PI0015846 (gene) Melon (PI 482460) v1

Overview


Name	PI0015846
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	CRM domain-containing protein
Location	chr01: 5784692 .. 5787803 (-)
RNA-Seq Expression	PI0015846
Synteny	PI0015846

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGAAGCAAGCAAAAATGGGGGCTTCGATAATCTCCGCTCACTCTCACTCTCTCCTTCTCCGGTCAGTCCCCTCCTCTTTCTCCACCTTCTTCTCTAAACCCTACGCCGCCGCCGCCATCTCCGCAGTTTGTTTCCATCAATTTAAACCCAATAGTCCAAACTTCCTCACTCGCGAATCTCCTCACTATTCCCGGCCTTTCACTCCCTCCGCATCCCTTTCCTTTTCTCGCTCCTTTTCCTCCACCATTTCCGATCCCTCCGTGGTCACATTTGATGAAGGCGACGATGAAATTGAAGACGAAGACGAAAGTGATTACGAAGATGAAGTTGAAATGGAAGGTTCCGTTGGGGATGGAATGGAAACCGGTGTGGCTTCCGAGCTGTCTTCGCCGATTGTGAATAGAAATGAAGTGAAGAATATTCCGAGCTTGGCGATTAAGGAGAAGAAGGAGCTGGCATCGTATGCTCATAGTTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTTAAGGTTTGTTTCTTCTTTCAACTTTTTCTTCTTTATTTGATTGAGTTATATTTTGGATGTTCTGATACTATCCATTAAGTCTATATTGTTTTAAGAATTAGGGTTTATAAATTAATCATTTGAAGGGAACCAGTGCTGTGGACATCAATTCTCTTTGCAAAAATTTCTTCTCTGCTTCTTGTAGAACTTGAATAGCAAGAACATTCCCGAACATAAAAGGGGAAATCGTCAGAAACAACCCTCAAATGTTTTCATCTTTAGCATTCTTTGAGAGAACTCCATGAAATAGTTGTTTTTGGTCCTTGCCACCCTTTGAGAGACTCGATGAAATAGTTTTTTTTCACTCCTGGCCGGTCGAGATCAAAGCACGACTCTAAACATAAACGGAAAATTGTAAAAAATACCCCTAAACAGTTTTCATCTTTGGTATCCTTTGAACTCGATGAAATAGTTTTTTTTTTCGGTCCTTGCAACCGTTTGAGAGAATTATAGTTTTCTGTCTTTGCCGGTCGAGATTGATGCCCGAGATTCGAATAGAAAATTCTCTTATTTTATTGTAGATCCAAACAATCATTTTTTGGTTTCTATAGAATCTCAATCAAGATGAACCGAGATTGTATTGATGTTTCCCAAATGGATCTCAGGTATTTAGTTAAGAGGACAACAATGTCCGTCTATATTTTCAAAAGAGTTTTCAGAAGGGTACTAGTTATGAAAGAAGAAAACCTTTTGAGGTTACTTCTGACAATTTCCTAACATAAACTGCTTGTATGTAGTTAAGAGGACAACAATGTCAATTACATTGGTTCTTGGAGAAAAGAAATTTGTCTCTTAGAAAATAAATTTCAATTGCTATTATAGAATGGTTGATTAACTACTAAGGGATGGAAAATGTTTGTATATATAACTGACTTCCACCATATGATTCAATTGATCATAGATTGAATTTGTTGATAGATAAGAAAGGGTTCTTTTCATTAATTTTGGGGTCCATGTTTTTATCATTGAAGAGAGAATCTTAGAAGTCATATATATAGTTCTCTTCCCTTTTTACGTTTTAAGTTCACAAAAGCTTAACTTTTGTTGTGGTCTTGCACTTCGCTCATGTTAAGTACCCCAAATTTATATTTAATGATTATTAGGGTATACAGATCCGTGTTATTATGACCCAGCCACATGTTTTCTAGGAAACCTAAACTCTGATTTGTTGGTTGAGTTTTCCTTTTAATTATTCTCTTTGCTTATTCTGATTGATTGAAGCTCTTATTATAGTTCTAGTTTGTCTCCCCTTTGTGTATGGGTTTATTTACACCCTTTCTATTCTTTATTCTTTCAATTTTTCCCAATAAGAACGAGTTTCTCGTTAAGAAAACAGTGACATTTCTGGTTGGTTGGTTTTGTTTATGAAGAGATATATATAGCATCTGGAACTTATCGAATTTCCATCTGTAAACTTGATTAATGGCTTCAATTATTTTATCATTCTCATTTAAATGTTGAACATTAGGAAATCCTTAGAACAAACTAGAATGAAAAAAATTGAACCACTCGATACAGATCAAAATTCTCGGAAACTGTCCAGAGGAGCTTGAGGATGTGGTTAGGAAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAGATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAAAAACGACGAGCCCGAAAAATTTATATGAGAAAAGAGCCTGATAGAGTCAAATCCATTTTGCAGGTAAAGTAAATGCATTGATATTCTTGATCTTTTCTCCAAAAAGTTTAATATTCTATTGCAAGTTCCATGAAAATCGTTAGAAATAACCTTCAAATGTTTTCATCTTTCACAACTAACATCCTTTTGGAGAACTTGTTAAAGTAGTTTTTCTTGGTCCTCCCTGGCTGAAATCGACCTAGAGATACGAGTAAAAATTTAACTTAGTTTCATTGTACATTTTTTGGACTTTTGTGGTGAAATCTCAGCCTAATGAAGACAAAGCTTGTATGTAATCTTTCCCAAGTTCGAATCTCGACCGGGAAGGACAAAAAAACAAAAAAACTATCACAACAAATTGCTAAAAAGAGTGTTAGTTGTGAAAGATGAAAACTTTTAGAGGCTATGTTTGTCAATTTCCCAAGTTCCCCCTTAAATTTGAATACTTGTATTACTGCAGAATAAAATAGAAACACCTCGAAGTTCAAACCGTGGTCGTCGTGGAACCAGCAGGTATATTAATCTGGAGTAGGATTCACATCTAGCAAGTTTATTTTGGAGGAACAAATTTTGAATTTTCATCCCAACGTAAGTTTTGTTCATACCATTCTTGTTCATGAAGTTCCACTAGTTTTGATTTAATTCATTAATGTAGAGATTTTCACTCTGCTTCCATTTCACAAGATTAGAGATTTAAACAAGATTATAGGGAGTGATAGAGTAAATTGACATAGAATATGAGTGCCTCAAAAGATGAAAACATTGGGAGTGATAGAGTAAATTGACATAGAATAT

mRNA sequence

CAAGAAGCAAGCAAAAATGGGGGCTTCGATAATCTCCGCTCACTCTCACTCTCTCCTTCTCCGGTCAGTCCCCTCCTCTTTCTCCACCTTCTTCTCTAAACCCTACGCCGCCGCCGCCATCTCCGCAGTTTGTTTCCATCAATTTAAACCCAATAGTCCAAACTTCCTCACTCGCGAATCTCCTCACTATTCCCGGCCTTTCACTCCCTCCGCATCCCTTTCCTTTTCTCGCTCCTTTTCCTCCACCATTTCCGATCCCTCCGTGGTCACATTTGATGAAGGCGACGATGAAATTGAAGACGAAGACGAAAGTGATTACGAAGATGAAGTTGAAATGGAAGGTTCCGTTGGGGATGGAATGGAAACCGGTGTGGCTTCCGAGCTGTCTTCGCCGATTGTGAATAGAAATGAAGTGAAGAATATTCCGAGCTTGGCGATTAAGGAGAAGAAGGAGCTGGCATCGTATGCTCATAGTTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTTAAGATCAAAATTCTCGGAAACTGTCCAGAGGAGCTTGAGGATGTGGTTAGGAAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAGATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAAAAACGACGAGCCCGAAAAATTTATATGAGAAAAGAGCCTGATAGAGTCAAATCCATTTTGCAGAATAAAATAGAAACACCTCGAAGTTCAAACCGTGGTCGTCGTGGAACCAGCAGGTATATTAATCTGGAGTAGGATTCACATCTAGCAAGTTTATTTTGGAGGAACAAATTTTGAATTTTCATCCCAACGTAAGTTTTGTTCATACCATTCTTGTTCATGAAGTTCCACTAGTTTTGATTTAATTCATTAATGTAGAGATTTTCACTCTGCTTCCATTTCACAAGATTAGAGATTTAAACAAGATTATAGGGAGTGATAGAGTAAATTGACATAGAATATGAGTGCCTCAAAAGATGAAAACATTGGGAGTGATAGAGTAAATTGACATAGAATAT

Coding sequence (CDS)

ATGGGGGCTTCGATAATCTCCGCTCACTCTCACTCTCTCCTTCTCCGGTCAGTCCCCTCCTCTTTCTCCACCTTCTTCTCTAAACCCTACGCCGCCGCCGCCATCTCCGCAGTTTGTTTCCATCAATTTAAACCCAATAGTCCAAACTTCCTCACTCGCGAATCTCCTCACTATTCCCGGCCTTTCACTCCCTCCGCATCCCTTTCCTTTTCTCGCTCCTTTTCCTCCACCATTTCCGATCCCTCCGTGGTCACATTTGATGAAGGCGACGATGAAATTGAAGACGAAGACGAAAGTGATTACGAAGATGAAGTTGAAATGGAAGGTTCCGTTGGGGATGGAATGGAAACCGGTGTGGCTTCCGAGCTGTCTTCGCCGATTGTGAATAGAAATGAAGTGAAGAATATTCCGAGCTTGGCGATTAAGGAGAAGAAGGAGCTGGCATCGTATGCTCATAGTTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTTAAGATCAAAATTCTCGGAAACTGTCCAGAGGAGCTTGAGGATGTGGTTAGGAAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAGATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAAAAACGACGAGCCCGAAAAATTTATATGAGAAAAGAGCCTGATAGAGTCAAATCCATTTTGCAGAATAAAATAGAAACACCTCGAAGTTCAAACCGTGGTCGTCGTGGAACCAGCAGGTATATTAATCTGGAGTAG

Protein sequence

MGASIISAHSHSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRESPHYSRPFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEMEGSVGDGMETGVASELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRYINLE

Homology

[Close]

BLAST of PI0015846 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.7e-08
Identity = 33/86 (38.37%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 142 KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDV 201
           K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L NC E+  DV
Sbjct: 5   KQKRFLRSKAHHLTPIFQ---VGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDV 64

Query: 202 VRKLEESTGSVVVNQIGRTVIIYRPS 228
              L + + S +V  IG T+++Y+ S
Sbjct: 65  AEALVKGSRSQLVQTIGNTIVLYKES 87

[Close]

BLAST of PI0015846 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.5e-06
Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 138 SLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEE 197
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E 
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 198 LEDVVRKLEESTGSVVVNQIGRTVIIYRPS 228
              +V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

[Close]

BLAST of PI0015846 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.5e-06
Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 138 SLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEE 197
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E 
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 198 LEDVVRKLEESTGSVVVNQIGRTVIIYRPS 228
              +V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

[Close]

BLAST of PI0015846 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.5e-06
Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 138 SLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEE 197
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E 
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 198 LEDVVRKLEESTGSVVVNQIGRTVIIYRPS 228
              +V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

[Close]

BLAST of PI0015846 vs. ExPASy Swiss-Prot
Match: P0AGK7 (RNA-binding protein YhbY OS=Shigella flexneri OX=623 GN=yhbY PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.5e-06
Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 138 SLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEE 197
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E 
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 198 LEDVVRKLEESTGSVVVNQIGRTVIIYRPS 228
              +V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

[Close]

BLAST of PI0015846 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.0e-127
Identity = 252/279 (90.32%), Postives = 261/279 (93.55%), Query Frame = 0


Query: 1   MGASIISAHSHSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRESPHYSR 60
           MGASIIS+HSHSLLLRS+PSSFSTFFSKP AAAAIS VCFHQFKP+S   LTRESPH+ R
Sbjct: 1   MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTLLTRESPHHYR 60

Query: 61  PFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEMEGSVGDGMETGVA 120
           PFTPSA LSFSRSFSSTISDPS V FDE DDEIED+DESDYEDEVEME  VGDG ETGVA
Sbjct: 61  PFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYEDEVEMEDEVGDGTETGVA 120

Query: 121 SELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETL 180
           SELSSPI++RNEVKNIPSL IKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETL
Sbjct: 121 SELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETL 180

Query: 181 EANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRA 240
           EANELLKIKILGNCPEELEDVVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRA
Sbjct: 181 EANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRA 240

Query: 241 RKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRYINL 280
           RK+YMRKEPDRVKSILQ KIETP+SSNRGRRGTSR INL
Sbjct: 241 RKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL 279

[Close]

BLAST of PI0015846 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.0e-126
Identity = 251/284 (88.38%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MGASIIS----AHSHSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRESP 60
           M ASIIS    +HSHSLLLRSVPSSFSTFFSKP A AA S VCFHQFKP+S  FLTR+SP
Sbjct: 1   MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAFSTVCFHQFKPSSSTFLTRKSP 60

Query: 61  HYSRPFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEMEGSVGDGME 120
           HYSRPFTPS SLSFSR FSST+S PS V FDEGDDEIED+DESDYEDEVEME SVGDG E
Sbjct: 61  HYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEMEDSVGDGTE 120

Query: 121 TGVASELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSF 180
            GVASELSSP++NRNEVKNIPSL IKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSF
Sbjct: 121 NGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSF 180

Query: 181 IETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEE 240
           IETLEANELLKIKILGNCPE+LEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEE
Sbjct: 181 IETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEE 240

Query: 241 KRRARKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRYINLE 281
           KRR+RKIY+RKEPDRVKSILQ K+ETPRSSNRGRRGTSRYINLE
Sbjct: 241 KRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE 284

[Close]

BLAST of PI0015846 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.3e-101
Identity = 218/287 (75.96%), Postives = 245/287 (85.37%), Query Frame = 0


Query: 1   MGASIISAHS-----HSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRES 60
           MGASI+S+ S     HSLLLRSVPSS STF  +P  +A ISA C HQFKPNS  FL R+S
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRP--SAVISAACSHQFKPNSSIFLIRQS 60

Query: 61  PHYSRPFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEME------G 120
           PH SR FTPSAS+SFSRSFSS IS  S V F E DD I+D+DESDYEDEVE+E       
Sbjct: 61  PHRSRSFTPSASVSFSRSFSSIISGTSAVGF-EDDDVIDDDDESDYEDEVEIEDFELEDN 120

Query: 121 SVGDGMETGVASELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVT 180
           +V DG+ET VAS+ SS +V+R+EVK+IPSL +KEKKELASYAHSLGKKLKSQLVGKSGVT
Sbjct: 121 TVEDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVT 180

Query: 181 PGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSIT 240
           PGLATSFIETLEANELLKIK+LGNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+
Sbjct: 181 PGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSIS 240

Query: 241 KMKAEEEKRRARKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRY 277
           KMKAEEEKRRARKIY+RKEPDRVK  LQNK++TPRSSNRGRRG+SR+
Sbjct: 241 KMKAEEEKRRARKIYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 284

[Close]

BLAST of PI0015846 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 4.5e-78
Identity = 158/166 (95.18%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 115 METGVASELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLAT 174
           METGVASELSSP++NRNEVKNIPSL IKEKKELASYAH LGKKLKSQLVGKSGVTPGLAT
Sbjct: 1   METGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLAT 60

Query: 175 SFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE 234
           SFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE
Sbjct: 61  SFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE 120

Query: 235 EEKRRARKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRYINLE 281
           EEKRR+RKIY+RKEPDRVKSILQ K+ETPRSSNRGRRGTSRYINLE
Sbjct: 121 EEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE 166

[Close]

BLAST of PI0015846 vs. ExPASy TrEMBL
Match: A0A6J1C409 (uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007723 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63
Identity = 138/187 (73.80%), Postives = 161/187 (86.10%), Query Frame = 0


Query: 98  ESDYEDEVEM------EGSVGDGMETGVASELSSPIVNRNEVKNIPSLAIKEKKELASYA 157
           +SDYE EV +      E S+G   +    S+LSS +VN +EVKN+PSL +KEKKELASYA
Sbjct: 9   DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 68

Query: 158 HSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGS 217
           HSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL NCP EL+D VR+LEESTGS
Sbjct: 69  HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 128

Query: 218 VVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYMRKEPDRVKSILQNKIETP--RSSNRG 277
           VVV+QIGRTVIIYRPSI+KMKAEE+KR+ARKIY+RKEPDRVKSILQNK++TP   +SNRG
Sbjct: 129 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 188

[Close]

BLAST of PI0015846 vs. NCBI nr
Match: XP_004148536.1 (uncharacterized protein LOC101213060 [Cucumis sativus] >KGN43169.1 hypothetical protein Csa_020174 [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 8.2e-127
Identity = 252/279 (90.32%), Postives = 261/279 (93.55%), Query Frame = 0


Query: 1   MGASIISAHSHSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRESPHYSR 60
           MGASIIS+HSHSLLLRS+PSSFSTFFSKP AAAAIS VCFHQFKP+S   LTRESPH+ R
Sbjct: 1   MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTLLTRESPHHYR 60

Query: 61  PFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEMEGSVGDGMETGVA 120
           PFTPSA LSFSRSFSSTISDPS V FDE DDEIED+DESDYEDEVEME  VGDG ETGVA
Sbjct: 61  PFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYEDEVEMEDEVGDGTETGVA 120

Query: 121 SELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETL 180
           SELSSPI++RNEVKNIPSL IKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETL
Sbjct: 121 SELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETL 180

Query: 181 EANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRA 240
           EANELLKIKILGNCPEELEDVVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRA
Sbjct: 181 EANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRA 240

Query: 241 RKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRYINL 280
           RK+YMRKEPDRVKSILQ KIETP+SSNRGRRGTSR INL
Sbjct: 241 RKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL 279

[Close]

BLAST of PI0015846 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo])

HSP 1 Score: 461.8 bits (1187), Expect = 4.1e-126
Identity = 251/284 (88.38%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MGASIIS----AHSHSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRESP 60
           M ASIIS    +HSHSLLLRSVPSSFSTFFSKP A AA S VCFHQFKP+S  FLTR+SP
Sbjct: 1   MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAFSTVCFHQFKPSSSTFLTRKSP 60

Query: 61  HYSRPFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEMEGSVGDGME 120
           HYSRPFTPS SLSFSR FSST+S PS V FDEGDDEIED+DESDYEDEVEME SVGDG E
Sbjct: 61  HYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEMEDSVGDGTE 120

Query: 121 TGVASELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSF 180
            GVASELSSP++NRNEVKNIPSL IKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSF
Sbjct: 121 NGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSF 180

Query: 181 IETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEE 240
           IETLEANELLKIKILGNCPE+LEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEE
Sbjct: 181 IETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEE 240

Query: 241 KRRARKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRYINLE 281
           KRR+RKIY+RKEPDRVKSILQ K+ETPRSSNRGRRGTSRYINLE
Sbjct: 241 KRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE 284

[Close]

BLAST of PI0015846 vs. NCBI nr
Match: XP_038888218.1 (uncharacterized protein LOC120078082 [Benincasa hispida])

HSP 1 Score: 431.0 bits (1107), Expect = 7.7e-117
Identity = 241/278 (86.69%), Postives = 254/278 (91.37%), Query Frame = 0


Query: 1   MGASIISAHSHSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRESPHYSR 60
           MGASIIS HSHSLLLRSVPSSFSTFFSKP AAAA +AVCF+QFKP S NF TRES H+SR
Sbjct: 1   MGASIISFHSHSLLLRSVPSSFSTFFSKPSAAAAAAAVCFNQFKPVSSNFFTRESSHHSR 60

Query: 61  PFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEM--EGSVGDGMETG 120
            F PS SLSF RSF+STIS PS   FDE DDEIEDEDESDYEDEVE+  E +V DGMETG
Sbjct: 61  SFIPSPSLSFPRSFASTISGPSEFRFDEDDDEIEDEDESDYEDEVEIEREEAVEDGMETG 120

Query: 121 VASELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIE 180
           VASELSS +VNRNEVKNIPSL IKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIE
Sbjct: 121 VASELSSLMVNRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIE 180

Query: 181 TLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKR 240
           TLEANELLKIKILGNCPEELED VRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE++KR
Sbjct: 181 TLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEKQKR 240

Query: 241 RARKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRY 277
           +ARKIY+RKE DRVKSILQNKI+TPRSSNRGRRG+SRY
Sbjct: 241 QARKIYVRKELDRVKSILQNKIQTPRSSNRGRRGSSRY 278

[Close]

BLAST of PI0015846 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-102
Identity = 220/293 (75.09%), Postives = 249/293 (84.98%), Query Frame = 0


Query: 1   MGASIISAHS-----HSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRES 60
           MGASI+S+ S     HSLLLRSVPSS STF S+P  +AAISA C HQFKPNS  FL R+S
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRP--SAAISAACSHQFKPNSSIFLIRQS 60

Query: 61  PHYSRPFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEME------- 120
           PH SR F+PSAS+SFSRSFSSTISD S V F E DD I+D+DESDYEDEVE+E       
Sbjct: 61  PHRSRSFSPSASVSFSRSFSSTISDTSAVGF-EDDDVIDDDDESDYEDEVEIEDEVEIED 120

Query: 121 -----GSVGDGMETGVASELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLV 180
                 +V DG+ET VAS+ SS +V+R+EVKNIPSL +KEKKELASYAHSLGKKLKSQLV
Sbjct: 121 FELEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLV 180

Query: 181 GKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVII 240
           GKSGVTPGLATSFIETLEANELLKIK+LGNCP ELEDVV++LEESTGSVVV++IGRTVII
Sbjct: 181 GKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVII 240

Query: 241 YRPSITKMKAEEEKRRARKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRY 277
           YRPSI+KMKAEEEKRRARK+Y+RKEPDRVK  LQNK++TPRSSNRGRRG+SR+
Sbjct: 241 YRPSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290

[Close]

BLAST of PI0015846 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-101
Identity = 218/287 (75.96%), Postives = 246/287 (85.71%), Query Frame = 0


Query: 1   MGASIISAHS-----HSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRES 60
           MGASI+S+ S     HSLLLRSVPSS STF  +P  +A ISA C HQFKPNS  FL R+S
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRP--SAVISAACSHQFKPNSSIFLIRQS 60

Query: 61  PHYSRPFTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEME------G 120
           PH SR FTPSAS+SFSRSFSSTISD S V F E DD I+D++ESDYEDEVE+E       
Sbjct: 61  PHRSRSFTPSASVSFSRSFSSTISDTSAVGF-EDDDVIDDDEESDYEDEVEIEDFELEDN 120

Query: 121 SVGDGMETGVASELSSPIVNRNEVKNIPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVT 180
           +V DG+ET VAS+ SS +V+ +EVKNIPSL +KEKKELASYAHSLGKKLKSQLVGKSGVT
Sbjct: 121 TVEDGLETAVASDSSSAVVSISEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVT 180

Query: 181 PGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSIT 240
           PGLATSFIETLEANELLKIK+LGNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+
Sbjct: 181 PGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSIS 240

Query: 241 KMKAEEEKRRARKIYMRKEPDRVKSILQNKIETPRSSNRGRRGTSRY 277
           KMKAEEEKRRARK+Y+RKEPDRVK  LQNK++TPRSSNRGRRG+SR+
Sbjct: 241 KMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 284

[Close]

BLAST of PI0015846 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37
Identity = 130/293 (44.37%), Postives = 168/293 (57.34%), Query Frame = 0


Query: 3   ASIISAH-SHSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRESPHYSRP 62
           AS  S H  H+LL    P S    F +P+  +A  +   H+ KP   +F ++  P +   
Sbjct: 8   ASCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSKPLPCH--- 67

Query: 63  FTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEME----GSVGD--GM 122
              SASL   +SFSS I +P +   +E +DE    +E +YEDE E +    G V    G+
Sbjct: 68  ---SASL-VVKSFSS-IDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERGI 127

Query: 123 ETGVASELSSPIVNRNEVK----------NIPSLAIKEKKELASYAHSLGKKLKSQLVGK 182
           E   ASE  S I ++ E            +   L+IKEKKELASYAHSLG KLK QLVGK
Sbjct: 128 EDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKLKCQLVGK 187

Query: 183 SGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYR 242
           SGVT  +  SF+ETLE NELLK+KI    P+ELED V+ LEE+TGSV V QIGRTVI+YR
Sbjct: 188 SGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYR 247

Query: 243 PSITKMKAEEEKRRARK--IYMRKEPDRVKSILQNKIE-TPRSSNRGRRGTSR 276
           PS TKMKAE +K+   +  I  R++    +     + E + R   RGRRG SR
Sbjct: 248 PSPTKMKAEAKKKEVERMSITRRQKYANTRPTKPFRREYSERPDGRGRRGGSR 292

[Close]

BLAST of PI0015846 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 152.5 bits (384), Expect = 4.9e-37
Identity = 119/258 (46.12%), Postives = 153/258 (59.30%), Query Frame = 0


Query: 3   ASIISAH-SHSLLLRSVPSSFSTFFSKPYAAAAISAVCFHQFKPNSPNFLTRESPHYSRP 62
           AS  S H  H+LL    P S    F +P+  +A  +   H+ KP   +F ++  P +   
Sbjct: 8   ASCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSKPLPCH--- 67

Query: 63  FTPSASLSFSRSFSSTISDPSVVTFDEGDDEIEDEDESDYEDEVEME----GSVGD--GM 122
              SASL   +SFSS I +P +   +E +DE    +E +YEDE E +    G V    G+
Sbjct: 68  ---SASL-VVKSFSS-IDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERGI 127

Query: 123 ETGVASELSSPIVNRNEVK----------NIPSLAIKEKKELASYAHSLGKKLKSQLVGK 182
           E   ASE  S I ++ E            +   L+IKEKKELASYAHSLG KLK QLVGK
Sbjct: 128 EDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKLKCQLVGK 187

Query: 183 SGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYR 242
           SGVT  +  SF+ETLE NELLK+KI    P+ELED V+ LEE+TGSV V QIGRTVI+YR
Sbjct: 188 SGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYR 247

Query: 243 PSITKMKAEEEKRRARKI 244
           PS TKMKAE +K+   ++
Sbjct: 248 PSPTKMKAEAKKKEVERM 257

[Close]

BLAST of PI0015846 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 143.7 bits (361), Expect = 2.3e-34
Identity = 101/217 (46.54%), Postives = 129/217 (59.45%), Query Frame = 0


Query: 36  SAVCFHQFKPNSPNFLTRESPHYS---------RPFTPSASLSFSRSFSSTISDPSVVTF 95
           S VC    +P S + L R+S H++         RP+   + L   +SFSS          
Sbjct: 24  SPVCLF-LRPFSVSLLGRKSSHHAWISSSLPLPRPYISFSPLLVPKSFSSV--------- 83

Query: 96  DEGDDEIEDEDESDYEDEVEMEGSVG----DGMETGVASELSSPIVNRNEVKNIPSLAIK 155
                   DE E D ED V +  S+     DG E G  SEL+   +  N   +   L+ K
Sbjct: 84  --------DESEQD-EDNVSLVASLNEINDDGQEDG--SELTMVSMRENRRSSALELSAK 143

Query: 156 EKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVV 215
           EK++LASYAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+KI   CP ELED++
Sbjct: 144 EKRKLASYAHHLGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKIHRTCPGELEDMI 203

Query: 216 RKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR 240
            +LEE+TGSV V QI RTVI+YRPS TK+KA+E+K+R
Sbjct: 204 LRLEEATGSVSVGQIARTVILYRPSPTKLKADEDKKR 219

[Close]

BLAST of PI0015846 vs. TAIR 10
Match: AT3G01370.1 (CRM family member 2 )

HSP 1 Score: 42.7 bits (99), Expect = 5.5e-04
Identity = 34/114 (29.82%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 114 GMETGVASELSSPIVNRNEVKN-IPSLAIKEKKELASYAHSLGKKLKSQLVGKSGVTPGL 173
           G  TG  S++S+    ++E    +  L+ +E+  L   A  + KK     VG+S V  GL
Sbjct: 849 GSSTGSGSQISALRERKSENDGLVTDLSNRERLILRKQALKM-KKRPPFAVGRSNVVTGL 908

Query: 174 ATSFIETLEANELLKIKILGNC-PEELEDVVRKLEESTGSVVVNQIGRTVIIYR 226
           A +     + N L  + + G      +++V+ KL+E TG+++V+Q    VI+YR
Sbjct: 909 ARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALLVSQEPSKVILYR 961

The following BLAST results are available for this feature:

BLAST of PI0015846 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P54454	4.7e-08	38.37	Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN...	[more]
P0AGK6	7.5e-06	33.33	RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1	[more]
P0AGK5	7.5e-06	33.33	RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 ...	[more]
P0AGK4	7.5e-06	33.33	RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 ...	[more]
P0AGK7	7.5e-06	33.33	RNA-binding protein YhbY OS=Shigella flexneri OX=623 GN=yhbY PE=4 SV=1	[more]

BLAST of PI0015846 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2C3	4.0e-127	90.32	CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV...	[more]
A0A1S3BJF7	2.0e-126	88.38	uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=...	[more]
A0A6J1I2Z3	1.3e-101	75.96	uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060...	[more]
A0A5D3DFJ1	4.5e-78	95.18	Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1C409	1.8e-63	73.80	uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of PI0015846 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148536.1	8.2e-127	90.32	uncharacterized protein LOC101213060 [Cucumis sativus] >KGN43169.1 hypothetical ...	[more]
XP_008448058.1	4.1e-126	88.38	PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]	[more]
XP_038888218.1	7.7e-117	86.69	uncharacterized protein LOC120078082 [Benincasa hispida]	[more]
XP_023529380.1	1.4e-102	75.09	uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]	[more]
KAG6588422.1	1.2e-101	75.96	hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0015846 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39040.1	2.2e-37	44.37	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G39040.2	4.9e-37	46.12	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT2G21350.1	2.3e-34	46.54	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G01370.1	5.5e-04	29.82	CRM family member 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 139..225 e-value: 1.3E-22 score: 91.1
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 142..225 e-value: 1.1E-15 score: 57.5
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 137..236 score: 16.597588
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 138..238 e-value: 6.0E-27 score: 95.5
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 139..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..280
None	No IPR available	PANTHER	PTHR47714:SF1	CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 7..275
None	No IPR available	PANTHER	PTHR47714	CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 7..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015846.1	PI0015846.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding