PI0016658 (gene) Melon (PI 482460) v1

Overview


Name	PI0016658
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RAB GTPase 11C
Location	chr06: 23646602 .. 23649730 (-)
RNA-Seq Expression	PI0016658
Synteny	PI0016658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTCCCTTTCGAAGTTTGCAAACTTATCAAGAAATCATATATTTCTTTTTCTCTTTTGCACATGTATTGAAGACTCCGACTTATAATTCTAGAACCCCGAATACATAATTATTAACTTTAGTCTTCATAACTCAACTTAGGGTTAGCTACAAATACCCATGACCCCAAATACAATTTAGAGGGGGATGAGTTTTGTTGAGATCCAAATATTATATAGGATGAAAGAAGTAATGATTTAGTAAATGAAAGAAATTGTAGAACCCTATTGATAGTGTTTGTATGTGCACACCCACAATGATATGAAATTAAGAAAGAATCCTAAAATTTGGAGGACAAAAAAAGAGATGTTTAGGAAAATTAAGATGTATGAGTTGGCGGTTGGTCGGAAAAGCCCATATCTAGAAGGGCAGTTTCGGCCTTAAAAAAAAATCATTTTGATTTGAAGTCGGCGGAGTCTCCATTTCGTCTTCATATTCAAAGTGGAACAGCCGATTCGATTCCTGAGGAGGAACAACAAAACAAAGTTCTTCAATTTTTGCTTTCCAGATTTGGGAAACCTAAATCTGTAAACCAAATAAACGAAGAACCAGATTAAGAGAGAGAGAGAATACCGGCAAGATATGGCCCGGAGACCTGACGATGACTATGATTATCTTTTCAAAGTTGTGCTAATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTTGAATTCGCTACTCGTACTCTTCAGGTATCTCTCTCTCTCTCCCCTCTTCATTTCTCTCTCATTGTCTCTCAATAGGTATTTATATCTTTGTGGCGTTGTGTGTTTCTATGCTTTGCATTCTCGATCTGTGTGTAAATCTGCATTTGGATTGGTTTTGGAACTCGAATATTTTTTTTAAAAAAAAAGAACAATTTATTTGTTGTAATTCAAGAAATGATCTGTTTTCTCTTTCGGATCTGTGTTCTCAATTGGTTGTTTTGGTTGTGTTTTCATTTTAATTTTGAGTAATGCGGGAAGTTATTCGTTTCTTTACTGATCTGGATTTGGATGATGAATCGAGAAAATTGCCTGTAGATTTGATTAGGGATAACTTTTGATGGGAATTATTCAAATTCCGATCCAAGTATGAGTACGACATTTCATCCTAACTTTTAATGGAGATATATCTGTAGATCATAATTGGTTGTTTTATTGCCATTTAGTTTAGTCTTTAGAACCTTAATACCATACTTTAAAAATACGAATCTGAATTAATGACTCCTTTCCTGGAAATGCAATTATTATTTCAGTTTACCTTTCTTTCATTCCTTCATTTCCATTTTGATTATGCAATTTGACTCTTTCAAAAAATTCGAAAGCAATTCTGAAGAGGACAAGCATTTTACAAATACTTATAAAAAATTAAGAAACATTTACAAATCTAGCCGCAAACGTTGATTTACAATGCAATATGTGGTTGCTTAAATCTCAGTTTCTTGGTCTTTGGTTGATATCTGGGAAGTGTATATAGTTGGTAATATAGTATTCGGTCACACATATACACGTTTTGATAATAGATTTTGGATCTTCTTGGATCGTCTTGTCTTGAAATGGCTATGTTATATTAGTGGCACATTTGTCGAACCAAACAATGCCATAATCTGGATCTATGCAGAATGAGGGAAACTTTTGTTCTATCTGTTCTTATCCTGCTAAAGATGTTGGTTTCATTTTCGTTTGACTCGTAAGCTGAGTTAATGTGGAACACGGTGGTGACTCCTTTCTAGATGACTAAGAACTGTTTGGTTTTTCAGATATCTGTTTGTGAAATTTGATATATGACCTTTTCTTTTTGGCCCTCTCTTTAGAGTTAAATTACAGGCACAAAATTTCATTTTCTGATTTTTGCCTATGAACTTGGTCTTTGTTTTATAAATTCAACAGAACGTTTTGGATATACAAAGAAAACAGCTTTCGATCATTTGTTTACTGCTTTTATCACATTCTAAGCCTTAAGGTGGGATTTGAGGATTCATTGATGAAGAAGGGATTCTTATATTTATTGTTATGCTTTGATTATGAAAGTTATCAAGAAAAAAAAATGCTGCATTGTCTTAGGTCGAAGGAAGAACTGTAAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTATAGGGGTGCACTTGGAGCCCTTTTAGTGTATGATGTAACAAAACCAATGACATTCGACAATGTAAGCCGTTGGTTGAAGGAACTTAGAGACCATGCCGATTCCAACATAGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTACGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGACTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAGATATATCGGATAATCAGTAAAAAATCTCTTAATTCAGAGGAGCCTGCTGCTGCTAATAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAAGCCAATACAAAGAAGGCTTGTTGCTCTTCTTGAAGTTCAACAATTTTTGTAACTCTCTCTCTCTCTCTCTCTTATTTGTCATTTGCTTGTTCATTTCTTTCTAGTTACCAACTCTCTTCTGTTATTTGTTTGCTTTTGGATTATGTTGGTGTATAATTTACATATAATTTATATTTTACTTAGATTTATTATTATTATTATTATTATTATTATTATT

mRNA sequence

TGTTCCCTTTCGAAGTTTGCAAACTTATCAAGAAATCATATATTTCTTTTTCTCTTTTGCACATGTATTGAAGACTCCGACTTATAATTCTAGAACCCCGAATACATAATTATTAACTTTAGTCTTCATAACTCAACTTAGGGTTAGCTACAAATACCCATGACCCCAAATACAATTTAGAGGGGGATGAGTTTTGTTGAGATCCAAATATTATATAGGATGAAAGAAGTAATGATTTAGTAAATGAAAGAAATTGTAGAACCCTATTGATAGTGTTTGTATGTGCACACCCACAATGATATGAAATTAAGAAAGAATCCTAAAATTTGGAGGACAAAAAAAGAGATGTTTAGGAAAATTAAGATGTATGAGTTGGCGGTTGGTCGGAAAAGCCCATATCTAGAAGGGCAGTTTCGGCCTTAAAAAAAAATCATTTTGATTTGAAGTCGGCGGAGTCTCCATTTCGTCTTCATATTCAAAGTGGAACAGCCGATTCGATTCCTGAGGAGGAACAACAAAACAAAGTTCTTCAATTTTTGCTTTCCAGATTTGGGAAACCTAAATCTGTAAACCAAATAAACGAAGAACCAGATTAAGAGAGAGAGAGAATACCGGCAAGATATGGCCCGGAGACCTGACGATGACTATGATTATCTTTTCAAAGTTGTGCTAATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTTGAATTCGCTACTCGTACTCTTCAGGTCGAAGGAAGAACTGTAAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTATAGGGGTGCACTTGGAGCCCTTTTAGTGTATGATGTAACAAAACCAATGACATTCGACAATGTAAGCCGTTGGTTGAAGGAACTTAGAGACCATGCCGATTCCAACATAGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTACGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGACTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAGATATATCGGATAATCAGTAAAAAATCTCTTAATTCAGAGGAGCCTGCTGCTGCTAATAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAAGCCAATACAAAGAAGGCTTGTTGCTCTTCTTGAAGTTCAACAATTTTTGTAACTCTCTCTCTCTCTCTCTCTTATTTGTCATTTGCTTGTTCATTTCTTTCTAGTTACCAACTCTCTTCTGTTATTTGTTTGCTTTTGGATTATGTTGGTGTATAATTTACATATAATTTATATTTTACTTAGATTTATTATTATTATTATTATTATTATTATTATT

Coding sequence (CDS)

ATGGCCCGGAGACCTGACGATGACTATGATTATCTTTTCAAAGTTGTGCTAATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTTGAATTCGCTACTCGTACTCTTCAGGTCGAAGGAAGAACTGTAAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTATAGGGGTGCACTTGGAGCCCTTTTAGTGTATGATGTAACAAAACCAATGACATTCGACAATGTAAGCCGTTGGTTGAAGGAACTTAGAGACCATGCCGATTCCAACATAGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTACGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGACTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAGATATATCGGATAATCAGTAAAAAATCTCTTAATTCAGAGGAGCCTGCTGCTGCTAATAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAAGCCAATACAAAGAAGGCTTGTTGCTCTTCTTGA

Protein sequence

MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS

Homology

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BLAST of PI0016658 vs. ExPASy Swiss-Prot
Match: O04486 (Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 7.8e-104
Identity = 194/216 (89.81%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTI-VVGESEANTKKACCSS 216
           S++S++  A  NIKEG+TI V   SE+N KK CCSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of PI0016658 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 334.3 bits (856), Expect = 9.9e-91
Identity = 169/217 (77.88%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPAAANNI--KEGKTIVVGESEANTKKACCSS 216
           +L ++E AAAN+    +G TI V ++    K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of PI0016658 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.3e-90
Identity = 167/215 (77.67%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLSF+ETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           +L ++E A++N   +G TI V ++ AN +++CCS+
Sbjct: 181 ALAAQE-ASSNLPGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of PI0016658 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 8.4e-90
Identity = 164/216 (75.93%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLRAV+ +D  + +EKEGLSF+ETSALEATN+EKAFQTIL+EIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 SLNSEEPAAANNIK-EGKTIVVGESEANTKKACCSS 216
           +L ++E  A  ++  +G TI V ++  NTKK CCS+
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216

[Close]

BLAST of PI0016658 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 330.5 bits (846), Expect = 1.4e-89
Identity = 167/215 (77.67%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           +L ++E AA N   +G  I + +S A  +K CCS+
Sbjct: 181 ALAAQE-AAGNLPGQGTAINISDSSATNRKGCCST 214

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BLAST of PI0016658 vs. ExPASy TrEMBL
Match: A0A0A0L6P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.6e-114
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 215

[Close]

BLAST of PI0016658 vs. ExPASy TrEMBL
Match: A0A1S3BTD1 (ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNSEEP+AANNIKEGKTIVVGESEANTKKACCSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSS 215

[Close]

BLAST of PI0016658 vs. ExPASy TrEMBL
Match: A0A6J1EU78 (ras-related protein RABA2a OS=Cucurbita moschata OX=3662 GN=LOC111435963 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEP-AAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNSEEP AAA NIKEGKTIVVGESEAN+KK CCSS
Sbjct: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSS 216

[Close]

BLAST of PI0016658 vs. ExPASy TrEMBL
Match: A0A6J1C4Z3 (ras-related protein RABA2a OS=Momordica charantia OX=3673 GN=LOC111008523 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.4e-110
Identity = 208/215 (96.74%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNS EPAAA++IKEGKTIVVGESEANTKK+CCSS
Sbjct: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSS 215

[Close]

BLAST of PI0016658 vs. ExPASy TrEMBL
Match: A0A6J1J221 (ras-related protein RABA2a OS=Cucurbita maxima OX=3661 GN=LOC111482705 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.8e-110
Identity = 211/216 (97.69%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEP-AAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNSEEP AAA NIKEGK IVVGESEAN+KK CCSS
Sbjct: 181 SLNSEEPAAAAANIKEGKAIVVGESEANSKKPCCSS 216

[Close]

BLAST of PI0016658 vs. NCBI nr
Match: XP_004133721.1 (ras-related protein RABA2a [Cucumis sativus] >XP_031739127.1 ras-related protein RABA2a [Cucumis sativus] >KGN56262.1 hypothetical protein Csa_009772 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 215

[Close]

BLAST of PI0016658 vs. NCBI nr
Match: XP_008452243.1 (PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 3.0e-113
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNSEEP+AANNIKEGKTIVVGESEANTKKACCSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSS 215

[Close]

BLAST of PI0016658 vs. NCBI nr
Match: XP_038905598.1 (ras-related protein RABA2a [Benincasa hispida])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNSEEPAAA NIKEGKTIVVGESEANTKKACCSS
Sbjct: 181 SLNSEEPAAA-NIKEGKTIVVGESEANTKKACCSS 214

[Close]

BLAST of PI0016658 vs. NCBI nr
Match: XP_023517501.1 (ras-related protein RABA2a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 209/215 (97.21%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNS+EPAAA NIKEGK+IVVGESEAN+KKACCSS
Sbjct: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSS 215

[Close]

BLAST of PI0016658 vs. NCBI nr
Match: XP_022929370.1 (ras-related protein RABA2a [Cucurbita moschata] >XP_023552907.1 ras-related protein RABA2a [Cucurbita pepo subsp. pepo] >KAG7015452.1 Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.7 bits (1049), Expect = 3.2e-110
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEP-AAANNIKEGKTIVVGESEANTKKACCSS 216
           SLNSEEP AAA NIKEGKTIVVGESEAN+KK CCSS
Sbjct: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSS 216

[Close]

BLAST of PI0016658 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 377.9 bits (969), Expect = 5.5e-105
Identity = 194/216 (89.81%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTI-VVGESEANTKKACCSS 216
           S++S++  A  NIKEG+TI V   SE+N KK CCSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of PI0016658 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 334.3 bits (856), Expect = 7.0e-92
Identity = 169/217 (77.88%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPAAANNI--KEGKTIVVGESEANTKKACCSS 216
           +L ++E AAAN+    +G TI V ++    K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of PI0016658 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-90
Identity = 167/215 (77.67%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSS 216
           +L ++E AA N   +G  I + +S A  +K CCS+
Sbjct: 181 ALAAQE-AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of PI0016658 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 328.6 bits (841), Expect = 3.9e-90
Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSEEPAAANNI--KEGKTIVVGESEANTKKACCSS 216
           +L ++E AAAN+    +G TI V ++    K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of PI0016658 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 296.2 bits (757), Expect = 2.1e-80
Identity = 151/218 (69.27%), Postives = 184/218 (84.40%), Query Frame = 0


Query: 2   ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
           A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ + V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
            +GNK DL+HLRAV+TEDA+++AE+E   F+ETSALE+ NVE AF  +LS+IYR++S+K+
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LN-SEEPAAANNIKEGKTIVVGESE---ANTKKACCSS 216
           L+  ++PAA   + +G+TI VG  +   A  K  CCS+
Sbjct: 183 LDIGDDPAA---LPKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of PI0016658 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04486	7.8e-104	89.81	Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1	[more]
Q96283	9.9e-91	77.88	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]
Q39434	1.3e-90	77.67	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q40193	8.4e-90	75.93	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q9LNW1	1.4e-89	77.67	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]

BLAST of PI0016658 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6P8	6.6e-114	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1	[more]
A0A1S3BTD1	1.5e-113	99.53	ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1	[more]
A0A6J1EU78	1.5e-110	98.15	ras-related protein RABA2a OS=Cucurbita moschata OX=3662 GN=LOC111435963 PE=4 SV...	[more]
A0A6J1C4Z3	3.4e-110	96.74	ras-related protein RABA2a OS=Momordica charantia OX=3673 GN=LOC111008523 PE=4 S...	[more]
A0A6J1J221	5.8e-110	97.69	ras-related protein RABA2a OS=Cucurbita maxima OX=3661 GN=LOC111482705 PE=4 SV=1	[more]

BLAST of PI0016658 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133721.1	1.4e-113	100.00	ras-related protein RABA2a [Cucumis sativus] >XP_031739127.1 ras-related protein...	[more]
XP_008452243.1	3.0e-113	99.53	PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ...	[more]
XP_038905598.1	2.2e-111	99.07	ras-related protein RABA2a [Benincasa hispida]	[more]
XP_023517501.1	2.4e-110	97.21	ras-related protein RABA2a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022929370.1	3.2e-110	98.15	ras-related protein RABA2a [Cucurbita moschata] >XP_023552907.1 ras-related prot...	[more]

BLAST of PI0016658 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09630.1	5.5e-105	89.81	RAB GTPase 11C	[more]
AT3G46830.1	7.0e-92	77.88	RAB GTPase homolog A2C	[more]
AT1G07410.1	1.0e-90	77.67	RAB GTPase homolog A2B	[more]
AT5G59150.1	3.9e-90	76.50	RAB GTPase homolog A2D	[more]
AT5G60860.1	2.1e-80	69.27	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 116..129 score: 50.58 coord: 13..34 score: 55.2 coord: 151..173 score: 43.68 coord: 54..76 score: 52.08 coord: 36..52 score: 36.23
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 2.7E-112 score: 389.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 5.6E-27 score: 105.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..215 e-value: 5.2E-7 score: 39.3
None	No IPR available	PANTHER	PTHR47979:SF18	RAS-RELATED PROTEIN YPTC6	coord: 1..214
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..214
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..213 score: 36.663479
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..174 score: 9.164656
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 1.31682E-129 score: 359.952
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 7.2E-12 score: 32.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..174 e-value: 1.1E-61 score: 207.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..215 score: 17.198099
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..213 e-value: 5.4E-75 score: 253.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..183
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..170 e-value: 9.1E-41 score: 137.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016658.2	PI0016658.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding