PI0017351 (gene) Melon (PI 482460) v1

Overview


Name	PI0017351
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr10: 17978569 .. 17981425 (+)
RNA-Seq Expression	PI0017351
Synteny	PI0017351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACCTTTTTTTCCTTTCCAAATCTTATTCCTTAGGATCAAAGCATAAAAAAAAGTTCAACAATTTTATAAATCAATTAATGATTAGTAGGTGAAATTTAATTTCTATCGTCTTTAGATTTGATAAAGTTGATAAAATTTTGTGCCAAACCCATCCTTTTGATTTGGTAAATTAACCAACATAGGCCATGAACTTATAGCATTAGGACAGCATCATAATTCATCAATTAGCCCAACTAATCATAAATTAATTAAGTGGACACAATTCTTTTTCACTAAAAATAAAAAAATGAAAATAACTAAAATAATAATTCTACTTTTCAATAATGGAAGGCAGAAAAATATATATAATATGAGTTAGGAAAAAAATTATTCTTATTTGTTTATTTATTTATTAAAAAAAATAAAGGCTTCACAAGCAATAAAGGAATATGTTTTGGATGGATAAGAATGAAAAAAATCAAAGCTTTATCAAAAAGGAAAAAAAAAATTGTTTGAAGCCATCCTCCAACAAACTCATAATGAACTCTACCATTCATTCATCTTCTTCTTCATCATCATCATCATCATCATCATCATATTTCAGCTGAAACTTGTTCTTTCTTGTATGAAAGTTTTTTCCCGACCACAAAGGCTGAGCAAAGGTTTAATTTCACTGCCACCCGCCATTGACTAAAGGACAAAGCTCCTAAAAGCTAGAGAGAAAAAAAAGAGCTTCTTTTTGGGTTTTCGAAAGTGGATTTGGGGCTTACCTTCTCCATTTTTCAGTCTCTTATTTTGTTGGGGATTTTGGGTTATAGGTTTTTAAGCTAGGGTTTCTTCTTTCGCCATACCCCATTAAGAAAACCAGCTCCACGCTTTGGTTTTCTTGCTTTTTCTCTCTTGTTTTCATCGGTTTCTTGCAGAGGAGGGAAGAGAATCTTTCAGATTATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTCTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGTGAGTTTTCCCTTTTAATTATATGTTAAGTACTTTTCTTAATTTTCTCCTTTTCAATCGTGATGATCGACATCTTAGTTTTGTTTTTGTCTGGAAGTGATTGTAAGGGTAGTAGTTTGGTTTTTCCCAAAATAGAAAGAAATAAATTGTTGTTTGTTGGGGTTTCGATGATGTTCTTCTTAGATATCTGATTGATTTTTTTGGTCTTTTAGGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTCTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTAAACCTCTTCCACATACTTGTATACAAGGTCTGTTGGTTTTTTGTAGTTGTAGACGATTGATGATTATATGAAGTTTCTTTCAACTGCAACAGTATCGGTATGGTTGTGGTATCTTATTGTTGATCTTTGTATCAATTCAGGTATATCCGGAGGGGAAACAAAAACGAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGGTACTGACTTATTAAGTTTGTTAGCTAACGATTTGTCCTTTTTTAGTAGTTTTGTGTTTTCTGATATTGTGTGTTTCCTCATGTTTTGAATTCCAGCTATAATATTGCCTTCGCTTCAGAGAATCCACGGTAGCTTGGATAAGTTGGACGATTGCAAGGAAGGGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGGTGATAAAGATGGTAGACTCATGAACATCGATATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGCTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGTAAAAACAAGTCTTATTAAGCATCTTCATGGTCTATGAAGCACTTTGTAGTAACCTCTGTGCTCAATTGTTATTTCTTCCTACATTACAGGAACACCAGGTCAGAATCCTGTCCATTTTGTCGTGGCAGCTTGAAGAGGGTCAACTCAGAGGACTTATGGGTGCTCACGTGCAGCGATGATGTGGTTGATACTGAAACCGTTTCGAAGGAGGACATGTTGCAATTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCGTAGTATATTCCGAATATCTAATTTAGTTCAGGCATCAGAGTAAACTGTATAGAGGGAAAATCCCAACGCAAAATGTAAAGGTCAGAACATATCCTCTCTGCTTCATATAGAATCATTGATCACATGACATGCTTAGCTAGAACTAATAATGAATCAATGTAAGATGCCAATCATCTCCGCATCTCGGCTCGTGTATCTTACAAACTTGAAAGTGCCTTTTCTAATGCACTGATTGTCAATAAAGATGAATTTGGTCTCTGATGGTTTATATCATATGTTTTGTTGGCATGGATGGGATGGTTCTGTTCTGATCTTAAAAAATCTTAACATTCACTTTGTAATTCGTGGGGTCTTCTCTAAAACTTCAACTCTCCGAGCTTATCGTGTGTTGTCGATCATAGGATATAAGTCCTGTTTTTTTGTGTGGGGTTGTAATTATATCATCAACAAGATAACTTGTGATCAATAATCATGGTTAGCCAAAGTACAATAATTTGAAAGAAAGTAATCTTCTGTCTGAAGGAATTGAAAATGATTGAAAGTCCACTTTGAAAGCAATGCTCATTGCAGAAAACAGACTAAGATAGAGAAAATTGCAGAGATATTTCTTTGCTAAAGCGAATTTGGCTTAGTGGTAATGGTGTGATCTCTATCCTTAGGAGTTGGTGGTTCAATTCCCC

mRNA sequence

GAACCTTTTTTTCCTTTCCAAATCTTATTCCTTAGGATCAAAGCATAAAAAAAAGTTCAACAATTTTATAAATCAATTAATGATTAGTAGGTGAAATTTAATTTCTATCGTCTTTAGATTTGATAAAGTTGATAAAATTTTGTGCCAAACCCATCCTTTTGATTTGGTAAATTAACCAACATAGGCCATGAACTTATAGCATTAGGACAGCATCATAATTCATCAATTAGCCCAACTAATCATAAATTAATTAAGTGGACACAATTCTTTTTCACTAAAAATAAAAAAATGAAAATAACTAAAATAATAATTCTACTTTTCAATAATGGAAGGCAGAAAAATATATATAATATGAGTTAGGAAAAAAATTATTCTTATTTGTTTATTTATTTATTAAAAAAAATAAAGGCTTCACAAGCAATAAAGGAATATGTTTTGGATGGATAAGAATGAAAAAAATCAAAGCTTTATCAAAAAGGAAAAAAAAAATTGTTTGAAGCCATCCTCCAACAAACTCATAATGAACTCTACCATTCATTCATCTTCTTCTTCATCATCATCATCATCATCATCATCATATTTCAGCTGAAACTTGTTCTTTCTTGTATGAAAGTTTTTTCCCGACCACAAAGGCTGAGCAAAGGTTTAATTTCACTGCCACCCGCCATTGACTAAAGGACAAAGCTCCTAAAAGCTAGAGAGAAAAAAAAGAGCTTCTTTTTGGGTTTTCGAAAGTGGATTTGGGGCTTACCTTCTCCATTTTTCAGTCTCTTATTTTGTTGGGGATTTTGGGTTATAGGTTTTTAAGCTAGGGTTTCTTCTTTCGCCATACCCCATTAAGAAAACCAGCTCCACGCTTTGGTTTTCTTGCTTTTTCTCTCTTGTTTTCATCGGTTTCTTGCAGAGGAGGGAAGAGAATCTTTCAGATTATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTCTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTCTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTAAACCTCTTCCACATACTTGTATACAAGGTATATCCGGAGGGGAAACAAAAACGAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGCTATAATATTGCCTTCGCTTCAGAGAATCCACGGTAGCTTGGATAAGTTGGACGATTGCAAGGAAGGGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGGTGATAAAGATGGTAGACTCATGAACATCGATATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGCTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGAACACCAGGTCAGAATCCTGTCCATTTTGTCGTGGCAGCTTGAAGAGGGTCAACTCAGAGGACTTATGGGTGCTCACGTGCAGCGATGATGTGGTTGATACTGAAACCGTTTCGAAGGAGGACATGTTGCAATTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCGTAGTATATTCCGAATATCTAATTTAGTTCAGGCATCAGAGTAAACTGTATAGAGGGAAAATCCCAACGCAAAATGTAAAGGTCAGAACATATCCTCTCTGCTTCATATAGAATCATTGATCACATGACATGCTTAGCTAGAACTAATAATGAATCAATGTAAGATGCCAATCATCTCCGCATCTCGGCTCGTGTATCTTACAAACTTGAAAGTGCCTTTTCTAATGCACTGATTGTCAATAAAGATGAATTTGGTCTCTGATGGTTTATATCATATGTTTTGTTGGCATGGATGGGATGGTTCTGTTCTGATCTTAAAAAATCTTAACATTCACTTTGTAATTCGTGGGGTCTTCTCTAAAACTTCAACTCTCCGAGCTTATCGTGTGTTGTCGATCATAGGATATAAGTCCTGTTTTTTTGTGTGGGGTTGTAATTATATCATCAACAAGATAACTTGTGATCAATAATCATGGTTAGCCAAAGTACAATAATTTGAAAGAAAGTAATCTTCTGTCTGAAGGAATTGAAAATGATTGAAAGTCCACTTTGAAAGCAATGCTCATTGCAGAAAACAGACTAAGATAGAGAAAATTGCAGAGATATTTCTTTGCTAAAGCGAATTTGGCTTAGTGGTAATGGTGTGATCTCTATCCTTAGGAGTTGGTGGTTCAATTCCCC

Coding sequence (CDS)

ATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTCTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTCTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTAAACCTCTTCCACATACTTGTATACAAGGTATATCCGGAGGGGAAACAAAAACGAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGCTATAATATTGCCTTCGCTTCAGAGAATCCACGGTAGCTTGGATAAGTTGGACGATTGCAAGGAAGGGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGGTGATAAAGATGGTAGACTCATGAACATCGATATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGCTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGAACACCAGGTCAGAATCCTGTCCATTTTGTCGTGGCAGCTTGAAGAGGGTCAACTCAGAGGACTTATGGGTGCTCACGTGCAGCGATGATGTGGTTGATACTGAAACCGTTTCGAAGGAGGACATGTTGCAATTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCGTAGTATATTCCGAATATCTAATTTAG

Protein sequence

MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFVVYSEYLI

Homology

[Close]

BLAST of PI0017351 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.2e-57
Identity = 114/241 (47.30%), Postives = 154/241 (63.90%), Query Frame = 0


Query: 9   SHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLL 68
           S +DSL+ LEADIQ+AN+LA+  P    G Y+QM+L Y+  A + LFLLQW DC      
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 69  PRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEG 128
              L L  IL+YK Y +G  K  +S H RK +IR+FY ++ PSL ++HG +  +++ K+ 
Sbjct: 64  AGALGLLRILIYKAYVDG--KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 129 HHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTRS 188
               +   KK     G++  ID++RE+ECGICLE   K+VLP C HSMCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 189 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFVVY 248
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE++ +   YI+ LP    D   V Y
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 238

Query: 249 S 250
           +
Sbjct: 244 A 238

[Close]

BLAST of PI0017351 vs. ExPASy Swiss-Prot
Match: Q4VBT5 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.3e-04
Identity = 24/76 (31.58%), Postives = 35/76 (46.05%), Query Frame = 0


Query: 149 IDMKREDECGICLE-------PCTKM--VLPNCCHSMCIKCYRNWNTRSE-------SCP 208
           I   ++  CG+C+E       P  +   +L NCCH  C+KC R W +  +       SCP
Sbjct: 228 IQRSKDMMCGVCMEVVFEKTNPSERRFGILSNCCHCYCLKCIRKWRSAKQFESKIIKSCP 287

[Close]

BLAST of PI0017351 vs. ExPASy TrEMBL
Match: A0A5D3CUV6 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001890 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.0e-146
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKVYPEGKQK+NISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKEGHHWIEMSSKKRGDKDGRL NIDMKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF+VYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

[Close]

BLAST of PI0017351 vs. ExPASy TrEMBL
Match: A0A1S3BE96 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo OX=3656 GN=LOC103488929 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.0e-146
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKVYPEGKQK+NISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKEGHHWIEMSSKKRGDKDGRL NIDMKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF+VYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

[Close]

BLAST of PI0017351 vs. ExPASy TrEMBL
Match: A0A0A0KPZ5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591750 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.1e-143
Identity = 246/253 (97.23%), Postives = 250/253 (98.81%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKV+PEGKQK+NISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKE HHWIEMSSKKR DKDGRL NI+MKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF+VYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

[Close]

BLAST of PI0017351 vs. ExPASy TrEMBL
Match: A0A6J1GXA6 (RING-H2 finger protein ATL47-like OS=Cucurbita moschata OX=3662 GN=LOC111458273 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 237/253 (93.68%), Postives = 241/253 (95.26%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPM KGG YLQMKLVYNHLAPI LFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYL+LFHILVYKV+PEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDD +E H WIEM S KRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKEDML F RYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF VYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of PI0017351 vs. ExPASy TrEMBL
Match: A0A6J1K860 (RING-H2 finger protein ATL47-like OS=Cucurbita maxima OX=3661 GN=LOC111493108 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.2e-136
Identity = 236/253 (93.28%), Postives = 241/253 (95.26%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPM KGG YLQMKLVYNHLAPI LFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYL+LFHILVYKV+PEGKQKRNISRHGRKATIRDFYAIILPSLQ+IHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQQIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDD +E H WIEM SKKRGDKDGRLMNIDMKREDECGICLE CTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSKKRGDKDGRLMNIDMKREDECGICLEQCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKEDML F RYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF VYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of PI0017351 vs. NCBI nr
Match: XP_008446102.1 (PREDICTED: E3 ubiquitin-protein ligase RNF8-B [Cucumis melo] >KAA0034229.1 E3 ubiquitin-protein ligase RNF8-B [Cucumis melo var. makuwa] >TYK15691.1 E3 ubiquitin-protein ligase RNF8-B [Cucumis melo var. makuwa])

HSP 1 Score: 528.1 bits (1359), Expect = 4.2e-146
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKVYPEGKQK+NISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKEGHHWIEMSSKKRGDKDGRL NIDMKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF+VYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

[Close]

BLAST of PI0017351 vs. NCBI nr
Match: XP_038893224.1 (E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida] >XP_038893225.1 E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida])

HSP 1 Score: 527.7 bits (1358), Expect = 5.5e-146
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ET+SKEDML+FHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETLSKEDMLRFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALFVVYSEYLI
Sbjct: 241 PDALFVVYSEYLI 253

[Close]

BLAST of PI0017351 vs. NCBI nr
Match: XP_004135295.1 (E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN51710.1 hypothetical protein Csa_007993 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 4.3e-143
Identity = 246/253 (97.23%), Postives = 250/253 (98.81%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKV+PEGKQK+NISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKE HHWIEMSSKKR DKDGRL NI+MKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF+VYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

[Close]

BLAST of PI0017351 vs. NCBI nr
Match: XP_022956578.1 (RING-H2 finger protein ATL47-like [Cucurbita moschata])

HSP 1 Score: 495.4 bits (1274), Expect = 3.0e-136
Identity = 237/253 (93.68%), Postives = 241/253 (95.26%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPM KGG YLQMKLVYNHLAPI LFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYL+LFHILVYKV+PEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDD +E H WIEM S KRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKEDML F RYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF VYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of PI0017351 vs. NCBI nr
Match: XP_023517374.1 (RING-H2 finger protein ATL47-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.4 bits (1274), Expect = 3.0e-136
Identity = 237/253 (93.68%), Postives = 241/253 (95.26%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPM KGG YLQMKLVYNHLAPI LFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYL+LFHILVYKV+PEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDD +E H WIEM SKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWN RSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKEDML F RYINSLPKDY
Sbjct: 181 YRNWNMRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFVVYSEYLI 254
           PDALF VYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of PI0017351 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 346.7 bits (888), Expect = 1.6e-95
Identity = 172/255 (67.45%), Postives = 210/255 (82.35%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQL K S++DSL++LEADI++AN LAA IPM K GV LQMKLV ++LAP  +FLLQWM
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           D S  CLLPRY + FHIL+YKV  +G+  R  SR+GRKATIR+FY +ILPSL+R+H +  
Sbjct: 61  DFS--CLLPRYFDFFHILIYKVRADGRWNR--SRYGRKATIREFYGVILPSLERLHINFA 120

Query: 121 KLDDCKEGHHWIEMSSKKRGDKDG-RLMN-IDMKREDECGICLEPCTKMVLPNCCHSMCI 180
            L D    +   +  +KK+ D +G R MN ID++REDECGICLEPCTKMVLPNCCH+MCI
Sbjct: 121 DLPDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCI 180

Query: 181 KCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPK 240
           KCYRNWNT+SESCPFCRGS+KRVNSEDLWVLTC +DVVD ETV+KED+L+F+ +INSLPK
Sbjct: 181 KCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPK 240

Query: 241 DYPDALFVVYSEYLI 254
           DYP+A F+VY+EYLI
Sbjct: 241 DYPEAAFLVYNEYLI 251

[Close]

BLAST of PI0017351 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 324.7 bits (831), Expect = 6.6e-89
Identity = 154/244 (63.11%), Postives = 194/244 (79.51%), Query Frame = 0


Query: 9   SHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLL 68
           S+ +SL+VLEAD+Q+ANSLA AIPM K  V LQMKLV+++ A ++LFLL+W+D S +CL+
Sbjct: 15  SYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLI 74

Query: 69  PRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEG 128
           PRYLNLFH+LVYKV  +G+ K  ++ HGRKATI +FY +ILPSLQ +H +LD+L+    G
Sbjct: 75  PRYLNLFHVLVYKVQSDGQPK--LTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIG 134

Query: 129 HHWIEMSSK-KRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTR 188
                +S K  +  +  R  N  ++RE+ECGICLE CTKMVLPNCCHSMCIKCYRNWN +
Sbjct: 135 FDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLK 194

Query: 189 SESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFVV 248
           S+SCPFCRGS+KRVNSEDLWVL   +DVVDT T S+ED+ +F+ YINSLPKDYP+ALFVV
Sbjct: 195 SQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVV 254

Query: 249 YSEY 252
           Y EY
Sbjct: 255 YYEY 256

[Close]

BLAST of PI0017351 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 3.6e-79
Identity = 137/220 (62.27%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 33  MAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLLPRYLNLFHILVYKVYPEGKQKRNI 92
           M K  V LQMKLV+++ A ++LFLL+W+D S +CL+PRYLNLFH+LVYKV  +G+ K  +
Sbjct: 1   MGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPK--L 60

Query: 93  SRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEGHHWIEMSSK-KRGDKDGRLMNIDM 152
           + HGRKATI +FY +ILPSLQ +H +LD+L+    G     +S K  +  +  R  N  +
Sbjct: 61  TTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEARSSRFSNAGL 120

Query: 153 KREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTC 212
           +RE+ECGICLE CTKMVLPNCCHSMCIKCYRNWN +S+SCPFCRGS+KRVNSEDLWVL  
Sbjct: 121 EREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAG 180

Query: 213 SDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFVVYSEY 252
            +DVVDT T S+ED+ +F+ YINSLPKDYP+ALFVVY EY
Sbjct: 181 DNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of PI0017351 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-58
Identity = 114/241 (47.30%), Postives = 154/241 (63.90%), Query Frame = 0


Query: 9   SHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLL 68
           S +DSL+ LEADIQ+AN+LA+  P    G Y+QM+L Y+  A + LFLLQW DC      
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 69  PRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEG 128
              L L  IL+YK Y +G  K  +S H RK +IR+FY ++ PSL ++HG +  +++ K+ 
Sbjct: 64  AGALGLLRILIYKAYVDG--KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 129 HHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTRS 188
               +   KK     G++  ID++RE+ECGICLE   K+VLP C HSMCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 189 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFVVY 248
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE++ +   YI+ LP    D   V Y
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 238

Query: 249 S 250
           +
Sbjct: 244 A 238

[Close]

BLAST of PI0017351 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 4.0e-54
Identity = 110/241 (45.64%), Postives = 149/241 (61.83%), Query Frame = 0


Query: 5   LEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSC 64
           + K S +DSL+ LEADIQ+AN++A   P  K G  +QM+L Y   A  +LFL+QW DC  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCH- 60

Query: 65  TCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDD 124
              L   L L  +L+Y  Y +G  K  +S + RK +I+DFYA+I PSL ++   +  LDD
Sbjct: 61  ---LAGTLGLLRVLIYMTYADG--KTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDD 120

Query: 125 CKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNW 184
            K+          K   +  +L  ID++RE+ECGIC+E    +VLPNC HS+CIKCYR+W
Sbjct: 121 RKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDW 180

Query: 185 NTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDAL 244
           + RSESCPFCR SLKRVNS DLW+L    D V+  T+ +E+  +   YI  LP   PD +
Sbjct: 181 HGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQV 235

Query: 245 F 246
           F
Sbjct: 241 F 235

The following BLAST results are available for this feature:

BLAST of PI0017351 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	2.2e-57	47.30	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q4VBT5	8.3e-04	31.58	Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 P...	[more]

BLAST of PI0017351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CUV6	2.0e-146	98.81	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BE96	2.0e-146	98.81	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo OX=3656 GN=LOC103488929 PE=4 ...	[more]
A0A0A0KPZ5	2.1e-143	97.23	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591750 P...	[more]
A0A6J1GXA6	1.5e-136	93.68	RING-H2 finger protein ATL47-like OS=Cucurbita moschata OX=3662 GN=LOC111458273 ...	[more]
A0A6J1K860	7.2e-136	93.28	RING-H2 finger protein ATL47-like OS=Cucurbita maxima OX=3661 GN=LOC111493108 PE...	[more]

BLAST of PI0017351 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446102.1	4.2e-146	98.81	PREDICTED: E3 ubiquitin-protein ligase RNF8-B [Cucumis melo] >KAA0034229.1 E3 ub...	[more]
XP_038893224.1	5.5e-146	98.81	E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida] >XP_038893225.1 E3 ub...	[more]
XP_004135295.1	4.3e-143	97.23	E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN51710.1 hypothetical pro...	[more]
XP_022956578.1	3.0e-136	93.68	RING-H2 finger protein ATL47-like [Cucurbita moschata]	[more]
XP_023517374.1	3.0e-136	93.68	RING-H2 finger protein ATL47-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0017351 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	1.6e-95	67.45	RING/U-box superfamily protein	[more]
AT1G13195.1	6.6e-89	63.11	RING/U-box superfamily protein	[more]
AT1G13195.2	3.6e-79	62.27	RING/U-box superfamily protein	[more]
AT5G01520.1	1.6e-58	47.30	RING/U-box superfamily protein	[more]
AT3G47160.1	4.0e-54	45.64	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 157..194 e-value: 7.8E-4 score: 28.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 155..195 e-value: 2.7E-7 score: 30.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 157..195 score: 11.736875
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 130..206 e-value: 4.8E-12 score: 47.1
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 5..253
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 5..253
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 148..200
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 172..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017351.1	PI0017351.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity