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PI0017202 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCTATAAAATACATTTATGAAAAACCATCCTTATCGAGAAGAATAGCCAAATGGCAGGTGTTGTTATCAGAGTTTGATATTGTTTACATTACTAGAAAGGCCATAAAGGGAAGTGTGATTGCTAATTGCCTAGCTAAATTACCAATTCAAGACTATGAGCCCATGAAGTTCGACTTTCTGAATGAAGATATTATGGCGGTGGTGAATACCTCACCAAATACATGGACAATGATGTTTGATGGAGCCACAAATGAAGTAGGACACAGTGTGGGAGCTATTTTGATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGTACTAACAATATGGTCGAGTATGAAGCATGTAGTATGGGAATGCATATGGCCTATGAGATGAAAATAAAAAGTTACGAGTCCTTAGAGACTCTCTGTTGGTTGTACATTAGCTGA ATGGATCCTATAAAATACATTTATGAAAAACCATCCTTATCGAGAAGAATAGCCAAATGGCAGGTGTTGTTATCAGAGTTTGATATTGTTTACATTACTAGAAAGGCCATAAAGGGAAGTGTGATTGCTAATTGCCTAGCTAAATTACCAATTCAAGACTATGAGCCCATGAAGTTCGACTTTCTGAATGAAGATATTATGGCGGTGGTGAATACCTCACCAAATACATGGACAATGATGTTTGATGGAGCCACAAATGAAGTAGGACACAGTGTGGGAGCTATTTTGATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGTACTAACAATATGGTCGAGTATGAAGCATGTAGTATGGGAATGCATATGGCCTATGAGATGAAAATAAAAAGTTACGAGTCCTTAGAGACTCTCTGTTGGTTGTACATTAGCTGA ATGGATCCTATAAAATACATTTATGAAAAACCATCCTTATCGAGAAGAATAGCCAAATGGCAGGTGTTGTTATCAGAGTTTGATATTGTTTACATTACTAGAAAGGCCATAAAGGGAAGTGTGATTGCTAATTGCCTAGCTAAATTACCAATTCAAGACTATGAGCCCATGAAGTTCGACTTTCTGAATGAAGATATTATGGCGGTGGTGAATACCTCACCAAATACATGGACAATGATGTTTGATGGAGCCACAAATGAAGTAGGACACAGTGTGGGAGCTATTTTGATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGTACTAACAATATGGTCGAGTATGAAGCATGTAGTATGGGAATGCATATGGCCTATGAGATGAAAATAAAAAGTTACGAGTCCTTAGAGACTCTCTGTTGGTTGTACATTAGCTGA MDPIKYIYEKPSLSRRIAKWQVLLSEFDIVYITRKAIKGSVIANCLAKLPIQDYEPMKFDFLNEDIMAVVNTSPNTWTMMFDGATNEVGHSVGAILMSPDGKWYPLTAKLYFDCTNNMVEYEACSMGMHMAYEMKIKSYESLETLCWLYIS Homology
BLAST of PI0017202 vs. ExPASy TrEMBL
Match: A0A5A7U7X5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001520 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 5.0e-60 Identity = 111/128 (86.72%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of PI0017202 vs. ExPASy TrEMBL
Match: A0A1S3BH42 (uncharacterized protein LOC103489784 OS=Cucumis melo OX=3656 GN=LOC103489784 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 4.7e-58 Identity = 109/142 (76.76%), Postives = 123/142 (86.62%), Query Frame = 0
BLAST of PI0017202 vs. ExPASy TrEMBL
Match: A0A5A7UKV4 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00350 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53 Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 0
BLAST of PI0017202 vs. ExPASy TrEMBL
Match: A0A1S4DTT9 (uncharacterized protein LOC107990505 OS=Cucumis melo OX=3656 GN=LOC107990505 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53 Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 0
BLAST of PI0017202 vs. ExPASy TrEMBL
Match: A0A5D3BPI8 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00050 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.5e-51 Identity = 99/142 (69.72%), Postives = 116/142 (81.69%), Query Frame = 0
BLAST of PI0017202 vs. NCBI nr
Match: KAA0049671.1 (uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa] >TYK12201.1 uncharacterized protein E5676_scaffold106G001520 [Cucumis melo var. makuwa]) HSP 1 Score: 240.4 bits (612), Expect = 1.0e-59 Identity = 111/128 (86.72%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of PI0017202 vs. NCBI nr
Match: XP_008447313.1 (PREDICTED: uncharacterized protein LOC103489784 [Cucumis melo]) HSP 1 Score: 233.8 bits (595), Expect = 9.8e-58 Identity = 109/142 (76.76%), Postives = 123/142 (86.62%), Query Frame = 0
BLAST of PI0017202 vs. NCBI nr
Match: XP_016899404.1 (PREDICTED: uncharacterized protein LOC107990505 [Cucumis melo] >KAA0054926.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] >TYK22715.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]) HSP 1 Score: 219.2 bits (557), Expect = 2.5e-53 Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 0
BLAST of PI0017202 vs. NCBI nr
Match: KAA0033845.1 (uncharacterized protein E6C27_scaffold43059G00190 [Cucumis melo var. makuwa] >TYK01227.1 uncharacterized protein E5676_scaffold49G00050 [Cucumis melo var. makuwa]) HSP 1 Score: 211.5 bits (537), Expect = 5.2e-51 Identity = 99/142 (69.72%), Postives = 116/142 (81.69%), Query Frame = 0
BLAST of PI0017202 vs. NCBI nr
Match: TYK05800.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 208.8 bits (530), Expect = 3.4e-50 Identity = 97/117 (82.91%), Postives = 106/117 (90.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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