Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTTGAAGAACTTGGGATAAGGGCTGACTTAAAGGATGAAACATATTTAGCTGCCTTTCTGTCTTGTTGGTTGTGCCTCTTTGTGTTTCCACAGAAGGGATCATTTATTCGCCCTGGGGTTTTCAAGATCGCAAGCTTAATGGCCGATGAGACTGTCTATAGTCTTGCAGTCCCTGTTTTAGTCAACATATATCATGGGTTAGGTTTGATAACTGAAGCCTTGAACCCAATCGGACGCATGGACTTTCATTTTCCCATGCATTATGTCCATGGCTGGTTGGCCCATTATTTTAACACACATTACCCACTTCCAGCCGAAGTTCGAGGTCCCAAGATGTCCAACTTTTCTGGTGAAGGTGGGTCTATTTATTTTGGAGAATATGAGGCGCGAGAATTGATCCACAACGGTACAAGAATTCAATGGCACGCAAGCCTTCAGAACTGA
mRNA sequence
ATGTTCTTTGAAGAACTTGGGATAAGGGCTGACTTAAAGGATGAAACATATTTAGCTGCCTTTCTGTCTTGTTGGTTGTGCCTCTTTGTGTTTCCACAGAAGGGATCATTTATTCGCCCTGGGGTTTTCAAGATCGCAAGCTTAATGGCCGATGAGACTGTCTATAGTCTTGCAGTCCCTGTTTTAGTCAACATATATCATGGGTTAGGTTTGATAACTGAAGCCTTGAACCCAATCGGACGCATGGACTTTCATTTTCCCATGCATTATGTCCATGGCTGGTTGGCCCATTATTTTAACACACATTACCCACTTCCAGCCGAAGTTCGAGGTCCCAAGATGTCCAACTTTTCTGGTGAAGGTGGGTCTATTTATTTTGGAGAATATGAGGCGCGAGAATTGATCCACAACGGTACAAGAATTCAATGGCACGCAAGCCTTCAGAACTGA
Coding sequence (CDS)
ATGTTCTTTGAAGAACTTGGGATAAGGGCTGACTTAAAGGATGAAACATATTTAGCTGCCTTTCTGTCTTGTTGGTTGTGCCTCTTTGTGTTTCCACAGAAGGGATCATTTATTCGCCCTGGGGTTTTCAAGATCGCAAGCTTAATGGCCGATGAGACTGTCTATAGTCTTGCAGTCCCTGTTTTAGTCAACATATATCATGGGTTAGGTTTGATAACTGAAGCCTTGAACCCAATCGGACGCATGGACTTTCATTTTCCCATGCATTATGTCCATGGCTGGTTGGCCCATTATTTTAACACACATTACCCACTTCCAGCCGAAGTTCGAGGTCCCAAGATGTCCAACTTTTCTGGTGAAGGTGGGTCTATTTATTTTGGAGAATATGAGGCGCGAGAATTGATCCACAACGGTACAAGAATTCAATGGCACGCAAGCCTTCAGAACTGA
Protein sequence
MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVPVLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGEGGSIYFGEYEARELIHNGTRIQWHASLQN
Homology
BLAST of PI0017327 vs. ExPASy TrEMBL
Match:
A0A5A7SQC9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00140 PE=4 SV=1)
HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGIR DLKDETYLAAFLSCWLCLFVFPQKGSF+RPGVF++ SLMA T+YSLAVP
Sbjct: 1 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVVSLMAAGTIYSLAVP 60
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 61 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 120
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
G SIYFGEYEARELIHNG RIQWHASLQN
Sbjct: 121 GESIYFGEYEARELIHNGARIQWHASLQN 149
BLAST of PI0017327 vs. ExPASy TrEMBL
Match:
A0A5A7SHN8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00400 PE=4 SV=1)
HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGI+ DLKDETYLAAFLSCWLCLF+FPQKGSF+RPGVF+ ASLMA T+YSLAVP
Sbjct: 272 MLFAELGIKDDLKDETYLAAFLSCWLCLFIFPQKGSFLRPGVFRAASLMAACTIYSLAVP 331
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 332 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 391
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
GGSIYFGEYEARELIHNG RIQWHA+LQN
Sbjct: 392 GGSIYFGEYEARELIHNGARIQWHANLQN 420
BLAST of PI0017327 vs. ExPASy TrEMBL
Match:
A0A5A7TZZ9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2963G00230 PE=4 SV=1)
HSP 1 Score: 283.5 bits (724), Expect = 5.1e-73
Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGI+ DLKDETYLAAFLSCWLCLFVFPQKGSF+RPGVF+ ASLMA +T+YSLAVP
Sbjct: 225 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVP 284
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 285 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 344
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
GGSIYFGEYEARELIHN RIQWHA+LQN
Sbjct: 345 GGSIYFGEYEARELIHNCARIQWHANLQN 373
BLAST of PI0017327 vs. ExPASy TrEMBL
Match:
A0A5D3C543 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00620 PE=4 SV=1)
HSP 1 Score: 283.5 bits (724), Expect = 5.1e-73
Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGI+ DLKDETYLAAFLSCWLCLFVFPQKGSF+RPGVF+ ASLMA +T+YSLAVP
Sbjct: 255 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVP 314
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 315 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 374
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
GGSIYFGEYEARELIHN RIQWHA+LQN
Sbjct: 375 GGSIYFGEYEARELIHNCARIQWHANLQN 403
BLAST of PI0017327 vs. ExPASy TrEMBL
Match:
A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)
HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 130/149 (87.25%), Postives = 137/149 (91.95%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGIR DLKDETYLAAFLSCWLCLFVFPQKGSF+R GVF++ASLMA T+YSLAVP
Sbjct: 306 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRLGVFRVASLMAAGTIYSLAVP 365
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 366 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGE 425
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
GGSIYFGEYEARELIHNG RIQWHA+L N
Sbjct: 426 GGSIYFGEYEARELIHNGVRIQWHANLHN 454
BLAST of PI0017327 vs. NCBI nr
Match:
KAA0031751.1 (hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 284.6 bits (727), Expect = 4.8e-73
Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGIR DLKDETYLAAFLSCWLCLFVFPQKGSF+RPGVF++ SLMA T+YSLAVP
Sbjct: 1 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVVSLMAAGTIYSLAVP 60
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 61 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 120
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
G SIYFGEYEARELIHNG RIQWHASLQN
Sbjct: 121 GESIYFGEYEARELIHNGARIQWHASLQN 149
BLAST of PI0017327 vs. NCBI nr
Match:
KAA0025356.1 (hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa])
HSP 1 Score: 284.3 bits (726), Expect = 6.2e-73
Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGI+ DLKDETYLAAFLSCWLCLF+FPQKGSF+RPGVF+ ASLMA T+YSLAVP
Sbjct: 272 MLFAELGIKDDLKDETYLAAFLSCWLCLFIFPQKGSFLRPGVFRAASLMAACTIYSLAVP 331
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 332 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 391
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
GGSIYFGEYEARELIHNG RIQWHA+LQN
Sbjct: 392 GGSIYFGEYEARELIHNGARIQWHANLQN 420
BLAST of PI0017327 vs. NCBI nr
Match:
TYK06278.1 (hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa])
HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGI+ DLKDETYLAAFLSCWLCLFVFPQKGSF+RPGVF+ ASLMA +T+YSLAVP
Sbjct: 255 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVP 314
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 315 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 374
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
GGSIYFGEYEARELIHN RIQWHA+LQN
Sbjct: 375 GGSIYFGEYEARELIHNCARIQWHANLQN 403
BLAST of PI0017327 vs. NCBI nr
Match:
KAA0047546.1 (hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGI+ DLKDETYLAAFLSCWLCLFVFPQKGSF+RPGVF+ ASLMA +T+YSLAVP
Sbjct: 225 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVP 284
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 285 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 344
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
GGSIYFGEYEARELIHN RIQWHA+LQN
Sbjct: 345 GGSIYFGEYEARELIHNCARIQWHANLQN 373
BLAST of PI0017327 vs. NCBI nr
Match:
KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 282.0 bits (720), Expect = 3.1e-72
Identity = 130/149 (87.25%), Postives = 137/149 (91.95%), Query Frame = 0
Query: 1 MFFEELGIRADLKDETYLAAFLSCWLCLFVFPQKGSFIRPGVFKIASLMADETVYSLAVP 60
M F ELGIR DLKDETYLAAFLSCWLCLFVFPQKGSF+R GVF++ASLMA T+YSLAVP
Sbjct: 306 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRLGVFRVASLMAAGTIYSLAVP 365
Query: 61 VLVNIYHGLGLITEALNPIGRMDFHFPMHYVHGWLAHYFNTHYPLPAEVRGPKMSNFSGE 120
VL NIYHGLGLIT+A NPIGRMDFHFPMHYVHGWLAHYF THYPLP EVRGPKM+NFSGE
Sbjct: 366 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGE 425
Query: 121 GGSIYFGEYEARELIHNGTRIQWHASLQN 150
GGSIYFGEYEARELIHNG RIQWHA+L N
Sbjct: 426 GGSIYFGEYEARELIHNGVRIQWHANLHN 454
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SQC9 | 2.3e-73 | 87.92 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7SHN8 | 3.0e-73 | 87.25 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7TZZ9 | 5.1e-73 | 87.25 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5D3C543 | 5.1e-73 | 87.25 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5A7UGW6 | 1.5e-72 | 87.25 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
Match Name | E-value | Identity | Description | |
KAA0031751.1 | 4.8e-73 | 87.92 | hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa] | [more] |
KAA0025356.1 | 6.2e-73 | 87.25 | hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa] | [more] |
TYK06278.1 | 1.1e-72 | 87.25 | hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa] | [more] |
KAA0047546.1 | 1.1e-72 | 87.25 | hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa] | [more] |
KAA0053466.1 | 3.1e-72 | 87.25 | hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |