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PI0016539 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGCTCTTGCACGTTACTCGCCTCCATCCTTACTGCTTCCACCATGGCTTTCTCCGCTTCTTCCTTCTCCTCTAATGGAGATCGCGACCTCCCTCTCATCAGGTATTATCTTCGTCTCCTTTAATTTTGAATGTTTCTTTTTTGATTTCGAGGAATCCCGATGAACTAATCGAGTTTTTTTCTTTGGTTTGGTGAATTGTGTTTCTTTCTAGGGTTTTGTTTCAGAATCTGGTGCGAATAGAGGTTGGGGTGCGAATTCTTCATTAGAGAAGGAGAAATTTGTGCCGAGGTTTTATGGATTGAGATTCATTGAAACTTTGGTAAATGCTCATAGATAA ATGAAAGGCTCTTGCACGTTACTCGCCTCCATCCTTACTGCTTCCACCATGGCTTTCTCCGCTTCTTCCTTCTCCTCTAATGGAGATCGCGACCTCCCTCTCATCAGGTATTATCTTCAATCTGGTGCGAATAGAGGTTGGGGTGCGAATTCTTCATTAGAGAAGGAGAAATTTGTGCCGAGGTTTTATGGATTGAGATTCATTGAAACTTTGGTAAATGCTCATAGATAA ATGAAAGGCTCTTGCACGTTACTCGCCTCCATCCTTACTGCTTCCACCATGGCTTTCTCCGCTTCTTCCTTCTCCTCTAATGGAGATCGCGACCTCCCTCTCATCAGGTATTATCTTCAATCTGGTGCGAATAGAGGTTGGGGTGCGAATTCTTCATTAGAGAAGGAGAAATTTGTGCCGAGGTTTTATGGATTGAGATTCATTGAAACTTTGGTAAATGCTCATAGATAA MKGSCTLLASILTASTMAFSASSFSSNGDRDLPLIRYYLQSGANRGWGANSSLEKEKFVPRFYGLRFIETLVNAHR Homology
BLAST of PI0016539 vs. ExPASy TrEMBL
Match: A0A1S3AU25 (uncharacterized protein LOC103482871 OS=Cucumis melo OX=3656 GN=LOC103482871 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.2e-19 Identity = 59/81 (72.84%), Postives = 64/81 (79.01%), Query Frame = 0
BLAST of PI0016539 vs. ExPASy TrEMBL
Match: A0A0A0KQK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146940 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19 Identity = 59/84 (70.24%), Postives = 65/84 (77.38%), Query Frame = 0
BLAST of PI0016539 vs. ExPASy TrEMBL
Match: A0A5A7TMP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001410 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.3e-19 Identity = 60/91 (65.93%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of PI0016539 vs. ExPASy TrEMBL
Match: A0A6J1HZR1 (uncharacterized protein LOC111469110 OS=Cucurbita maxima OX=3661 GN=LOC111469110 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.1e-18 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of PI0016539 vs. ExPASy TrEMBL
Match: A0A6J1ET49 (uncharacterized protein LOC111435756 OS=Cucurbita moschata OX=3662 GN=LOC111435756 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.1e-18 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of PI0016539 vs. NCBI nr
Match: XP_008437456.1 (PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo]) HSP 1 Score: 104.4 bits (259), Expect = 4.5e-19 Identity = 59/81 (72.84%), Postives = 64/81 (79.01%), Query Frame = 0
BLAST of PI0016539 vs. NCBI nr
Match: KAA0042639.1 (uncharacterized protein E6C27_scaffold44G001370 [Cucumis melo var. makuwa] >TYK06040.1 uncharacterized protein E5676_scaffold376G001410 [Cucumis melo var. makuwa]) HSP 1 Score: 102.8 bits (255), Expect = 1.3e-18 Identity = 60/91 (65.93%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of PI0016539 vs. NCBI nr
Match: XP_022929045.1 (uncharacterized protein LOC111435756 [Cucurbita moschata] >XP_022970121.1 uncharacterized protein LOC111469110 [Cucurbita maxima] >KAG7017053.1 hypothetical protein SDJN02_22165 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102.1 bits (253), Expect = 2.2e-18 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of PI0016539 vs. NCBI nr
Match: XP_023520500.1 (uncharacterized protein LOC111783920 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 100.9 bits (250), Expect = 5.0e-18 Identity = 55/81 (67.90%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of PI0016539 vs. NCBI nr
Match: KAG7035524.1 (hypothetical protein SDJN02_02320 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 98.2 bits (243), Expect = 3.2e-17 Identity = 55/81 (67.90%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of PI0016539 vs. TAIR 10
Match: AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 2.3e-05 Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 0
BLAST of PI0016539 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 3.9e-05 Identity = 33/80 (41.25%), Postives = 43/80 (53.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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