PI0016948 (gene) Melon (PI 482460) v1

Overview
NamePI0016948
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionStress response protein NST1-like
Locationchr05: 17263345 .. 17264145 (+)
RNA-Seq ExpressionPI0016948
SyntenyPI0016948
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATTCATCCAGCCCGAAGAACACAAACATTCAAGTACGCTCCAACGGACCTGAGGTAGAACAAGCTCAATCACAGAGTAGAGATAAACAAATTGCGCCCAGTTACACCCTCCTAAGACATGGTAAAGGGAAGGTGTTGCTGGAACCCATGTCGGACCCTAAACAATTAGCCAATGAGTTAGAAGTAGACATGGATGATAAGAAACGAAAGAGAGAAGTGAAAGAGAAAGAGAAAAAAGCGGCGGAGGAGTGCCGCATGGAAGAAGAGCAAGAACACCAAAGATTCGAGGAACATCGAAGAGCAGAGAGTAAGCATTTGGAAATACACTCCCCACCCAACGAAGTTGCCTTGATTCAAAAGAAGATCAGAGAGAAGCTCTCTAAGGTGTCCTTTGCAAAGATGAAAGAGACAATGGCGGCGTTAAAAACTGTCATTCAACAGAAGGAACAAAAGAAGAAGATGCTCACCCAATTGGATGAGCAGGTTGTGGAGCTCCCAGCGAAGTACAAGGCATTAGGAGGAAAGAAGGATAACTTCGAAGCCTTGGTAGAGGAATTCGAGGATAAGCTAGAGGCGATGAGCCCAATTGATCAACGGCCACCACCTAAGAAACAAAATGAGGTTGCAGGGTTGTCTAAGACAAAGAAAGAAACGGGGGCGTCCAGACCTAAGGAGCCCCTACCTGGCGGCGAAACCAAGGCGAAAGAGCCCTCAATTCACACGATCATAAAAATTGAGAAAGGGCTCTTTCCCTATAATGGCACTCTCCCTGACTTCCTCTACCCGCCGATCTAG

mRNA sequence

ATGGCAAATTCATCCAGCCCGAAGAACACAAACATTCAAGTACGCTCCAACGGACCTGAGGTAGAACAAGCTCAATCACAGAGTAGAGATAAACAAATTGCGCCCAGTTACACCCTCCTAAGACATGGTAAAGGGAAGGTGTTGCTGGAACCCATGTCGGACCCTAAACAATTAGCCAATGAGTTAGAAGTAGACATGGATGATAAGAAACGAAAGAGAGAAGTGAAAGAGAAAGAGAAAAAAGCGGCGGAGGAGTGCCGCATGGAAGAAGAGCAAGAACACCAAAGATTCGAGGAACATCGAAGAGCAGAGAGTAAGCATTTGGAAATACACTCCCCACCCAACGAAGTTGCCTTGATTCAAAAGAAGATCAGAGAGAAGCTCTCTAAGGTGTCCTTTGCAAAGATGAAAGAGACAATGGCGGCGTTAAAAACTGTCATTCAACAGAAGGAACAAAAGAAGAAGATGCTCACCCAATTGGATGAGCAGGTTGTGGAGCTCCCAGCGAAGTACAAGGCATTAGGAGGAAAGAAGGATAACTTCGAAGCCTTGGTAGAGGAATTCGAGGATAAGCTAGAGGCGATGAGCCCAATTGATCAACGGCCACCACCTAAGAAACAAAATGAGGTTGCAGGGTTGTCTAAGACAAAGAAAGAAACGGGGGCGTCCAGACCTAAGGAGCCCCTACCTGGCGGCGAAACCAAGGCGAAAGAGCCCTCAATTCACACGATCATAAAAATTGAGAAAGGGCTCTTTCCCTATAATGGCACTCTCCCTGACTTCCTCTACCCGCCGATCTAG

Coding sequence (CDS)

ATGGCAAATTCATCCAGCCCGAAGAACACAAACATTCAAGTACGCTCCAACGGACCTGAGGTAGAACAAGCTCAATCACAGAGTAGAGATAAACAAATTGCGCCCAGTTACACCCTCCTAAGACATGGTAAAGGGAAGGTGTTGCTGGAACCCATGTCGGACCCTAAACAATTAGCCAATGAGTTAGAAGTAGACATGGATGATAAGAAACGAAAGAGAGAAGTGAAAGAGAAAGAGAAAAAAGCGGCGGAGGAGTGCCGCATGGAAGAAGAGCAAGAACACCAAAGATTCGAGGAACATCGAAGAGCAGAGAGTAAGCATTTGGAAATACACTCCCCACCCAACGAAGTTGCCTTGATTCAAAAGAAGATCAGAGAGAAGCTCTCTAAGGTGTCCTTTGCAAAGATGAAAGAGACAATGGCGGCGTTAAAAACTGTCATTCAACAGAAGGAACAAAAGAAGAAGATGCTCACCCAATTGGATGAGCAGGTTGTGGAGCTCCCAGCGAAGTACAAGGCATTAGGAGGAAAGAAGGATAACTTCGAAGCCTTGGTAGAGGAATTCGAGGATAAGCTAGAGGCGATGAGCCCAATTGATCAACGGCCACCACCTAAGAAACAAAATGAGGTTGCAGGGTTGTCTAAGACAAAGAAAGAAACGGGGGCGTCCAGACCTAAGGAGCCCCTACCTGGCGGCGAAACCAAGGCGAAAGAGCCCTCAATTCACACGATCATAAAAATTGAGAAAGGGCTCTTTCCCTATAATGGCACTCTCCCTGACTTCCTCTACCCGCCGATCTAG

Protein sequence

MANSSSPKNTNIQVRSNGPEVEQAQSQSRDKQIAPSYTLLRHGKGKVLLEPMSDPKQLANELEVDMDDKKRKREVKEKEKKAAEECRMEEEQEHQRFEEHRRAESKHLEIHSPPNEVALIQKKIREKLSKVSFAKMKETMAALKTVIQQKEQKKKMLTQLDEQVVELPAKYKALGGKKDNFEALVEEFEDKLEAMSPIDQRPPPKKQNEVAGLSKTKKETGASRPKEPLPGGETKAKEPSIHTIIKIEKGLFPYNGTLPDFLYPPI
Homology
BLAST of PI0016948 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.2e-09
Identity = 53/169 (31.36%), Postives = 91/169 (53.85%), Query Frame = 0

Query: 100 HRRAESKHLEIHSPPNEVALIQKKIREKLSKVSFAKMKETMAALKTVIQQKEQKKKMLTQ 159
           HR A  K +E     +E    +++ ++K  +    + +E    L  +   K++K++ L  
Sbjct: 113 HREASKKEVERKKVEDEKRKGEERKKQKKDEDRAQRKEEAKTKLAEIQTTKKKKQETLAS 172

Query: 160 LDEQVVELPAKYKALGGKK-DNFEALVEEFEDKLEAMSPIDQRPPPKKQN----EVAGLS 219
           L EQV  +  + K    ++ D  + +VEEF  ++E MSP+  RP P+++     E    S
Sbjct: 173 LSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFPKKS 232

Query: 220 KTKKETGASRPKEPLPGGETKAKEPSIHTIIKIEKGLFPYNGTLPDFLY 264
           K+K++ G SRPK+   G +  A++  +  +IKIEKGL P+N  L +FLY
Sbjct: 233 KSKRKAGTSRPKDIQRGNKMSAQK--LDKLIKIEKGLLPFNDPLLNFLY 279

BLAST of PI0016948 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-07
Identity = 56/181 (30.94%), Postives = 102/181 (56.35%), Query Frame = 0

Query: 88  MEEEQEHQRFEEHRRAESKHLEIHSPPNEVALIQKKIREKLSKVSFAKMKETMAALKTVI 147
           ++ + E  R +++ R ++KHL+  +  N+V +  ++  +K +K   A+++ T        
Sbjct: 83  LKPDMETMRLDDN-RPKNKHLKHEA--NKVLVGHREASKKEAKTKLAEIQTT-------- 142

Query: 148 QQKEQKKKMLTQLDEQVVELPAKYKALGGKK-DNFEALVEEFEDKLEAMSPIDQRPPPKK 207
             K++K++ L  L EQV  +  + K    ++ D  + +VEEF  ++E MSP+  RP P++
Sbjct: 143 --KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEE 202

Query: 208 QN----EVAGLSKTKKETGASRPKEPLPGGETKAKEPSIHTIIKIEKGLFPYNGTLPDFL 264
           +     E    SK+K++ G SRPK+   G +  A++  +  +IKIEKGL P+N  L +FL
Sbjct: 203 KGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQK--LDKLIKIEKGLLPFNDPLLNFL 248

BLAST of PI0016948 vs. ExPASy TrEMBL
Match: A0A5A7TVC2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001110 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.0e-04
Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 0

Query: 158 TQLDEQVVELPAKYKALGGKKDNFEALVEEFEDKLEAMSPIDQRPPPKKQNEV--AGLSK 217
           ++   QV++   K K +  KK      +EE   ++E +SP+     P++   V    L K
Sbjct: 40  SKFSNQVMKYLEKLKMVEKKK------IEECNQEIERISPLKPSLRPEELGLVNATQLKK 99

Query: 218 TKKETGASRPKEPLPGGETKAKEPSIHTIIKIEKGLFPYNGTLPDFLYPPI 267
           +K + G SRPK+      +K     +  +IKIEKGL P+NG L DFLY PI
Sbjct: 100 SKNKAGTSRPKDVQK--RSKMSTQDLDKLIKIEKGLLPFNGHLHDFLYGPI 142

BLAST of PI0016948 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 8.6e-09
Identity = 53/169 (31.36%), Postives = 91/169 (53.85%), Query Frame = 0

Query: 100 HRRAESKHLEIHSPPNEVALIQKKIREKLSKVSFAKMKETMAALKTVIQQKEQKKKMLTQ 159
           HR A  K +E     +E    +++ ++K  +    + +E    L  +   K++K++ L  
Sbjct: 113 HREASKKEVERKKVEDEKRKGEERKKQKKDEDRAQRKEEAKTKLAEIQTTKKKKQETLAS 172

Query: 160 LDEQVVELPAKYKALGGKK-DNFEALVEEFEDKLEAMSPIDQRPPPKKQN----EVAGLS 219
           L EQV  +  + K    ++ D  + +VEEF  ++E MSP+  RP P+++     E    S
Sbjct: 173 LSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFPKKS 232

Query: 220 KTKKETGASRPKEPLPGGETKAKEPSIHTIIKIEKGLFPYNGTLPDFLY 264
           K+K++ G SRPK+   G +  A++  +  +IKIEKGL P+N  L +FLY
Sbjct: 233 KSKRKAGTSRPKDIQRGNKMSAQK--LDKLIKIEKGLLPFNDPLLNFLY 279

BLAST of PI0016948 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 4.7e-07
Identity = 56/181 (30.94%), Postives = 102/181 (56.35%), Query Frame = 0

Query: 88  MEEEQEHQRFEEHRRAESKHLEIHSPPNEVALIQKKIREKLSKVSFAKMKETMAALKTVI 147
           ++ + E  R +++ R ++KHL+  +  N+V +  ++  +K +K   A+++ T        
Sbjct: 83  LKPDMETMRLDDN-RPKNKHLKHEA--NKVLVGHREASKKEAKTKLAEIQTT-------- 142

Query: 148 QQKEQKKKMLTQLDEQVVELPAKYKALGGKK-DNFEALVEEFEDKLEAMSPIDQRPPPKK 207
             K++K++ L  L EQV  +  + K    ++ D  + +VEEF  ++E MSP+  RP P++
Sbjct: 143 --KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEE 202

Query: 208 QN----EVAGLSKTKKETGASRPKEPLPGGETKAKEPSIHTIIKIEKGLFPYNGTLPDFL 264
           +     E    SK+K++ G SRPK+   G +  A++  +  +IKIEKGL P+N  L +FL
Sbjct: 203 KGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQK--LDKLIKIEKGLLPFNDPLLNFL 248

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TBU74.2e-0931.36Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DQE72.3e-0730.94Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TVC29.0e-0435.14Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
KAA0038829.18.6e-0931.36stress response protein NST1-like [Cucumis melo var. makuwa][more]
TYK25768.14.7e-0730.94stress response protein NST1-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..100
NoneNo IPR availableCOILSCoilCoilcoord: 133..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016948.1PI0016948.1mRNA