Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAGGTTACTATTCCAATCAAGGGGAACTATGGAAGGGGAGAACCACCACTTAAAAGACTGTCCGATACGAAATTCAGGGATAAATTGGATAAGGGTCTGTGTTTTAGATGTAATGACAAGTACTCACTAGGGCATCGCTGTAAAGTGAGAGAAAAAAGAGAAATGATGCTACTCATCTTGAACGAAGAGGAGGGAGAGATGGAGGAAGAACCCAGGGTGGAAAGAGGAGAAGGAATCGTGGAGTTGAAAAATTTGGAGGTCCTAGTGGATGCTGAGGTAGAATTGAGAACGATTATGGGATTTTCAACAAAGGGCACTATGAAGATACTAGGAAAGATTAAGGGTAGGGAGGTCATTGTGCTGATTGACAGTGGAGCCACCCACAATTTCATTCACCATAATTTGGTGGAGGAATTAAAACTACCTGTTACCCCAAGGACTACCTTTGGAGTAACAATAGGAGATGGATCTGATCGAAAAGGAAGGGGAGTTTGCAAAAGAGTGAAGTTAAACTGTCCGAGCTGACCCTGATTGCTGACTTTTTGGCAGTAGAATTGGGAAGAATAGATCTCATCCTAGGTATGTAATGGCTAGGCACAACTGGCTTCATAGACATCCACTGGCCATCACTGACCATGTTGTTCATGGTTGGGGATAAGCCTATTATTCTGAAAGGGGATCCAGCTTTAACAAGGATGGAATGTTCTTTGAAGACGATTACTAAAACATGGGAGGAAGAAGACCAAGCTTTTCTCCTTAAATTCCAGGATAGGGAGGTAGAAGGGGAACTTGAAGAAAAGTTAGAGCAGAGGAAAAAGGGGGATGAAAGGAGTTGCCCATGA
mRNA sequence
ATGAAACAGGTTACTATTCCAATCAAGGGGAACTATGGAAGGGGAGAACCACCACTTAAAAGACTGTCCGATACGAAATTCAGGGATAAATTGGATAAGGGTCTGTGTTTTAGATGTAATGACAAGTACTCACTAGGGCATCGCTGTAAAGTGAGAGAAAAAAGAGAAATGATGCTACTCATCTTGAACGAAGAGGAGGGAGAGATGGAGGAAGAACCCAGGGTGGAAAGAGGAGAAGGAATCGTGGAGTTGAAAAATTTGGAGGTCCTAGTGGATGCTGAGGTAGAATTGAGAACGATTATGGGATTTTCAACAAAGGGCACTATGAAGATACTAGGAAAGATTAAGGGTAGGGAGGTCATTGTGCTGATTGACAGTGGAGCCACCCACAATTTCATTCACCATAATTTGGTGGAGGAATTAAAACTACCTGTTACCCCAAGGACTACCTTTGGAGTAACAATAGGAGATGGATCTGATCGAAAAGGAAGGGGAGTTTGCAAAAGAGTGAAGTTAAACTGCACAACTGGCTTCATAGACATCCACTGGCCATCACTGACCATGTTGTTCATGGTTGGGGATAAGCCTATTATTCTGAAAGGGGATCCAGCTTTAACAAGGATGGAATGTTCTTTGAAGACGATTACTAAAACATGGGAGGAAGAAGACCAAGCTTTTCTCCTTAAATTCCAGGATAGGGAGGTAGAAGGGGAACTTGAAGAAAAGTTAGAGCAGAGGAAAAAGGGGGATGAAAGGAGTTGCCCATGA
Coding sequence (CDS)
ATGAAACAGGTTACTATTCCAATCAAGGGGAACTATGGAAGGGGAGAACCACCACTTAAAAGACTGTCCGATACGAAATTCAGGGATAAATTGGATAAGGGTCTGTGTTTTAGATGTAATGACAAGTACTCACTAGGGCATCGCTGTAAAGTGAGAGAAAAAAGAGAAATGATGCTACTCATCTTGAACGAAGAGGAGGGAGAGATGGAGGAAGAACCCAGGGTGGAAAGAGGAGAAGGAATCGTGGAGTTGAAAAATTTGGAGGTCCTAGTGGATGCTGAGGTAGAATTGAGAACGATTATGGGATTTTCAACAAAGGGCACTATGAAGATACTAGGAAAGATTAAGGGTAGGGAGGTCATTGTGCTGATTGACAGTGGAGCCACCCACAATTTCATTCACCATAATTTGGTGGAGGAATTAAAACTACCTGTTACCCCAAGGACTACCTTTGGAGTAACAATAGGAGATGGATCTGATCGAAAAGGAAGGGGAGTTTGCAAAAGAGTGAAGTTAAACTGCACAACTGGCTTCATAGACATCCACTGGCCATCACTGACCATGTTGTTCATGGTTGGGGATAAGCCTATTATTCTGAAAGGGGATCCAGCTTTAACAAGGATGGAATGTTCTTTGAAGACGATTACTAAAACATGGGAGGAAGAAGACCAAGCTTTTCTCCTTAAATTCCAGGATAGGGAGGTAGAAGGGGAACTTGAAGAAAAGTTAGAGCAGAGGAAAAAGGGGGATGAAAGGAGTTGCCCATGA
Protein sequence
MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLLILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREVIVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNCTTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLKTITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP
Homology
BLAST of PI0017657 vs. ExPASy TrEMBL
Match:
A0A1S3BJT6 (uncharacterized protein LOC103490375 OS=Cucumis melo OX=3656 GN=LOC103490375 PE=4 SV=1)
HSP 1 Score: 296.2 bits (757), Expect = 1.3e-76
Identity = 149/282 (52.84%), Postives = 195/282 (69.15%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIPIKGN+ +GEPP+KRLSD +FR +LD+GLCFRCNDKYS GHRCK +EKRE+M
Sbjct: 221 MKQITIPIKGNFKKGEPPVKRLSDAEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFF 280
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
I+NEEE + E E E EG VELK LE+ D +E++T+ S+KGTMKI G I+ +E+
Sbjct: 281 IMNEEEEDEEGESHEEVTEGTVELKTLELTEDVAIEMKTMTRLSSKGTMKIKGWIRQKEI 340
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
++LIDSGATHNFIH +LV +LKL + T FG TIG+G+ KG+G+C+RV++
Sbjct: 341 VILIDSGATHNFIHQSLVVDLKLGMEQHTQFGYTIGNGTRCKGKGICRRVEVKLEEITII 400
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + IHWPSLTM F G + IILKGDP+L R ECSL+
Sbjct: 401 ADFLAVELGSVDAVLEMQWLDTTGTMKIHWPSLTMSFWNGGRQIILKGDPSLIRAECSLR 460
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTW+E+DQ FLL++ + EVE E K ++++KGDE P
Sbjct: 461 TLEKTWQEDDQGFLLEWANMEVETEDTYKTDKKEKGDEADIP 502
BLAST of PI0017657 vs. ExPASy TrEMBL
Match:
A0A5A7UM77 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002210 PE=4 SV=1)
HSP 1 Score: 294.3 bits (752), Expect = 5.0e-76
Identity = 146/282 (51.77%), Postives = 198/282 (70.21%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIPIKGN+ +GEPP+KRLSD +FR +LD+GLCFRCNDKYS GHRCK +EKRE+M
Sbjct: 279 MKQITIPIKGNFKKGEPPVKRLSDAEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFF 338
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
I+NEEE + E + + E EG VELK LE+ +A +EL+T+ S+KGTMK+ G I+ +EV
Sbjct: 339 IMNEEEEDEEGDSQEEVIEGTVELKTLELTDEAAIELKTMTRISSKGTMKLKGWIRQKEV 398
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
+VLIDSGATHNFIHH+L +L+L + P T FG TIG+G+ +G+G+C+RV++
Sbjct: 399 VVLIDSGATHNFIHHSLAADLELGMDPHTPFGYTIGNGTRCRGKGICRRVEVKLDEITII 458
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + IHWPSLTM F G + I+LKGDP+L R ECSL+
Sbjct: 459 ADFLAVELGSVDAVLGMQWLDTTGTMKIHWPSLTMSFWNGGRQIVLKGDPSLIRAECSLR 518
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTW+EEDQ FLL++ + +VE + K +++++GDE P
Sbjct: 519 TLEKTWQEEDQGFLLEWANMKVETDDTYKTDEKEEGDEADIP 560
BLAST of PI0017657 vs. ExPASy TrEMBL
Match:
A0A5A7T8C0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00570 PE=4 SV=1)
HSP 1 Score: 293.5 bits (750), Expect = 8.5e-76
Identity = 148/282 (52.48%), Postives = 194/282 (68.79%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIPIKGN+ +GEPP+KRLSD +FR +LD+GLCFRCNDKYS GHRCK +EKRE+M
Sbjct: 279 MKQITIPIKGNFKKGEPPVKRLSDAEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFF 338
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
I+NEEE + E + E EG VELK LE+ DA +EL+T+ S+K TMK+ G I+ +E+
Sbjct: 339 IMNEEEEDEEGDSHEEVTEGTVELKTLELTEDAAIELKTMTRLSSKRTMKLKGWIRQKEI 398
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
++LIDSGATHNFIH +L +LKL + T FG TIG+G+ KG+G+C+RV++
Sbjct: 399 VILIDSGATHNFIHQSLAVDLKLGMEQHTQFGYTIGNGTRCKGKGICRRVEVKLEEITII 458
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + IHWPSLTM F G + IILKGDP+L R ECSL+
Sbjct: 459 ADFLAVELGSVDAVLGMQWLDTTGTMKIHWPSLTMSFWNGGRQIILKGDPSLIRAECSLR 518
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTW+EEDQ FLL++ + EVE E K ++++KGDE P
Sbjct: 519 TLEKTWQEEDQGFLLEWANMEVETEDTYKTDEKEKGDEADIP 560
BLAST of PI0017657 vs. ExPASy TrEMBL
Match:
A0A5D3DZ80 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00740 PE=4 SV=1)
HSP 1 Score: 293.5 bits (750), Expect = 8.5e-76
Identity = 146/282 (51.77%), Postives = 189/282 (67.02%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIP+KG+Y +GEPP+KRLSD +FR +LDKGLCFRCN+KYS GHRCK++EKRE+ML
Sbjct: 248 MKQITIPLKGSYQKGEPPVKRLSDAEFRSRLDKGLCFRCNEKYSHGHRCKIKEKRELMLF 307
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
ILNEEE E E + +E+K LE L +A +E R I +TKGTMK+ G +KG+E+
Sbjct: 308 ILNEEESTGEGEGSDTQKAEPLEIKQLEALDEAVIEYRAITSLTTKGTMKLRGVVKGKEI 367
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
IVLIDSGATHNFIH+ LV+E K+P+ T F VTIGDG+ KG+G+C RV++
Sbjct: 368 IVLIDSGATHNFIHYELVKEKKIPIDRNTQFRVTIGDGTSCKGKGICSRVEIQLEELTIV 427
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + +HWPSLTM+F ++LKGDPAL R ECS K
Sbjct: 428 ADLLAVELGKVDIVLGMQWLDTTGTMKVHWPSLTMVFWKEGNKVVLKGDPALIRAECSQK 487
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTW++EDQ FL+ +Q+ E E E +E Q + GDE P
Sbjct: 488 TLEKTWDDEDQGFLIDWQNYETENESKESKTQSQHGDEEELP 529
BLAST of PI0017657 vs. ExPASy TrEMBL
Match:
A0A5D3E325 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00690 PE=4 SV=1)
HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 148/282 (52.48%), Postives = 183/282 (64.89%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIP+KG+Y +GEPP+KRLSD +FR +LDKGLCFRCN+KYS GHRCK++EKRE+ML
Sbjct: 277 MKQITIPLKGSYQKGEPPVKRLSDAEFRARLDKGLCFRCNEKYSHGHRCKIKEKRELMLF 336
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
ILNEEE E E G VE+ LE + +E R I +TKGTMK+ G +KG+EV
Sbjct: 337 ILNEEESTEEGEGSEAPNTGPVEINQLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEV 396
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
IVLIDSGATHNFIHH LV E K+P+ T FG+TIGDG+ KG G+C +V++
Sbjct: 397 IVLIDSGATHNFIHHELVTERKIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVV 456
