PI0018461 (gene) Melon (PI 482460) v1

Overview


Name	PI0018461
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NUFIP1 domain-containing protein
Location	chr09: 8714180 .. 8714811 (+)
RNA-Seq Expression	PI0018461
Synteny	PI0018461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTCTTTCCAGTTGTAGTTACCTTTGAATGTGGCATCCGATCTGATTTCTTGCAAGTTTATTGTTGAACTGTGTTCGATTCAAGATACCCGAGATAGTTTAATGTAATTTGGATACATGAATTGCAATTTGAAACCCTCCCTCTCACGAACACACTCTCTTCTTCCCTAAATCAAATTTCTTTCACGCCAAAGATATTTGAAAACTTCTTTCAAATTTTCATGCTGTGAACATGATCCTGGCCCTTCTTCACAACAGGTAATTTCCTATGAATTTGATGCATTTTTTTTTTCTCACTTTCTCCTCTCTACTCGTTTAATCTCTTCATCTTTTCAAATCCACAGTTACCCAATTCATCTCTCGCCAATTCCGGCAATGGGTTTCAAAATCAGGCCTCCTTCTGCAATCCAAACCCCCACTTGAACAATCTCCATGGAAACCCTGTTCCCACCATGCCACCTCCCATGTTTCAGCCGGGATTGATGATGAATTTGCAAAACCCTCTCATGGGGTTGCCTAATAATCCTCTTGGTGCTTTCCCTTTTGCTCCTGGGCATATGGGTTTTGCAAATTATTGTGCTAATTTTCCATCTCAGGGGCAGTTCAATTTGATGCCGAATGTGAATTAG

mRNA sequence

ATGCTTTCTTTCCAGTTATATTTGAAAACTTCTTTCAAATTTTCATGCTGTGAACATGATCCTGGCCCTTCTTCACAACAGTTACCCAATTCATCTCTCGCCAATTCCGGCAATGGGTTTCAAAATCAGGCCTCCTTCTGCAATCCAAACCCCCACTTGAACAATCTCCATGGAAACCCTGTTCCCACCATGCCACCTCCCATGTTTCAGCCGGGATTGATGATGAATTTGCAAAACCCTCTCATGGGGTTGCCTAATAATCCTCTTGGTGCTTTCCCTTTTGCTCCTGGGCATATGGGTTTTGCAAATTATTGTGCTAATTTTCCATCTCAGGGGCAGTTCAATTTGATGCCGAATGTGAATTAG

Coding sequence (CDS)

ATGCTTTCTTTCCAGTTATATTTGAAAACTTCTTTCAAATTTTCATGCTGTGAACATGATCCTGGCCCTTCTTCACAACAGTTACCCAATTCATCTCTCGCCAATTCCGGCAATGGGTTTCAAAATCAGGCCTCCTTCTGCAATCCAAACCCCCACTTGAACAATCTCCATGGAAACCCTGTTCCCACCATGCCACCTCCCATGTTTCAGCCGGGATTGATGATGAATTTGCAAAACCCTCTCATGGGGTTGCCTAATAATCCTCTTGGTGCTTTCCCTTTTGCTCCTGGGCATATGGGTTTTGCAAATTATTGTGCTAATTTTCCATCTCAGGGGCAGTTCAATTTGATGCCGAATGTGAATTAG

Protein sequence

MLSFQLYLKTSFKFSCCEHDPGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNPLMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN

Homology

[Close]

BLAST of PI0018461 vs. ExPASy TrEMBL
Match: A0A5A7SKM0 (Putative basic-leucine zipper transcription factor F isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2254G00070 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.4e-46
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNP 80
           P PSSQQ+PNSSLANSGNGFQNQA FCNPNPH NNL GNPVPTMPPPMFQPGLMMNLQNP
Sbjct: 5   PVPSSQQVPNSSLANSGNGFQNQAPFCNPNPHFNNLPGNPVPTMPPPMFQPGLMMNLQNP 64

Query: 81  LMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMGLPNNPLGA PFAPGHMGFAN  +NFP+QGQFNLMPNVN
Sbjct: 65  LMGLPNNPLGASPFAPGHMGFANSASNFPAQGQFNLMPNVN 105

[Close]

BLAST of PI0018461 vs. ExPASy TrEMBL
Match: A0A1S4E1B3 (uncharacterized protein LOC103496534 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496534 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.4e-46
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNP 80
           P PSSQQ+PNSSLANSGNGFQNQA FCNPNPH NNL GNPVPTMPPPMFQPGLMMNLQNP
Sbjct: 5   PVPSSQQVPNSSLANSGNGFQNQAPFCNPNPHFNNLPGNPVPTMPPPMFQPGLMMNLQNP 64

Query: 81  LMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMGLPNNPLGA PFAPGHMGFAN  +NFP+QGQFNLMPNVN
Sbjct: 65  LMGLPNNPLGASPFAPGHMGFANSASNFPAQGQFNLMPNVN 105

[Close]

BLAST of PI0018461 vs. ExPASy TrEMBL
Match: A0A1S3C3B2 (uncharacterized protein LOC103496534 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496534 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.4e-46
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNP 80
           P PSSQQ+PNSSLANSGNGFQNQA FCNPNPH NNL GNPVPTMPPPMFQPGLMMNLQNP
Sbjct: 5   PVPSSQQVPNSSLANSGNGFQNQAPFCNPNPHFNNLPGNPVPTMPPPMFQPGLMMNLQNP 64

Query: 81  LMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMGLPNNPLGA PFAPGHMGFAN  +NFP+QGQFNLMPNVN
Sbjct: 65  LMGLPNNPLGASPFAPGHMGFANSASNFPAQGQFNLMPNVN 105

[Close]

BLAST of PI0018461 vs. ExPASy TrEMBL
Match: A0A0A0KE87 (NUFIP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046440 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.7e-45
Identity = 90/101 (89.11%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNP 80
           P PSSQQ+PNSSL NSGNGFQNQA FCNPNP  NNLHGNPVPTMPPPMFQPGLMMNLQNP
Sbjct: 5   PRPSSQQVPNSSLVNSGNGFQNQAPFCNPNPQFNNLHGNPVPTMPPPMFQPGLMMNLQNP 64

Query: 81  LMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMGLPNN LGA PFAPGHMGFAN  ANFP+QGQFNLMPNVN
Sbjct: 65  LMGLPNNSLGASPFAPGHMGFANSAANFPAQGQFNLMPNVN 105

[Close]

BLAST of PI0018461 vs. ExPASy TrEMBL
Match: A0A6J1JY42 (uncharacterized protein LOC111488934 OS=Cucurbita maxima OX=3661 GN=LOC111488934 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.5e-41
Identity = 87/109 (79.82%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGF--------QNQASFCNPNPHLNNLHGNPVPTMPPPMFQPG 80
           P  SSQQLPNSSLANS NG         QNQA FCNPN HLNNLHGNPVP MPPPMFQPG
Sbjct: 5   PAASSQQLPNSSLANSANGLQNPIQIQHQNQALFCNPNAHLNNLHGNPVPNMPPPMFQPG 64

Query: 81  LMMNLQNPLMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMMNLQNPLM LPNNPLGA PFAPGHMGFAN  ANFP+QGQFN++PNVN
Sbjct: 65  LMMNLQNPLMALPNNPLGASPFAPGHMGFANSAANFPAQGQFNMVPNVN 113

[Close]

BLAST of PI0018461 vs. NCBI nr
Match: XP_016902016.1 (PREDICTED: uncharacterized protein LOC103496534 isoform X1 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNP 80
           P PSSQQ+PNSSLANSGNGFQNQA FCNPNPH NNL GNPVPTMPPPMFQPGLMMNLQNP
Sbjct: 5   PVPSSQQVPNSSLANSGNGFQNQAPFCNPNPHFNNLPGNPVPTMPPPMFQPGLMMNLQNP 64

Query: 81  LMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMGLPNNPLGA PFAPGHMGFAN  +NFP+QGQFNLMPNVN
Sbjct: 65  LMGLPNNPLGASPFAPGHMGFANSASNFPAQGQFNLMPNVN 105

[Close]

BLAST of PI0018461 vs. NCBI nr
Match: XP_008456637.1 (PREDICTED: uncharacterized protein LOC103496534 isoform X2 [Cucumis melo] >KAA0031714.1 putative basic-leucine zipper transcription factor F isoform X1 [Cucumis melo var. makuwa] >TYK30394.1 putative basic-leucine zipper transcription factor F isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNP 80
           P PSSQQ+PNSSLANSGNGFQNQA FCNPNPH NNL GNPVPTMPPPMFQPGLMMNLQNP
Sbjct: 5   PVPSSQQVPNSSLANSGNGFQNQAPFCNPNPHFNNLPGNPVPTMPPPMFQPGLMMNLQNP 64

Query: 81  LMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMGLPNNPLGA PFAPGHMGFAN  +NFP+QGQFNLMPNVN
Sbjct: 65  LMGLPNNPLGASPFAPGHMGFANSASNFPAQGQFNLMPNVN 105

[Close]

BLAST of PI0018461 vs. NCBI nr
Match: XP_004140922.1 (uncharacterized protein LOC101213190 [Cucumis sativus] >KGN46066.1 hypothetical protein Csa_005283 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 7.6e-45
Identity = 90/101 (89.11%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNP 80
           P PSSQQ+PNSSL NSGNGFQNQA FCNPNP  NNLHGNPVPTMPPPMFQPGLMMNLQNP
Sbjct: 5   PRPSSQQVPNSSLVNSGNGFQNQAPFCNPNPQFNNLHGNPVPTMPPPMFQPGLMMNLQNP 64

Query: 81  LMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMGLPNN LGA PFAPGHMGFAN  ANFP+QGQFNLMPNVN
Sbjct: 65  LMGLPNNSLGASPFAPGHMGFANSAANFPAQGQFNLMPNVN 105

[Close]

BLAST of PI0018461 vs. NCBI nr
Match: XP_038885674.1 (uncharacterized protein LOC120075982 [Benincasa hispida])

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44
Identity = 89/101 (88.12%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGFQNQASFCNPNPHLNNLHGNPVPTMPPPMFQPGLMMNLQNP 80
           PG SSQQLPN+SLANSGNGFQNQA FCNPNPHLNNLHGNPVP MPPPMFQPGLMMNLQNP
Sbjct: 5   PGGSSQQLPNTSLANSGNGFQNQAPFCNPNPHLNNLHGNPVPNMPPPMFQPGLMMNLQNP 64

Query: 81  LMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMGLPNNPL A PFAPGH+GFAN  AN+P+QGQFNL+PNVN
Sbjct: 65  LMGLPNNPLCASPFAPGHVGFANSAANYPAQGQFNLVPNVN 105

[Close]

BLAST of PI0018461 vs. NCBI nr
Match: KAG6578837.1 (hypothetical protein SDJN03_23285, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.6 bits (449), Expect = 6.6e-41
Identity = 87/109 (79.82%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 21  PGPSSQQLPNSSLANSGNGF--------QNQASFCNPNPHLNNLHGNPVPTMPPPMFQPG 80
           P  SSQQLPNSSLANS NG         QNQA FCNPN HLNNLHGNPVP MPPPMFQPG
Sbjct: 5   PAASSQQLPNSSLANSANGLQNPIQIQPQNQAPFCNPNAHLNNLHGNPVPNMPPPMFQPG 64

Query: 81  LMMNLQNPLMGLPNNPLGAFPFAPGHMGFANYCANFPSQGQFNLMPNVN 122
           LMMNLQNPLM LPNNPLGA PFAPGHMGFAN  ANFP+QGQFN++PNVN
Sbjct: 65  LMMNLQNPLMALPNNPLGASPFAPGHMGFANAAANFPAQGQFNMLPNVN 113

The following BLAST results are available for this feature:

BLAST of PI0018461 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SKM0	7.4e-46	90.10	Putative basic-leucine zipper transcription factor F isoform X1 OS=Cucumis melo ...	[more]
A0A1S4E1B3	7.4e-46	90.10	uncharacterized protein LOC103496534 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C3B2	7.4e-46	90.10	uncharacterized protein LOC103496534 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KE87	3.7e-45	89.11	NUFIP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046440 PE=4...	[more]
A0A6J1JY42	5.5e-41	79.82	uncharacterized protein LOC111488934 OS=Cucurbita maxima OX=3661 GN=LOC111488934...	[more]

BLAST of PI0018461 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902016.1	1.5e-45	90.10	PREDICTED: uncharacterized protein LOC103496534 isoform X1 [Cucumis melo]	[more]
XP_008456637.1	1.5e-45	90.10	PREDICTED: uncharacterized protein LOC103496534 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_004140922.1	7.6e-45	89.11	uncharacterized protein LOC101213190 [Cucumis sativus] >KGN46066.1 hypothetical ...	[more]
XP_038885674.1	1.3e-44	88.12	uncharacterized protein LOC120075982 [Benincasa hispida]	[more]
KAG6578837.1	6.6e-41	79.82	hypothetical protein SDJN03_23285, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0018461 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018461.1	PI0018461.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000492	box C/D snoRNP assembly
cellular_component	GO:0005634	nucleus