PI0016626 (gene) Melon (PI 482460) v1

Overview


Name	PI0016626
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr01: 4123032 .. 4124908 (-)
RNA-Seq Expression	PI0016626
Synteny	PI0016626

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGTTCAGTGCGACGGGTTCCTCCGATCGCCTATATAAGTGGCCAAAAGGACAGTGAATTGGTCGAATCAAGACGAGCTGATCATCAATCTTCATCAATCTTTACCATCTCTACAATTCCACTATTTTCTTCAATCCTTTCCCTTTTCGATCCTACTTTCTCTTGTATTTTCTCTGCTCTCGAGTACTAAAAGCAATTGAAGTAAGTTTTCGTTAATCCCTTTTCGTGTTCATTTCTTTTCTGAAAGAAATGTTCGCTTTCCTCTAATGGGTTTGGTTTAGTTTCTGAATTTGGTAAAGGAAACGATTCTTTGAGCATTTCAGTTTCATAAATTTCTCTTCTTTTTCACTGGTAGACTGTGAACTTACTTTGACCATCAGTGGATTATTGTTCTCTATCATGTTTGAGGATGGAGGAGGGTTTTCCATTTTTACTGAAACTTGTGTGGTTTTAATCTCTCAAGAGTGTTTTCAGGAATGTTACGAGGATTTGTTGTTCTTGGGTTTTTAGACTGTTGAAATTTCTCTATGTGCCTGGTGGAAGATTTTGTAATTGGATCTTTAGCCATAGGGTTTACTTTTACAGAAATCTATTCTTGAATGGCAGGTGGATCACGATTCATGTGATAAATTGTCATTTCATATACTTTAATGGAACTAAATGAACTCCCTTCTGTTTTTCCTCAGTTTCTGCTCCTGTGGATCTCTATTGGTTATGGAAATTTCATTAATTAGTTGCTTAGTTCATTTTCTTTCCTGACGATTTATTCATGAACTTCAGTTTAGTACAGTTATTTATTACATGGTTCATTAAAAAAAAAAAAAAGCGAGAGGTTCTTAGTTGTTTGTTTACTTTTGTTTCAGCTCTGATGTGAAGAAAGGCTTGCTTGCAAATTACAACCTCTAAATCATTGTGTATTTCTGATCAATCTGCTAATTTTATTCCGGCTGTACCGACTGAGTTTGTGTAGTTTGCTTTAAACACGATGGGTCTCTCCAGTCTCCCAGCTCCGTCTGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCACTATCCATTTCCATGTTCAAATGCATTGTTCGTTTAATCCTTCACATGGTAGGTATCCGTCTCTCATGGCCATCATCAGTAGCACCATCAACAGATTCCTTTGAAAGTTCCTCAGAGTTGGGAGATTCCAATTTTGGCTCCTCTTGGAATTACCTTGAGACGTTTCGGAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGCGATAAATCACTTATCTTGTGGCCATCTTTTTCACACGGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGAGAAATCTTGCTTTTGGTGAGTGTTTAGTGTGCTAGAAATCTAGTTACGGGAAAACTCATGTACAGCATACTCTTAAAGATAATCGTGAGCGCATATCCTACCTCCGTCGTGTATGACATTTGAAGTTTGATGTGTCTGACTGGTCTTAGAGACCAAAGTTTTGTCACTGTAAATACATGTTTATGAAGTTTTATGCTTCTGGCTTGTGCCTTTAGCTTTGAGTTAATGCAATGTTACTTCACTTTCTTTGTATATGGAATTCCCTGAGTATGCTACAAAGTTTTTCAGCTTCTGTTTGTTTGATATTGGGGTTGACAGTATGGAAATCAATTTCCTGAAATTATTGTTTTAATTGATGTGTTGGGGATTGCTCCAATCTTGGTGTCAACTTATATGCTATATCTTGTAAGTTTTTTTATGTCGAATACTGTTAGTCTATCGAGC

mRNA sequence

GTGAGTTCAGTGCGACGGGTTCCTCCGATCGCCTATATAAGTGGCCAAAAGGACAGTGAATTGGTCGAATCAAGACGAGCTGATCATCAATCTTCATCAATCTTTACCATCTCTACAATTCCACTATTTTCTTCAATCCTTTCCCTTTTCGATCCTACTTTCTCTTGTATTTTCTCTGCTCTCGAGTACTAAAAGCAATTGAACTCTGATGTGAAGAAAGGCTTGCTTGCAAATTACAACCTCTAAATCATTGTGTATTTCTGATCAATCTGCTAATTTTATTCCGGCTGTACCGACTGAGTTTGTGTAGTTTGCTTTAAACACGATGGGTCTCTCCAGTCTCCCAGCTCCGTCTGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCACTATCCATTTCCATGTTCAAATGCATTGTTCGTTTAATCCTTCACATGGTAGGTATCCGTCTCTCATGGCCATCATCAGTAGCACCATCAACAGATTCCTTTGAAAGTTCCTCAGAGTTGGGAGATTCCAATTTTGGCTCCTCTTGGAATTACCTTGAGACGTTTCGGAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGCGATAAATCACTTATCTTGTGGCCATCTTTTTCACACGGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGAGAAATCTTGCTTTTGGTGAGTGTTTAGTGTGCTAGAAATCTAGTTACGGGAAAACTCATGTACAGCATACTCTTAAAGATAATCGTGAGCGCATATCCTACCTCCGTCGTGTATGACATTTGAAGTTTGATGTGTCTGACTGGTCTTAGAGACCAAAGTTTTGTCACTGTAAATACATGTTTATGAAGTTTTATGCTTCTGGCTTGTGCCTTTAGCTTTGAGTTAATGCAATGTTACTTCACTTTCTTTGTATATGGAATTCCCTGAGTATGCTACAAAGTTTTTCAGCTTCTGTTTGTTTGATATTGGGGTTGACAGTATGGAAATCAATTTCCTGAAATTATTGTTTTAATTGATGTGTTGGGGATTGCTCCAATCTTGGTGTCAACTTATATGCTATATCTTGTAAGTTTTTTTATGTCGAATACTGTTAGTCTATCGAGC

Coding sequence (CDS)

ATGGGTCTCTCCAGTCTCCCAGCTCCGTCTGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCACTATCCATTTCCATGTTCAAATGCATTGTTCGTTTAATCCTTCACATGGTAGGTATCCGTCTCTCATGGCCATCATCAGTAGCACCATCAACAGATTCCTTTGAAAGTTCCTCAGAGTTGGGAGATTCCAATTTTGGCTCCTCTTGGAATTACCTTGAGACGTTTCGGAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGCGATAAATCACTTATCTTGTGGCCATCTTTTTCACACGGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGAGAAATCTTGCTTTTGGTGA

Protein sequence

MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSSELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

Homology

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BLAST of PI0016626 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-38
Identity = 87/150 (58.00%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPS----TDSF 60
           MGLSSLP PSEG+L VILVNTALSIS+ K IVR  L +VGI LS PSS +PS    +   
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLS-PSSSSPSSVTVSSEN 60

Query: 61  ESSSELGDSNFGSSWNYLETFRNRYPRIRFDKV-QSSERREHDCSVCLTQFEPESAINHL 120
            S+SE  D       +YLE FRNR P +RF+ + +  ++ +++CSVCL++F+ +S IN L
Sbjct: 61  SSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKL 120

Query: 121 SCGHLFHTECLEKWLDYWNITCPLCRTPLM 146
            CGHLFH  CLEKW+DYWNITCPLCRTPL+
Sbjct: 121 KCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149

[Close]

BLAST of PI0016626 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 78  RNRYPRIRFDKV-QSSERREHDCSVCLTQFEPESAINHL-SCGHLFHTECLEKWLDYWNI 137
           R   P I+F+++  S E    +C+VCL +FE E  I  L +C H+FH  CL++W+D+   
Sbjct: 72  REILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQK 131

Query: 138 TCPLCRTPLMSEEEKSCF 154
           TCPLCRTP + +E +  F
Sbjct: 132 TCPLCRTPFVPDEMQEEF 149

[Close]

BLAST of PI0016626 vs. ExPASy Swiss-Prot
Match: Q9LY41 (E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 4   SSLPAPSEGVLNVILV-NTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSSEL 63
           SSL +    VL +IL+    L IS+  C +   L+    R   P S + S  +  S S  
Sbjct: 19  SSLDSLKPSVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRR 78

Query: 64  GDSNFGSSWNYLETFRNRYPRIRFDKV--QSSERREHDCSVCLTQFEPESAINHLS-CGH 123
              +  S      +  +  P  +F  V  +SS     DC+VCL++FEPE  +  L  C H
Sbjct: 79  FSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCH 138

Query: 124 LFHTECLEKWLDYWNITCPLCRTPLMSEE 149
            FH +C++ WL   N TCPLCR+PL + E
Sbjct: 139 AFHADCIDIWL-VSNQTCPLCRSPLFASE 166

[Close]

BLAST of PI0016626 vs. ExPASy Swiss-Prot
Match: Q9ZT50 (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.0e-10
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 98  DCSVCLTQFEPESAINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEE 149
           DC VCL++ +    +  L C H+FH +CLE WL  +N TCPLCR+ L+S++
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135

[Close]

BLAST of PI0016626 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 92  SERREHDCSVCLTQFEPESAINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM 146
           S+    DC VCL++ +    +  L C H+FH +CLE WL + N  CPLCR+PL+
Sbjct: 67  SDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120

[Close]

BLAST of PI0016626 vs. ExPASy TrEMBL
Match: A0A1S4E4A9 (probable E3 ubiquitin-protein ligase XERICO isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500498 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.8e-80
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPSSV  STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDSNFGSSWNYLE FRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 155
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]

BLAST of PI0016626 vs. ExPASy TrEMBL
Match: A0A1S3CGH9 (probable E3 ubiquitin-protein ligase XERICO isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500498 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.8e-80
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPSSV  STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDSNFGSSWNYLE FRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 155
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]

BLAST of PI0016626 vs. ExPASy TrEMBL
Match: A0A5D3D707 (Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00210 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+FKCIVRLILHMVGIRLSWPSSV PSTDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD  FGSSWNYL+ FRNRYPRIRFDKVQSSERREHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of PI0016626 vs. ExPASy TrEMBL
Match: A0A1S3CFW8 (probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103500499 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+FKCIVRLILHMVGIRLSWPSSV PSTDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD  FGSSWNYL+ FRNRYPRIRFDKVQSSERREHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of PI0016626 vs. ExPASy TrEMBL
Match: A0A5A7UYD7 (Putative E3 ubiquitin-protein ligase XERICO isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00230 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78
Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPSSV  STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDSNFGSSWNYLE FRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of PI0016626 vs. NCBI nr
Match: XP_008462031.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPSSV  STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDSNFGSSWNYLE FRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 155
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]

BLAST of PI0016626 vs. NCBI nr
Match: XP_016902815.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X3 [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPSSV  STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDSNFGSSWNYLE FRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 155
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]

BLAST of PI0016626 vs. NCBI nr
Match: XP_008462033.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+FKCIVRLILHMVGIRLSWPSSV PSTDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD  FGSSWNYL+ FRNRYPRIRFDKVQSSERREHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of PI0016626 vs. NCBI nr
Match: TYK19302.1 (putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+FKCIVRLILHMVGIRLSWPSSV PSTDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD  FGSSWNYL+ FRNRYPRIRFDKVQSSERREHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of PI0016626 vs. NCBI nr
Match: KAA0059216.1 (putative E3 ubiquitin-protein ligase XERICO isoform X2 [Cucumis melo var. makuwa] >TYK19304.1 putative E3 ubiquitin-protein ligase XERICO isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 302.0 bits (772), Expect = 3.0e-78
Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPSSV  STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDSNFGSSWNYLE FRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of PI0016626 vs. TAIR 10
Match: AT2G04240.1 (RING/U-box superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-39
Identity = 87/150 (58.00%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPS----TDSF 60
           MGLSSLP PSEG+L VILVNTALSIS+ K IVR  L +VGI LS PSS +PS    +   
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLS-PSSSSPSSVTVSSEN 60

Query: 61  ESSSELGDSNFGSSWNYLETFRNRYPRIRFDKV-QSSERREHDCSVCLTQFEPESAINHL 120
            S+SE  D       +YLE FRNR P +RF+ + +  ++ +++CSVCL++F+ +S IN L
Sbjct: 61  SSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKL 120

Query: 121 SCGHLFHTECLEKWLDYWNITCPLCRTPLM 146
            CGHLFH  CLEKW+DYWNITCPLCRTPL+
Sbjct: 121 KCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149

[Close]

BLAST of PI0016626 vs. TAIR 10
Match: AT2G04240.2 (RING/U-box superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-39
Identity = 87/150 (58.00%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPS----TDSF 60
           MGLSSLP PSEG+L VILVNTALSIS+ K IVR  L +VGI LS PSS +PS    +   
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLS-PSSSSPSSVTVSSEN 60

Query: 61  ESSSELGDSNFGSSWNYLETFRNRYPRIRFDKV-QSSERREHDCSVCLTQFEPESAINHL 120
            S+SE  D       +YLE FRNR P +RF+ + +  ++ +++CSVCL++F+ +S IN L
Sbjct: 61  SSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKL 120

Query: 121 SCGHLFHTECLEKWLDYWNITCPLCRTPLM 146
            CGHLFH  CLEKW+DYWNITCPLCRTPL+
Sbjct: 121 KCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149

[Close]

BLAST of PI0016626 vs. TAIR 10
Match: AT1G67856.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 47/145 (32.41%), Postives = 79/145 (54.48%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSS 60
           MG+S  P  SEGV+ ++++NT +S+S+ K +VR +++MV            S+++ E+ +
Sbjct: 1   MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMV------------SSETNEARN 60

Query: 61  ELGDSNFGSSWNYLETFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESAINHL-SCGH 120
           +  D +   S          +  +  ++   +ER   DC VCL  F+ E  ++ L SC H
Sbjct: 61  KEDDQDHEDSKRRRRISITHFESLCENRGSRNEREAMDCCVCLCGFKEEEEVSELVSCKH 120

Query: 121 LFHTECLEKWLDYWNITCPLCRTPL 145
            FH+ CL+KW    + TCPLCR+ L
Sbjct: 121 YFHSACLDKWFGNNHTTCPLCRSIL 133

[Close]

BLAST of PI0016626 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 78  RNRYPRIRFDKV-QSSERREHDCSVCLTQFEPESAINHL-SCGHLFHTECLEKWLDYWNI 137
           R   P I+F+++  S E    +C+VCL +FE E  I  L +C H+FH  CL++W+D+   
Sbjct: 72  REILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQK 131

Query: 138 TCPLCRTPLMSEEEKSCF 154
           TCPLCRTP + +E +  F
Sbjct: 132 TCPLCRTPFVPDEMQEEF 149

[Close]

BLAST of PI0016626 vs. TAIR 10
Match: AT3G60220.1 (TOXICOS EN LEVADURA 4 )

HSP 1 Score: 67.8 bits (164), Expect = 8.8e-12
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 4   SSLPAPSEGVLNVILV-NTALSISMFKCIVRLILHMVGIRLSWPSSVAPSTDSFESSSEL 63
           SSL +    VL +IL+    L IS+  C +   L+    R   P S + S  +  S S  
Sbjct: 19  SSLDSLKPSVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRR 78

Query: 64  GDSNFGSSWNYLETFRNRYPRIRFDKV--QSSERREHDCSVCLTQFEPESAINHLS-CGH 123
              +  S      +  +  P  +F  V  +SS     DC+VCL++FEPE  +  L  C H
Sbjct: 79  FSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCH 138

Query: 124 LFHTECLEKWLDYWNITCPLCRTPLMSEE 149
            FH +C++ WL   N TCPLCR+PL + E
Sbjct: 139 AFHADCIDIWL-VSNQTCPLCRSPLFASE 166

The following BLAST results are available for this feature:

BLAST of PI0016626 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SI09	1.8e-38	58.00	Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=X...	[more]
Q9XF92	1.5e-11	42.31	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q9LY41	1.2e-10	34.23	E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV...	[more]
Q9ZT50	8.0e-10	47.06	E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 ...	[more]
Q9ZU51	1.4e-09	44.44	E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ...	[more]

BLAST of PI0016626 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4A9	5.8e-80	94.81	probable E3 ubiquitin-protein ligase XERICO isoform X3 OS=Cucumis melo OX=3656 G...	[more]
A0A1S3CGH9	5.8e-80	94.81	probable E3 ubiquitin-protein ligase XERICO isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A5D3D707	1.7e-79	95.42	Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CFW8	1.7e-79	95.42	probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103500...	[more]
A0A5A7UYD7	1.4e-78	94.77	Putative E3 ubiquitin-protein ligase XERICO isoform X2 OS=Cucumis melo var. maku...	[more]

BLAST of PI0016626 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462031.1	1.2e-79	94.81	PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis melo]	[more]
XP_016902815.1	1.2e-79	94.81	PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X3 [Cucumis melo]	[more]
XP_008462033.1	3.5e-79	95.42	PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo]	[more]
TYK19302.1	3.5e-79	95.42	putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa]	[more]
KAA0059216.1	3.0e-78	94.77	putative E3 ubiquitin-protein ligase XERICO isoform X2 [Cucumis melo var. makuwa...	[more]

BLAST of PI0016626 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04240.1	1.3e-39	58.00	RING/U-box superfamily protein	[more]
AT2G04240.2	1.3e-39	58.00	RING/U-box superfamily protein	[more]
AT1G67856.1	1.7e-15	32.41	RING/U-box superfamily protein	[more]
AT3G61460.1	1.0e-12	42.31	brassinosteroid-responsive RING-H2	[more]
AT3G60220.1	8.8e-12	34.23	TOXICOS EN LEVADURA 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 99..140 e-value: 1.2E-5 score: 34.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 98..141 e-value: 3.7E-11 score: 43.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 99..141 score: 13.035139
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 69..146 e-value: 9.7E-19 score: 68.8
None	No IPR available	PANTHER	PTHR47258:SF1	E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED	coord: 1..154
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 91..145
IPR044249	Probable E3 ubiquitin-protein ligase XERICO-like	PANTHER	PTHR47258	FAMILY NOT NAMED	coord: 1..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016626.1	PI0016626.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane