PI0015515 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATAAAGAAAGAATTGTGGAAGTGATGTAAAGAGAAGTTAAGAAAGGAGCTTAAAATGGAGTTACCAAAATACTCGGCTTCTGTTATTCCCATTTTAGCTTCCAACACCCCATTCTCCCTCTTTCCTTCCCTCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTTTCATTTTCTGTGCAGAAGGCTTTGTTAATGTATTTTAATGGCTTCGGTAAGATTCTCTCTTCTTCTTCTATTCTAGATTCTCTCTTCTCCTTCTTCTATTCTATTTGAAATGCTATCGAATTTGATCCTTTCTGAAGATTTTGCAAAGTTCTTTGGGGAATGTGAATTGTGATAACGTAACATGTCTTAAAAGGAAAAACAAATCTATGTTATGGCTTAGCTATGGCGTTTTTATATTAGAAACGACATTTGCTTGTATCGAGCATGCATTTTCTCATTCTACCAATCGAATTACGGATATAAATCTATAATATGGCTTAGCTATGATGTTTTGTATTATTTTCTGGTAGAAAATAGAATTTTTGAATTTGTTGCCTATAAAACATTCGAAATGGGAAAGAATCTGGCATATATTTGGAATCTATTGTTTTGTTTTTCCTCTGTTGTGGGAACGATGATCATCATGAATTAGCTTCATTTACTTCTCCCTGACATACCTGCCTTGTTTGATACCCACATCAGCAGAATTTATTTCATTGCTTTCATAGAAATGAATGGCCAAAAGCAAGCACAAGATAGGGAGAGATCTACACATTAACATGGAACATTCTATGCAAGAGAAAAAGCAATGGAAGAACTGACTAATATGGCAATCACTAGTATAATTATGAATGAAAAAGCTCTGAGTTCTTGTACTTTTCTAATGTCTATAGCAGGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAACCCGGCATCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCGAATGAGGCTCCTGGGAATACAGCAGCAAAGGACAATACATCCAGACAAGAAGAGAATTATCAATATTCTCCCATGGTAAGTAATTTCACTAAGTTTACTTAGTCGGCCTGTGCACAGAAAACGCTAAGCAACTTATTAAAACATTATATTATATCATTGACTAAAACATCATAAAATGCTGGCTCGATGATCAAAATATCCATAAACTGAAGGGTTCGTCATCAATGTTAAATATCCATTGATATCTCAAATATTTTCTATAAATGTTCATAAAACATGAAAAATTTCATCTACTTAGTTCAATACGAATATGAATACCAACAACAATATCCATAATTGGGTTTGGAAGTAAAAACTTAATTATGAATCAAATAAACTTTATAATCTTTTTAATATTTACAAGAATATCCATCGATATCAATATCTTTTCGATATATCCATAAAATAGAAATCTCAATCTTGATTCCGACATTAATCCTAGACTCAACTTCGGCTTCATCTTCTTGCAATCTGGTTAGAATTAACTACAAATTTTTGTGCTTGGATGCAGAAAAAATGGTTTTGCTGTTTCTGA AATAAAGAAAGAATTGTGGAAGTGATGTAAAGAGAAGTTAAGAAAGGAGCTTAAAATGGAGTTACCAAAATACTCGGCTTCTGTTATTCCCATTTTAGCTTCCAACACCCCATTCTCCCTCTTTCCTTCCCTCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTTTCATTTTCTGTGCAGAAGGCTTTGTTAATGTATTTTAATGGCTTCGGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAACCCGGCATCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCGAATGAGGCTCCTGGGAATACAGCAGCAAAGGACAATACATCCAGACAAGAAGAGAATTATCAATATTCTCCCATGAAAAAATGGTTTTGCTGTTTCTGA ATGGCTTCGGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAACCCGGCATCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCGAATGAGGCTCCTGGGAATACAGCAGCAAAGGACAATACATCCAGACAAGAAGAGAATTATCAATATTCTCCCATGAAAAAATGGTTTTGCTGTTTCTGA MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF Homology
BLAST of PI0015515 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.2e-15 Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of PI0015515 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 2.1e-05 Identity = 27/69 (39.13%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of PI0015515 vs. ExPASy TrEMBL
Match: A0A0A0LDP9 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595220 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.5e-34 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of PI0015515 vs. ExPASy TrEMBL
Match: A0A5D3E371 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00620 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26 Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of PI0015515 vs. ExPASy TrEMBL
Match: A0A5J5AK52 (AvrRpt-cleavage domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_004861 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.3e-22 Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of PI0015515 vs. ExPASy TrEMBL
Match: A0A5J5BYY8 (AvrRpt-cleavage domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_004561 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20 Identity = 53/78 (67.95%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of PI0015515 vs. ExPASy TrEMBL
Match: A0A2P5B5J0 (RIN4, pathogenic type III effector avirulence factor Avr cleavage site OS=Parasponia andersonii OX=3476 GN=PanWU01x14_269930 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20 Identity = 54/76 (71.05%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of PI0015515 vs. NCBI nr
Match: KGN58221.1 (hypothetical protein Csa_017629 [Cucumis sativus]) HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of PI0015515 vs. NCBI nr
Match: XP_038883812.1 (protein NOI4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 141.4 bits (355), Expect = 3.1e-30 Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of PI0015515 vs. NCBI nr
Match: XP_038883820.1 (protein NOI4-like isoform X2 [Benincasa hispida]) HSP 1 Score: 141.4 bits (355), Expect = 3.1e-30 Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of PI0015515 vs. NCBI nr
Match: KAG6581070.1 (Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.8 bits (351), Expect = 9.0e-30 Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of PI0015515 vs. NCBI nr
Match: KAA0066959.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK30238.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 2.7e-26 Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of PI0015515 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 83.2 bits (204), Expect = 9.3e-17 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 0
BLAST of PI0015515 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-16 Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of PI0015515 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 81.6 bits (200), Expect = 2.7e-16 Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of PI0015515 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 80.9 bits (198), Expect = 4.6e-16 Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of PI0015515 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 79.0 bits (193), Expect = 1.8e-15 Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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