PI0017400 (gene) Melon (PI 482460) v1

Overview
NamePI0017400
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 4581151 .. 4581963 (+)
RNA-Seq ExpressionPI0017400
SyntenyPI0017400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTAAGGATGAGATTAAGGAAGTTCGAAAGGATATATCGACATTAACTTCTATGGTCTGTAAGATGACTGACTCTATGAATAGACACGAATTGGAGCTGTCCCAAATCAAGCAGATGCTCTAGAGTTTGGTTCATGTAAAGTATTTTTTAATGTATATGAGATAAGCGATTGTGTGGGTTTATCTACACAATCGTGTATCCCATATAGAAGATTGTTTACTTTATATACATGATCACTTACATGCATACATTATTTTATACACGATCGTTTACATATATACACAATCGTTTACTAAACATTCATTTTTCTCTATTTATCAGAATCAGACTCAAGGGAATGTTGGTATTCATCATCATGATGATTCTGATCATGACGGTGTGGACAGAGATGTAGACAATCACATGGATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGATCATTGGTGAGGGTCAATTTGTTAATGGGTCACATCCTGAAGCACCGAAAGAAAAATCGCCTCCACATAAAGAGATGTTGGGGGAGGTTAAAGTGGATGGCGATGATGTGGAGTTGCTATTGACTATAACGAAAATGGTTGGAAAGCTGGTGTCGAATAGTGAATCCATAGTAGAAGTTAATGGCTACTCAACAAAGGAACAACATCAACTTCTACTACATGAGCAAGAATCGACACCTATTGTTGAAGATCTTACATTGGTCAGCCAGCCACTTCCACTTTATGAGCAACAACCACAACTAGTGTCAAAGATCTCACATTGGTTAGCCATCAATTTCCAGTACGTGAGGAACAACCTTCGATGA

mRNA sequence

ATGACTAAGGATGAGATTAAGGAAGTTCGAAAGGATATATCGACATTAACTTCTATGAATCAGACTCAAGGGAATGTTGGTATTCATCATCATGATGATTCTGATCATGACGGTGTGGACAGAGATGTAGACAATCACATGGATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGATCATTGGTGAGGGTCAATTTGTTAATGGGTCACATCCTGAAGCACCGAAAGAAAAATCGCCTCCACATAAAGAGATGTTGGGGGAGGTTAAAGTGGATGGCGATGATGTGGAGTTGCTATTGACTATAACGAAAATGGTTGGAAAGCTGGTGTCGAATAGTGAATCCATAGTAGAAGTTAATGGCTACTCAACAAAGGAACAACATCAACTTCTACTACATGAGCAAGAATCGACACCTATTGTTGAAGATCTTACATTGGTCAGCCAGCCACTTCCACTTTATGAGCAACAACCACAACTAGTGTCAAAGATCTCACATTGGTTAGCCATCAATTTCCAGTACGTGAGGAACAACCTTCGATGA

Coding sequence (CDS)

ATGACTAAGGATGAGATTAAGGAAGTTCGAAAGGATATATCGACATTAACTTCTATGAATCAGACTCAAGGGAATGTTGGTATTCATCATCATGATGATTCTGATCATGACGGTGTGGACAGAGATGTAGACAATCACATGGATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGATCATTGGTGAGGGTCAATTTGTTAATGGGTCACATCCTGAAGCACCGAAAGAAAAATCGCCTCCACATAAAGAGATGTTGGGGGAGGTTAAAGTGGATGGCGATGATGTGGAGTTGCTATTGACTATAACGAAAATGGTTGGAAAGCTGGTGTCGAATAGTGAATCCATAGTAGAAGTTAATGGCTACTCAACAAAGGAACAACATCAACTTCTACTACATGAGCAAGAATCGACACCTATTGTTGAAGATCTTACATTGGTCAGCCAGCCACTTCCACTTTATGAGCAACAACCACAACTAGTGTCAAAGATCTCACATTGGTTAGCCATCAATTTCCAGTACGTGAGGAACAACCTTCGATGA

Protein sequence

MTKDEIKEVRKDISTLTSMNQTQGNVGIHHHDDSDHDGVDRDVDNHMDEDPPTQTQEEHMIIGEGQFVNGSHPEAPKEKSPPHKEMLGEVKVDGDDVELLLTITKMVGKLVSNSESIVEVNGYSTKEQHQLLLHEQESTPIVEDLTLVSQPLPLYEQQPQLVSKISHWLAINFQYVRNNLR
Homology
[Close]
BLAST of PI0017400 vs. ExPASy TrEMBL
Match: A0A5A7TSL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006310 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.1e-16
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 0 

Query: 28  IHHHDDSDHDGVDRDVDNHMDEDPPTQTQEEHMIIGEGQFVNGSHPEAPKEKSPPHKEML 87
           I +  D+   G D+D DNHMDEDPPT+TQEE++IIG+GQ V GS+PEAPKE  PPHKEML
Sbjct: 48  ISNQADALEFGSDKDKDNHMDEDPPTKTQEEYVIIGKGQSVIGSYPEAPKETLPPHKEML 107

Query: 88  GEVKVDGDD 97
           GEV+VDGDD
Sbjct: 108 GEVEVDGDD 116

[Close]
BLAST of PI0017400 vs. ExPASy TrEMBL
Match: A0A0A0LYJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G177730 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.6e-04
Identity = 34/77 (44.16%), Postives = 42/77 (54.55%), Query Frame = 0 

Query: 83  HKEMLGEVKVDGDDVELLLTITKMVGKLVSNSESIVEVNGYSTKEQHQLLLHEQESTPIV 142
           H E   +V+VDG D ELLL +++MV KL+  SE++                   ES  IV
Sbjct: 13  HLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENV------------------DESATIV 71

Query: 143 EDLTLVSQPLPLYEQQP 160
           EDLT V QPLP  EQQP
Sbjct: 73  EDLTFVCQPLPFCEQQP 71

[Close]
BLAST of PI0017400 vs. NCBI nr
Match: KAA0046054.1 (hypothetical protein E6C27_scaffold243G006310 [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 8.5e-16
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 0 

Query: 28  IHHHDDSDHDGVDRDVDNHMDEDPPTQTQEEHMIIGEGQFVNGSHPEAPKEKSPPHKEML 87
           I +  D+   G D+D DNHMDEDPPT+TQEE++IIG+GQ V GS+PEAPKE  PPHKEML
Sbjct: 48  ISNQADALEFGSDKDKDNHMDEDPPTKTQEEYVIIGKGQSVIGSYPEAPKETLPPHKEML 107

Query: 88  GEVKVDGDD 97
           GEV+VDGDD
Sbjct: 108 GEVEVDGDD 116

[Close]
BLAST of PI0017400 vs. NCBI nr
Match: KGN65006.1 (hypothetical protein Csa_022784 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 7.4e-04
Identity = 34/77 (44.16%), Postives = 42/77 (54.55%), Query Frame = 0 

Query: 83  HKEMLGEVKVDGDDVELLLTITKMVGKLVSNSESIVEVNGYSTKEQHQLLLHEQESTPIV 142
           H E   +V+VDG D ELLL +++MV KL+  SE++                   ES  IV
Sbjct: 13  HLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENV------------------DESATIV 71

Query: 143 EDLTLVSQPLPLYEQQP 160
           EDLT V QPLP  EQQP
Sbjct: 73  EDLTFVCQPLPFCEQQP 71

The following BLAST results are available for this feature:
BLAST of PI0017400 vs.
Match NameE-valueIdentityDescription
BLAST of PI0017400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TSL74.1e-1669.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LYJ43.6e-0444.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G177730 PE=4 SV=1[more]
BLAST of PI0017400 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0046054.18.5e-1669.57hypothetical protein E6C27_scaffold243G006310 [Cucumis melo var. makuwa][more]
KGN65006.17.4e-0444.16hypothetical protein Csa_022784 [Cucumis sativus][more]
BLAST of PI0017400 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017400.1PI0017400.1mRNA