PI0017362 (gene) Melon (PI 482460) v1

Overview
NamePI0017362
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTransposase
Locationchr11: 18334470 .. 18335727 (-)
RNA-Seq ExpressionPI0017362
SyntenyPI0017362
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAATGTTACACGTGTTAGAAGTGAAGGTGAGAGGAAGGTGGTGGAATACAATGAAGATGGAGTACCCATTGAAGAAAATGGGACAAAACTAAACTCTTTCATTTGGTTGTGTGTACACTACCACATCTCCATTAACTATGCATCATGGAGAGAAGTGCATGTTAAATTGAAGGACAAAATCTATAACATAGTTGAGGTAAGTTTTCTTATATTTTTTGTACAAGTTTATCGATTGACTATATATAACTAACTATCCAATCTCAGGCTGCATTTACAATCGACAGTAGATCTACGAAGGGCGTTCTTAAGACTATAGGGACGACATTCCGTTAATTTAGGCATTGGTTGACGACGAGCCATATCTTGCCATTCAAGAATGAACCTGAACTTTTGAGACGACCACCAGATATGTATTCCTACATTAACCAAAAACAGTAGGAAGATTTCGTTAGATCTAGACTTTGTCCACATTTTGAGGTATCAATGAATTTCTTTATATTTTAGGTTTCAAATATTTGTTAAGAAACTTTATAAAACCCCAATACAATGTTATATTTGTGTAGAACAAAAGAAAACTTCAACAAGAGAGACGGAAGAAGAACAAGTATAGCCATCGACTTTCAAGAAAAGGTTATGCTAATCTACGAGAGGAATTGGTAAGAATTAGTTTATGTTTGCTTTAGTCTTAAAAACTTCTTAATCAATCTAATTTTTTGTATACGTTGAAATGTAGAAAAATACACCTTCAGAAGAAAGTGATTTTGATCGACCTAGCATGTGGAAGAAGACTAGTGTAGATAAAAAGAGACAATACGACAATGAACACGTCCAAGAAGTTGTGAATCGTATAGTAAGACACACATTACAATTTTACATTCTTTAAAGTTTTAAAGTTTTATGAAATTGAGTTATATTTTTTTGCATTTTAGGATGAAATCTCAAAGACTTGTGTTGACAAAGAGTCATCTCTAAACAATGTTTTGACATAAACTTTGGGTACACAAGAGTGTAGTGGACGTGTACGTGGTGTTGGCGGGTTTGCCACCCAAACTGCTTACTTCCACATAGCGAAACGCTAAAAGAAACGGAGTGAAGAAATTGAGAAGCTTAGTCAAGAGAATGAAAAGCGTTGTTTGCGACTTAAAGAATTAGAGGATATTCACATATCAACACAATCTAAACCGACATCTGCACATGGATCTTGCTCAAGACCAAGATTGGAATATGAGATTCAATGTAAAAAAAAAAACTGA

mRNA sequence

ATGTCTAATGTTACACGTGTTAGAAGTGAAGGTGAGAGGAAGGTGGTGGAATACAATGAAGATGGAGTACCCATTGAAGAAAATGGGACAAAACTAAACTCTTTCATTTGGTTGTGTGTACACTACCACATCTCCATTAACTATGCATCATGGAGAGAAGTGCATGTTAAATTGAAGGACAAAATCTATAACATAGTTGAGAACAAAAGAAAACTTCAACAAGAGAGACGGAAGAAGAACAAGTATAGCCATCGACTTTCAAGAAAAGGTTATGCTAATCTACGAGAGGAATTGGATGAAATCTCAAAGACTTGTGTTGACAAAGAGTCATCTCTAAACAATTGTAGTGGACGTGTACGTGGTGTTGGCGGGTTTGCCACCCAAACTAAACGGAGTGAAGAAATTGAGAAGCTTAGTCAAGAGAATGAAAAGCGTTGTTTGCGACTTAAAGAATTAGAGGATATTCACATATCAACACAATCTAAACCGACATCTGCACATGGATCTTGCTCAAGACCAAGATTGGAATATGAGATTCAATGTAAAAAAAAAAACTGA

Coding sequence (CDS)

ATGTCTAATGTTACACGTGTTAGAAGTGAAGGTGAGAGGAAGGTGGTGGAATACAATGAAGATGGAGTACCCATTGAAGAAAATGGGACAAAACTAAACTCTTTCATTTGGTTGTGTGTACACTACCACATCTCCATTAACTATGCATCATGGAGAGAAGTGCATGTTAAATTGAAGGACAAAATCTATAACATAGTTGAGAACAAAAGAAAACTTCAACAAGAGAGACGGAAGAAGAACAAGTATAGCCATCGACTTTCAAGAAAAGGTTATGCTAATCTACGAGAGGAATTGGATGAAATCTCAAAGACTTGTGTTGACAAAGAGTCATCTCTAAACAATTGTAGTGGACGTGTACGTGGTGTTGGCGGGTTTGCCACCCAAACTAAACGGAGTGAAGAAATTGAGAAGCTTAGTCAAGAGAATGAAAAGCGTTGTTTGCGACTTAAAGAATTAGAGGATATTCACATATCAACACAATCTAAACCGACATCTGCACATGGATCTTGCTCAAGACCAAGATTGGAATATGAGATTCAATGTAAAAAAAAAAACTGA

Protein sequence

MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVENKRKLQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYEIQCKKKN
Homology
BLAST of PI0017362 vs. ExPASy TrEMBL
Match: A0A5D3E359 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00260 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.8e-51
Identity = 142/305 (46.56%), Postives = 160/305 (52.46%), Query Frame = 0

Query: 1   MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKD 60
           M +VTRVRS+GERK+VEYNEDGVPI ENG KLNSFI  CVHYHI I YA+W +V V+ K+
Sbjct: 279 MFDVTRVRSKGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPVEFKE 338

Query: 61  KIYNIV------------------------------------------------------ 120
           KIY  V                                                      
Sbjct: 339 KIYTTVETAFIINSRSSKSILKTAETTFRQFKHWLTKKYILPFKNEPELLKRPPYMYSYI 398

Query: 121 -----------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL----------- 180
                            E+KRKLQQERRKKNKY+HRLSRKGYANLREEL           
Sbjct: 399 DQKQWEEFVRSRLCPHFEDKRKLQQERRKKNKYNHRLSRKGYANLREELKNIPSEESELD 458

Query: 181 --------------------DEISKTCVDKESSLNN----------CSGRVRGVGGFATQ 184
                               DEISKTC DKE S N+           S RVRGVGGF T 
Sbjct: 459 RASMWKKDRVDKKGQYDNEDDEISKTCADKEPSPNDVLTQALGTRESSWRVRGVGGFVTP 518

BLAST of PI0017362 vs. ExPASy TrEMBL
Match: A0A5A7VG24 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00090 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49
Identity = 134/282 (47.52%), Postives = 152/282 (53.90%), Query Frame = 0

Query: 1   MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKD 60
           M +VTRVRSEGERK+VEYNEDGVPI ENG KLNSFI  CVHY+I I YA+W +V  +LK+
Sbjct: 316 MFDVTRVRSEGERKLVEYNEDGVPIGENGAKLNSFIGSCVHYYIPIIYATWIDVPAELKE 375

Query: 61  KIYNIV------------------------------------------------------ 120
           KIY IV                                                      
Sbjct: 376 KIYTIVESILKTAGTTFRQFKHWLTKKYILPFKNEPELLKRPPYMYSYIDQKQWEEFVRS 435

Query: 121 ------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL---------------------- 180
                 E+KRKLQQERRKKNKY+HRLSRKGYANLREEL                      
Sbjct: 436 RLCPHFEDKRKLQQERRKKNKYNHRLSRKGYANLREELKNIPSKESELDRASMWKKTRVD 495

Query: 181 -----------------DEISKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQE 184
                            DEISKTC DKE S N+   +           KR+EEI+KLS+E
Sbjct: 496 KKGQYDNEDIQEVVNRIDEISKTCADKEPSPNDVLTQALA----KRSKKRNEEIDKLSEE 555

BLAST of PI0017362 vs. ExPASy TrEMBL
Match: A0A5A7U006 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001620 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.6e-47
Identity = 122/222 (54.95%), Postives = 142/222 (63.96%), Query Frame = 0

Query: 6   RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNI 65
           R R EGERK+VEYNEDGVPI ENGTKLNSFI  CV+YHI I YA+W +V  +LK+KIY I
Sbjct: 553 RSRQEGERKLVEYNEDGVPIGENGTKLNSFIGSCVYYHIPIIYATWIDVPAELKEKIYTI 612

Query: 66  VEN----------------------------------KRKLQQERRKKNKYSHRLSRKGY 125
           V+N                                  KRKLQQERRK NKY+HRLSRK Y
Sbjct: 613 VQNEPELLKRPPYMYSYIDQKQWEEFVRSRLCPHFEEKRKLQQERRKNNKYNHRLSRKDY 672

Query: 126 ANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQE 184
           ANLREEL    K    +ES L+  S     RV   G +  +       + +EEI+KLS+E
Sbjct: 673 ANLREEL----KNIPSEESELDRASMWKKARVDKKGQYNNEDVQEVVNRINEEIDKLSEE 732

BLAST of PI0017362 vs. ExPASy TrEMBL
Match: A0A5D3DS40 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00680 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.0e-46
Identity = 121/222 (54.50%), Postives = 141/222 (63.51%), Query Frame = 0

Query: 6   RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNI 65
           R R  GERK+VEYNEDGVPI ENGTKLNSFI  CV+YHI I YA+W +V  +LK+KIY I
Sbjct: 553 RSRQGGERKLVEYNEDGVPIGENGTKLNSFIGSCVYYHIPIIYATWIDVPAELKEKIYTI 612

Query: 66  VEN----------------------------------KRKLQQERRKKNKYSHRLSRKGY 125
           V+N                                  KRKLQQERRK NKY+HRLSRK Y
Sbjct: 613 VQNEPELLKRPPYMYSYIDQKQWEEFVRSRLCPHFEEKRKLQQERRKNNKYNHRLSRKDY 672

Query: 126 ANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQE 184
           ANLREEL    K    +ES L+  S     RV   G +  +       + +EEI+KLS+E
Sbjct: 673 ANLREEL----KNIPSEESELDRASMWKKARVDKKGQYNNEDVQEVVNRINEEIDKLSEE 732

BLAST of PI0017362 vs. ExPASy TrEMBL
Match: A0A5D3DCP7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00210 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 9.9e-42
Identity = 110/191 (57.59%), Postives = 136/191 (71.20%), Query Frame = 0

Query: 1   MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKD 60
           M + TRVRSE ERK+VEYN DGVPI ENG KLNSFI  CVHYHISI YA+W +V  +LK+
Sbjct: 518 MFDATRVRSECERKLVEYNGDGVPIGENGAKLNSFIGSCVHYHISIIYATWIDVPAELKE 577

Query: 61  KIYNIVENKRKLQQERRKKNKYS----HRLSRKG-YAN--LREELD-EISKTCVDKESSL 120
           KIY IVE  + +  E  + ++ S     R+ +KG Y N  ++E ++ EISKTC DKE S 
Sbjct: 578 KIYTIVE--KNIPSEESELDRASMWKKARVDKKGQYDNEDVQEVVNHEISKTCADKEPSP 637

Query: 121 NNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSR 180
           NN   +           KR+EEI+KLS+ENEK  LR++ELE+IHISTQS PT AHGSCSR
Sbjct: 638 NNVLTQALA----KRSKKRNEEIDKLSEENEKLRLRVQELENIHISTQSTPTFAHGSCSR 697

Query: 181 PRLEYEIQCKK 184
           PRLEY+IQCK+
Sbjct: 698 PRLEYDIQCKR 702

BLAST of PI0017362 vs. NCBI nr
Match: TYK30021.1 (hypothetical protein E5676_scaffold587G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 3.7e-51
Identity = 142/305 (46.56%), Postives = 160/305 (52.46%), Query Frame = 0

Query: 1   MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKD 60
           M +VTRVRS+GERK+VEYNEDGVPI ENG KLNSFI  CVHYHI I YA+W +V V+ K+
Sbjct: 279 MFDVTRVRSKGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPVEFKE 338

Query: 61  KIYNIV------------------------------------------------------ 120
           KIY  V                                                      
Sbjct: 339 KIYTTVETAFIINSRSSKSILKTAETTFRQFKHWLTKKYILPFKNEPELLKRPPYMYSYI 398

Query: 121 -----------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL----------- 180
                            E+KRKLQQERRKKNKY+HRLSRKGYANLREEL           
Sbjct: 399 DQKQWEEFVRSRLCPHFEDKRKLQQERRKKNKYNHRLSRKGYANLREELKNIPSEESELD 458

Query: 181 --------------------DEISKTCVDKESSLNN----------CSGRVRGVGGFATQ 184
                               DEISKTC DKE S N+           S RVRGVGGF T 
Sbjct: 459 RASMWKKDRVDKKGQYDNEDDEISKTCADKEPSPNDVLTQALGTRESSWRVRGVGGFVTP 518

BLAST of PI0017362 vs. NCBI nr
Match: KAA0066037.1 (hypothetical protein E6C27_scaffold21G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 205.3 bits (521), Expect = 4.6e-49
Identity = 134/282 (47.52%), Postives = 152/282 (53.90%), Query Frame = 0

Query: 1   MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKD 60
           M +VTRVRSEGERK+VEYNEDGVPI ENG KLNSFI  CVHY+I I YA+W +V  +LK+
Sbjct: 316 MFDVTRVRSEGERKLVEYNEDGVPIGENGAKLNSFIGSCVHYYIPIIYATWIDVPAELKE 375

Query: 61  KIYNIV------------------------------------------------------ 120
           KIY IV                                                      
Sbjct: 376 KIYTIVESILKTAGTTFRQFKHWLTKKYILPFKNEPELLKRPPYMYSYIDQKQWEEFVRS 435

Query: 121 ------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL---------------------- 180
                 E+KRKLQQERRKKNKY+HRLSRKGYANLREEL                      
Sbjct: 436 RLCPHFEDKRKLQQERRKKNKYNHRLSRKGYANLREELKNIPSKESELDRASMWKKTRVD 495

Query: 181 -----------------DEISKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQE 184
                            DEISKTC DKE S N+   +           KR+EEI+KLS+E
Sbjct: 496 KKGQYDNEDIQEVVNRIDEISKTCADKEPSPNDVLTQALA----KRSKKRNEEIDKLSEE 555

BLAST of PI0017362 vs. NCBI nr
Match: KAA0047527.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-47
Identity = 122/222 (54.95%), Postives = 142/222 (63.96%), Query Frame = 0

Query: 6   RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNI 65
           R R EGERK+VEYNEDGVPI ENGTKLNSFI  CV+YHI I YA+W +V  +LK+KIY I
Sbjct: 553 RSRQEGERKLVEYNEDGVPIGENGTKLNSFIGSCVYYHIPIIYATWIDVPAELKEKIYTI 612

Query: 66  VEN----------------------------------KRKLQQERRKKNKYSHRLSRKGY 125
           V+N                                  KRKLQQERRK NKY+HRLSRK Y
Sbjct: 613 VQNEPELLKRPPYMYSYIDQKQWEEFVRSRLCPHFEEKRKLQQERRKNNKYNHRLSRKDY 672

Query: 126 ANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQE 184
           ANLREEL    K    +ES L+  S     RV   G +  +       + +EEI+KLS+E
Sbjct: 673 ANLREEL----KNIPSEESELDRASMWKKARVDKKGQYNNEDVQEVVNRINEEIDKLSEE 732

BLAST of PI0017362 vs. NCBI nr
Match: KAA0054128.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 4.3e-47
Identity = 127/261 (48.66%), Postives = 146/261 (55.94%), Query Frame = 0

Query: 6   RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNI 65
           R R  GERK+VEYNEDGVPI ENG KLNSFI  CVHYHI I YA+W +V  +LK+KIY I
Sbjct: 345 RSRQGGERKLVEYNEDGVPIGENGAKLNSFIESCVHYHIPIIYATWIDVPAELKEKIYTI 404

Query: 66  VEN--------------------------------------------------------- 125
           VE                                                          
Sbjct: 405 VEAAFIIDNRSRKSILKTAGTTFRQFKHWLRKKYILPFENEPKLLKRPPYMYSYIDQKQW 464

Query: 126 --------------KRKLQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNN 176
                         KRKLQQERRKKNKY+HRLSRKGYANLREEL++ISKTC DKE S N+
Sbjct: 465 EEFVRSRLCPHFEVKRKLQQERRKKNKYNHRLSRKGYANLREELNDISKTCADKEPSPND 524

BLAST of PI0017362 vs. NCBI nr
Match: TYK26496.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 2.1e-46
Identity = 121/222 (54.50%), Postives = 141/222 (63.51%), Query Frame = 0

Query: 6   RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNI 65
           R R  GERK+VEYNEDGVPI ENGTKLNSFI  CV+YHI I YA+W +V  +LK+KIY I
Sbjct: 553 RSRQGGERKLVEYNEDGVPIGENGTKLNSFIGSCVYYHIPIIYATWIDVPAELKEKIYTI 612

Query: 66  VEN----------------------------------KRKLQQERRKKNKYSHRLSRKGY 125
           V+N                                  KRKLQQERRK NKY+HRLSRK Y
Sbjct: 613 VQNEPELLKRPPYMYSYIDQKQWEEFVRSRLCPHFEEKRKLQQERRKNNKYNHRLSRKDY 672

Query: 126 ANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQE 184
           ANLREEL    K    +ES L+  S     RV   G +  +       + +EEI+KLS+E
Sbjct: 673 ANLREEL----KNIPSEESELDRASMWKKARVDKKGQYNNEDVQEVVNRINEEIDKLSEE 732

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E3591.8e-5146.56Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VG242.2e-4947.52DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7U0061.6e-4754.95Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001620 P... [more]
A0A5D3DS401.0e-4654.50Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00680 PE... [more]
A0A5D3DCP79.9e-4257.59Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00210 PE... [more]
Match NameE-valueIdentityDescription
TYK30021.13.7e-5146.56hypothetical protein E5676_scaffold587G00260 [Cucumis melo var. makuwa][more]
KAA0066037.14.6e-4947.52hypothetical protein E6C27_scaffold21G00090 [Cucumis melo var. makuwa][more]
KAA0047527.13.3e-4754.95transposase [Cucumis melo var. makuwa][more]
KAA0054128.14.3e-4748.66pol protein [Cucumis melo var. makuwa][more]
TYK26496.12.1e-4654.50transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availableCOILSCoilCoilcoord: 135..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017362.1PI0017362.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity