PI0015191 (gene) Melon (PI 482460) v1

Overview


Name	PI0015191
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr05: 131053 .. 133478 (+)
RNA-Seq Expression	PI0015191
Synteny	PI0015191

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTCTGGTTGTTTGCGAGTTGCGAGCCTTCAAGGTCGTCATTTATTTTTGTTGCAAGCTTCAGTTGGGTTTGTGGATTGTTTTTTAATTATAGAATTTAGGTTTATTGTTAAGGCTTTTAGGTAGAAAACCCTTGTAATAAATAGGACCTATGAAAAATGGAATAGTAATGATAATATCCCAAATATATATATTTATATATATATCAAGAGCTTTACCCACACCGGAAACTGAAAGCGAAAGCCCTTTGTTTGTTTATATCATATCCTCAATGCTTATGCCACCGAAAACAACCCAATCCCGTAATCCCAAACTCATACTCCCATTTCCTCTTTTTTTCCAAATATCCTCCTCTCCGATAATCATCAATTCCAATCATTTCCCAACTTCCTAAATCCTTAATCAACAAATAGGTTACTTTTTAAAATCTATTTTATTTCTATATTTTGTTGGATGTCAAAATCTAAACCTAAATATTCTATTTAATAGGAGAATAATGGGATCTATTGCACATTGATATCTCCATCATGTTTAAGTAGGAATCAATAATCTTAGAAATTTCTTTCTATTGTTAAATAATTGGACATGATGTAGCGCATTCATTTCAATTGTGAATTTCCTCAAAGAAAAAAAAAGTCAAATTAGTTGTCACTTTGAAGGAAGTTTATTAATCTACACCTCTCCTCATAGTATTGCCAAATTTCTTCCAGATATAATTAATGATTAGAAGTGAGAGAGTATGTCAAAATTGGAGTTTAGTACATTCCAATAATAAGGAAACGAACGAAGAGAGAAAAAATTTGTAAGAGTTTTTTTTTTTTTTTTGTAAATGTTTGAGAGTAAGAAAAAAGTAGAATCATTTCACTTGGTTTAGTGGAGGGGACAATTAAAGAAAGCCAAACAACTTTTCTAAATTTTCCTTTTGCAAAAACAGATATTACAAACAAATGCAATAAATTTTAGTGGAATTTTGAATTTGAATCATATTCCACGTGGCGAATGTACAAGTGTTTGGGAAAGTCAAGATTTGGATCTTCATAAAAAAAAAAAAGACATAGAACCAATCCCCTCCTAATTTCATGAATGCAGCAGAAATGGAAATAATAAATAGGAAATAACAGATGGGGGATATTTCATTATTAAATTTTTAATATTATTTTAGGGGTCCGTCTACAAGCGTGACTGTCAAATCTATATATTCTCTCTCTCTCTCTGCTTTTTTATTATTATTATTATTATTTTATATTTAGTTAATTAGTTTATTTATTTGTCCATCTCTTTCTCTTACTCTCTATCTAGATTTCTCAGAAGAGGTGTCTGTTCCGGAGATTCGATTTAATCGGCCATCTTTTTCCACTGCTCCTCGGGAATCAGACTCTTCCTCTTCCTCCTTCACTCCCTACAATATAATGTTCCAGATTTTCAAGGTACATCTTTTCATTTTTAACGCATAATTTTCTTTTATTTTCAGACCTTTCAAATTTTGTAATTATTACATAATAATCAAACTAAACAGCACCACTTTCTTTCTTCCCCTTCCCTTAAAAAATTAAAAAAAAAACACTGCGAGTGTCTGTGTTTTTGTTTGTAATTTTACTTAGTTGTACATACATTAAGATCTTCTATTTAGATAGTTTTAGAAAAGAAAACAATTAATTAATTTTGGTGTCCCCAGGTGTAGCGCCTGCAGTCATTAAATTATCTTCCCCTTTTAATCCTTTACTATTGTGAGAAGAATTTGAGATTGTTCTTTGATTATTTCTTCTGCTTTGTCTGAATTTGATTTAATACAGTACCCATTCAGATTTTGCTTAAATTAAATGGGGGATTCTCCTGTTTTTATTCTTTTTAAATAAATATAGTAGTTTGTTTATATGTTTACGAATTTCAAATATATTTAATTATAAATATAGAATATTAGATGAATAATGGCGTGGGTGTCTGTAGCCTTAGCTTCTCTGCATCATTGACTGGGTTTTTTGGTACTGTTTGGAGAGATTCTGAGCTCTAGGTGGGTATTCTCTCAGTACATTAAGAAAAAAAAGTTCCTTTTTATGGAAATGAGAATGGGATCTGCTTTTTCTTTCTACATCTCATTATCAAGTAATAATAAAATCTTTTTTTTATTTGTTTACATTAATAATAATTTCTCTCCTCTCATCATCCATGGAAATGGAGGTGATGATTTCTGCTACAGTTCTTGTCTCATGTGCAGAAACCCATTTTCTTTTTTTTTTTCCCTCTGTTTGGGGGTCATGTTAGTGAAAGGTTGTACAGATAAAGAAGATATGATTATGGTCGTTCATTATTATTATTTTTTAAAAAAGAAACATGCATATGTTGAATTAAATTATGCAAATTGTAACTAAAAAAACTCATTTTTTTATTTATTTAAAAAGGATTATTATTGGGGAAGTGATTAA

mRNA sequence

ATGTGCTCTGGTTGTTTGCGAGTTGCGAGCCTTCAAGGTCGTCATTTATTTTTGTTGCAAGCTTCAGTTGGGTTTGTGGATTATTTCTCAGAAGAGGTGTCTGTTCCGGAGATTCGATTTAATCGGCCATCTTTTTCCACTGCTCCTCGGGAATCAGACTCTTCCTCTTCCTCCTTCACTCCCTACAATATAATGTTCCAGATTTTCAAGGATTATTATTGGGGAAGTGATTAA

Coding sequence (CDS)

ATGTGCTCTGGTTGTTTGCGAGTTGCGAGCCTTCAAGGTCGTCATTTATTTTTGTTGCAAGCTTCAGTTGGGTTTGTGGATTATTTCTCAGAAGAGGTGTCTGTTCCGGAGATTCGATTTAATCGGCCATCTTTTTCCACTGCTCCTCGGGAATCAGACTCTTCCTCTTCCTCCTTCACTCCCTACAATATAATGTTCCAGATTTTCAAGGATTATTATTGGGGAAGTGATTAA

Protein sequence

MCSGCLRVASLQGRHLFLLQASVGFVDYFSEEVSVPEIRFNRPSFSTAPRESDSSSSSFTPYNIMFQIFKDYYWGSD

Homology

[Close]

BLAST of PI0015191 vs. ExPASy TrEMBL
Match: A0A0A0LKL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000200 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.3e-23
Identity = 64/77 (83.12%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MCSGCLRVASLQGRHLFLLQASVGFVDYFSEEVSVPEIRFNRPSFSTAPRESDSSSSSFT 60
          M SGCLRVASLQGRHLF LQAS      FSEEVS PEIRFNR SFSTAPRESD SSSSF+
Sbjct: 1  MHSGCLRVASLQGRHLFFLQAS-----DFSEEVSAPEIRFNRRSFSTAPRESD-SSSSFS 60

Query: 61 PYNIMFQIFKDYYWGSD 78
          PYNIMFQIFKD YWGSD
Sbjct: 61 PYNIMFQIFKDCYWGSD 71

[Close]

BLAST of PI0015191 vs. NCBI nr
Match: KGN60511.1 (hypothetical protein Csa_019415 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 8.9e-23
Identity = 64/77 (83.12%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MCSGCLRVASLQGRHLFLLQASVGFVDYFSEEVSVPEIRFNRPSFSTAPRESDSSSSSFT 60
          M SGCLRVASLQGRHLF LQAS      FSEEVS PEIRFNR SFSTAPRESD SSSSF+
Sbjct: 1  MHSGCLRVASLQGRHLFFLQAS-----DFSEEVSAPEIRFNRRSFSTAPRESD-SSSSFS 60

Query: 61 PYNIMFQIFKDYYWGSD 78
          PYNIMFQIFKD YWGSD
Sbjct: 61 PYNIMFQIFKDCYWGSD 71

The following BLAST results are available for this feature:

BLAST of PI0015191 vs.


Match Name	E-value	Identity	Description

BLAST of PI0015191 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKL4	4.3e-23	83.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000200 PE=4 SV=1	[more]

BLAST of PI0015191 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60511.1	8.9e-23	83.12	hypothetical protein Csa_019415 [Cucumis sativus]	[more]

BLAST of PI0015191 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015191.1	PI0015191.1	mRNA