PI0015693 (gene) Melon (PI 482460) v1

Overview


Name	PI0015693
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr10: 10515014 .. 10520402 (-)
RNA-Seq Expression	PI0015693
Synteny	PI0015693

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCTTTGGCTGACAAAACCCTTACTGAAGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTAGCAACAGAGCATCCGAACTCGATAATTCATTGACTAAGGAGGTAAGTGAACTCAAATCACAAATGCTTAATATGACTACTCTACTACCTTTGTGCAAGGTGGATCTATTAAAGTTGCAAAATGCAGGGTATGCAGTGTAGTTGGACATCCTAATGACAAGTGTCCTGACCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAACGCCGGTTGGAGAGACAACCCTGATCTAAGATGGGGAAACGACAACCAAAGACCTGCACAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACTATCTCTTTTCAGAATGAAGTGAAACAACAGATGTCTCGTCTAACAAATGCCATAAGCAAATTAGAAGGAAAAGGCAAACTTCCGGCTCAGCCAGATCATGCCAACGTAAGTGCCATCTCGCTTAAAAGCGGTAAGATTCTGGAAACCCCTTCAAGCGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAGTTAGAAACTAGTTCTTTACCATCATCTTCTAAAGGTAAATCTCATGTCTTAGATTATTCTCCATATGTCCCTAAGGCCCTTTTTCCTTCCAGGTTAGTTCCTTAGAAGAAAGAGTCGCCTAAGGAAGAGGAACTTCTTGAGATGTTCAGAAAGGTGCAGATAAACCTACCTCTACTTGATGCTATCCAGCAAGTCCCAAGGTATGCGAAATTTCTCAAAGAGTTATGCACCAACAAGAGAAAAATCAAAGAAAAGCCGATGGTAAGTCACAACGTTTCTGCACTTCTTAAGAATTCAATTCCTGAGAAACAAAACGATCCAGGTATGTTTTCTCTTCCTTGTATTATAGGCAATAGGCCAATTCCCCATGCAATGCTTGACCTAGGAGCTTCTATTAATGTCATGCCTTATTCTGTGTTTAAAGATCTTGAATTAAATAACTTGCAAAAGACAAGTGTATGCATTCAACTAGCTGATTGATCTTTTATTTCACCGCTAGGAATAGTTGAAGATGTACTTGTTAAAATAGACAAATTAATTTTTCCTGCGGATTTCTATATTTTAGAAATGAATGATGCATGTGCAAAACCTTCTCATTCAATTCTTTTAGGAAGACCTTTCCTTAAGACTGCTAAAGCAATAATCGATGTAGATAAAAGTTGCCAAAATAGCTGGAGAATGTGCATCGACTATCGCAAACTCAATGAGGTAACGAAGAAAGATCCCTTTCCTTTACCTTTCTTAGATCAAATGATTGAACATTTAGCTGGTAGGTCGTATTTTTGCTTTCTAGACGGTTTTTCTGAATTTTACCAAATACCCATTGCATGCGAAGACCAAAGTAAAACAACCTTTACATGTGATTACGGTACTTATGCTTTTAGGCGTATGCCATTTGGTTTATGTAATGCGTCTGGCACATTCCAACGCTGTATGATGAGCATCTTTTCAGATTTTATAGAAAAATGCATAAAAGTCTTTATGGATGACTTTACTGTTTACGGTGATAATTTTGATGCATGCTTGAGTAGTTTAGAACAAATTTAAATAGATGCATAGAAACCAACTTGGTTCTGAATTATGAAAAATGTCATTTTATGGTTTCTCAAGGCATAGTTTTAGGCCATCTAGTTTCATCTAAAGGAATAGAAGTAGATAAAGCTAAAATCGACGTAATTCAAAAACTGCCTTATCCATAATGCTTAAAAGATGTTAGATCACTTATAGGCAGTGCCGGTTTTTACAGAATATTTATAAAATTTTTCTAGAATTGCTTTACCTCTAACTTCTCTTCTTCAGAAAGATGTGTCATTTATCATAGATGACAAATGCAAGAAAGCATTTGACGAGCTCAAGCTAAGGTTAGTATCTACTCCTATACTTCAATCTCCTAACTGGAATTTACCTTTTGAAATCATGTGTAATGCTAGCAACTTAGCAGTAGGAGCAGTTTTAGGACAAAGAGTAGATAAGAAATTGCATGCCATCTATTATGCATCTAAAACTTTAAATCAAGCACAATCAAATTACACCACAACAAAAAAAGAATTTCTTGCCATAGTCTTTGCATTAGATAAATTTAGAAGCTATGTGATAGGCTCTCCTGTTATCATTTACATTGACCACGCTGTAGTTAGGTATTTAATTTCTAAGAAAGAATCAAAACCTAGGCTAGTTAGATGGGTTTTGCTTTTACAAGAATTTAACCTAACAATAAAAGATAGAAAAGGAGCCAATAATGCCATAGCAGATCATTTAAGTAGAATAGTGCAAGAACCAGAAGACTTACCAATTAGAGAAGACTTTCCTTACGAACATCTCTTTCAAGCCAACACTCCAACACCATGGTACGCCGACTTAGTGAATTATATCACAACAGGTAACTTTCCTTCAGATTTTTCTTTCTCTAAAAAATCTAAACTGCGTAGTGATGCCAAGTATTATTTCTGGGAATCTCCCTATTTGTGAAAATATTGTTCTGATCAGATCATTAGAAAATGCGTTCCTGAGCATGAATATAATTCAATTCTATCGTTTTGTCATTCTCATGCATGCGGAGGTCATTTTAGTCCAAAAAGAACAGTTAGAAAAATTTTAGATAGCGGATTTTTCTGGAAAACCCTTTTTGCTGATTCTTATCAATTCTGTAAAGCATGTGACAACTGTCAAAGGACAGGATCTTTATCTAGGAGAAATGAAATGCCTTTAAACCCTATTTTAACTTGTGAAATATTTGATGTATGGGGCATGGATTTCATGGGTCCTTTTCCTTCTTCACATGGCTATCTCTATATATTACTAGCTGTTGATTATGTTTCAAAGTGGGTTGAAGCAATCCCCACTAGGACTAATGATTCTTCCGCTGTTTCAGGATTCCTCATTTCTAATATCTTTTCCAGATTTGGCATCCCTCGCGCAATCATAAGCGATCAAGGAACTTATTTTTGCAACAAAACCATTGAGGCCCTAATGAGAAAATACGAAGTCCATCACCATATTTCTACTCCTATCACCCTCAAGCCAATGGTCAAGCCGAGACCTCAAACAAAGAAATCAAGAGTATCTTGGAGAAAACAGTCAACATAAAAGACTGGAGCTTACGCTTGAACGATGCATTGTGGACATATCGAACGACCTACAAAACTCCTATTGGTACTTCTCCATTTAAACTTGTGTTTGGTAAGCCTTGCCATTTACCTGTAGAAATAGAACATAAAGCATATTGGACAGTTAGGCAATGCAATTATTCTCTCTTAGAGGCCGACAATAAAAGATTCCTTGACATGCTAGAATTAGAAGAATTAAGATTAGAAGCATATGAAAATTCTAGGATTTATAAAGAAAAGACCAAACTTTTGCATGATAAGAAAATCCTTAGAAAACAATTTCAAATAGGAAAAAAAATGCTTCTATATAATTCTTCTATCAATTTAATGCCTGGAAAGTTAAAATCTAAGTGGATTGGACCTTTTGTTATTACTGACTTTTCTACCTTTGGATAACTTTAAAAATTTTGCTTCACATGTTTTGCATAACACTTGCATGCCTTTAAGTATAGAAATACCCAAAAATGCATATCATATCTAAATTTCTCTTGAGCATCAAAAGTATAAACATGTTATATTACAAAAAGCATACTCCAAAAAAGAGAGAAAAATGAATATGCATAAAATTTTGCCTTACCCACGATATAGATTCCTAATCTTCATATCGCCTACTCCATCTCATTCATCTCTTTACTGCTTTCATCTTTCCTTTTTTTTTTCGCATACAGCAAACCCCCCCCATATTACTAACTATTTTCGTGTCTTGAAGCTATTCTATTTTACTTTAAACCTATCATCAATTAGAAAACGCAGTTTGCTCCCTTGGGTACGACAACTCTCTTCTCCAAATACTCCCGCTCGATCTAAACATCGACCAATAATCTTGATCCTCCTTTGGCTCCAAACCTTGATAGAAGCAATATGGGTGAAATTAGAGAAAAGACCCTTAGAGAGCTTGCCGAACCCGATGATGACCACTCAACCCTTTGAGTTAAAGTCAGGGCTCATCCATCTTTTGCCATCTTTAAGGGAAGTTCTAGTAAGGACCCGCATAAACATCTAAAGGATTTCCATATGGTTTGTGACTCCATGAAGCCTCACGGCATCTCGGAAGAACAACTTAATTTGCGAGGCTTTCATTTTTCCCTTATGGATGTAGTAAAGAGGTGGCTCAACTACTTAGAATCGGTTCCCATAACTACATGGGGTAGTCTAAAAAAGAAGTTCTTAGAGAAATTTTTCCTTGCCTCTAGGGAAAATAATATTAGGAAGGAAATATATGAGATAAGACAAGCCTTTAGTGTGTCCCTCTCGGAATATTGGGAAAGATTTAAAGAGCTTTGTGCTAGCTTCCCTCACCACCACATCTCCGACCCTTCTTTAATTCAATATTTCTATTTCGGTCTTTTGGCTTTTAATAGGAACATGGTAGATGCGGCGACAGGTGGAGCACTAGCCGACAAAACTCCTACCGAAGCAAGGGAGCTCATTTCTAGAATGACAGAGAATTCTCAAAGCTTTGGGAATAAGGTATCGGAACTTGACAACTTTCTGACAAAAGAGGTAAGCGAATTAAAATCTCAAATGTTAAATATGACAACTCTTTTTACTTTTTTTGTGCAAGGTGGTCCTCTCAAAGTAACAAAATGTGCAGTTTGTGGCTTGGTTGGACATCCAAATGACAAATGTCCCGAGTTGGTCGAGGATGTGAATGTTATTCAAAAATATGACCCCCACGGTAATACATACAATTCAGGATGGAGAGACAACCCAAACTTAAGATGGGGGAATGACAACCAAAAGCTCACACAAGCAACATCCTCCTCTTTAAACCAAGGTATGAATCTTGAAGACATTGTCAAAGCTTTAGTTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATTACTCAACTTACTACCGCCATAAGCAAGTTGGATGGGAAAAGCAAGCTTCCGACCCAACCGGACCATGTCAACGTGAGTGCTATCTCACTAAGGAGTAGTAAGATTCTTGACACCCTTACTAGTGAAGACAAAAAGGTAACTCCCAATCCTATCCCTCTTGAGAATAAGAAAAATGAGTCTAAAGAAGAAAAGATTGAAACAACTCCTTTACCATCTAATTCTAAAAATGATAAAATTCCCTCTTAA

mRNA sequence

ATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCTTTGGCTGACAAAACCCTTACTGAAGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTAGCAACAGAGCATCCGAACTCGATAATTCATTGACTAAGGAGGTAAGTGAACTCAAATCACAAATGCTTAATATGACTACTCTACTACCTTTGTGCAAGGTGGATCTATTAAAGTTGCAAAATGCAGGTGTAGTTGGACATCCTAATGACAAGTGTCCTGACCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAACGCCGGTTGGAGAGACAACCCTGATCTAAGATGGGGAAACGACAACCAAAGACCTGCACAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACTATCTCTTTTCAGAATGAAGTGAAACAACAGATGTCTCGTCTAACAAATGCCATAAGCAAATTAGAAGGAAAAGGCAAACTTCCGGCTCAGCCAGATCATGCCAACGTAAGTGCCATCTCGCTTAAAAGCGGTAAGATTCTGGAAACCCCTTCAAGCGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAGTTAGAAACTAGTTCTTTACCATCATCTTCTAAAGGTGGTCCTCTCAAAGTAACAAAATGTGCAGTTTGTGGCTTGGTTGGACATCCAAATGACAAATGTCCCGAGTTGGTCGAGGATGTGAATGTTATTCAAAAATATGACCCCCACGGTAATACATACAATTCAGGATGGAGAGACAACCCAAACTTAAGATGGGGGAATGACAACCAAAAGCTCACACAAGCAACATCCTCCTCTTTAAACCAAGGTATGAATCTTGAAGACATTGTCAAAGCTTTAGTTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATTACTCAACTTACTACCGCCATAAGCAAGTTGGATGGGAAAAGCAAGCTTCCGACCCAACCGGACCATGTCAACGTGAGTGCTATCTCACTAAGGAGTAGTAAGATTCTTGACACCCTTACTAGTGAAGACAAAAAGGTAACTCCCAATCCTATCCCTCTTGAGAATAAGAAAAATGAGTCTAAAGAAGAAAAGATTGAAACAACTCCTTTACCATCTAATTCTAAAAATGATAAAATTCCCTCTTAA

Coding sequence (CDS)

ATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCTTTGGCTGACAAAACCCTTACTGAAGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTAGCAACAGAGCATCCGAACTCGATAATTCATTGACTAAGGAGGTAAGTGAACTCAAATCACAAATGCTTAATATGACTACTCTACTACCTTTGTGCAAGGTGGATCTATTAAAGTTGCAAAATGCAGGTGTAGTTGGACATCCTAATGACAAGTGTCCTGACCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAACGCCGGTTGGAGAGACAACCCTGATCTAAGATGGGGAAACGACAACCAAAGACCTGCACAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACTATCTCTTTTCAGAATGAAGTGAAACAACAGATGTCTCGTCTAACAAATGCCATAAGCAAATTAGAAGGAAAAGGCAAACTTCCGGCTCAGCCAGATCATGCCAACGTAAGTGCCATCTCGCTTAAAAGCGGTAAGATTCTGGAAACCCCTTCAAGCGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAGTTAGAAACTAGTTCTTTACCATCATCTTCTAAAGGTGGTCCTCTCAAAGTAACAAAATGTGCAGTTTGTGGCTTGGTTGGACATCCAAATGACAAATGTCCCGAGTTGGTCGAGGATGTGAATGTTATTCAAAAATATGACCCCCACGGTAATACATACAATTCAGGATGGAGAGACAACCCAAACTTAAGATGGGGGAATGACAACCAAAAGCTCACACAAGCAACATCCTCCTCTTTAAACCAAGGTATGAATCTTGAAGACATTGTCAAAGCTTTAGTTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATTACTCAACTTACTACCGCCATAAGCAAGTTGGATGGGAAAAGCAAGCTTCCGACCCAACCGGACCATGTCAACGTGAGTGCTATCTCACTAAGGAGTAGTAAGATTCTTGACACCCTTACTAGTGAAGACAAAAAGGTAACTCCCAATCCTATCCCTCTTGAGAATAAGAAAAATGAGTCTAAAGAAGAAAAGATTGAAACAACTCCTTTACCATCTAATTCTAAAAATGATAAAATTCCCTCTTAA

Protein sequence

MDRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPLCKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKILETPSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKGGPLKVTKCAVCGLVGHPNDKCPELVEDVNVIQKYDPHGNTYNSGWRDNPNLRWGNDNQKLTQATSSSLNQGMNLEDIVKALVTNTLSFQQEMKQQITQLTTAISKLDGKSKLPTQPDHVNVSAISLRSSKILDTLTSEDKKVTPNPIPLENKKNESKEEKIETTPLPSNSKNDKIPS

Homology

[Close]

BLAST of PI0015693 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 2.6e-82
Identity = 166/240 (69.17%), Postives = 203/240 (84.58%), Query Frame = 0


Query: 2   DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNM 61
           DRNTVDA AGGALADK  TEARELIS+MAENSQ+F NRASELDNSLTKEVSELKSQMLNM
Sbjct: 83  DRNTVDAVAGGALADKAPTEARELISKMAENSQSFENRASELDNSLTKEVSELKSQMLNM 142

Query: 62  TTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPD 121
           TTLL        + + K    G+VGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNP+
Sbjct: 143 TTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNPN 202

Query: 122 LRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKG 181
           LRWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ E+KQQM++LT AISK++GKG
Sbjct: 203 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 262

Query: 182 KLPAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK 237
           KL AQ ++ANVSA+SL+SGKIL+TP++ E+K TS P+ L  K+E KEEK+ET+  P +SK
Sbjct: 263 KLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNSK 322

[Close]

BLAST of PI0015693 vs. ExPASy TrEMBL
Match: A0A5D3CB46 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00170 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 2.2e-81
Identity = 166/241 (68.88%), Postives = 205/241 (85.06%), Query Frame = 0


Query: 3   RNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMT 62
           RNT+D AAGGALADKT TEARELISRMAENS++F NRASELDNSLTKEVSELKSQMLNMT
Sbjct: 48  RNTLDVAAGGALADKTPTEARELISRMAENSESFGNRASELDNSLTKEVSELKSQMLNMT 107

Query: 63  TLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPDL 122
           TLL          + K    G+VGHPNDKCP ++E+ N++R+YDPHSNTYN+GWRDN +L
Sbjct: 108 TLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNLNL 167

Query: 123 RWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGK 182
           RWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ ++KQQM++LT AISK++GKGK
Sbjct: 168 RWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGKGK 227

Query: 183 LPAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSKG 239
           LPAQPDHANVSAISL+SGKIL+TP++ E+K+TS P+ L +K+E KEEK++ S    +++G
Sbjct: 228 LPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVD-SKKEGNTQG 287

[Close]

BLAST of PI0015693 vs. ExPASy TrEMBL
Match: A0A5A7SRF5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00500 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 3.7e-81
Identity = 165/240 (68.75%), Postives = 203/240 (84.58%), Query Frame = 0


Query: 2   DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNM 61
           DRNTVDAAAGGALA+K  TEARELISRMA+NSQ F NRASEL+NSLTKEVSELKSQMLNM
Sbjct: 237 DRNTVDAAAGGALANKIPTEARELISRMAKNSQRFGNRASELENSLTKEVSELKSQMLNM 296

Query: 62  TTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPD 121
           TTLL        + + K +  G+VGHPNDKCP+++EE N+++KYDP+SNTYN GWRDNP 
Sbjct: 297 TTLLTSFVQGTPLKVTKCRVCGLVGHPNDKCPEVIEELNIVKKYDPYSNTYNTGWRDNPI 356

Query: 122 LRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKG 181
           LRWGNDNQ+  QA ++S+NQ TNL+D++KALATNT+SFQ E+KQQM++LT  ISK++GKG
Sbjct: 357 LRWGNDNQKHTQAPTTSSNQSTNLKDIIKALATNTLSFQQEMKQQMTQLTTTISKMDGKG 416

Query: 182 KLPAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK 237
           KLPAQP+HANVS ISL+SGKIL+TPS+ E+KVTS P+ L +K+E KEEK+ET+   S+ K
Sbjct: 417 KLPAQPNHANVSVISLRSGKILDTPSTKEKKVTSIPLPLNSKNESKEEKVETNPSLSNPK 476

[Close]

BLAST of PI0015693 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 4.9e-81
Identity = 166/239 (69.46%), Postives = 202/239 (84.52%), Query Frame = 0


Query: 4   NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTT 63
           NTVDAA G ALADKT TEARELISRMA+N Q+F NRASE DNSLTKEVSELKSQMLNMTT
Sbjct: 150 NTVDAAVGRALADKTPTEARELISRMAKNFQSFGNRASEFDNSLTKEVSELKSQMLNMTT 209

Query: 64  LLPLCKVD-----LLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPDL 123
            L    V      + K    G+VGH N+KCP+++E+ N++R+YDPHSNTYN+GWRDNP+L
Sbjct: 210 TLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPNL 269

Query: 124 RWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGK 183
           RWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ E+KQQM++LT AISK++GKGK
Sbjct: 270 RWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKGK 329

Query: 184 LPAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK 237
           LPAQ DHANVSAISL+SGKIL+TP++ E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Sbjct: 330 LPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

[Close]

BLAST of PI0015693 vs. ExPASy TrEMBL
Match: A0A5D3CQR9 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1799G00090 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-80
Identity = 163/238 (68.49%), Postives = 198/238 (83.19%), Query Frame = 0


Query: 4   NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTT 63
           NTVDAAAGGALADKT T ARELISRMAENSQ+F N+ASELDNSL KEVSELKSQMLNMTT
Sbjct: 15  NTVDAAAGGALADKTPTGARELISRMAENSQSFGNKASELDNSLIKEVSELKSQMLNMTT 74

Query: 64  LLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPDLR 123
           LL        + + K    G+VGH NDKCP+++E+ N++R+YDPH NTYN+GWRDNP+LR
Sbjct: 75  LLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNPNLR 134

Query: 124 WGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKL 183
           WGNDNQ+   A S+S+ QGTNLED++KALATNT+SFQ E+KQQM++LT   SK++GKGKL
Sbjct: 135 WGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGKGKL 194

Query: 184 PAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK 237
            AQP HANVS ISL+SGKIL+TP+S E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Sbjct: 195 SAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 252

[Close]

BLAST of PI0015693 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 315.8 bits (808), Expect = 5.4e-82
Identity = 166/240 (69.17%), Postives = 203/240 (84.58%), Query Frame = 0


Query: 2   DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNM 61
           DRNTVDA AGGALADK  TEARELIS+MAENSQ+F NRASELDNSLTKEVSELKSQMLNM
Sbjct: 83  DRNTVDAVAGGALADKAPTEARELISKMAENSQSFENRASELDNSLTKEVSELKSQMLNM 142

Query: 62  TTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPD 121
           TTLL        + + K    G+VGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNP+
Sbjct: 143 TTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNPN 202

Query: 122 LRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKG 181
           LRWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ E+KQQM++LT AISK++GKG
Sbjct: 203 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 262

Query: 182 KLPAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK 237
           KL AQ ++ANVSA+SL+SGKIL+TP++ E+K TS P+ L  K+E KEEK+ET+  P +SK
Sbjct: 263 KLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNSK 322

[Close]

BLAST of PI0015693 vs. NCBI nr
Match: TYK07549.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.8 bits (800), Expect = 4.5e-81
Identity = 166/241 (68.88%), Postives = 205/241 (85.06%), Query Frame = 0


Query: 3   RNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMT 62
           RNT+D AAGGALADKT TEARELISRMAENS++F NRASELDNSLTKEVSELKSQMLNMT
Sbjct: 48  RNTLDVAAGGALADKTPTEARELISRMAENSESFGNRASELDNSLTKEVSELKSQMLNMT 107

Query: 63  TLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPDL 122
           TLL          + K    G+VGHPNDKCP ++E+ N++R+YDPHSNTYN+GWRDN +L
Sbjct: 108 TLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNLNL 167

Query: 123 RWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGK 182
           RWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ ++KQQM++LT AISK++GKGK
Sbjct: 168 RWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGKGK 227

Query: 183 LPAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSKG 239
           LPAQPDHANVSAISL+SGKIL+TP++ E+K+TS P+ L +K+E KEEK++ S    +++G
Sbjct: 228 LPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVD-SKKEGNTQG 287

[Close]

BLAST of PI0015693 vs. NCBI nr
Match: KAA0031967.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK16787.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 7.7e-81
Identity = 165/240 (68.75%), Postives = 203/240 (84.58%), Query Frame = 0


Query: 2   DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNM 61
           DRNTVDAAAGGALA+K  TEARELISRMA+NSQ F NRASEL+NSLTKEVSELKSQMLNM
Sbjct: 237 DRNTVDAAAGGALANKIPTEARELISRMAKNSQRFGNRASELENSLTKEVSELKSQMLNM 296

Query: 62  TTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPD 121
           TTLL        + + K +  G+VGHPNDKCP+++EE N+++KYDP+SNTYN GWRDNP 
Sbjct: 297 TTLLTSFVQGTPLKVTKCRVCGLVGHPNDKCPEVIEELNIVKKYDPYSNTYNTGWRDNPI 356

Query: 122 LRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKG 181
           LRWGNDNQ+  QA ++S+NQ TNL+D++KALATNT+SFQ E+KQQM++LT  ISK++GKG
Sbjct: 357 LRWGNDNQKHTQAPTTSSNQSTNLKDIIKALATNTLSFQQEMKQQMTQLTTTISKMDGKG 416

Query: 182 KLPAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK 237
           KLPAQP+HANVS ISL+SGKIL+TPS+ E+KVTS P+ L +K+E KEEK+ET+   S+ K
Sbjct: 417 KLPAQPNHANVSVISLRSGKILDTPSTKEKKVTSIPLPLNSKNESKEEKVETNPSLSNPK 476

[Close]

BLAST of PI0015693 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 1.0e-80
Identity = 166/239 (69.46%), Postives = 202/239 (84.52%), Query Frame = 0


Query: 4   NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTT 63
           NTVDAA G ALADKT TEARELISRMA+N Q+F NRASE DNSLTKEVSELKSQMLNMTT
Sbjct: 150 NTVDAAVGRALADKTPTEARELISRMAKNFQSFGNRASEFDNSLTKEVSELKSQMLNMTT 209

Query: 64  LLPLCKVD-----LLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPDL 123
            L    V      + K    G+VGH N+KCP+++E+ N++R+YDPHSNTYN+GWRDNP+L
Sbjct: 210 TLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPNL 269

Query: 124 RWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGK 183
           RWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ E+KQQM++LT AISK++GKGK
Sbjct: 270 RWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKGK 329

Query: 184 LPAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK 237
           LPAQ DHANVSAISL+SGKIL+TP++ E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Sbjct: 330 LPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

[Close]

BLAST of PI0015693 vs. NCBI nr
Match: TYK14267.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-79
Identity = 163/238 (68.49%), Postives = 198/238 (83.19%), Query Frame = 0


Query: 4   NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTT 63
           NTVDAAAGGALADKT T ARELISRMAENSQ+F N+ASELDNSL KEVSELKSQMLNMTT
Sbjct: 15  NTVDAAAGGALADKTPTGARELISRMAENSQSFGNKASELDNSLIKEVSELKSQMLNMTT 74

Query: 64  LLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPDLR 123
           LL        + + K    G+VGH NDKCP+++E+ N++R+YDPH NTYN+GWRDNP+LR
Sbjct: 75  LLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNPNLR 134

Query: 124 WGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKL 183
           WGNDNQ+   A S+S+ QGTNLED++KALATNT+SFQ E+KQQM++LT   SK++GKGKL
Sbjct: 135 WGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGKGKL 194

Query: 184 PAQPDHANVSAISLKSGKILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK 237
            AQP HANVS ISL+SGKIL+TP+S E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Sbjct: 195 SAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 252

The following BLAST results are available for this feature:

BLAST of PI0015693 vs.


Match Name	E-value	Identity	Description

BLAST of PI0015693 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CRR8	2.6e-82	69.17	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CB46	2.2e-81	68.88	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7SRF5	3.7e-81	68.75	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7VQ60	4.9e-81	69.46	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CQR9	5.4e-80	68.49	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of PI0015693 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047407.1	5.4e-82	69.17	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]
TYK07549.1	4.5e-81	68.88	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0031967.1	7.7e-81	68.75	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK16787.1 retrotranspos...	[more]
KAA0067359.1	1.0e-80	69.46	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos...	[more]
TYK14267.1	1.1e-79	68.49	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0015693 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 156..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 373..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015693.1	PI0015693.1	mRNA