PI0017574 (gene) Melon (PI 482460) v1

Overview


Name	PI0017574
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 4177433 .. 4177773 (+)
RNA-Seq Expression	PI0017574
Synteny	PI0017574

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACTCAGAAGCTTTTTACTTTGTCCATTGCCATCGTGGTCCTATTTTCTTGTTTTGTCTCATCGAGTATTATTCTATCTCTCAACTATTGTAATTTCATAATGTATTTTTTTTTTGTTATTTTAAACTTAACGAAGTATTTATTAATATGCTAATTCTTTGTCACATGGCAGTAGAGGAAGATGGTCTATGGAACTGTGTTATACCATGTTCTAATCACAACGGAGATCTTTTGTGTAATACTGAATGCATCGAACAAGACCAAGGCGCTGGATTTTGTGTTCCCAAATTACTTGGTATTTCTGATAAAAAAGTTTGTTGTTGCAATAATGGATGA

mRNA sequence

ATGGGAACTCAGAAGCTTTTTACTTTGTCCATTGCCATCGTGGTCCTATTTTCTTGTTTTGTCTCATCGATAGAGGAAGATGGTCTATGGAACTGTGTTATACCATGTTCTAATCACAACGGAGATCTTTTGTGTAATACTGAATGCATCGAACAAGACCAAGGCGCTGGATTTTGTGTTCCCAAATTACTTGGTATTTCTGATAAAAAAGTTTGTTGTTGCAATAATGGATGA

Coding sequence (CDS)

ATGGGAACTCAGAAGCTTTTTACTTTGTCCATTGCCATCGTGGTCCTATTTTCTTGTTTTGTCTCATCGATAGAGGAAGATGGTCTATGGAACTGTGTTATACCATGTTCTAATCACAACGGAGATCTTTTGTGTAATACTGAATGCATCGAACAAGACCAAGGCGCTGGATTTTGTGTTCCCAAATTACTTGGTATTTCTGATAAAAAAGTTTGTTGTTGCAATAATGGATGA

Protein sequence

MGTQKLFTLSIAIVVLFSCFVSSIEEDGLWNCVIPCSNHNGDLLCNTECIEQDQGAGFCVPKLLGISDKKVCCCNNG

Homology

[Close]

BLAST of PI0017574 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.9e-29
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGLWNCVIPCSNHNGDLLCNTECIEQDQGAGFCV 60
          M TQKLF +S+ + V FSCF SS+E D LWNCVIPCSN+NGD+LCNT CIEQD+GAGFCV
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCV 60

Query: 61 PKLLGISDKKVCCCNNG 78
          PKL GISD KVCCCNNG
Sbjct: 61 PKLPGISDMKVCCCNNG 77

[Close]

BLAST of PI0017574 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGLWNCVIPCSNHNGDLLCNTECIEQDQGAGFCV 60
          M T+KL  + +AI VL +CFV+  E  GLWNC+ PCS     L C  +C   ++G G C+
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGLWNCIRPCSETYKSLSCYVDCGALNKGTGACI 60

Query: 61 PKLLGISDKKVCCC 75
          PK   +SD+ VCCC
Sbjct: 61 PK-RPVSDEYVCCC 73

[Close]

BLAST of PI0017574 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGL-WNCVIPCSNHNGDLLCNTECIEQDQGAGFC 60
          M TQKL T+SI ++++F+C  S+ + D L  +CV PCS+   D  C  +CI+++ GAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 VPKLLGISDKKVCCCN 76
           PKL   S  K CCCN
Sbjct: 61 YPKL--PSTDKDCCCN 74

[Close]

BLAST of PI0017574 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGL-WNCVIPCSNHNGDLLCNTECIEQDQGAGFC 60
          M TQKL T+SI ++V+F C VS+ + D L  +CV PC +   D  C  +CI ++ GAGFC
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTKGDVLNVHCVRPCYDTYDDESCYNDCIRENLGAGFC 60

Query: 61 VPKLLGISDKKVCCCNN 77
           PKL   S  K CCCN+
Sbjct: 61 YPKL--PSTDKDCCCND 75

[Close]

BLAST of PI0017574 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.8e-28
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGLWNCVIPCSNHNGDLLCNTECIEQDQGAGFCV 60
          M TQKLF +S+ + V FSCF SS+E D LWNCVIPCSN+NGD+LCNT CIEQD+GAGFCV
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCV 60

Query: 61 PKLLGISDKKVCCCNNG 78
          PKL GISD KVCCCNNG
Sbjct: 61 PKLPGISDMKVCCCNNG 77

[Close]

BLAST of PI0017574 vs. NCBI nr
Match: KAA0043464.1 (hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 3.9e-10
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGLWNCVIPCSNHNGDLLCNTECIEQDQGAGFCV 60
          M T+KL  + +AI VL +CFV+  E  GLWNC+ PCS     L C  +C   ++G G C+
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGLWNCIRPCSETYKSLSCYVDCGALNKGTGACI 60

Query: 61 PKLLGISDKKVCCC 75
          PK   +SD+ VCCC
Sbjct: 61 PK-RPVSDEYVCCC 73

[Close]

BLAST of PI0017574 vs. NCBI nr
Match: KAG6605731.1 (hypothetical protein SDJN03_03048, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.4 bits (176), Expect = 1.9e-09
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGLWNCVIPCSNHNGDLLCNTECIEQDQGAGFCV 60
          M T KLF + IA++ L SC V+S E  GLW+C+ PC+    + +C  +C+ + +G G C+
Sbjct: 1  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCI 60

Query: 61 PKLLGISDKKVCCC 75
          PK  G    ++ CC
Sbjct: 61 PKRDGTGGGELLCC 74

[Close]

BLAST of PI0017574 vs. NCBI nr
Match: KAG7035638.1 (hypothetical protein SDJN02_02436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.4 bits (176), Expect = 1.9e-09
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGLWNCVIPCSNHNGDLLCNTECIEQDQGAGFCV 60
          M T KLF + IA++ L SC V+S E  GLW+C+ PC+    + +C  +C+ + +G G C+
Sbjct: 13 MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCI 72

Query: 61 PKLLGISDKKVCCC 75
          PK  G    ++ CC
Sbjct: 73 PKRDGTGGGELLCC 86

[Close]

BLAST of PI0017574 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 2.5e-09
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 1  MGTQKLFTLSIAIVVLFSCFVSSIEEDGL-WNCVIPCSNHNGDLLCNTECIEQDQGAGFC 60
          M TQKL T+SI ++++F+C  S+ + D L  +CV PCS+   D  C  +CI+++ GAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 VPKLLGISDKKVCCCN 76
           PKL   S  K CCCN
Sbjct: 61 YPKL--PSTDKDCCCN 74

The following BLAST results are available for this feature:

BLAST of PI0017574 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017574 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1R8	8.9e-29	76.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1	[more]
A0A5A7TJH1	1.9e-10	45.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LHG9	1.2e-09	47.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1	[more]
A0A0A0LJG5	2.1e-09	48.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1	[more]

BLAST of PI0017574 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54497.1	1.8e-28	76.62	hypothetical protein Csa_012842 [Cucumis sativus]	[more]
KAA0043464.1	3.9e-10	45.95	hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa]	[more]
KAG6605731.1	1.9e-09	39.19	hypothetical protein SDJN03_03048, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7035638.1	1.9e-09	39.19	hypothetical protein SDJN02_02436, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN61228.1	2.5e-09	47.37	hypothetical protein Csa_006463 [Cucumis sativus]	[more]

BLAST of PI0017574 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..19 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017574.1	PI0017574.1	mRNA