PI0018697 (gene) Melon (PI 482460) v1

Overview
NamePI0018697
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 2081675 .. 2082040 (+)
RNA-Seq ExpressionPI0018697
SyntenyPI0018697
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTAAAGGCGTAGACGAATTGAATTTCTTTACCTTCCGATAAGACGCTTTCCTTTTCAGCTTCTTCGTTCTTCCAGCTGGTCCCCAATACACGCCAATCCGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATAGAACACTACACTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGCAAATGGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATAGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTCTCTGTTCAGAATGTGTTCGACAAAATGCCTCAAATTAAATAA

mRNA sequence

GTCTAAAGGCGTAGACGAATTGAATTTCTTTACCTTCCGATAAGACGCTTTCCTTTTCAGCTTCTTCGTTCTTCCAGCTGGTCCCCAATACACGCCAATCCGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATAGAACACTACACTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGCAAATGGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATAGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTCTCTGTTCAGAATGTGTTCGACAAAATGCCTCAAATTAAATAA

Coding sequence (CDS)

ATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGCAAATGGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATAGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTCTCTGTTCAGAATGTGTTCGACAAAATGCCTCAAATTAAATAA

Protein sequence

MLNADNPLTEYCPWANGAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSVQNVFDKMPQIK
Homology
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BLAST of PI0018697 vs. ExPASy TrEMBL
Match: A0A5D3D1J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003450 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-21
Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 1  MLNADNPLTEYCPWANGAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV 55
          MLNADNPLTEYCPW   AAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV
Sbjct: 25 MLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV 78

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BLAST of PI0018697 vs. NCBI nr
Match: KAA0049083.1 (hypothetical protein E6C27_scaffold171G003120 [Cucumis melo var. makuwa] >TYK17480.1 hypothetical protein E5676_scaffold434G003450 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 7.0e-21
Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 1  MLNADNPLTEYCPWANGAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV 55
          MLNADNPLTEYCPW   AAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV
Sbjct: 25 MLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV 78

The following BLAST results are available for this feature:
BLAST of PI0018697 vs.
Match NameE-valueIdentityDescription
BLAST of PI0018697 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D1J13.4e-2194.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0018697 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0049083.17.0e-2194.44hypothetical protein E6C27_scaffold171G003120 [Cucumis melo var. makuwa] >TYK174... [more]
BLAST of PI0018697 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0018697.1PI0018697.1mRNA