACTGAAACAAGTGTTTGGTACTTCTTCGTGAAGAAGAAAATAATGCCTTCGCGACACGACAGTGCAATCGCCTTGGACAAAGCGATGCTCCTCTATTGCATAATGGAGGAGTTACCCATCAATCTCAGCGAAATAATATGTCAACAATCACACGCGTTCGTGAGGCATCCACGCGGTGCAAGGCCTTTCCCCTATCTCATTGAACAACTCTGCACAAAGGTCGTGCCCGCGTTGAAGACTTTCCCCGCAATACCCATAGGATGGCTTGTGTTCTATCACAAGTCTCAATCGCATCATCAGCCTCCACAAAAACAAAGCTGA

Protein sequence

MEQIIFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMPSRHDSAIALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVPALKTFPAIPIGWLVFYHKSQSHHQPPQKQS

Homology

[Close]

BLAST of PI0018942 vs. ExPASy TrEMBL
Match: A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.3e-35
Identity = 71/120 (59.17%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MEQIIFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMP 60
           +E  IFKNP  +D ED LKR+AWP TKWDI PTGKYQLF  NLNTE  +W  FVK  I P
Sbjct: 25  IEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIRP 84

Query: 61  SRHDSAIALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVP 120
           +RHDS I+++  ML+YCIME L +N+ EII +   A+V+HPR  RPF +LIE+LC K  P
Sbjct: 85  TRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIAWVKHPRRTRPFSHLIEKLCLKACP 144

[Close]

BLAST of PI0018942 vs. ExPASy TrEMBL
Match: A0A5D3D2B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001360 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.3e-33
Identity = 69/126 (54.76%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 5   IFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMPSRHD 64
           IFKNP  +D E  LKR+AW GTKWDIT T +Y LF +NLN E S+W  F KKKI+P+RHD
Sbjct: 43  IFKNPQERDLEYALKRVAWSGTKWDITITRRYHLFLHNLNIEVSIWLVFEKKKIIPTRHD 102

Query: 65  SAIALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVPALKT 124
            AI++++ ML+YCIMEE+P+N+ EII +   A+V+H  GARPF YLIE+   K   AL  
Sbjct: 103 IAISMERIMLVYCIMEEIPMNIGEIISEHIIAWVKHLHGARPFSYLIEKFYLKACLALNQ 162

Query: 125 FPAIPI 131
            P + +
Sbjct: 163 LPQVEV 168

[Close]

BLAST of PI0018942 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.9e-33
Identity = 63/122 (51.64%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 7   KNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMPSRHDSA 66
           + P+  D ++ L+R+AW   KWD+T   KY+LF +NL TE SVW  F+KKK+MP+RHD+ 
Sbjct: 159 REPSDCDMQEALERVAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNT 218

Query: 67  IALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVPALKTFP 126
           I+ ++ MLLYCIMEE+P+++ EIIC    A+V+HPRGA+PFP+LIE+LC +    L+  P
Sbjct: 219 ISFERIMLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSP 278

Query: 127 AI 129
            I
Sbjct: 279 QI 280

[Close]

BLAST of PI0018942 vs. ExPASy TrEMBL
Match: A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.7e-26
Identity = 62/120 (51.67%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 4   IIFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMPSRH 63
           +IF+NP ++D +D L+ I WPGTKWD  PT KYQLF  +LNTE SVW  F+KK IMP+RH
Sbjct: 106 LIFENPKARDLQDALENIIWPGTKWDRMPTEKYQLFPNDLNTEVSVWLVFIKKNIMPTRH 165

Query: 64  DSAIALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVPALK 123
           DS I+++  MLLY   +    N  EI C+   A+V+HP GA+PF  L +QL  K  P L+
Sbjct: 166 DSTISMEIIMLLYYNGDSNQFN--EISCEHLIAWVKHPCGAKPFLCLTKQLYIKAYPELE 223

[Close]

BLAST of PI0018942 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 8.1e-26
Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1   MEQIIFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMP 60
           +E  IFK P+  D ++ L+R+AWPG KWDITP  KYQLF +NL T  SVW  F+KK +MP
Sbjct: 209 VEYPIFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPHNLKTTASVWLVFIKKNLMP 268

Query: 61  SRHDSAIALDKAMLLYCIMEELPINLSEIICQQSHAFV 99
           +RHD+ I+L++ MLLYCIMEE+P+N+ EII +   A+V
Sbjct: 269 TRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

[Close]

BLAST of PI0018942 vs. NCBI nr
Match: KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 8.8e-35
Identity = 71/120 (59.17%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MEQIIFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMP 60
           +E  IFKNP  +D ED LKR+AWP TKWDI PTGKYQLF  NLNTE  +W  FVK  I P
Sbjct: 25  IEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIRP 84

Query: 61  SRHDSAIALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVP 120
           +RHDS I+++  ML+YCIME L +N+ EII +   A+V+HPR  RPF +LIE+LC K  P
Sbjct: 85  TRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIAWVKHPRRTRPFSHLIEKLCLKACP 144

[Close]

BLAST of PI0018942 vs. NCBI nr
Match: KAA0041933.1 (hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK17865.1 hypothetical protein E5676_scaffold306G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 4.8e-33
Identity = 69/126 (54.76%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 5   IFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMPSRHD 64
           IFKNP  +D E  LKR+AW GTKWDIT T +Y LF +NLN E S+W  F KKKI+P+RHD
Sbjct: 43  IFKNPQERDLEYALKRVAWSGTKWDITITRRYHLFLHNLNIEVSIWLVFEKKKIIPTRHD 102

Query: 65  SAIALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVPALKT 124
            AI++++ ML+YCIMEE+P+N+ EII +   A+V+H  GARPF YLIE+   K   AL  
Sbjct: 103 IAISMERIMLVYCIMEEIPMNIGEIISEHIIAWVKHLHGARPFSYLIEKFYLKACLALNQ 162

Query: 125 FPAIPI 131
            P + +
Sbjct: 163 LPQVEV 168

[Close]

BLAST of PI0018942 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-32
Identity = 63/122 (51.64%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 7   KNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMPSRHDSA 66
           + P+  D ++ L+R+AW   KWD+T   KY+LF +NL TE SVW  F+KKK+MP+RHD+ 
Sbjct: 159 REPSDCDMQEALERVAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNT 218

Query: 67  IALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVPALKTFP 126
           I+ ++ MLLYCIMEE+P+++ EIIC    A+V+HPRGA+PFP+LIE+LC +    L+  P
Sbjct: 219 ISFERIMLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSP 278

Query: 127 AI 129
            I
Sbjct: 279 QI 280

[Close]

BLAST of PI0018942 vs. NCBI nr
Match: KAA0041264.1 (hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK16063.1 hypothetical protein E5676_scaffold32G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 9.8e-26
Identity = 62/120 (51.67%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 4   IIFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMPSRH 63
           +IF+NP ++D +D L+ I WPGTKWD  PT KYQLF  +LNTE SVW  F+KK IMP+RH
Sbjct: 106 LIFENPKARDLQDALENIIWPGTKWDRMPTEKYQLFPNDLNTEVSVWLVFIKKNIMPTRH 165

Query: 64  DSAIALDKAMLLYCIMEELPINLSEIICQQSHAFVRHPRGARPFPYLIEQLCTKVVPALK 123
           DS I+++  MLLY   +    N  EI C+   A+V+HP GA+PF  L +QL  K  P L+
Sbjct: 166 DSTISMEIIMLLYYNGDSNQFN--EISCEHLIAWVKHPCGAKPFLCLTKQLYIKAYPELE 223

[Close]

BLAST of PI0018942 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-25
Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1   MEQIIFKNPTSQDKEDELKRIAWPGTKWDITPTGKYQLFAYNLNTETSVWYFFVKKKIMP 60
           +E  IFK P+  D ++ L+R+AWPG KWDITP  KYQLF +NL T  SVW  F+KK +MP
Sbjct: 209 VEYPIFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPHNLKTTASVWLVFIKKNLMP 268

Query: 61  SRHDSAIALDKAMLLYCIMEELPINLSEIICQQSHAFV 99
           +RHD+ I+L++ MLLYCIMEE+P+N+ EII +   A+V
Sbjct: 269 TRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

The following BLAST results are available for this feature:

BLAST of PI0018942 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D7L3	4.3e-35	59.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D2B5	2.3e-33	54.76	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DVQ6	8.9e-33	51.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CW17	4.7e-26	51.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TZE0	8.1e-26	56.12	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]

BLAST of PI0018942 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057652.1	8.8e-35	59.17	hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19...	[more]
KAA0041933.1	4.8e-33	54.76	hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK1786...	[more]
KAA0054837.1	1.8e-32	51.64	hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777...	[more]
KAA0041264.1	9.8e-26	51.67	hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK160...	[more]
KAA0048500.1	1.7e-25	56.12	protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu...	[more]

BLAST of PI0018942 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018942.1	PI0018942.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane