PI0018411 (gene) Melon (PI 482460) v1

Overview


Name	PI0018411
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ty3/gypsy retrotransposon protein
Location	chr12: 15465431 .. 15466050 (-)
RNA-Seq Expression	PI0018411
Synteny	PI0018411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTACATTCATTGGGAGTAACAGAGGTGGATTGGAAGAGCTTAACCATGAAGTTCAAATGTGGAGATTACAGTGTGACATTAAAGGGGGATCCTAGTTTGACTAAAGCTAGGGTAAGCTTGAAAAGTATTATGAAATCGTGGACTTCAACTGATCAAGGGTTCCTGATTGAATGTAGAGCTATGGAGGGGGAAATGACCTTTGCAGAATTCTACGGAATTGATGATATTCCAACAGTGTCTGAATCAATTCCGACATTGTTGAAGAAATTTGAAGATGTGTTTGATTGGTCAGAGGAGCTTCCACCAAGAAGGAGCATTGAACATCATATTCATCTTAAAAAAAGAGACCGATCCTATCAATGTACGTCCATATTGTTATGCATACCAGCAAAAGGAAGAAATGGAGAAGCTTGTGGTTGAGATGTTGGCATCTGGGATCATTCGTCCGAGCACAAGTCCATATTCAAGTCCTGTTCTATTGGTGAAAAAGAAAGATGGGAGTTGGAGATTTTGCGTAGATTACCAGGCATTGAATAATGTGACTATTCCGGAGAAGTTTTCCATTCCGATTATTGAAGAATTGTTTGATGAGTTGAATGGAGCTAACATGTTTTGA

mRNA sequence

ATGGTTACATTCATTGGGAGTAACAGAGGTGGATTGGAAGAGCTTAACCATGAAGTTCAAATGTGGAGATTACAGTCTATGGAGGGGGAAATGACCTTTGCAGAATTCTACGGAATTGATGATATTCCAACAGTGTCTGAATCAATTCCGACATTGTTGAAGAAATTTGAAGATGTGTTTGATTGGTCAGAGGAGCTTCCACCAAGAAGGAAGACCGATCCTATCAATGTACGTCCATATTGTTATGCATACCAGCAAAAGGAAGAAATGGAGAAGCTTGTGGTTGAGATGTTGGCATCTGGGATCATTCGTCCGAGCACAAGTCCATATTCAAGTCCTGTTCTATTGGTGAAAAAGAAAGATGGGAGTTGGAGATTTTGCGTAGATTACCAGGCATTGAATAATGTGACTATTCCGGAGAAGTTTTCCATTCCGATTATTGAAGAATTGTTTGATGAGTTGAATGGAGCTAACATGTTTTGA

Coding sequence (CDS)

ATGGTTACATTCATTGGGAGTAACAGAGGTGGATTGGAAGAGCTTAACCATGAAGTTCAAATGTGGAGATTACAGTCTATGGAGGGGGAAATGACCTTTGCAGAATTCTACGGAATTGATGATATTCCAACAGTGTCTGAATCAATTCCGACATTGTTGAAGAAATTTGAAGATGTGTTTGATTGGTCAGAGGAGCTTCCACCAAGAAGGAAGACCGATCCTATCAATGTACGTCCATATTGTTATGCATACCAGCAAAAGGAAGAAATGGAGAAGCTTGTGGTTGAGATGTTGGCATCTGGGATCATTCGTCCGAGCACAAGTCCATATTCAAGTCCTGTTCTATTGGTGAAAAAGAAAGATGGGAGTTGGAGATTTTGCGTAGATTACCAGGCATTGAATAATGTGACTATTCCGGAGAAGTTTTCCATTCCGATTATTGAAGAATTGTTTGATGAGTTGAATGGAGCTAACATGTTTTGA

Protein sequence

MVTFIGSNRGGLEELNHEVQMWRLQSMEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEELPPRRKTDPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYQALNNVTIPEKFSIPIIEELFDELNGANMF

Homology

[Close]

BLAST of PI0018411 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14
Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 77  VRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYQALNNV 136
           ++PY    + ++E+ K+V ++L +  I PS SP SSPV+LV KKDG++R CVDY+ LN  
Sbjct: 599 LQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKA 658

Query: 137 TIPEKFSIPIIEELFDELNGANMF 161
           TI + F +P I+ L   +  A +F
Sbjct: 659 TISDPFPLPRIDNLLSRIGNAQIF 682

[Close]

BLAST of PI0018411 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14
Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 77  VRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYQALNNV 136
           ++PY    + ++E+ K+V ++L +  I PS SP SSPV+LV KKDG++R CVDY+ LN  
Sbjct: 625 LQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKA 684

Query: 137 TIPEKFSIPIIEELFDELNGANMF 161
           TI + F +P I+ L   +  A +F
Sbjct: 685 TISDPFPLPRIDNLLSRIGNAQIF 708

[Close]

BLAST of PI0018411 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-13
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 73  DPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKK-----DGSWRFC 132
           DPI  + Y Y    + E+E+ + E+L  GIIRPS SPY+SP+ +V KK     +  +R  
Sbjct: 122 DPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMV 181

Query: 133 VDYQALNNVTIPEKFSIPIIEELFDELNGANMF 161
           VD++ LN VTIP+ + IP I      L  A  F
Sbjct: 182 VDFKRLNTVTIPDTYPIPDINATLASLGNAKYF 214

[Close]

BLAST of PI0018411 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.8e-11
Identity = 31/94 (32.98%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 73  DPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDG------SWRF 132
           +P+  + Y   + Q EE++  V +++   I+ PS S Y+SP+LLV KK         WR 
Sbjct: 313 EPVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRL 372

Query: 133 CVDYQALNNVTIPEKFSIPIIEELFDELNGANMF 161
            +DY+ +N   + +KF +P I+++ D+L  A  F
Sbjct: 373 VIDYRQINKKLLADKFPLPRIDDILDQLGRAKYF 406

[Close]

BLAST of PI0018411 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 80  YCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLV-KKKDGS----WRFCVDYQALN 139
           Y Y    ++E+E  + +ML  GIIR S SPY+SP+ +V KK+D S    +R  +DY+ LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 140 NVTIPEKFSIPIIEELFDELNGANMF 161
            +T+ ++  IP ++E+  +L   N F
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYF 298

[Close]

BLAST of PI0018411 vs. ExPASy TrEMBL
Match: A0A5A7VAW7 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001230 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.1e-52
Identity = 111/164 (67.68%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 7   SNRGGLEELNHEVQMWRLQSMEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEEL 66
           S++GG + ++  V    L    G MTFAE Y +D+IPTV+ESIPTLL KFE+ FDW EEL
Sbjct: 70  SHKGGCKVVSTGVP--SLNKARGGMTFAELYEVDEIPTVNESIPTLLAKFENAFDWQEEL 129

Query: 67  PPR----------RKTDPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLL 126
            PR          +  DPINVRPY YAYQQKEEMEKLV EMLA G+IR STSPYSS VLL
Sbjct: 130 LPRPSIEHHIHLKKGIDPINVRPYQYAYQQKEEMEKLVDEMLAPGVIRLSTSPYSSHVLL 189

Query: 127 VKKKDGSWRFCVDYQALNNVTIPEKFSIPIIEELFDELNGANMF 161
           VKKKDGSWRF VDY+ALNNVTIP+KF IPII+ELFDELNGA MF
Sbjct: 190 VKKKDGSWRFYVDYRALNNVTIPDKFPIPIIKELFDELNGATMF 231

[Close]

BLAST of PI0018411 vs. ExPASy TrEMBL
Match: A0A5A7UKW4 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00900 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.0e-47
Identity = 96/144 (66.67%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 27  MEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEELPPRR----------KTDPIN 86
           +EG +T A FY  +D PTV  +IP LL+KFEDVF+W + LPP+R           T+ +N
Sbjct: 790 IEGNVTVATFYEEEDEPTVDTAIPLLLRKFEDVFEWPKTLPPKRGIEHHIHLKQGTNLVN 849

Query: 87  VRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYQALNNV 146
           VR YCYA+QQ+EEME+LV EMLASGII PSTSPYSS V+LV+KKDGSW FCVDY+ALNN+
Sbjct: 850 VRSYCYAHQQQEEMERLVDEMLASGIILPSTSPYSSLVILVRKKDGSWLFCVDYRALNNI 909

Query: 147 TIPEKFSIPIIEELFDELNGANMF 161
           TIP KF IP+IEELFDELNGANMF
Sbjct: 910 TIPGKFPIPVIEELFDELNGANMF 933

[Close]

BLAST of PI0018411 vs. ExPASy TrEMBL
Match: A0A5D3CFG5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00830 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.5e-46
Identity = 95/144 (65.97%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 27  MEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEELPPRR----------KTDPIN 86
           +EG +T A FY  +D PTV  +IP LL+KFEDVF+W + LPP+R           T+ +N
Sbjct: 778 IEGNVTVATFYEEEDEPTVDTAIPLLLRKFEDVFEWPKTLPPKRGIEHHIHLKQGTNLVN 837

Query: 87  VRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYQALNNV 146
           VR YCYA+QQ+EEME+LV EMLASGII PSTSPYSS V+LV+KKDGSW FCVDY+ALNN+
Sbjct: 838 VRSYCYAHQQQEEMERLVDEMLASGIILPSTSPYSSLVILVRKKDGSWLFCVDYRALNNI 897

Query: 147 TIPEKFSIPIIEELFDELNGANMF 161
            IP KF IP+IEELFDELNGANMF
Sbjct: 898 NIPGKFPIPVIEELFDELNGANMF 921

[Close]

BLAST of PI0018411 vs. ExPASy TrEMBL
Match: A0A5A7V4D5 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005390 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.3e-45
Identity = 94/154 (61.04%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 17  HEVQMWRLQSMEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEELPPRRK----- 76
           HE     ++ +  E+  AE Y ++++PTVSESI  LL KFEDVFDW  ELPP+R      
Sbjct: 140 HEGCKVAIRELWKEVRLAELYDVEEVPTVSESISALLAKFEDVFDWLGELPPKRSIEHHI 199

Query: 77  -----TDPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRF 136
                T+ +NVRPY Y YQQ+ EMEKLV EML SG+I PS  PYSS VLLVKKK+GSWRF
Sbjct: 200 HLKKGTNTVNVRPYRYVYQQRGEMEKLVDEMLTSGVICPSNCPYSSLVLLVKKKEGSWRF 259

Query: 137 CVDYQALNNVTIPEKFSIPIIEELFDELNGANMF 161
           CVDY+ LNNV+I +KF IP+IEELFDELNGA+MF
Sbjct: 260 CVDYRTLNNVSILDKFPIPVIEELFDELNGADMF 293

[Close]

BLAST of PI0018411 vs. ExPASy TrEMBL
Match: A0A5D3C0K3 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00680 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.3e-45
Identity = 94/154 (61.04%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 17  HEVQMWRLQSMEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEELPPRRK----- 76
           HE     ++ +  E+  AE Y ++++PTVSESI  LL KFEDVFDW  ELPP+R      
Sbjct: 289 HEGCKVAIRELWKEVGLAELYDVEEVPTVSESISALLAKFEDVFDWLGELPPKRSIEHHI 348

Query: 77  -----TDPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRF 136
                T+ +NVRPY Y YQQ+ EMEKLV EML SG+I PS  PYSS VLLVKKK+GSWRF
Sbjct: 349 HLKKGTNTVNVRPYRYVYQQRGEMEKLVDEMLTSGVICPSNCPYSSLVLLVKKKEGSWRF 408

Query: 137 CVDYQALNNVTIPEKFSIPIIEELFDELNGANMF 161
           CVDY+ LNNV+I +KF IP+IEELFDELNGA+MF
Sbjct: 409 CVDYRTLNNVSILDKFPIPVIEELFDELNGADMF 442

[Close]

BLAST of PI0018411 vs. NCBI nr
Match: KAA0065442.1 (peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-51
Identity = 111/164 (67.68%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 7   SNRGGLEELNHEVQMWRLQSMEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEEL 66
           S++GG + ++  V    L    G MTFAE Y +D+IPTV+ESIPTLL KFE+ FDW EEL
Sbjct: 70  SHKGGCKVVSTGVP--SLNKARGGMTFAELYEVDEIPTVNESIPTLLAKFENAFDWQEEL 129

Query: 67  PPR----------RKTDPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLL 126
            PR          +  DPINVRPY YAYQQKEEMEKLV EMLA G+IR STSPYSS VLL
Sbjct: 130 LPRPSIEHHIHLKKGIDPINVRPYQYAYQQKEEMEKLVDEMLAPGVIRLSTSPYSSHVLL 189

Query: 127 VKKKDGSWRFCVDYQALNNVTIPEKFSIPIIEELFDELNGANMF 161
           VKKKDGSWRF VDY+ALNNVTIP+KF IPII+ELFDELNGA MF
Sbjct: 190 VKKKDGSWRFYVDYRALNNVTIPDKFPIPIIKELFDELNGATMF 231

[Close]

BLAST of PI0018411 vs. NCBI nr
Match: KAA0055708.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 8.2e-47
Identity = 96/144 (66.67%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 27  MEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEELPPRR----------KTDPIN 86
           +EG +T A FY  +D PTV  +IP LL+KFEDVF+W + LPP+R           T+ +N
Sbjct: 790 IEGNVTVATFYEEEDEPTVDTAIPLLLRKFEDVFEWPKTLPPKRGIEHHIHLKQGTNLVN 849

Query: 87  VRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYQALNNV 146
           VR YCYA+QQ+EEME+LV EMLASGII PSTSPYSS V+LV+KKDGSW FCVDY+ALNN+
Sbjct: 850 VRSYCYAHQQQEEMERLVDEMLASGIILPSTSPYSSLVILVRKKDGSWLFCVDYRALNNI 909

Query: 147 TIPEKFSIPIIEELFDELNGANMF 161
           TIP KF IP+IEELFDELNGANMF
Sbjct: 910 TIPGKFPIPVIEELFDELNGANMF 933

[Close]

BLAST of PI0018411 vs. NCBI nr
Match: TYK09954.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-46
Identity = 95/144 (65.97%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 27  MEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEELPPRR----------KTDPIN 86
           +EG +T A FY  +D PTV  +IP LL+KFEDVF+W + LPP+R           T+ +N
Sbjct: 778 IEGNVTVATFYEEEDEPTVDTAIPLLLRKFEDVFEWPKTLPPKRGIEHHIHLKQGTNLVN 837

Query: 87  VRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRFCVDYQALNNV 146
           VR YCYA+QQ+EEME+LV EMLASGII PSTSPYSS V+LV+KKDGSW FCVDY+ALNN+
Sbjct: 838 VRSYCYAHQQQEEMERLVDEMLASGIILPSTSPYSSLVILVRKKDGSWLFCVDYRALNNI 897

Query: 147 TIPEKFSIPIIEELFDELNGANMF 161
            IP KF IP+IEELFDELNGANMF
Sbjct: 898 NIPGKFPIPVIEELFDELNGANMF 921

[Close]

BLAST of PI0018411 vs. NCBI nr
Match: XP_031745972.1 (uncharacterized protein LOC116406393 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-45
Identity = 96/165 (58.18%), Postives = 116/165 (70.30%), Query Frame = 0


Query: 15  LNHEVQMWR---------LQSMEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEE 74
           L + ++ WR          ++ME      E  GI+++  V E++  +LKKFEDVF W E 
Sbjct: 547 LKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSDVLKKFEDVFTWPET 606

Query: 75  LPPRRK----------TDPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVL 134
           LPPRR           TDP+NVRPY Y YQQK EME+LV EML+SG+IRPS SPYSSPVL
Sbjct: 607 LPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVL 666

Query: 135 LVKKKDGSWRFCVDYQALNNVTIPEKFSIPIIEELFDELNGANMF 161
           LV+KKDGSWRFCVDY+ LN+VTIP+KF IP+IEELFDELNGA  F
Sbjct: 667 LVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWF 711

[Close]

BLAST of PI0018411 vs. NCBI nr
Match: KAA0062164.1 (peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44
Identity = 94/154 (61.04%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 17  HEVQMWRLQSMEGEMTFAEFYGIDDIPTVSESIPTLLKKFEDVFDWSEELPPRRK----- 76
           HE     ++ +  E+  AE Y ++++PTVSESI  LL KFEDVFDW  ELPP+R      
Sbjct: 140 HEGCKVAIRELWKEVRLAELYDVEEVPTVSESISALLAKFEDVFDWLGELPPKRSIEHHI 199

Query: 77  -----TDPINVRPYCYAYQQKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSWRF 136
                T+ +NVRPY Y YQQ+ EMEKLV EML SG+I PS  PYSS VLLVKKK+GSWRF
Sbjct: 200 HLKKGTNTVNVRPYRYVYQQRGEMEKLVDEMLTSGVICPSNCPYSSLVLLVKKKEGSWRF 259

Query: 137 CVDYQALNNVTIPEKFSIPIIEELFDELNGANMF 161
           CVDY+ LNNV+I +KF IP+IEELFDELNGA+MF
Sbjct: 260 CVDYRTLNNVSILDKFPIPVIEELFDELNGADMF 293

[Close]

BLAST of PI0018411 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 3.4e-06
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 86  QKEEMEKLVVEMLASGIIRPSTSPYSSPVLLVKKKDGSW 125
           ++  ++  + EML + II+PS SPYSSPVLLV+KKDG W
Sbjct: 41  RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of PI0018411 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	2.5e-14	42.86	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.5e-14	42.86	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	2.8e-13	40.86	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10394	5.8e-11	32.98	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
P04323	1.7e-10	38.37	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]

BLAST of PI0018411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAW7	9.1e-52	67.68	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001230 ...	[more]
A0A5A7UKW4	4.0e-47	66.67	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A5D3CFG5	1.5e-46	65.97	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V4D5	6.3e-45	61.04	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005390 ...	[more]
A0A5D3C0K3	8.3e-45	61.04	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00680 ...	[more]

BLAST of PI0018411 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065442.1	1.9e-51	67.68	peroxidase 64 [Cucumis melo var. makuwa]	[more]
KAA0055708.1	8.2e-47	66.67	protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]	[more]
TYK09954.1	3.1e-46	65.97	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_031745972.1	2.6e-45	58.18	uncharacterized protein LOC116406393 [Cucumis sativus]	[more]
KAA0062164.1	1.3e-44	61.04	peroxidase 64 [Cucumis melo var. makuwa]	[more]

BLAST of PI0018411 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00850.1	3.4e-06	56.41	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 63..158 e-value: 1.4E-32 score: 114.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 47..160
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 47..160
None	No IPR available	CDD	cd01647	RT_LTR	coord: 101..160 e-value: 2.29456E-27 score: 98.8217
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 52..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018411.1	PI0018411.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding