PI0017476 (gene) Melon (PI 482460) v1

Overview


Name	PI0017476
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RRP15-like protein
Location	chr01: 4148996 .. 4151552 (+)
RNA-Seq Expression	PI0017476
Synteny	PI0017476

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGACGTTGGGAATGCGGTAGAATTGGTTAGAGGTGCGAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTTTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACAATGATGATGATGACGGTGAGAAGGCTCCTACGGTTAAAAATGAGAGTAAAATTTTGATGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTAAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCGGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAGCATATCTGATGAAACTCTGGTAGTTTATCTTAAATATGTCCGAATTGTTTTCAACAGTTAAAGTAATGAAGACATGATTGTGCCATATTTGTGATGCAGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGTTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTATTTCCTTTTAAATCAAATATCTTGTTTGCTCTATGATTTAGCTTTTGCTTGAAATTGGCTGACTGTAAATGTTCGAATATTGCAGGTAGGAGAAAAAGGTCATGTGAAACCGGCTACATACTTGGATTCTCACGAAAAGTTTCTTATTGGTGTTGCTACAAAAGGAGGTAGCATAGTTCTATTTTACTTTGAGATGGGCATGGTTATCTTTTTATTTTGACTTTGTTTATTATGTCTCTCATTATACTAACACATTTATCTCCATGTGTATTGTTGCTTGCTGATTGTTAGTTGTCAAGTTGTTTAACGCTGTAAGTAGCCATGTTTTGATTTCAGACAATTATTTTGCCACATCCTCCTTATCTATGTTGTGTTCATCGCTGAATTCCATGATTTTCAATATGACAGGTCAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCGAGAACTAAAGATGCTAAAGGTATTATGTCTCCTACGTAACTTTGATCTCAGAAGTTTACAGAATCTCAGATGGTGTATGAGTAATATAATCTTCAGTTTCTTTTCTCTTGCCACGTGAATATGTTGTCCCTAAATTTTCATTCGGTTGATGTTGTCTCTACATGATGCATCATATTAAATCTTGTAGCTTAATTTTCCTAGTCATATGATGTATGTGTTTTATTTCTTTTTGTGGTTTTTGCTTTGTACTTGTTGAAAATTATGTTTGTATAGTCTGACCACATATCGAACTTCTAATGAATGAGTCATGGTCAATTTGACTAATTTATTGACTTTGATGGGAAATATGTGTGATTGGAGTAATCGGTGATTTACAAGTTATGCCCCTCAAATTTATCGATCTATTAGTTTCTCATTCTTACTCCCAGTCAATTAATGACTTCCCCTGTTTGCTTATATAGTAATAGTATTATCTCATGTTCAGCGTAACCTTGCTAGACCCATTTTGTTTGTGTATTAAGACACTTATCCTTTATTTCTTGATTTGTGAATCTGAGTTGCCATTCAAGATTGAGGGCGAAACCATGTTTTGAGTGGTTTTTCATTCTATCATTTCTCATTCTGAGCAAATTATTTGGTTTATATTGCCAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGGTCAGTTATTTTTCTAGTTTTTAGTTCTCAACTAACTGCTGGTAAATTCTATTTTTAATCTCTTAACAAATGATTTTAGTTTTTACAAACACCCAAGTCTCTGTGCCCGAGGCAGAGCGTATATATGGCCATCATCATTATTGTACGTGGGTAGTGAAATAGGAAGGGTAGGCACATGGGTGGAGCAAGAACGGGGATAACTTTCATGTCTCCTCAAAATTTCTGTTAAATTTATGGAGATCGAGATAGAGATCTCCTACGGGGAATTCATGACGATGATAATTTAATAATACAAAATTAAAAAAGGTAAATGGGATGGGGAACGGGGACCAAGCCCTATGGGGAAAATTGACATAGAAAGGGGTGTTGATTAAGGGAGTGAAACTCTGGTCACCATCATACACTATCTGAGTGTCTGTTCTTTCATGTCCATAATGCAACAAACTCAAATAGCCATCTCTGTGTTGAACAGTTAAACACATCAGGTGGTGCAGCGGACGCTGAAGGCCCTGCCTGGGCTCCATTACGCGATAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGTAAGATAAGATATACTTTCAAAGTCTACTGTCGGTTGGATCTCTGCTTTCTTCAGTTCCGATATTCATATCGTTTGGATTGATTATACTTGCAGGATAACATGATGCTCGCGGCCGAGGACAATGGGAGGGTGTTGGAAGAAAGTAGTTCAGATGAAGATGATTGA

mRNA sequence

ATGACTGACGTTGGGAATGCGGTAGAATTGGTTAGAGGTGCGAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTTTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACAATGATGATGATGACGGTGAGAAGGCTCCTACGGTTAAAAATGAGAGTAAAATTTTGATGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTAAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCGGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAGCATATCTGATGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGTTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTAGGAGAAAAAGGTCATGTGAAACCGGCTACATACTTGGATTCTCACGAAAAGTTTCTTATTGGTGTTGCTACAAAAGGAGTTGTCAAGTTGTTTAACGCTGTCAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCGAGAACTAAAGATGCTAAAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGTTAAACACATCAGGTGGTGCAGCGGACGCTGAAGGCCCTGCCTGGGCTCCATTACGCGATAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGATAACATGATGCTCGCGGCCGAGGACAATGGGAGGGTGTTGGAAGAAAGTAGTTCAGATGAAGATGATTGA

Coding sequence (CDS)

ATGACTGACGTTGGGAATGCGGTAGAATTGGTTAGAGGTGCGAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTTTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACAATGATGATGATGACGGTGAGAAGGCTCCTACGGTTAAAAATGAGAGTAAAATTTTGATGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTAAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCGGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAGCATATCTGATGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGTTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTAGGAGAAAAAGGTCATGTGAAACCGGCTACATACTTGGATTCTCACGAAAAGTTTCTTATTGGTGTTGCTACAAAAGGAGTTGTCAAGTTGTTTAACGCTGTCAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCGAGAACTAAAGATGCTAAAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGTTAAACACATCAGGTGGTGCAGCGGACGCTGAAGGCCCTGCCTGGGCTCCATTACGCGATAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGATAACATGATGCTCGCGGCCGAGGACAATGGGAGGGTGTTGGAAGAAAGTAGTTCAGATGAAGATGATTGA

Protein sequence

MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDNDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAKQLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMLAAEDNGRVLEESSSDEDD

Homology

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BLAST of PI0017476 vs. ExPASy Swiss-Prot
Match: Q3T062 (RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.4e-08
Identity = 86/279 (30.82%), Postives = 128/279 (45.88%), Query Frame = 0


Query: 34  SGNKVKIDKKMKKLFQKRAREYNSDDDNDDDDGEKAPTVKNESKILMRSHEEEVGDEEFS 93
           +G K+KI  + K++    A   +  +D D D  +      NE  +     E+    + FS
Sbjct: 12  AGKKLKISLRKKRMKMVVASVASELEDKDKDASD------NEGSLGSCGLEK----DHFS 71

Query: 94  EGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRA-FRAAFMSILKKSISDETLGPIL 153
            G+E  +  N D     +D+N        + T G  A +  A   IL K I  E+   IL
Sbjct: 72  SGDEAVEADNEDEAEPREDDN----DSAAEATAGANAGWADAMARILSKKI-PESKPTIL 131

Query: 154 SANKKL--VAEKLAEEEAERKFKGEARKAKQLVGEKGHVKPATYLDSH-EKFLIGVATKG 213
             NK+L    EKL +E  E++ + + ++  +++     VKP    D   E+ L  +AT+G
Sbjct: 132 VRNKELEKEKEKLKQERLEKRKQLDKKREWEMM---CRVKPDVVKDKETERNLQRIATRG 191

Query: 214 VVKLFNAVNKAQ----HAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLN 273
           VV+LFNAV K Q       K    S  K AK I+   K+ F S L     SA+  N+   
Sbjct: 192 VVQLFNAVQKHQKNVDEKVKEAGGSIRKRAKLISSVSKKDFISVLRGMDGSASEKNSAGK 251

Query: 274 TSGG----AADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 301
            S      A   EGP W  LRD++M+  + +KDWDK  D
Sbjct: 252 NSKAKQTEAKSEEGPGWTILRDDFMM-GASMKDWDKESD 271

[Close]

BLAST of PI0017476 vs. ExPASy Swiss-Prot
Match: Q5M947 (RRP15-like protein OS=Rattus norvegicus OX=10116 GN=Rrp15 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.0e-06
Identity = 75/273 (27.47%), Postives = 125/273 (45.79%), Query Frame = 0


Query: 35  GNKVKIDKKMKKLFQKRAREYNSDDDNDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSE 94
           G K+K   K KK  +K A               KA   K E ++   S  E   + E  +
Sbjct: 13  GGKLKRSPKKKKKMKKVA---------------KAAVSKLEDELKDSSGGEGSCESEMDD 72

Query: 95  GEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKKSISDETLGPILSA 154
            ++   + +++  +   +E  E+    +  T     +  A   IL K  + ++   IL+ 
Sbjct: 73  SDDGAAEADSEDNVESCEEENEVAAESSAGTNS--GWADAMAKILNKK-TPKSKPTILTK 132

Query: 155 NKKL--VAEKLAEEEAERKFKGEARKAKQLVGEKGHVKPATYLDSH-EKFLIGVATKGVV 214
           NK+L    EKL +E  E++ + + ++  +++     VKP    D   E+ L  +AT+GVV
Sbjct: 133 NKELEKEKEKLKQERLEKRKQIDKKREWEML---CRVKPDVIKDKEAERNLQRIATRGVV 192

Query: 215 KLFNAVNKAQ----HAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTS 274
           +LFNAV K Q       K +  S  K AK ++   K+ F S L     ++ NS+A  +  
Sbjct: 193 QLFNAVQKHQRNVDEKVKEVGGSIRKRAKLMSTVSKKDFISVLRGMDGASENSSAGKSPK 252

Query: 275 GGAADA---EGPAWAPLRDNYMLTNSKLKDWDK 298
               +    EGP W  LRD++M+  + +KDWDK
Sbjct: 253 ARQTEVKSEEGPGWKILRDDFMM-GASMKDWDK 263

[Close]

BLAST of PI0017476 vs. ExPASy Swiss-Prot
Match: Q7ZV20 (RRP15-like protein OS=Danio rerio OX=7955 GN=rrp15 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.3e-05
Identity = 67/244 (27.46%), Postives = 111/244 (45.49%), Query Frame = 0


Query: 82  SHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKK 141
           S++EE G +   EG +     + D +   D+E  E  P           +  A   +L K
Sbjct: 25  SNDEESGADSDHEGADAEN--SGDEDGKSDEEQNEENPN--------AGWAEAMAKVLGK 84

Query: 142 SISDETLGPILSANKKL--VAEKLAEEEAERKFKGEARKAKQLVGEKGHVKPATYLD-SH 201
              D T   IL  NK+L  + EK  +E  E+K + + ++A + +  +   KP    D  H
Sbjct: 85  KTPD-TKPSILLKNKQLDKIKEKEKKERLEKKKQLDKKRAWENICRE---KPDVVQDREH 144

Query: 202 EKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSAT 261
           E+ L  VAT+GVV+LFNA+   ++ QK +N  R K+     +++ +   S   K  +   
Sbjct: 145 ERNLQRVATRGVVQLFNAL---KNHQKNVN-ERIKEVGGSERKKSKILSSVSKKDFIDVL 204

Query: 262 NSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMLAAEDNGRVLEESSS 321
                         AE  +W+ L+D++M+  + +KDWDK  D      E++ R   +  S
Sbjct: 205 RGTDVAVKKEKEIKAEKSSWSVLKDDFMM-GASMKDWDKERDEDGGGGEEDEREPAQEYS 249

Query: 322 DEDD 323
            E D
Sbjct: 265 SESD 249

[Close]

BLAST of PI0017476 vs. ExPASy Swiss-Prot
Match: Q9Y3B9 (RRP15-like protein OS=Homo sapiens OX=9606 GN=RRP15 PE=1 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 2.1e-04
Identity = 86/296 (29.05%), Postives = 125/296 (42.23%), Query Frame = 0


Query: 36  NKVKIDKKMKKLFQKRAREYNSDDDNDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEG 95
           N  K  KK  K+          D+  D  D E +   + +       + ++   E  SEG
Sbjct: 15  NLKKTPKKKMKMVTGAVASVLEDEATDTSDSEGSCGSEKD-----HFYSDDDAIEADSEG 74

Query: 96  EEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKKSISDETLGPILSAN 155
           + E  D        E++ +GE   G          +  A   +L K  + E+   IL  N
Sbjct: 75  DAEPCD-------KENENDGESSVGTN------MGWADAMAKVLNKK-TPESKPTILVKN 134

Query: 156 KKLVAEKLAEEEAERKFKGEARKAKQLVGE-KGHVKPATYLDSH-EKFLIGVATKGVVKL 215
           KKL  EK  E+  + + +   ++ K+L  E    VKP    D   E+ L  +AT+GVV+L
Sbjct: 135 KKLEKEK--EKLKQERLEKIKQRDKRLEWEMMCRVKPDVVQDKETERNLQRIATRGVVQL 194

Query: 216 FNAVNKAQ----HAQKGLNPSRTKDAKAINKRRKEAFFSEL----GKPTLSATNSNAKLN 275
           FNAV K Q       K    S  K AK I+   K+ F S L    G    +A++      
Sbjct: 195 FNAVQKHQKNVDEKVKEAGSSMRKRAKLISTVSKKDFISVLRGMDGSTNETASSRKKPKA 254

Query: 276 TSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMLAAEDNGRVLEESSSDED 322
                   EGP W  LRD++M+  + +KDWDK  D       D+ R   ES+SD D
Sbjct: 255 KQTEVKSEEGPGWTILRDDFMM-GASMKDWDKESD-----GPDDSR--PESASDSD 281

[Close]

BLAST of PI0017476 vs. ExPASy Swiss-Prot
Match: Q9CYX7 (RRP15-like protein OS=Mus musculus OX=10090 GN=Rrp15 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-04
Identity = 73/266 (27.44%), Postives = 118/266 (44.36%), Query Frame = 0


Query: 42  KKMKKLFQKRAREYNSDDDNDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKD 101
           KK  K+  K A     D+  D  DGE              S + E+   +    E + +D
Sbjct: 23  KKKMKMVAKAAASKLEDEVKDSSDGE-------------GSCDSEMDHSDDGAAEADSED 82

Query: 102 VNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKL--V 161
              +VE  E+D     +      + G  +  A  M+ +    + ++   IL+ NK+L   
Sbjct: 83  ---NVESCEEDNEDAAES-----SAGTNSGWADAMAKILNKKTPKSKATILTKNKELEKE 142

Query: 162 AEKLAEEEAERKFKGEARKAKQLVGEKGHVKPATYLDSH-EKFLIGVATKGVVKLFNAVN 221
            EKL +E  E++ + + ++  +++     VKP    D   E+ L  +AT+GVV+LFNAV 
Sbjct: 143 KEKLKQERLEKRKQLDKKREWEML---CRVKPDVVKDKEAERNLQRIATRGVVQLFNAVQ 202

Query: 222 KAQ----HAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADA- 281
           K Q       K    S  K AK ++   K+ F S L     ++ NS A  +      +  
Sbjct: 203 KHQRNVGEKVKEAGGSVRKRAKLMSTVSKKDFISVLRGMDGTSRNSPAGKSPKARQTEVK 262

Query: 282 --EGPAWAPLRDNYMLTNSKLKDWDK 298
             E P W  LRD++M+  + +KDWDK
Sbjct: 263 SEESPGWKILRDDFMM-GASMKDWDK 263

[Close]

BLAST of PI0017476 vs. ExPASy TrEMBL
Match: A0A0A0K320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.4e-163
Identity = 312/322 (96.89%), Postives = 315/322 (97.83%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDD 
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDD- 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
            DDDDGEKAP VK ESKIL+RSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG
Sbjct: 61  -DDDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKFTEGCRAFRAAFMSILKK+ISDETLGPILSANKKLVAEKLAEEEAERK KGEARKAK
Sbjct: 121 ITKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAAD EGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NMM AAEDNGRVLE+SSSDEDD
Sbjct: 301 NMMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of PI0017476 vs. ExPASy TrEMBL
Match: A0A1S3CFX9 (RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 9.8e-162
Identity = 307/322 (95.34%), Postives = 314/322 (97.52%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPRMMGGSGNK K+DKKMKKLFQKRAREYNSDD 
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDD- 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
            DD+DGEKAPTVKNESKIL+ SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPG
Sbjct: 61  -DDNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKFTEGCRAFRAAF+SILKK+ISDETLGPILSANKKLVAEKLAEEEAERK KGEARKAK
Sbjct: 121 ITKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NMM AAEDNGRVLE+SSSDEDD
Sbjct: 301 NMMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of PI0017476 vs. ExPASy TrEMBL
Match: A0A5D3BX18 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663G00070 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160
Identity = 305/322 (94.72%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPR+MGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
              +DGEKAPTVKNESKIL+ SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPG
Sbjct: 61  G--NDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKFTEGCRAFRAAF+SILKK+ISDETLGPILSANKKLVAEKLAEEEAERK KGEARKAK
Sbjct: 121 ITKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NMM AAEDNGRVLE+SSSDEDD
Sbjct: 301 NMMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of PI0017476 vs. ExPASy TrEMBL
Match: A0A5A7UXA3 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001920 PE=3 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 8.9e-155
Identity = 298/322 (92.55%), Postives = 307/322 (95.34%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPR+MGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
              +DGEKAPTVKNESKIL+ SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPG
Sbjct: 61  G--NDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKFTEGCRAFRAAF+SILKK+ISDETLGPILSANKKLVAEKLAEEEAERK KGEARKAK
Sbjct: 121 ITKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKG     + VNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKG----GSIVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NMM AAEDNGRVLE+SSSDEDD
Sbjct: 301 NMMTAAEDNGRVLEDSSSDEDD 316

[Close]

BLAST of PI0017476 vs. ExPASy TrEMBL
Match: A0A6J1ENV8 (RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435218 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 7.6e-130
Identity = 260/315 (82.54%), Postives = 281/315 (89.21%), Query Frame = 0


Query: 9   ELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDNDDDDGEK 68
           EL+RG KR KK+GSRN KRPRMMGGSGNKVKID+KM+KLF+KRAREYNSDD++DD +   
Sbjct: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65

Query: 69  APTVKNESKILMRSHEEEVGDEEFSEGEEER-KDVNADVELSEDDENGEIQPGITKFTEG 128
           AP V +ESK+    + EEV DEEFSEGEEE   DVN+D  LSEDDE+G +QPGITKF EG
Sbjct: 66  APAVGDESKV-SEHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEG 125

Query: 129 CRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAKQLVGEKG 188
           CRAFRAAF SILKKSISDETLGPILSANKKLVAEKLAEEEAERK KGEA+K KQL+ EKG
Sbjct: 126 CRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKG 185

Query: 189 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFF 248
           HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAI+KRRKEAFF
Sbjct: 186 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFF 245

Query: 249 SELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMLAAE 308
           SELGKPTLSATNSNAK NTSG AA+AEGPAWAPLRDNYMLTNSKLKDWDKMPDN    AE
Sbjct: 246 SELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDN-TTKAE 305

Query: 309 DNGRVLEESSSDEDD 323
           DNGR+L +SSSD+DD
Sbjct: 306 DNGRMLGDSSSDDDD 318

[Close]

BLAST of PI0017476 vs. NCBI nr
Match: XP_004144556.1 (RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis sativus] >KGN43394.1 hypothetical protein Csa_020346 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 2.8e-163
Identity = 312/322 (96.89%), Postives = 315/322 (97.83%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDD 
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDD- 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
            DDDDGEKAP VK ESKIL+RSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG
Sbjct: 61  -DDDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKFTEGCRAFRAAFMSILKK+ISDETLGPILSANKKLVAEKLAEEEAERK KGEARKAK
Sbjct: 121 ITKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAAD EGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NMM AAEDNGRVLE+SSSDEDD
Sbjct: 301 NMMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of PI0017476 vs. NCBI nr
Match: XP_008462030.1 (PREDICTED: RRP15-like protein [Cucumis melo])

HSP 1 Score: 579.3 bits (1492), Expect = 2.0e-161
Identity = 307/322 (95.34%), Postives = 314/322 (97.52%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPRMMGGSGNK K+DKKMKKLFQKRAREYNSDD 
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDD- 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
            DD+DGEKAPTVKNESKIL+ SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPG
Sbjct: 61  -DDNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKFTEGCRAFRAAF+SILKK+ISDETLGPILSANKKLVAEKLAEEEAERK KGEARKAK
Sbjct: 121 ITKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NMM AAEDNGRVLE+SSSDEDD
Sbjct: 301 NMMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of PI0017476 vs. NCBI nr
Match: TYK03372.1 (RRP15-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 575.9 bits (1483), Expect = 2.2e-160
Identity = 305/322 (94.72%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPR+MGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
              +DGEKAPTVKNESKIL+ SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPG
Sbjct: 61  G--NDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKFTEGCRAFRAAF+SILKK+ISDETLGPILSANKKLVAEKLAEEEAERK KGEARKAK
Sbjct: 121 ITKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NMM AAEDNGRVLE+SSSDEDD
Sbjct: 301 NMMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of PI0017476 vs. NCBI nr
Match: KAA0059257.1 (RRP15-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 556.2 bits (1432), Expect = 1.8e-154
Identity = 298/322 (92.55%), Postives = 307/322 (95.34%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPR+MGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
              +DGEKAPTVKNESKIL+ SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPG
Sbjct: 61  G--NDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKFTEGCRAFRAAF+SILKK+ISDETLGPILSANKKLVAEKLAEEEAERK KGEARKAK
Sbjct: 121 ITKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKG     + VNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKG----GSIVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NMM AAEDNGRVLE+SSSDEDD
Sbjct: 301 NMMTAAEDNGRVLEDSSSDEDD 316

[Close]

BLAST of PI0017476 vs. NCBI nr
Match: XP_038888922.1 (RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benincasa hispida])

HSP 1 Score: 548.5 bits (1412), Expect = 3.8e-152
Identity = 291/322 (90.37%), Postives = 304/322 (94.41%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           M DVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVK+D+KMKKLFQKRAREYNS+DD
Sbjct: 1   MADVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSEDD 60

Query: 61  NDDDDGEKAPTVKNESKILMRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG 120
           ++D   EKAP V+NE K+L+ SH EEVGDEEFSEGE+E KDVNADVELSEDDENGEIQPG
Sbjct: 61  DND---EKAPMVENERKVLVCSHAEEVGDEEFSEGEDEGKDVNADVELSEDDENGEIQPG 120

Query: 121 ITKFTEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 180
           ITKF EGCRAFRAAF SILKKSISDETLGPILSANKKL+ EKLAEEEAERK KG A+K K
Sbjct: 121 ITKFAEGCRAFRAAFRSILKKSISDETLGPILSANKKLIVEKLAEEEAERKVKGLAKKEK 180

Query: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240
           QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK
Sbjct: 181 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 240

Query: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300
           RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD
Sbjct: 241 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPD 300

Query: 301 NMMLAAEDNGRVLEESSSDEDD 323
           NM   AEDNGR+LE+SSSDEDD
Sbjct: 301 NMTTMAEDNGRMLEDSSSDEDD 319

[Close]

BLAST of PI0017476 vs. TAIR 10
Match: AT5G48240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 402 Blast hits to 382 proteins in 162 species: Archae - 0; Bacteria - 4; Metazoa - 139; Fungi - 111; Plants - 54; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). )

HSP 1 Score: 282.3 bits (721), Expect = 4.8e-76
Identity = 164/297 (55.22%), Postives = 209/297 (70.37%), Query Frame = 0


Query: 12  RGAKRRK---KMGSR--NNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD-NDDDD 71
           RG+++R+   K G++   NK+ +    + ++ K+  K +KLFQKRAR+YNSDDD  +DD+
Sbjct: 14  RGSRKRRVGVKKGTKAARNKKQKSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDEEEDDE 73

Query: 72  GEKAPTVKNESKIL----MRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGI 131
            +K P V    KI     M  + EE+G+E+  E              S+ +++GEI+ GI
Sbjct: 74  SKKQPEVTIREKIFSDANMGPNYEEIGEEDNDEN-------------SDGEDHGEIESGI 133

Query: 132 TKF-TEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 191
           TKF T+GC AF+ AF +I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+ARKAK
Sbjct: 134 TKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAK 193

Query: 192 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 251
            L+ EKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + K
Sbjct: 194 HLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLKK 253

Query: 252 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDK 298
           RRKEAF SELGK          K +T    ++ E P WAPLRDNYML N KLKDWDK
Sbjct: 254 RRKEAFLSELGK---------TKTDTKAHKSEDEAPVWAPLRDNYMLANPKLKDWDK 288

[Close]

BLAST of PI0017476 vs. TAIR 10
Match: AT5G48240.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 269.2 bits (687), Expect = 4.2e-72
Identity = 165/335 (49.25%), Postives = 211/335 (62.99%), Query Frame = 0


Query: 12  RGAKRRK---KMGSR--NNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD-NDDDD 71
           RG+++R+   K G++   NK+ +    + ++ K+  K +KLFQKRAR+YNSDDD  +DD+
Sbjct: 14  RGSRKRRVGVKKGTKAARNKKQKSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDEEEDDE 73

Query: 72  GEKAPTVKNESKIL----MRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGI 131
            +K P V    KI     M  + EE+G+E+  E              S+ +++GEI+ GI
Sbjct: 74  SKKQPEVTIREKIFSDANMGPNYEEIGEEDNDEN-------------SDGEDHGEIESGI 133

Query: 132 TKF-TEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 191
           TKF T+GC AF+ AF +I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+ARKAK
Sbjct: 134 TKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAK 193

Query: 192 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 251
            L+ EKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + K
Sbjct: 194 HLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLKK 253

Query: 252 RRKEAFFSELGKPTLSATNSNAKLN----------------------------------- 298
           RRKEAF SELGK        +A+ N                                   
Sbjct: 254 RRKEAFLSELGKTKTDTKPFDARRNKLVFCLDLAPIESHEKNHLMSESKLVFCLELASIE 313

[Close]

BLAST of PI0017476 vs. TAIR 10
Match: AT5G48240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 242.3 bits (617), Expect = 5.4e-64
Identity = 142/252 (56.35%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 12  RGAKRRK---KMGSR--NNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD-NDDDD 71
           RG+++R+   K G++   NK+ +    + ++ K+  K +KLFQKRAR+YNSDDD  +DD+
Sbjct: 14  RGSRKRRVGVKKGTKAARNKKQKSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDEEEDDE 73

Query: 72  GEKAPTVKNESKIL----MRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGI 131
            +K P V    KI     M  + EE+G+E+  E              S+ +++GEI+ GI
Sbjct: 74  SKKQPEVTIREKIFSDANMGPNYEEIGEEDNDEN-------------SDGEDHGEIESGI 133

Query: 132 TKF-TEGCRAFRAAFMSILKKSISDETLGPILSANKKLVAEKLAEEEAERKFKGEARKAK 191
           TKF T+GC AF+ AF +I+KK+  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+ARKAK
Sbjct: 134 TKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAK 193

Query: 192 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 251
            L+ EKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + K
Sbjct: 194 HLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLKK 252

Query: 252 RRKEAFFSELGK 253
           RRKEAF SELGK
Sbjct: 254 RRKEAFLSELGK 252

The following BLAST results are available for this feature:

BLAST of PI0017476 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T062	2.4e-08	30.82	RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1	[more]
Q5M947	1.0e-06	27.47	RRP15-like protein OS=Rattus norvegicus OX=10116 GN=Rrp15 PE=1 SV=1	[more]
Q7ZV20	3.3e-05	27.46	RRP15-like protein OS=Danio rerio OX=7955 GN=rrp15 PE=2 SV=1	[more]
Q9Y3B9	2.1e-04	29.05	RRP15-like protein OS=Homo sapiens OX=9606 GN=RRP15 PE=1 SV=2	[more]
Q9CYX7	3.6e-04	27.44	RRP15-like protein OS=Mus musculus OX=10090 GN=Rrp15 PE=1 SV=2	[more]

BLAST of PI0017476 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K320	1.4e-163	96.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1	[more]
A0A1S3CFX9	9.8e-162	95.34	RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1	[more]
A0A5D3BX18	1.1e-160	94.72	RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663...	[more]
A0A5A7UXA3	8.9e-155	92.55	RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0...	[more]
A0A6J1ENV8	7.6e-130	82.54	RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435218 PE=3 SV=1	[more]

BLAST of PI0017476 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144556.1	2.8e-163	96.89	RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis...	[more]
XP_008462030.1	2.0e-161	95.34	PREDICTED: RRP15-like protein [Cucumis melo]	[more]
TYK03372.1	2.2e-160	94.72	RRP15-like protein [Cucumis melo var. makuwa]	[more]
KAA0059257.1	1.8e-154	92.55	RRP15-like protein [Cucumis melo var. makuwa]	[more]
XP_038888922.1	3.8e-152	90.37	RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benin...	[more]

BLAST of PI0017476 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48240.1	4.8e-76	55.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.3	4.2e-72	49.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.2	5.4e-64	56.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012459	Ribosomal RNA-processing protein 15	PFAM	PF07890	Rrp15p	coord: 131..250 e-value: 1.6E-19 score: 70.5
IPR012459	Ribosomal RNA-processing protein 15	PANTHER	PTHR13245	RRP15-LIKE PROTEIN	coord: 18..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017476.1	PI0017476.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0030687	preribosome, large subunit precursor