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + IHWPSLTM+F ++LKGDPAL R ECSLK
Sbjct: 457 TDLLVVGLGTIDVVLGMQWLDTTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLK 516
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTWE EDQ FLL +Q E+E E + + GDE P
Sbjct: 517 TLEKTWEAEDQGFLLDWQRYEIENEDADSKNTSQTGDEEGLP 558
BLAST of PI0017657 vs. NCBI nr
Match:
XP_031745528.1 (uncharacterized protein LOC116405915 [Cucumis sativus])
HSP 1 Score: 297.7 bits (761), Expect = 9.3e-77
Identity = 155/284 (54.58%), Postives = 196/284 (69.01%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
+KQVTIPIKGNY + EPP+KRLSD +FR +LDKGLCF+CN++YS GHRCK+++KRE+ML
Sbjct: 278 LKQVTIPIKGNYQKSEPPVKRLSDAEFRARLDKGLCFKCNERYSPGHRCKMKDKRELMLF 337
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
I+NEEE +E+ E E ++EL L + E+EL+ I G ++KGTMKI G+IKG+EV
Sbjct: 338 IMNEEESLEDEDRTEETNEEVLELNQLTLEEGTEIELKAIHGLTSKGTMKIKGEIKGKEV 397
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
++LIDSGATHNFIH+ +VEE+ L + T FGVTIGDG+ +GRGVC R++L
Sbjct: 398 LILIDSGATHNFIHNKIVEEVGLELENHTPFGVTIGDGTRCQGRGVCNRLELKLKEITIV 457
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + IHWPSLTM F +G K ILKGDP+L R ECSLK
Sbjct: 458 ADFLAIELGSVDVILGMQWLNTTGTMKIHWPSLTMTFRMGKKQFILKGDPSLIRAECSLK 517
Query: 241 TITKTWEEEDQAFLLKFQDREVE--GELEEKLEQRKKGDERSCP 256
TI KTWEE+DQ FLL+ Q+ E E GEL+E QR KGDE P
Sbjct: 518 TIEKTWEEDDQGFLLEMQNYEAEEDGELDE--VQRVKGDEEESP 559
BLAST of PI0017657 vs. NCBI nr
Match:
XP_008448087.1 (PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo])
HSP 1 Score: 296.2 bits (757), Expect = 2.7e-76
Identity = 149/282 (52.84%), Postives = 195/282 (69.15%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIPIKGN+ +GEPP+KRLSD +FR +LD+GLCFRCNDKYS GHRCK +EKRE+M
Sbjct: 221 MKQITIPIKGNFKKGEPPVKRLSDAEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFF 280
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
I+NEEE + E E E EG VELK LE+ D +E++T+ S+KGTMKI G I+ +E+
Sbjct: 281 IMNEEEEDEEGESHEEVTEGTVELKTLELTEDVAIEMKTMTRLSSKGTMKIKGWIRQKEI 340
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
++LIDSGATHNFIH +LV +LKL + T FG TIG+G+ KG+G+C+RV++
Sbjct: 341 VILIDSGATHNFIHQSLVVDLKLGMEQHTQFGYTIGNGTRCKGKGICRRVEVKLEEITII 400
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + IHWPSLTM F G + IILKGDP+L R ECSL+
Sbjct: 401 ADFLAVELGSVDAVLEMQWLDTTGTMKIHWPSLTMSFWNGGRQIILKGDPSLIRAECSLR 460
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTW+E+DQ FLL++ + EVE E K ++++KGDE P
Sbjct: 461 TLEKTWQEDDQGFLLEWANMEVETEDTYKTDKKEKGDEADIP 502
BLAST of PI0017657 vs. NCBI nr
Match:
KAA0055376.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 294.3 bits (752), Expect = 1.0e-75
Identity = 146/282 (51.77%), Postives = 198/282 (70.21%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIPIKGN+ +GEPP+KRLSD +FR +LD+GLCFRCNDKYS GHRCK +EKRE+M
Sbjct: 279 MKQITIPIKGNFKKGEPPVKRLSDAEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFF 338
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
I+NEEE + E + + E EG VELK LE+ +A +EL+T+ S+KGTMK+ G I+ +EV
Sbjct: 339 IMNEEEEDEEGDSQEEVIEGTVELKTLELTDEAAIELKTMTRISSKGTMKLKGWIRQKEV 398
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
+VLIDSGATHNFIHH+L +L+L + P T FG TIG+G+ +G+G+C+RV++
Sbjct: 399 VVLIDSGATHNFIHHSLAADLELGMDPHTPFGYTIGNGTRCRGKGICRRVEVKLDEITII 458
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + IHWPSLTM F G + I+LKGDP+L R ECSL+
Sbjct: 459 ADFLAVELGSVDAVLGMQWLDTTGTMKIHWPSLTMSFWNGGRQIVLKGDPSLIRAECSLR 518
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTW+EEDQ FLL++ + +VE + K +++++GDE P
Sbjct: 519 TLEKTWQEEDQGFLLEWANMKVETDDTYKTDEKEEGDEADIP 560
BLAST of PI0017657 vs. NCBI nr
Match:
KAA0039128.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 293.5 bits (750), Expect = 1.8e-75
Identity = 148/282 (52.48%), Postives = 194/282 (68.79%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIPIKGN+ +GEPP+KRLSD +FR +LD+GLCFRCNDKYS GHRCK +EKRE+M
Sbjct: 279 MKQITIPIKGNFKKGEPPVKRLSDAEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFF 338
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
I+NEEE + E + E EG VELK LE+ DA +EL+T+ S+K TMK+ G I+ +E+
Sbjct: 339 IMNEEEEDEEGDSHEEVTEGTVELKTLELTEDAAIELKTMTRLSSKRTMKLKGWIRQKEI 398
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
++LIDSGATHNFIH +L +LKL + T FG TIG+G+ KG+G+C+RV++
Sbjct: 399 VILIDSGATHNFIHQSLAVDLKLGMEQHTQFGYTIGNGTRCKGKGICRRVEVKLEEITII 458
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + IHWPSLTM F G + IILKGDP+L R ECSL+
Sbjct: 459 ADFLAVELGSVDAVLGMQWLDTTGTMKIHWPSLTMSFWNGGRQIILKGDPSLIRAECSLR 518
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTW+EEDQ FLL++ + EVE E K ++++KGDE P
Sbjct: 519 TLEKTWQEEDQGFLLEWANMEVETEDTYKTDEKEKGDEADIP 560
BLAST of PI0017657 vs. NCBI nr
Match:
TYK28976.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 293.5 bits (750), Expect = 1.8e-75
Identity = 146/282 (51.77%), Postives = 189/282 (67.02%), Query Frame = 0
Query: 1 MKQVTIPIKGNYGRGEPPLKRLSDTKFRDKLDKGLCFRCNDKYSLGHRCKVREKREMMLL 60
MKQ+TIP+KG+Y +GEPP+KRLSD +FR +LDKGLCFRCN+KYS GHRCK++EKRE+ML
Sbjct: 248 MKQITIPLKGSYQKGEPPVKRLSDAEFRSRLDKGLCFRCNEKYSHGHRCKIKEKRELMLF 307
Query: 61 ILNEEEGEMEEEPRVERGEGIVELKNLEVLVDAEVELRTIMGFSTKGTMKILGKIKGREV 120
ILNEEE E E + +E+K LE L +A +E R I +TKGTMK+ G +KG+E+
Sbjct: 308 ILNEEESTGEGEGSDTQKAEPLEIKQLEALDEAVIEYRAITSLTTKGTMKLRGVVKGKEI 367
Query: 121 IVLIDSGATHNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKLNC------ 180
IVLIDSGATHNFIH+ LV+E K+P+ T F VTIGDG+ KG+G+C RV++
Sbjct: 368 IVLIDSGATHNFIHYELVKEKKIPIDRNTQFRVTIGDGTSCKGKGICSRVEIQLEELTIV 427
Query: 181 ---------------------TTGFIDIHWPSLTMLFMVGDKPIILKGDPALTRMECSLK 240
TTG + +HWPSLTM+F ++LKGDPAL R ECS K
Sbjct: 428 ADLLAVELGKVDIVLGMQWLDTTGTMKVHWPSLTMVFWKEGNKVVLKGDPALIRAECSQK 487
Query: 241 TITKTWEEEDQAFLLKFQDREVEGELEEKLEQRKKGDERSCP 256
T+ KTW++EDQ FL+ +Q+ E E E +E Q + GDE P
Sbjct: 488 TLEKTWDDEDQGFLIDWQNYETENESKESKTQSQHGDEEELP 529
BLAST of PI0017657 vs. TAIR 10
Match:
AT3G30770.1 (Eukaryotic aspartyl protease family protein )
HSP 1 Score: 46.6 bits (109), Expect = 3.5e-05
Identity = 26/79 (32.91%), Postives = 40/79 (50.63%), Query Frame = 0
Query: 94 EVELRTIMGFSTKGTMKILGKIKGREVIVLIDSGATHNFIHHNLVEELKLPVTPRTTFGV 153
+V+ ++ F+ M+ G I +V+V+IDSGAT+NFI L LKLP + V
Sbjct: 269 QVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASV 328
Query: 154 TIGDGSDRKGRGVCKRVKL 173
+G + G C + L
Sbjct: 329 LLGQRQCIQTIGTCFGINL 347
BLAST of PI0017657 vs. TAIR 10
Match:
AT3G29750.1 (Eukaryotic aspartyl protease family protein )
HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 31/103 (30.10%), Postives = 47/103 (45.63%), Query Frame = 0
Query: 75 VERGEGIVELKNLEVLVDAEVELR-----TIMGFSTKGTMKILGKIKGREVIVLIDSGAT 134
V++ +G++ LE L LR ++ + M+ G I +V+V IDSGAT
Sbjct: 87 VKKKKGVI--NELEELEQDSYTLRQGMEQLVIDLTRNKGMRFYGFILDHKVVVAIDSGAT 146
Query: 135 HNFIHHNLVEELKLPVTPRTTFGVTIGDGSDRKGRGVCKRVKL 173
NFI L LKLP + V +G + G C ++L
Sbjct: 147 DNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRL 187
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BJT6 | 1.3e-76 | 52.84 | uncharacterized protein LOC103490375 OS=Cucumis melo OX=3656 GN=LOC103490375 PE=... | [more] |
A0A5A7UM77 | 5.0e-76 | 51.77 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7T8C0 | 8.5e-76 | 52.48 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3DZ80 | 8.5e-76 | 51.77 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5D3E325 | 1.9e-75 | 52.48 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |
XP_031745528.1 | 9.3e-77 | 54.58 | uncharacterized protein LOC116405915 [Cucumis sativus] | [more] |
XP_008448087.1 | 2.7e-76 | 52.84 | PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo] | [more] |
KAA0055376.1 | 1.0e-75 | 51.77 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0039128.1 | 1.8e-75 | 52.48 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gyp... | [more] |
TYK28976.1 | 1.8e-75 | 51.77 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT3G30770.1 | 3.5e-05 | 32.91 | Eukaryotic aspartyl protease family protein | [more] |
AT3G29750.1 | 2.9e-04 | 30.10 | Eukaryotic aspartyl protease family protein | [more] |