PI0016409 (gene) Melon (PI 482460) v1

Overview
NamePI0016409
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 4218307 .. 4218646 (+)
RNA-Seq ExpressionPI0016409
SyntenyPI0016409
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACTCAGAAGCTTTTTACTTTGTCCATTGCCGCCGTGGTCCTATTTTCTTGTTTTGTCTCATCGAGTATTATTCTATCTCTCAACTATTGTAATTTCATAATGTATTTTTCTTTGTTATTTTAAACTTAACGAAGTATTTATTAATATGCTAATTCTTTGTCACATGGCAGTAGAGGAAGATGATCTATGGAACTGTGTTATACCATGTTCTAATCACAACGAAGATCTTTTGTGTAATACTGAATGCATCGAACAAGACCAAGGCGCTGGATTTTGTGTTCCCAAATTACCTGGCATTTCTGATAAAAAAGTTTGTTGTTGCAATAATGGATGA

mRNA sequence

ATGGGAACTCAGAAGCTTTTTACTTTGTCCATTGCCGCCGTGGTCCTATTTTCTTGTTTTGTCTCATCGATAGAGGAAGATGATCTATGGAACTGTGTTATACCATGTTCTAATCACAACGAAGATCTTTTGTGTAATACTGAATGCATCGAACAAGACCAAGGCGCTGGATTTTGTGTTCCCAAATTACCTGGCATTTCTGATAAAAAAGTTTGTTGTTGCAATAATGGATGA

Coding sequence (CDS)

ATGGGAACTCAGAAGCTTTTTACTTTGTCCATTGCCGCCGTGGTCCTATTTTCTTGTTTTGTCTCATCGATAGAGGAAGATGATCTATGGAACTGTGTTATACCATGTTCTAATCACAACGAAGATCTTTTGTGTAATACTGAATGCATCGAACAAGACCAAGGCGCTGGATTTTGTGTTCCCAAATTACCTGGCATTTCTGATAAAAAAGTTTGTTGTTGCAATAATGGATGA

Protein sequence

MGTQKLFTLSIAAVVLFSCFVSSIEEDDLWNCVIPCSNHNEDLLCNTECIEQDQGAGFCVPKLPGISDKKVCCCNNG
Homology
BLAST of PI0016409 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-29
Identity = 60/77 (77.92%), Postives = 66/77 (85.71%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDLWNCVIPCSNHNEDLLCNTECIEQDQGAGFCV 60
          M TQKLF +S+   V FSCF SS+E DDLWNCVIPCSN+N D+LCNT CIEQD+GAGFCV
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCV 60

Query: 61 PKLPGISDKKVCCCNNG 78
          PKLPGISD KVCCCNNG
Sbjct: 61 PKLPGISDMKVCCCNNG 77

BLAST of PI0016409 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.4e-11
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDL-WNCVIPCSNHNEDLLCNTECIEQDQGAGFC 60
          M TQKL T+SI  +++F+C  S+ + D L  +CV PCS+  +D  C  +CI+++ GAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 VPKLPGISDKKVCCCN 76
           PKLP  S  K CCCN
Sbjct: 61 YPKLP--STDKDCCCN 74

BLAST of PI0016409 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-10
Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDL-WNCVIPCSNHNEDLLCNTECIEQDQGAGFC 60
          M TQKL T+SI  +V+F C VS+ + D L  +CV PC +  +D  C  +CI ++ GAGFC
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTKGDVLNVHCVRPCYDTYDDESCYNDCIRENLGAGFC 60

Query: 61 VPKLPGISDKKVCCCNN 77
           PKLP  S  K CCCN+
Sbjct: 61 YPKLP--STDKDCCCND 75

BLAST of PI0016409 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDLWNCVIPCSNHNEDLLCNTECIEQDQGAGFCV 60
          M T+KL  + +A  VL +CFV+  E   LWNC+ PCS   + L C  +C   ++G G C+
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGLWNCIRPCSETYKSLSCYVDCGALNKGTGACI 60

Query: 61 PKLPGISDKKVCCC 75
          PK P +SD+ VCCC
Sbjct: 61 PKRP-VSDEYVCCC 73

BLAST of PI0016409 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0

Query: 31 NCVIPCSNHNEDLLCNTECIEQDQGAGFCVPKLPGISDKKVCCCN 76
          +CV PCS+  +D  C  +CI ++ GAGFC PKLP  S  K CCCN
Sbjct: 11 HCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLP--STDKDCCCN 53

BLAST of PI0016409 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 4.9e-29
Identity = 60/77 (77.92%), Postives = 66/77 (85.71%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDLWNCVIPCSNHNEDLLCNTECIEQDQGAGFCV 60
          M TQKLF +S+   V FSCF SS+E DDLWNCVIPCSN+N D+LCNT CIEQD+GAGFCV
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCV 60

Query: 61 PKLPGISDKKVCCCNNG 78
          PKLPGISD KVCCCNNG
Sbjct: 61 PKLPGISDMKVCCCNNG 77

BLAST of PI0016409 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 1.7e-10
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDL-WNCVIPCSNHNEDLLCNTECIEQDQGAGFC 60
          M TQKL T+SI  +++F+C  S+ + D L  +CV PCS+  +D  C  +CI+++ GAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 VPKLPGISDKKVCCCN 76
           PKLP  S  K CCCN
Sbjct: 61 YPKLP--STDKDCCCN 74

BLAST of PI0016409 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 2.3e-10
Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDL-WNCVIPCSNHNEDLLCNTECIEQDQGAGFC 60
          M TQKL T+SI  +++ +C VS+ + D L  NCV PCS+  +D  C  +CI ++ GAGFC
Sbjct: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60

Query: 61 VPKLPGISDKKVCCCN 76
           PKLP  S  K CCCN
Sbjct: 61 YPKLP--STDKDCCCN 74

BLAST of PI0016409 vs. NCBI nr
Match: KAA0043464.1 (hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 3.9e-10
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDLWNCVIPCSNHNEDLLCNTECIEQDQGAGFCV 60
          M T+KL  + +A  VL +CFV+  E   LWNC+ PCS   + L C  +C   ++G G C+
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGLWNCIRPCSETYKSLSCYVDCGALNKGTGACI 60

Query: 61 PKLPGISDKKVCCC 75
          PK P +SD+ VCCC
Sbjct: 61 PKRP-VSDEYVCCC 73

BLAST of PI0016409 vs. NCBI nr
Match: KAG6586428.1 (hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0

Query: 1  MGTQKLFTLSIAAVVLFSCFVSSIEEDDLWNCVIPCSNHNEDLLCNTECIEQDQGAGFCV 60
          M ++KLFT+  A V++   F SS + D    C+ PC +  +D  C  +C+  ++GAGFC 
Sbjct: 1  MASRKLFTV-FAIVMMMFYFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCY 60

Query: 61 PKLPGISDKKVCCCNN 77
          PKLP ++++K CCCNN
Sbjct: 61 PKLPSVTNEKDCCCNN 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L1R82.3e-2977.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
A0A0A0LHG98.4e-1148.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1[more]
A0A0A0LJG51.4e-1049.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1[more]
A0A5A7TJH11.9e-1044.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LKF51.2e-0453.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN54497.14.9e-2977.92hypothetical protein Csa_012842 [Cucumis sativus][more]
KGN61228.11.7e-1048.68hypothetical protein Csa_006463 [Cucumis sativus][more]
KAE8651697.12.3e-1050.00hypothetical protein Csa_006343 [Cucumis sativus][more]
KAA0043464.13.9e-1044.59hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa][more]
KAG6586428.11.1e-0942.11hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016409.1PI0016409.1mRNA