PI0017163 (gene) Melon (PI 482460) v1

Overview
NamePI0017163
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionMajor pollen allergen Ole e 6-like
Locationchr09: 5056467 .. 5057302 (+)
RNA-Seq ExpressionPI0017163
SyntenyPI0017163
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAAATAGACTTACTAAAAGCTAAAAGAAAAAAATGGCAAAAAACATGATGGTTGTTTTCTTTATGTGCATTGTTGTGGTGGGATTACTGCAATTCTCTAAGGCAGACATGACCGCTGAGCAGAAAGCCAAGATGAATAATCTCATAAGTCAAATGTCTAGTTTAGAGCCTCAATACACATCATGTAGAGAAACCTGTGATAAAGCATGCATAGCAAAAGGCACTGACAACACTTTATGTCATACTACATGCGATCAAGATTGCATGCAAAAGGAAGTTATTGGTATTTTCTTGAATCTCTGGAGAAATTTTTTTTTTTTATCAAGACAATAATTAATTTTTTCTGTGTGGTTAATTTTAGTTGCGAGGCAAATTTGACCTTTATTATTGAAATTAGTGAGTTTTGTAAGATCCATGTTCCTTCCTTTAATACTTTTGATGGTAGAATTTGAAGGGATGATAATAAAAACTCATGCCAAAATTTAAGAAAAATTTAATTGCTTATTTCTTCTAACTTATTGATCTTTTTGTGTGTGTGTGTTAATTTGATTTTTTATGTGTTTGTTTTGCAGATAAAGTCAAGGCCTAACTACCCATTGATAATTGACCACGAAGTTAAAGTAGAGATCTCGAAAATGATCGGATCAAGTATAAATTATTTGAATAATTAACATTTTAGAAAGGAAAATCTAAATTCCTTAACCCTCTTTCATTTTTGTCATCCAATTTTGTTGTATCTTTAAACAAAGGTTTTATCATCTGTATCGTTGTGTGCTTCTTTCATCATTATTTTCAACAACGAGATCAATAAAATAAATTTAATTTTAGTGTTT

mRNA sequence

GAAAAAAATAGACTTACTAAAAGCTAAAAGAAAAAAATGGCAAAAAACATGATGGTTGTTTTCTTTATGTGCATTGTTGTGGTGGGATTACTGCAATTCTCTAAGGCAGACATGACCGCTGAGCAGAAAGCCAAGATGAATAATCTCATAAGTCAAATGTCTAGTTTAGAGCCTCAATACACATCATGTAGAGAAACCTGTGATAAAGCATGCATAGCAAAAGGCACTGACAACACTTTATGTCATACTACATGCGATCAAGATTGCATGCAAAAGGAAGTTATTGATAAAGTCAAGGCCTAACTACCCATTGATAATTGACCACGAAGTTAAAGTAGAGATCTCGAAAATGATCGGATCAAGTATAAATTATTTGAATAATTAACATTTTAGAAAGGAAAATCTAAATTCCTTAACCCTCTTTCATTTTTGTCATCCAATTTTGTTGTATCTTTAAACAAAGGTTTTATCATCTGTATCGTTGTGTGCTTCTTTCATCATTATTTTCAACAACGAGATCAATAAAATAAATTTAATTTTAGTGTTT

Coding sequence (CDS)

ATGGCAAAAAACATGATGGTTGTTTTCTTTATGTGCATTGTTGTGGTGGGATTACTGCAATTCTCTAAGGCAGACATGACCGCTGAGCAGAAAGCCAAGATGAATAATCTCATAAGTCAAATGTCTAGTTTAGAGCCTCAATACACATCATGTAGAGAAACCTGTGATAAAGCATGCATAGCAAAAGGCACTGACAACACTTTATGTCATACTACATGCGATCAAGATTGCATGCAAAAGGAAGTTATTGATAAAGTCAAGGCCTAA

Protein sequence

MAKNMMVVFFMCIVVVGLLQFSKADMTAEQKAKMNNLISQMSSLEPQYTSCRETCDKACIAKGTDNTLCHTTCDQDCMQKEVIDKVKA
Homology
BLAST of PI0017163 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 9.6e-19
Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 0

Query: 1  MAKNMMVVFFMCI-VVVGLLQFSKADMTAEQKAKMNN----LISQMSSLEPQYTSCRETC 60
          MAK+  +VFFMCI VVVG LQFS+ADMTAE+  ++      L S++S++ PQ+ SC ETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 DKACIAKGTDNTLCHTTCDQDCMQKEVIDKV 87
           KACIAK + NT CH+TCD+DCM+KEV+DK+
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKI 91

BLAST of PI0017163 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.1e-17
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 1  MAKNMMVVFFMCI-VVVGLLQFSKADMTAEQKAKMNN----LISQMSSLEPQYTSCRETC 60
          MAK   VVFFMCI VVVG LQFS+ADMTA++  ++      L S++SS+ PQ+ SC ETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 DKACIAKGTDNTLCHTTCDQDCMQKEVI 84
          +KACIAK   NT CH+TCD+DCM+KEV+
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

BLAST of PI0017163 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-08
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 0

Query: 1  MAKNMMVVFFMCIVVVGLLQFSKADMTAEQKAKMNNLISQMSSLEPQYTSCRETCDKACI 60
          MAK M+ +F MCIVVV  LQF+ A+       K + +    +  + +Y SC +TC+K C+
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASAN-------KEDEVAKYEAKFDAKYKSCFKTCEKECL 60

Query: 61 AKGTDNTLCHTTCDQDCMQKEVIDKV 87
            G+  + C   CD+DC +KEV DK+
Sbjct: 61 ENGSGQSYCEVKCDEDCNEKEVADKL 79

BLAST of PI0017163 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-08
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 0

Query: 1  MAKNMMVVFFMCIVVVGLLQFSKADMTAEQKAKMNNLISQMSSLEPQYTSCRETCDKACI 60
          MAK M+ +F MCIVVV  LQF+ A+       K + +    +  + +Y SC +TC+K C+
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASAN-------KEDEVAKYEAKFDAKYKSCFKTCEKECL 60

Query: 61 AKGTDNTLCHTTCDQDCMQKEVIDKV 87
            G+  + C   CD+DC +KEV DK+
Sbjct: 61 ENGSGQSYCEVKCDEDCNEKEVADKL 79

BLAST of PI0017163 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.9e-08
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 0

Query: 1  MAKNMMVVFFMCIVVVGLLQFSKADMTAEQKAKMNNLISQMSSLEPQYTSCRETCDKACI 60
          MAK MM VF MCIVVV  LQF+ A+       K   + S  +  + +Y +C  TC+K CI
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATAN-------KEYEVASYEAKFDAKYKACFVTCEKECI 60

Query: 61 AKGTDNTLCHTTCDQDCMQKEVIDKV 87
           +G+ ++ C   CD+DC  KE  DK+
Sbjct: 61 ERGSGHSYCEVKCDEDCGAKEAADKL 79

BLAST of PI0017163 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18
Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 0

Query: 1  MAKNMMVVFFMCI-VVVGLLQFSKADMTAEQKAKMNN----LISQMSSLEPQYTSCRETC 60
          MAK+  +VFFMCI VVVG LQFS+ADMTAE+  ++      L S++S++ PQ+ SC ETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 DKACIAKGTDNTLCHTTCDQDCMQKEVIDKV 87
           KACIAK + NT CH+TCD+DCM+KEV+DK+
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKI 91

BLAST of PI0017163 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 6.4e-17
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 1  MAKNMMVVFFMCI-VVVGLLQFSKADMTAEQKAKMNN----LISQMSSLEPQYTSCRETC 60
          MAK   VVFFMCI VVVG LQFS+ADMTA++  ++      L S++SS+ PQ+ SC ETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 DKACIAKGTDNTLCHTTCDQDCMQKEVI 84
          +KACIAK   NT CH+TCD+DCM+KEV+
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

BLAST of PI0017163 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-10
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 0

Query: 1  MAKNMMVVFFMCIVVVGLLQFSKADMTAEQKAKMNNLISQMSSLEPQYTSCRETCDKACI 60
          MAK MM V  MC+++V  LQFS AD  AE +A+  +    +S +E +  SC  TC+K C+
Sbjct: 1  MAKKMMAVLLMCVLLVSALQFSTADSPAEMEARFKSFFGDLSGVEAKLKSCAATCEKECV 60

Query: 61 AKGTDNTLCHTTCDQDCMQKEVIDK 86
          AKG  +  C   C+ DC +KEV +K
Sbjct: 61 AKGETSESCKPKCNTDCGKKEVSEK 85

BLAST of PI0017163 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 3.4e-10
Identity = 43/85 (50.59%), Postives = 51/85 (60.00%), Query Frame = 0

Query: 3   KNMMVVFFMCIVVVGLLQFSKADMTAE-----QKAKMNNLISQMSSLEPQYTSCRETCDK 62
           KN+MVVFFMCIVV+G LQFSKA  TA      Q A+    I++   L PQ  SC  TC K
Sbjct: 20  KNIMVVFFMCIVVMGSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCRK 79

Query: 63  ACIAKGTDNTLCHTTCDQDCMQKEV 83
            C AKG  N  CH  C+ DC +K +
Sbjct: 80  ECDAKGNANASCHQKCNNDCTEKTI 104

BLAST of PI0017163 vs. NCBI nr
Match: KAG6590396.1 (hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-09
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0

Query: 1  MAKNMMVVFFMCIVVVGLLQFSKAD-MTAEQKAKMNNLISQMSSLEPQYTSCRETCDKAC 60
          M K MM VF +C+++V +LQFS AD  TAE +AKM +L S   +++ +  +C ETC+K C
Sbjct: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60

Query: 61 IAKGTDNTLCHTTCDQDCMQKEVIDK 86
            KG  N  CH+ C+ +C +KEV DK
Sbjct: 61 --KG--NNKCHSDCETNCGKKEVADK 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T3F99.6e-1959.34Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5A7SXV73.1e-1760.23Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5D3BCS22.6e-0839.53Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5302.6e-0839.53major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
A0A0A0KDP79.9e-0841.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0036015.12.0e-1859.34major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAA0035393.16.4e-1760.23major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAG6595587.11.2e-1043.53hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8637567.13.4e-1050.59hypothetical protein CSA_017844, partial [Cucumis sativus][more]
KAG6590396.11.7e-0946.51hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 45..88
e-value: 2.0E-10
score: 42.0
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 45..86
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..87
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017163.1PI0017163.1mRNA