PI0017201 (gene) Melon (PI 482460) v1

Overview
NamePI0017201
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 415833 .. 417963 (-)
RNA-Seq ExpressionPI0017201
SyntenyPI0017201
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGAGATGAGCAAGAAGGTTGTTTTGTTAGCAATGGCGGTCCTGATGCTCATGGCCATTTCAGCTCGAGCCACCTCCTCCGAAGTTGGTGAGGTGATTGAACTCCCATCCGATGAGGCGAACGAGGTGGTGCCAATGAATATGGACATGTGGTCGAGAAAAATGATGAAAGAAGGAGGCCGAAAGGGGGAAAATGGACTATGCTTGCTTATAGGCACTCCATGCAACAGCGATGCAAACTGCTTATCTGGGTGCAGGTGCAAAACCACTCTAATATTAAAACTGGGATTATGTAGTCCCTTTTGATTATCAATTTATGAATGTTTTTCTTTATAACCTAAGTTATTACCAATATATGCCTTTGTCTAAGTTATTAGAATAAATTGTATACATTTTCTATGTTTCCATGTTTTTCAAGAATAAAGTGGAGGTTTTTCTTCTCTCTCAACATTAAATTTGTATATAAACATATTGTGTTAAATTTAAAACTCAAGAACTGTTAGGAACTTACAAAAAAAAGAAAAAATGTGAGCGTAAGTGAAACATTGGAAGGAATGCATAAAAAGTAAAAGATGTAGTTAGATACAGTCTTTAGAATCAAAATGGAAAAAAAATATATCCAATTTTGAAATAGAGGTTAAGTGGAATGAATATAAAATTAAAAACATCAAAGTATTATCTTTTCAAATATATGCTCAAACAATTTTGAAAAAATAAATAAATTTAACAATGTGATAAAAAATAAATAAATAAATAAATTTTGAAAGGGAGGCCGGAGGAAACCCTTTATTTCAATGTAAAGCAAAGAATAAAACAAATATACATGTAAAATGATGTATAACAATGTGATCAAGAAATTAAATTTGTTCGATTTGATTTAAAGAATCGATTTGATTTAGAGAAACGGCTATTAATGATATTCGATATAATTAACGATTTAGTATTGGAGAGACTAAAAATAATTAATTAAAATTTTAATATAAAAAATTTGAATAAGGATCCAAATTAAGATGAATTGGATGGATCCGGATTTGTGGCGGAAAATAATAATATAATATTAATTAAGTAAATAGTTTAATTATTTATTTATACATTTTTATTTTATTAAAATATAGTTTTAAATTAATTAATTAGATTAATTAATAATAAATTTATTTAATTAATTGATCAAAATTGGATTTTGAAAGTCAAACAATCAAGTTGTCTAAAGTTAGTGAACATTTCCAACTCTTAGTGAAGAGTGATTGAGCTACTTGCTTAAGTGTATTGTTAATCCCACAAACCCCACTTTGTATCAATGCTAAGTGTCAAATTAATAAATGTTATTAATTTGCATGTTAATTAGCTATATATAGATGAGGTTTAACTTAATTAATGGTTTAATGAACATAGTGGAATTTGCTGAAATTCCTTCGTATTCCTAATTCTCTTTCAATTCAAAGTTTTAGCTTCCAAATTGATCACAAGTTTGATCTTACAGTCAAATTTTAAGTCTTGAGAATAACGAAAAAGATCTTGATGGTGATCCTTTCTGGTTCGTGATCAACAACAACAAGAAGCTCGTGGTTAATTATTTGAGCTTCAAAAGTATATGAACCCTAAAACTTTGTTTTTGTGTATTTTTAAAAGCATGCTTAATTCTTAATTAAAATTAGTATAATTAGGATGATATTAGATCTAATTGCTTCTTCTACACGTTAGTATACTCTTTCACTAGAAGTGTCATCGAACTTCTACACGTTGAAAGGAAAATAACGTAAAAGGTTGTGGATTTCTCGTTCTTATAGAAAAAGATTGAAAGATGATCAAGAAGAAACGTTGTAGTTGAAGGAACTGTATAAAAAACGCAAAAGGAGCTGAAGCTGCAAAATGTGAGAGGAAAAGAAAAAGAAAGAAAAGAAACGAAAAGAAAAGTAGATTTAAAAATTGTTTGAGTGACAATGTTTACCTTCATGTGATGCTTTGTATGAAGAGCATACGTAAGAATTTTTGTCATACCCGTGGCTAAGAGAGGAACCCAGTGGCACATACGAAGAGTACACTAGGATGAAAATCTATTAAAGAAGATATATCTTACGGTGAATGAGAGGATGAGTAGGAAATAGTAAATATCATAAGAAAGAGAAAT

mRNA sequence

ATGATGGAGATGAGCAAGAAGGTTGTTTTGTTAGCAATGGCGGTCCTGATGCTCATGGCCATTTCAGCTCGAGCCACCTCCTCCGAAGTTGGTGAGGTGATTGAACTCCCATCCGATGAGGCGAACGAGGTGGTGCCAATGAATATGGACATGTGGTCGAGAAAAATGATGAAAGAAGGAGGCCGAAAGGGGGAAAATGGACTATGCTTGCTTATAGGCACTCCATGCAACAGCGATGCAAACTGCTTATCTGGGTGCAGAAAAAGATTGAAAGATGATCAAGAAGAAACGTTGTAGTTGAAGGAACTGTATAAAAAACGCAAAAGGAGCTGAAGCTGCAAAATGTGAGAGGAAAAGAAAAAGAAAGAAAAGAAACGAAAAGAAAAGTAGATTTAAAAATTGTTTGAGTGACAATGTTTACCTTCATGTGATGCTTTGTATGAAGAGCATACGTAAGAATTTTTGTCATACCCGTGGCTAAGAGAGGAACCCAGTGGCACATACGAAGAGTACACTAGGATGAAAATCTATTAAAGAAGATATATCTTACGGTGAATGAGAGGATGAGTAGGAAATAGTAAATATCATAAGAAAGAGAAAT

Coding sequence (CDS)

ATGATGGAGATGAGCAAGAAGGTTGTTTTGTTAGCAATGGCGGTCCTGATGCTCATGGCCATTTCAGCTCGAGCCACCTCCTCCGAAGTTGGTGAGGTGATTGAACTCCCATCCGATGAGGCGAACGAGGTGGTGCCAATGAATATGGACATGTGGTCGAGAAAAATGATGAAAGAAGGAGGCCGAAAGGGGGAAAATGGACTATGCTTGCTTATAGGCACTCCATGCAACAGCGATGCAAACTGCTTATCTGGGTGCAGAAAAAGATTGAAAGATGATCAAGAAGAAACGTTGTAG

Protein sequence

MMEMSKKVVLLAMAVLMLMAISARATSSEVGEVIELPSDEANEVVPMNMDMWSRKMMKEGGRKGENGLCLLIGTPCNSDANCLSGCRKRLKDDQEETL
Homology
[Close]
BLAST of PI0017201 vs. ExPASy TrEMBL
Match: A0A5D3E1J3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00550 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.6e-27
Identity = 74/89 (83.15%), Postives = 77/89 (86.52%), Query Frame = 0 

Query: 1  MME-MSKKVVLLAMAVLMLMAISARATSSEVGEVIELPSDEANEVVPMNMDMWSRKMMKE 60
          MME MSKKV LLAMAVLMLMAISA ATSSEV EVIELPSDEAN VV  NM+MWSRKMMKE
Sbjct: 1  MMEIMSKKVGLLAMAVLMLMAISAGATSSEVDEVIELPSDEANMVVATNMEMWSRKMMKE 60

Query: 61 GGRKGE-NGLCLLIGTPCNSDANCLSGCR 88
          G RKG  NGLCL++GTPCNSD NC SGCR
Sbjct: 61 GDRKGSGNGLCLIVGTPCNSDENCFSGCR 89

[Close]
BLAST of PI0017201 vs. ExPASy TrEMBL
Match: A0A5A7TM06 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00550 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.8e-27
Identity = 73/89 (82.02%), Postives = 76/89 (85.39%), Query Frame = 0 

Query: 1  MME-MSKKVVLLAMAVLMLMAISARATSSEVGEVIELPSDEANEVVPMNMDMWSRKMMKE 60
          MME MSKKV  LAMAVLMLMAISA ATSSEV EVIELPSDEAN VV  NM+MWSRKMMKE
Sbjct: 1  MMEIMSKKVGFLAMAVLMLMAISAGATSSEVDEVIELPSDEANMVVATNMEMWSRKMMKE 60

Query: 61 GGRKGE-NGLCLLIGTPCNSDANCLSGCR 88
          G RKG  NGLCL++GTPCNSD NC SGCR
Sbjct: 61 GDRKGSGNGLCLIVGTPCNSDENCFSGCR 89

[Close]
BLAST of PI0017201 vs. NCBI nr
Match: KAE8649030.1 (hypothetical protein Csa_015018 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 4.1e-33
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0 

Query: 1  MMEMSKKVVLLAMAVLMLMAISARATSSEVGEVIELPSDEANEVVPMNMDMWSRKMMKEG 60
          MMEM KKV LLAMAVLMLM ISARATSSEVG VIELPSDEA+EVVP NM+MWSRKMMKEG
Sbjct: 1  MMEMRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEG 60

Query: 61 GRKGENGLCLLIGTPCNSDANCLSGCRKR 90
          GRKG+NGLCL+IGTPCNSDANCLSGC+ R
Sbjct: 61 GRKGDNGLCLIIGTPCNSDANCLSGCKCR 89

[Close]
BLAST of PI0017201 vs. NCBI nr
Match: TYK29461.1 (hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 3.4e-27
Identity = 74/89 (83.15%), Postives = 77/89 (86.52%), Query Frame = 0 

Query: 1  MME-MSKKVVLLAMAVLMLMAISARATSSEVGEVIELPSDEANEVVPMNMDMWSRKMMKE 60
          MME MSKKV LLAMAVLMLMAISA ATSSEV EVIELPSDEAN VV  NM+MWSRKMMKE
Sbjct: 1  MMEIMSKKVGLLAMAVLMLMAISAGATSSEVDEVIELPSDEANMVVATNMEMWSRKMMKE 60

Query: 61 GGRKGE-NGLCLLIGTPCNSDANCLSGCR 88
          G RKG  NGLCL++GTPCNSD NC SGCR
Sbjct: 61 GDRKGSGNGLCLIVGTPCNSDENCFSGCR 89

[Close]
BLAST of PI0017201 vs. NCBI nr
Match: KAA0044332.1 (hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 9.9e-27
Identity = 73/89 (82.02%), Postives = 76/89 (85.39%), Query Frame = 0 

Query: 1  MME-MSKKVVLLAMAVLMLMAISARATSSEVGEVIELPSDEANEVVPMNMDMWSRKMMKE 60
          MME MSKKV  LAMAVLMLMAISA ATSSEV EVIELPSDEAN VV  NM+MWSRKMMKE
Sbjct: 1  MMEIMSKKVGFLAMAVLMLMAISAGATSSEVDEVIELPSDEANMVVATNMEMWSRKMMKE 60

Query: 61 GGRKGE-NGLCLLIGTPCNSDANCLSGCR 88
          G RKG  NGLCL++GTPCNSD NC SGCR
Sbjct: 61 GDRKGSGNGLCLIVGTPCNSDENCFSGCR 89

The following BLAST results are available for this feature:
BLAST of PI0017201 vs.
Match NameE-valueIdentityDescription
BLAST of PI0017201 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E1J31.6e-2783.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TM064.8e-2782.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of PI0017201 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649030.14.1e-3387.64hypothetical protein Csa_015018 [Cucumis sativus][more]
TYK29461.13.4e-2783.15hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa][more]
KAA0044332.19.9e-2782.02hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa][more]
BLAST of PI0017201 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017201.1PI0017201.1mRNA