PI0017161 (gene) Melon (PI 482460) v1

Overview
NamePI0017161
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionAuxin responsive SAUR protein
Locationchr04: 32626959 .. 32628035 (+)
RNA-Seq ExpressionPI0017161
SyntenyPI0017161
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATAAACCAAAGTCGGCAACGGCTCAAAAATAATCCCAATTCTAAAACTAAACACTTAACTCGATATTTCCAAGAAGATTCTTCCTCCATCTCAACGGATCCTTCTCTCTCTCTTTCCACTTCCTCACAATAATGACCTTTCACCCACATTTAACAATTACACTTCACCAATTAAAACCTATATATATAAACAAATAAAACCTCTTCTCAATATTACCTTTCTTTTTTTCTTTCTATCTCCTTAAAAGACTTTTTCAATAAGACCCTTTCAACACCATCTATCTTTCCTTCCATCTATATAAACTTAGATCTATGATTTTTCCTCTACACTAATTAACCCTAAACAATACTATCTTTACCTCTTCTAACAAAACCCCAAAATGGGTTGTTTGATTCTTCCTTGCTACGTCATGAAGAGACGACGCCGGAGATCAACCCGACCGCACCTCAGCTACCGCCGTCTCAACAAATCCGACTTCGGACGCAACGATATTGGAGATGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGAAAAGAGAGAAGAGAATTCTTAGTAGACCCTTTTGTGTTGGAAGAAAATCCATTTCGGATTTTGATCGAAAAGGGTGGAGATGACGATGACGATGGAGATGGAGATGGAAAAAGGAAAAGGGTTATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGCTATGGCTAATGTATAACGATTGTTCTTCTTTGTTTAAGCTAAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAGAGGGAGAGAGATATATAGAATTCAGAGAAACATAATTAAAGGTATAATTCAGTCAAGATATATATATATATACACACATATGTATTTGCAATAATTGATAAAGTTTATGTAAATGGTGTTCCTGTGATGGAATTAACAAAATAAGATATTAATTATTCAAGTTAGGCTTCGTTTCACCAAAGGCTAATAATTGAGTTGAGCTCAATTGATCAGAACCTTACAACGTGGACAACTTCAACAACAACACCTATGCTTAGTACATCTCCAGCATTTCACATATCCCAAGTTGATGTTAG

mRNA sequence

CTCATAAACCAAAGTCGGCAACGGCTCAAAAATAATCCCAATTCTAAAACTAAACACTTAACTCGATATTTCCAAGAAGATTCTTCCTCCATCTCAACGGATCCTTCTCTCTCTCTTTCCACTTCCTCACAATAATGACCTTTCACCCACATTTAACAATTACACTTCACCAATTAAAACCTATATATATAAACAAATAAAACCTCTTCTCAATATTACCTTTCTTTTTTTCTTTCTATCTCCTTAAAAGACTTTTTCAATAAGACCCTTTCAACACCATCTATCTTTCCTTCCATCTATATAAACTTAGATCTATGATTTTTCCTCTACACTAATTAACCCTAAACAATACTATCTTTACCTCTTCTAACAAAACCCCAAAATGGGTTGTTTGATTCTTCCTTGCTACGTCATGAAGAGACGACGCCGGAGATCAACCCGACCGCACCTCAGCTACCGCCGTCTCAACAAATCCGACTTCGGACGCAACGATATTGGAGATGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGAAAAGAGAGAAGAGAATTCTTAGTAGACCCTTTTGTGTTGGAAGAAAATCCATTTCGGATTTTGATCGAAAAGGGTGGAGATGACGATGACGATGGAGATGGAGATGGAAAAAGGAAAAGGGTTATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGCTATGGCTAATGTATAACGATTGTTCTTCTTTGTTTAAGCTAAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAGAGGGAGAGAGATATATAGAATTCAGAGAAACATAATTAAAGGTATAATTCAGTCAAGATATATATATATATACACACATATGTATTTGCAATAATTGATAAAGTTTATGTAAATGGTGTTCCTGTGATGGAATTAACAAAATAAGATATTAATTATTCAAGTTAGGCTTCGTTTCACCAAAGGCTAATAATTGAGTTGAGCTCAATTGATCAGAACCTTACAACGTGGACAACTTCAACAACAACACCTATGCTTAGTACATCTCCAGCATTTCACATATCCCAAGTTGATGTTAG

Coding sequence (CDS)

ATGGGTTGTTTGATTCTTCCTTGCTACGTCATGAAGAGACGACGCCGGAGATCAACCCGACCGCACCTCAGCTACCGCCGTCTCAACAAATCCGACTTCGGACGCAACGATATTGGAGATGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGAAAAGAGAGAAGAGAATTCTTAGTAGACCCTTTTGTGTTGGAAGAAAATCCATTTCGGATTTTGATCGAAAAGGGTGGAGATGACGATGACGATGGAGATGGAGATGGAAAAAGGAAAAGGGTTATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGCTATGGCTAATGTATAACGATTGTTCTTCTTTGTTTAAGCTAAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAG

Protein sequence

MGCLILPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFLVDPFVLEENPFRILIEKGGDDDDDGDGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF
Homology
BLAST of PI0017161 vs. ExPASy TrEMBL
Match: A0A5D3E5S1 (Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004380 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 121/135 (89.63%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1   MGCLILPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFLVD 60
           MGCL+LPCYVMKRRRRRSTRPHL Y RL+KS+FGRND  DAESSLVKVVAGKERREFLVD
Sbjct: 1   MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 60

Query: 61  PFVLEENPFRILIEKGGDDDDDGDGD---GKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120
           PFVLEENPFR LIEKGGD DDD DGD   GK+KRVIFVDVDAILFEHLLWLMYNDCSSLF
Sbjct: 61  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 120

Query: 121 KLNVEEILDFYAQDF 133
           KLNVEEILDFYAQDF
Sbjct: 121 KLNVEEILDFYAQDF 135

BLAST of PI0017161 vs. ExPASy TrEMBL
Match: A0A1S3CQ48 (uncharacterized protein LOC103503536 OS=Cucumis melo OX=3656 GN=LOC103503536 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 121/135 (89.63%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1   MGCLILPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFLVD 60
           MGCL+LPCYVMKRRRRRSTRPHL Y RL+KS+FGRND  DAESSLVKVVAGKERREFLVD
Sbjct: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84

Query: 61  PFVLEENPFRILIEKGGDDDDDGDGD---GKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120
           PFVLEENPFR LIEKGGD DDD DGD   GK+KRVIFVDVDAILFEHLLWLMYNDCSSLF
Sbjct: 85  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 144

Query: 121 KLNVEEILDFYAQDF 133
           KLNVEEILDFYAQDF
Sbjct: 145 KLNVEEILDFYAQDF 159

BLAST of PI0017161 vs. ExPASy TrEMBL
Match: A0A0A0LK59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902380 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.9e-61
Identity = 124/135 (91.85%), Postives = 129/135 (95.56%), Query Frame = 0

Query: 1   MGCLILPCYVMK-RRRRRSTRPHLSYRRLNKSDFGRND-IGD-AESSLVKVVAGKERREF 60
           MGCL+LPCYVMK RRRRRST+PHL Y RLNKS+FGRN+ IGD AESSLVKVVAGKERREF
Sbjct: 1   MGCLVLPCYVMKRRRRRRSTQPHLGYHRLNKSNFGRNEYIGDHAESSLVKVVAGKERREF 60

Query: 61  LVDPFVLEENPFRILIEKGGDDDDDGDGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120
           LVDPFVLEENPFRILIEKGGDDD+D DGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLF
Sbjct: 61  LVDPFVLEENPFRILIEKGGDDDEDEDGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120

Query: 121 KLNVEEILDFYAQDF 133
           KLNVEEILDFYAQDF
Sbjct: 121 KLNVEEILDFYAQDF 135

BLAST of PI0017161 vs. ExPASy TrEMBL
Match: A0A6J1EYP5 (uncharacterized protein LOC111437423 OS=Cucurbita moschata OX=3662 GN=LOC111437423 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34
Identity = 88/137 (64.23%), Postives = 101/137 (73.72%), Query Frame = 0

Query: 1   MGCLI--LPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFL 60
           M CL+  LPCYVMKRRRRR T P L YRRLNKS+           SLV+VV GKER EFL
Sbjct: 1   MDCLVLLLPCYVMKRRRRR-TAPRLPYRRLNKSE-----------SLVRVVVGKERTEFL 60

Query: 61  VDPFVLEENPFRILIEKGGDDDDDGDGDGKRKR---VIFVDVDAILFEHLLWLMYNDCSS 120
           VDPFVLEENPFR+L+EKG  ++      GKR+R   +IFVDVDAILFEH LWL+YND SS
Sbjct: 61  VDPFVLEENPFRVLMEKGRFEEK----QGKRRREEHIIFVDVDAILFEHFLWLIYNDSSS 120

Query: 121 LFKLNVEEILDFYAQDF 133
           L  LN++EIL FY+QDF
Sbjct: 121 LLTLNLDEILHFYSQDF 121

BLAST of PI0017161 vs. ExPASy TrEMBL
Match: A0A6J1K475 (uncharacterized protein LOC111491030 OS=Cucurbita maxima OX=3661 GN=LOC111491030 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.1e-33
Identity = 83/133 (62.41%), Postives = 101/133 (75.94%), Query Frame = 0

Query: 1   MGCLI-LPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFLV 60
           MGCL+ LPCYVMK RRRR T P L YRRL+KS+           SLV+VV G+ER EFLV
Sbjct: 1   MGCLVLLPCYVMKTRRRR-TAPRLPYRRLDKSE-----------SLVRVVVGEERTEFLV 60

Query: 61  DPFVLEENPFRILIEKGGDDDDDGDGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLFKL 120
           DPFVLEENPFR+L+EKG  ++ +G    + + +IFVDVDAILFEHLLWL+YND SSL  L
Sbjct: 61  DPFVLEENPFRVLMEKGRFEEKEGKRRSE-EHIIFVDVDAILFEHLLWLIYNDSSSLLTL 120

Query: 121 NVEEILDFYAQDF 133
           N++EIL FY+Q+F
Sbjct: 121 NLDEILHFYSQEF 120

BLAST of PI0017161 vs. NCBI nr
Match: XP_008465964.1 (PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 8.2e-61
Identity = 121/135 (89.63%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1   MGCLILPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFLVD 60
           MGCL+LPCYVMKRRRRRSTRPHL Y RL+KS+FGRND  DAESSLVKVVAGKERREFLVD
Sbjct: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84

Query: 61  PFVLEENPFRILIEKGGDDDDDGDGD---GKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120
           PFVLEENPFR LIEKGGD DDD DGD   GK+KRVIFVDVDAILFEHLLWLMYNDCSSLF
Sbjct: 85  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 144

Query: 121 KLNVEEILDFYAQDF 133
           KLNVEEILDFYAQDF
Sbjct: 145 KLNVEEILDFYAQDF 159

BLAST of PI0017161 vs. NCBI nr
Match: KAA0038583.1 (Auxin responsive SAUR protein [Cucumis melo var. makuwa] >TYK31158.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.8 bits (621), Expect = 8.2e-61
Identity = 121/135 (89.63%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1   MGCLILPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFLVD 60
           MGCL+LPCYVMKRRRRRSTRPHL Y RL+KS+FGRND  DAESSLVKVVAGKERREFLVD
Sbjct: 1   MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 60

Query: 61  PFVLEENPFRILIEKGGDDDDDGDGD---GKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120
           PFVLEENPFR LIEKGGD DDD DGD   GK+KRVIFVDVDAILFEHLLWLMYNDCSSLF
Sbjct: 61  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 120

Query: 121 KLNVEEILDFYAQDF 133
           KLNVEEILDFYAQDF
Sbjct: 121 KLNVEEILDFYAQDF 135

BLAST of PI0017161 vs. NCBI nr
Match: XP_011652654.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KGN60396.1 hypothetical protein Csa_001277 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60
Identity = 124/135 (91.85%), Postives = 129/135 (95.56%), Query Frame = 0

Query: 1   MGCLILPCYVMK-RRRRRSTRPHLSYRRLNKSDFGRND-IGD-AESSLVKVVAGKERREF 60
           MGCL+LPCYVMK RRRRRST+PHL Y RLNKS+FGRN+ IGD AESSLVKVVAGKERREF
Sbjct: 1   MGCLVLPCYVMKRRRRRRSTQPHLGYHRLNKSNFGRNEYIGDHAESSLVKVVAGKERREF 60

Query: 61  LVDPFVLEENPFRILIEKGGDDDDDGDGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120
           LVDPFVLEENPFRILIEKGGDDD+D DGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLF
Sbjct: 61  LVDPFVLEENPFRILIEKGGDDDEDEDGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120

Query: 121 KLNVEEILDFYAQDF 133
           KLNVEEILDFYAQDF
Sbjct: 121 KLNVEEILDFYAQDF 135

BLAST of PI0017161 vs. NCBI nr
Match: XP_038888374.1 (uncharacterized protein LOC120078224 [Benincasa hispida])

HSP 1 Score: 226.9 bits (577), Expect = 1.0e-55
Identity = 114/132 (86.36%), Postives = 121/132 (91.67%), Query Frame = 0

Query: 1   MGCLILPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFLVD 60
           M CL+LPCYVMKRRRRRSTRP L Y RLNKS+ GR D   AESSLVKVVAGKE+REFLVD
Sbjct: 1   MDCLVLPCYVMKRRRRRSTRPRLGYHRLNKSNVGRLD--GAESSLVKVVAGKEKREFLVD 60

Query: 61  PFVLEENPFRILIEKGGDDDDDGDGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLFKLN 120
           PFVLEENPFRILIEKGGDD++D + DGKRKRVIFVDVD+ILFEHLLWLMYNDCSSLFKLN
Sbjct: 61  PFVLEENPFRILIEKGGDDNEDEEEDGKRKRVIFVDVDSILFEHLLWLMYNDCSSLFKLN 120

Query: 121 VEEILDFYAQDF 133
           VEEILDFYAQDF
Sbjct: 121 VEEILDFYAQDF 130

BLAST of PI0017161 vs. NCBI nr
Match: XP_022931160.1 (uncharacterized protein LOC111437423 [Cucurbita moschata])

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34
Identity = 88/137 (64.23%), Postives = 101/137 (73.72%), Query Frame = 0

Query: 1   MGCLI--LPCYVMKRRRRRSTRPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFL 60
           M CL+  LPCYVMKRRRRR T P L YRRLNKS+           SLV+VV GKER EFL
Sbjct: 1   MDCLVLLLPCYVMKRRRRR-TAPRLPYRRLNKSE-----------SLVRVVVGKERTEFL 60

Query: 61  VDPFVLEENPFRILIEKGGDDDDDGDGDGKRKR---VIFVDVDAILFEHLLWLMYNDCSS 120
           VDPFVLEENPFR+L+EKG  ++      GKR+R   +IFVDVDAILFEH LWL+YND SS
Sbjct: 61  VDPFVLEENPFRVLMEKGRFEEK----QGKRRREEHIIFVDVDAILFEHFLWLIYNDSSS 120

Query: 121 LFKLNVEEILDFYAQDF 133
           L  LN++EIL FY+QDF
Sbjct: 121 LLTLNLDEILHFYSQDF 121

BLAST of PI0017161 vs. TAIR 10
Match: AT2G35290.1 (unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 4.0e-21
Identity = 62/133 (46.62%), Postives = 85/133 (63.91%), Query Frame = 0

Query: 1   MGCLILPCYVMKRRRRRST-RPHLSYRRLNKSDFGRNDIGDAESSLVKVVAGKERREFLV 60
           MGCLI P  VMK RR  S      +YR L +         + E  +++VV GKE++EF+V
Sbjct: 1   MGCLISP--VMKLRRLSSADSRRFAYRNLAE---------NMEDPVIRVVVGKEKKEFMV 60

Query: 61  DPFVLEENPFRILIEKGGDDDDDGDGDGKRKRVIFVD-VDAILFEHLLWLMYNDCSSLFK 120
           +P+VLEE PFR+LI  G   D   +   +  RV+++D VD+ILFEHLLWL+ ND S+   
Sbjct: 61  EPYVLEEYPFRVLI--GSAKDRAKNRLNRTGRVVWLDHVDSILFEHLLWLLRNDASTFSD 120

Query: 121 LNVEEILDFYAQD 132
           L+V EI++FYAQD
Sbjct: 121 LDVLEIIEFYAQD 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E5S14.0e-6189.63Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3CQ484.0e-6189.63uncharacterized protein LOC103503536 OS=Cucumis melo OX=3656 GN=LOC103503536 PE=... [more]
A0A0A0LK598.9e-6191.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902380 PE=4 SV=1[more]
A0A6J1EYP51.1e-3464.23uncharacterized protein LOC111437423 OS=Cucurbita moschata OX=3662 GN=LOC1114374... [more]
A0A6J1K4752.1e-3362.41uncharacterized protein LOC111491030 OS=Cucurbita maxima OX=3661 GN=LOC111491030... [more]
Match NameE-valueIdentityDescription
XP_008465964.18.2e-6189.63PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo][more]
KAA0038583.18.2e-6189.63Auxin responsive SAUR protein [Cucumis melo var. makuwa] >TYK31158.1 Auxin respo... [more]
XP_011652654.11.8e-6091.85auxin-responsive protein SAUR78 [Cucumis sativus] >KGN60396.1 hypothetical prote... [more]
XP_038888374.11.0e-5586.36uncharacterized protein LOC120078224 [Benincasa hispida][more]
XP_022931160.12.3e-3464.23uncharacterized protein LOC111437423 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G35290.14.0e-2146.62unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35296:SF3EXPRESSED PROTEINcoord: 1..131
NoneNo IPR availablePANTHERPTHR35296EXPRESSED PROTEINcoord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017161.1PI0017161.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane